LOCUS       DATGYW010000001         3573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_107120, whole genome shotgun sequence.
ACCESSION   DATGYW010000001 DATGYW010000000
VERSION     DATGYW010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3573
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107120"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            188..2455
                     /locus_tag="VK429_00005"
     CDS             188..2455
                     /locus_tag="VK429_00005"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF017076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HLN90220.1"
                     /translation="MLFVKSRLAPSAIFGLMIGIAGLGASLAPFGLYLEENIGLELLF
                     RLRGPRDAPRDVLIVAVDKASSDRLNLPNDLRKWPRSLHARLTDVLAKNGAAVIVFDI
                     FFEDPRPPPEDARFAESLRNSRNTILCERLQTEKVSVAGAGGGVPSHIGISKLVPPVP
                     SLAQSAAALAPFPLPKVPLKVSKNWTFKTGAGDTPTLPVVALQLFAMPVYDEFLRLLE
                     NANPPCAGQLPRDKAAAVAPGGVEKIVNAVRDAFESGPECAEKMFAGLEGARNLPEDR
                     ETRRMLLSLIRMYQSGNYQYLNFYGPPRTIPTIRYDQALELGGEGKAGSRSFDVQGKA
                     VFVGSSEILQQDQKDGFPTVYTQPDGLDLSGVEIAATAFANILENRPLRPQSFRAHVA
                     TIFLWGLAIGSLCRILNPAIATAATAGLCLLYLLVAHHQFAFGFWYPVVVPLFLQAPF
                     ALTAAIIWKYLDVKKERHNIRQAFAHYLPNDVVDRLAKKVADAKGGDQLVYGTCLATD
                     AERYTSLSESMQPQELGRFMNRYYEMVFAPVKKHRGAVSNVIGDSMLAIWVSLNPETT
                     QKKRACLAALEIASSIREVDGPVSDAKLPTRIGLHSGRILLGNIGAGDHYEYRPVGDI
                     VNTSTRIEGLNKHLGTRILASDEVVGKLGEFLTREIGSFRFVGKSMPVVVHELLCRKE
                     DADERLVGFCGKFADGLESFRRRSFDNAMKIFGETVRWAGGDGPSEFYLRLCEEYIQN
                     PPGESWDRAIQMDRK"
     gene            2546..>3573
                     /locus_tag="VK429_00010"
     CDS             2546..>3573
                     /locus_tag="VK429_00010"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HLN90221.1"
                     /translation="MKRFRAYRPGMSFCLAGVLSVFVFTASATASTCTQWVAKAVSVQ
                     GSVQAQRAGEEQPLPAKLNDTFCPGDKIRVEEGGRAVLLLSNETFLRLDQNTTIRFYE
                     PERERNFLLDLLDGAAYFISRTPKGFKCTTPYMNAGVEGTEFLLAVGNGKTSLSVFEG
                     TVLAENSFGALRLAGGQSAVAEEGKPPIVRIVARPRDAVQWTLYYPPIFPTGPPEPPP
                     GILGEWQSRVTRLLAVGRVDEAGGEIGEVLKKAPGDSTALALQSVIAVAQNDEEKAQA
                     LGRKAVETDPGSASARIALSYAQQAGFDLAGARTSVEEAVRLEPGNALAWARLSELRM
                     SFGNLDEAL"
BASE COUNT          671 a         1142 c         1109 g          651 t
ORIGIN      
        1 tcgataagcg atgatggcta ttcgcttgat ttttttttca aaacatgttt taaatcaaaa
       61 ccagttatcc cctacacacc gggtaagtgt cagcacgcca cggaatacgc catgaacctt
      121 cgcagggcga agaggtcatg aagaggatgg ttattccccg gttgcacctc gcgatgaccc
      181 gttcgcggtg ttgttcgtga aatcccgcct tgccccgtcc gcaatcttcg gtttgatgat
      241 cggcatcgcc ggacttgggg caagtctcgc cccctttggt ctctatctcg aggaaaacat
      301 cggtctggaa ttgctcttcc gcttgagggg accgagggat gccccgcggg atgtcctcat
      361 cgtcgcggtc gacaaggctt cctccgatcg tctcaatctt ccgaatgacc tgaggaagtg
      421 gccccgctcg cttcacgccc gactcacgga cgttctcgcg aaaaacgggg ccgccgtcat
      481 cgtcttcgac atttttttcg aagacccgcg ccccccgccc gaggatgcca ggttcgccga
      541 gtcgctccgg aactcccgga acacgatctt gtgcgaacgc ctccagacgg agaaggtgtc
      601 ggtggcgggc gccggaggtg gggtcccatc gcacatcggc atctcgaagc tcgtcccccc
      661 tgtcccatcc ctggctcaat ccgccgccgc cctggcgccc tttcccctgc ccaaggttcc
      721 cctcaaggtg agcaagaact ggacattcaa aacgggggcg ggggacaccc ctacgctgcc
      781 cgtggtcgcc ctccaactct tcgcgatgcc cgtttacgac gagttcctcc gactgctgga
      841 aaacgcgaac cctccctgcg ccgggcaact cccccgggac aaggccgcag cggtcgcacc
      901 gggaggcgtc gaaaagatcg tcaacgccgt acgcgacgcc ttcgagagcg ggccggagtg
      961 cgcggaaaag atgttcgccg gactggaagg cgcaaggaac cttccggagg atcgcgaaac
     1021 gaggcggatg ctcctttccc tcatccgcat gtaccagagc ggaaattacc aatacctgaa
     1081 tttctacggg cctccccgga cgatccccac catccggtac gaccaggcgc tggaactcgg
     1141 gggcgaaggc aaggccggga gcaggtcctt tgacgtgcag gggaaggccg tattcgtggg
     1201 atcgtcggaa atcctccagc aggaccagaa agacggcttc cccacggtgt acacgcagcc
     1261 ggacggtctg gatctcagcg gagtggagat cgccgccacc gcgttcgcca acatcctgga
     1321 aaaccgcccc cttcgaccgc agagtttccg cgcccatgtt gcgaccatct tcctctgggg
     1381 attggcgatc ggctcccttt gccggatact gaaccccgcc atcgccacgg cggccaccgc
     1441 gggactctgc ctcttgtacc tcctggtggc ccaccaccag ttcgccttcg ggttctggta
     1501 cccggtcgtc gtccccctgt ttctccaggc gccgttcgcc ctgacggccg ccataatctg
     1561 gaaatatctc gacgtgaaga aggagcgcca caatatccgc caggccttcg cgcattacct
     1621 ccccaacgac gtcgtggacc gtctggcgaa aaaggtggcg gacgcaaagg gtggagacca
     1681 gcttgtttac gggacgtgcc tggccacgga cgccgaacgg tacacttcct tgtccgaaag
     1741 catgcagccg caggaactcg gccgcttcat gaaccggtac tacgagatgg tcttcgctcc
     1801 cgtgaaaaaa catcgcggcg cggtgtcgaa cgtgatcggg gactccatgc tggccatttg
     1861 ggtatcgttg aatccggaaa ccacccagaa gaaacgggcg tgtctcgcgg cgctcgagat
     1921 cgcctcttcc atccgggagg tcgacggacc cgtctccgac gcgaagctgc cgacccggat
     1981 cggcctgcac tccggccgca tactgctcgg aaacatcggc gcgggcgacc attacgagta
     2041 ccgccccgtc ggggatatcg tcaatacgtc tacgaggatc gaggggctca acaagcacct
     2101 ggggacccgg atcctggcgt cggacgaggt ggtcggcaaa ctcggggaat tcctcacccg
     2161 ggagatcgga tcgttccggt ttgtcgggaa atccatgccc gtcgtcgtgc acgaactgct
     2221 ctgtcgcaag gaagatgccg atgaacggct ggtcggcttc tgcgggaaat tcgccgacgg
     2281 tctcgaatcg ttccgccggc ggtcgttcga caacgcgatg aagatcttcg gggaaaccgt
     2341 ccggtgggcg ggaggggacg gtccatcgga attctacctg cgcctttgcg aagagtacat
     2401 tcaaaatccc ccgggggaat cctgggaccg tgccatccag atggaccgga agtagttgaa
     2461 caggacaggg ggcagcgttt ccccaatgtg tacccaatct gtcacccctc acttgccatg
     2521 gtgggggaac atgggggagg aagccatgaa gcggtttcga gcctaccggc ccgggatgtc
     2581 attctgcctg gccggcgtcc tgtccgtttt cgtgttcacc gcctctgcaa cggcgtcgac
     2641 ctgcacccaa tgggtggcca aggcggtctc ggtccagggg tcggtccagg cccagcgggc
     2701 gggggaggag caacccctcc cggccaagtt gaacgacacc ttctgcccgg gggacaagat
     2761 ccgcgtcgag gagggaggcc gggcggtcct cctcctgtcg aacgagacct tcctgcggct
     2821 ggaccagaac acgacgatcc ggttctacga accggagagg gaacggaact ttctcctcga
     2881 cctgctggac ggtgcggcct atttcatctc ccggaccccg aagggcttca agtgcaccac
     2941 gccctatatg aacgccggcg tggagggaac ggaattcctg ctggcggtcg ggaacgggaa
     3001 gacctccctg tcggtcttcg agggaacggt gctggccgag aactcctttg gagccctccg
     3061 gctggcgggg ggacagtccg ccgttgccga ggagggcaag cctcccatcg tgcgcatcgt
     3121 cgcgcggccg cgtgacgccg tgcaatggac gctctactac cccccgatct tcccgacggg
     3181 tccgccagag cctcccccgg ggatcctggg tgaatggcaa tcccgggtca cccggttgct
     3241 tgccgtgggg cgcgtggacg aggccggagg ggaaatcggg gaggttctga aaaaagcgcc
     3301 gggagacagt acggcccttg cgcttcaatc cgtcatcgcc gttgcgcaga acgacgagga
     3361 gaaagctcag gcccttggac ggaaagccgt ggaaaccgac cccggctccg cttcggcgcg
     3421 gatcgctctc tcgtacgccc aacaggccgg cttcgacctt gcgggggcgc ggaccagcgt
     3481 cgaggaagcg gtgaggctgg aacccggcaa cgcgctggca tgggcgaggc tgtccgagct
     3541 gcggatgtcc ttcggcaacc tggacgaggc cct
//
LOCUS       DATGYW010000002         1768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_214313, whole genome shotgun sequence.
ACCESSION   DATGYW010000002 DATGYW010000000
VERSION     DATGYW010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214313"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..533)
                     /locus_tag="VK429_00015"
     CDS             complement(<1..533)
                     /locus_tag="VK429_00015"
                     /inference="COORDINATES: protein motif:HMM:NF015570.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HLN90222.1"
                     /translation="MTPPALAMRSRSAVWRRQFLLQGCWNYEGMQNVGFAYAILPALR
                     DFYANRPEEALKAVKRHLEFFNTQPAMGALILGATVRLEERVAAGEADPRSIGTFKVG
                     LMGSLGAIGDSFFWGALRPMASVAGALLALLHPLLGIAALLLLYNGVHLPLRRRGFTA
                     GMEGPEGAVGWLKQAAL"
     gene            complement(530..1228)
                     /locus_tag="VK429_00020"
     CDS             complement(530..1228)
                     /locus_tag="VK429_00020"
                     /inference="COORDINATES: protein motif:HMM:NF015566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HLN90223.1"
                     /translation="MAWRFLLAILLGGVCYLDRTAACQLMLHRPLVVATLMGAIFGNM
                     AAGAQVGVVLELIYLARLPVGASIPPDDTGAAVFGGSAAAIASSSIGLDAGSFTALLL
                     LSVVVAEAGKTADRFVRKVNVRIARITAESVDRGDMQAVEHGLLAGLTLFAVAGMALA
                     LVFSGAGVAVSKELLPRFGPSSRASFAILLPALPLLGAASAYSCSRTERTSAVFFLTM
                     AAVFGGTVLFRWAA"
     gene            complement(1231..1707)
                     /locus_tag="VK429_00025"
     CDS             complement(1231..1707)
                     /locus_tag="VK429_00025"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HLN90224.1"
                     /translation="MPLVLARIDCRLIHGQVVETWVPRTSADSLIVANDDLAGNPFLR
                     SVMELAVPPAIRVHFCRLDEAVRVLADAERNGERSILLVASAADAVTLRKAGAAFDLL
                     NIGNLHFAAGKVEISPSVFFAPEDFDALGWLRSHGVSVLVQGTPFEAGTSFDAEKE"
BASE COUNT          329 a          643 c          576 g          220 t
ORIGIN      
        1 ttgagcgccg cctgcttgag ccagcccacc gcgccctccg gtccctccat gccggcggtg
       61 aaaccgcgcc ggcgaagcgg caggtggacc ccgttgtaga ggagcaacag ggcggcgatc
      121 cccaggaggg gatggagcag cgcaaggagg gcccccgcca ccgaagccat cggccgcagg
      181 gcgccccaga agaaggagtc cccgatcgcc cccagcgacc ccatcagccc caccttgaac
      241 gtgccgatcg accgcggatc cgcctccccc gcggcgacac gttcctcgag gcggaccgtc
      301 gccccgagaa tcaacgcacc catcgccggc tgggtgttga aaaactcgag gtgccgcttc
      361 accgccttca gcgcctcctc cgggcggttc gcgtagaagt cgcgcagcgc cggcaggatg
      421 gcgtaggcga atccgacatt ctgcatcccc tcgtagttcc agcacccctg cagcaggaac
      481 tggcgccgcc agacggcact ccgggaccgc atcgcgagcg ccggcggcgt catgccgccc
      541 accggaacag cacggtgccg ccgaaaacgg ccgccatcgt caggaagaac accgcggagg
      601 tccgctccgt gcggctgcac gagtaggccg aggcggcacc caggagcgga agcgccggaa
      661 ggaggatcgc gaagcttgcg cggctggagg ggccgaaccg gggaagaagc tccttcgaca
      721 ccgccacgcc cgcccccgag aagacgaggg caagggccat ccccgccacg gcgaacaggg
      781 tgaggccggc gagcagcccg tgctccaccg cctgcatatc ccccctgtcc accgactccg
      841 ccgtgatgcg cgcaatccgc acgttgacct tccggacgaa acggtccgcc gtttttcccg
      901 cttccgcgac gacgacggag agcagcagga gggcggtgaa actccccgcg tcgagcccga
      961 tggaggagga ggcgatcgcg gcggccgaac cgccgaacac ggccgcgccc gtgtcgtcgg
     1021 gagggatcga ggcccccacg ggaagccggg ccaggtagat cagctcgagc acgaccccga
     1081 cctgggcgcc ggcggccatg ttcccgaaga tcgcgcccat cagcgtggcg acaacaaggg
     1141 gtcggtggag catcagctgg cacgccgccg tccggtcgag gtagcacacc cccccgagaa
     1201 gtatcgccag aaggaaccgc caggccacac ctactccttt tccgcgtcga acgatgttcc
     1261 cgcctcgaac ggcgtcccct ggacgaggac cgataccccg tgcgagcgca accacccgag
     1321 ggcatcgaaa tcctccggcg cgaagaacac ggacggggag atctcgacct tccccgcggc
     1381 gaagtggaga tttccgatat tcaggaggtc gaacgccgcc cccgccttcc ggagcgtgac
     1441 cgcgtccgcc gcgctggcga ccagcaggat ggagcgctcc ccgttccgct cggcgtcggc
     1501 gaggacgcga accgcctcgt cgaggcgaca gaaatggacg cggatcgccg ggggaaccgc
     1561 cagctccatc acggagcgca ggaaagggtt tcccgccagg tcgtcgttgg cgacgatcag
     1621 ggaatcggcg gacgtacggg gcacccatgt ctccactacc tgcccgtgga tcaaccggca
     1681 gtcgatccgg gcgagcacca ggggcatccc gctacttccc cggcttcttt tcgaccttct
     1741 tcttcagcat gtcccccgga atcatgat
//
LOCUS       DATGYW010000003         1509 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_375056, whole genome shotgun sequence.
ACCESSION   DATGYW010000003 DATGYW010000000
VERSION     DATGYW010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375056"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..890)
                     /locus_tag="VK429_00030"
     CDS             complement(<1..890)
                     /locus_tag="VK429_00030"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HLN90225.1"
                     /translation="MGSVSRDRKGRETGAAALRRRVAELSARLEEAEETLSAIQRGEV
                     DAVIVAEPAGNKVFTLQGADHAYRIFLEDMGEGAVTLTQGGLILYANRGFSEIVGAPL
                     EQVIGSTVFRFLSSSDGEVLRDSLTGAIAAGTRSEVSFESPRGRVPALLSLSVLPGSD
                     PPAHCMVVTDITDRKRAEEGLRRSREKLRNFSRRLQALLEEERTRISREIHDELGQSL
                     TALKLDLSLIRRKILSEGLAEQSGKVHEAELAVSRIIRTVREIATDLRPGILDELGVV
                     AAIKWMTKNFQNRTGISCKVT"
     gene            complement(893..1294)
                     /locus_tag="VK429_00035"
     CDS             complement(893..1294)
                     /locus_tag="VK429_00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015176308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circadian clock KaiB family protein"
                     /protein_id="HLN90226.1"
                     /translation="MVEKHTPSSLRKGGEKKKADTTEQFEKAVSRLGEGKYVLCLYVA
                     GMTPNSARAISNLKKICEEHLASQYDLNVIDVYRQPTLAKGEQIIAAPTLIKKLPLPI
                     RKLIGDMSDSGKVLVGLDIRIGSKRGRTSRR"
     gene            complement(1312..>1509)
                     /locus_tag="VK429_00040"
     CDS             complement(1312..>1509)
                     /locus_tag="VK429_00040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012255252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0048511 - rhythmic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="circadian clock KaiB family protein"
                     /protein_id="HLN90227.1"
                     /translation="CEEHLAGRYRIEVVDLLKNPQLAQGDQILAIPTLVRKLPEPIKK
                     IIGDLSDTLRVLVGLDIRPTS"
BASE COUNT          256 a          489 c          441 g          323 t
ORIGIN      
        1 gtaactttgc agcttattcc cgtccggttc tggaaattct tcgtcatcca cttgattgct
       61 gcgaccacgc caagttcatc cagtatcccg ggcctcagat cggtcgctat ctcccgcacc
      121 gtccggatga tgcggcttac ggcgagttcg gcctcgtgaa ctttcccgga ctgctcggca
      181 agtccctcgg agaggatttt tcttcttatc aacgagaggt ccaatttcaa ggccgtcaac
      241 gactgtccaa gttcgtcgtg gatttcgcgc gaaatgcgcg tcctctcttc ctcaagcagg
      301 gcttgcaggc gtctcgagaa gttgcgcagc ttctcgcggg atctcctgag cccctcctcc
      361 gcgcgcttgc gatcggtgat gtccgtgacg accatgcaat gggcaggcgg atcgctaccc
      421 ggcaacacac tgagggagag gagcgcggga actctcccgc gcggggattc gaacgacacc
      481 tcgctccggg tccccgcggc tattgcgccc gtcaacgaat cccgaagaac ctcgccatcg
      541 gaggaagaca ggaatcgaaa gaccgtactc ccgatgacct gctcgagcgg ggctccgacg
      601 atttcagaaa atccccggtt cgcgtagagg atcaggcccc cttgggtgag ggtcacggcc
      661 ccttccccca tgtcctcgag gaagatcctg tacgcgtggt cggcgccttg gagggtaaag
      721 accttgttcc ccgccggttc cgcgacgatg accgcatcca cctcgcccct ttggatggcc
      781 gaaagcgtct cctcggcttc ctcgagccgg gcggagagct ccgcgacccg gcggcgcaag
      841 gccgccgctc cggtctccct ccccttgcga tccctggaca cgctacccac attcacctcc
      901 gcgacgtacg ccctcttttt gacccgatcc tgatatcgag gccgacgagg accttgcccg
      961 agtccgacat gtcgccgatg agtttgcgta tcgggagggg aagcttcttg atcagcgtcg
     1021 gggcggcgat gatctgctcc cccttcgcaa gggtcggctg ccgatagacg tcgatcacgt
     1081 tgaggtcgta ctgactggcc aggtgctcct cgcagatctt cttgaggttc gagatggccc
     1141 gggccgagtt gggggtcata cccgcgacgt aaaggcaaag cacgtatttc ccctcgccca
     1201 ggcgggagac ggccttctcg aactgttccg tcgtatccgc tttcttcttc tcgccgcctt
     1261 tccggaggga ggatggagtg tgcttctcga ccatcttgag ctcctttcct gtcaggaggt
     1321 cgggcgtata tccaggccca cgaggacgcg gagcgtgtcg gaaaggtccc cgatgatctt
     1381 cttgatcggc tccggcaact tcctcaccag cgtcggaatg gccaggatct ggtcgccttg
     1441 ggcaagctgg ggattcttga ggaggtcgac cacctcgatc cggtaccggc ccgccaagtg
     1501 ctcctcgca
//
LOCUS       DATGYW010000004         1658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_160819, whole genome shotgun sequence.
ACCESSION   DATGYW010000004 DATGYW010000000
VERSION     DATGYW010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160819"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..581)
                     /locus_tag="VK429_00045"
     CDS             complement(<1..581)
                     /locus_tag="VK429_00045"
                     /inference="COORDINATES: protein motif:HMM:NF013909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HLN90228.1"
                     /translation="MSRRAAVTVNNVWRALDEHFPFAHCADWDNVGILLGDPDAPVRS
                     VLIALDATPAVIARLRRRPSDLLVTHHPVVFTPLKSVRPDPGPSAAVFALLRMGVAVI
                     SAHTNADAAPRGVSFVMGRRLGLRGIRPLIPGEPSSGACKIVVFVPPSHAEAVLGAAA
                     EAGGARIGAYSRCSFRTPGIGTFLGGPGSSPRFG"
     gene            complement(691..767)
                     /locus_tag="VK429_00050"
     tRNA            complement(691..767)
                     /locus_tag="VK429_00050"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(731..733),aa:Ile,seq:cat)
     gene            complement(843..>1658)
                     /gene="rpoD"
                     /locus_tag="VK429_00055"
     CDS             complement(843..>1658)
                     /gene="rpoD"
                     /locus_tag="VK429_00055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011555174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HLN90229.1"
                     /translation="ATVRKVEREAGLSAEQTQETLAAIERGERKVREAKRELVEANLR
                     LVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAI
                     ADQARTIRIPVHMIETINKLIRTSRYLVQELGREPNPEEIAERMDIPLEKVRKVLKIA
                     KEPISLETPIGEEEDSHLGDFIEDKNTASPVDSVINIDLAEQVDKVLGSLTPREERVL
                     RMRFGIGEKSDHTLEEVGQDFEVTRERIRQIEAKALRKLRHPSRSKRLRTFME"
BASE COUNT          263 a          568 c          543 g          284 t
ORIGIN      
        1 ccgaagcgcg gagaggaacc cggtcccccg aggaacgtgc cgattcccgg ggtccggaag
       61 gaacagcggg aatacgcgcc gatccgggct ccgcccgcct ccgcggcggc acccagaacg
      121 gcctccgcgt gggacggagg aacgaacacc acgattttgc acgcgccgga ggacggttcc
      181 cccggaatca gcgggcggat cccgcgcaac cccaggcggc gccccatcac aaacgaaaca
      241 ccccgcggag ccgcgtcggc gttggtgtgc gcggagatga ccgcgacgcc catccgcagg
      301 agggcgaaga ccgcggcgga gggaccgggg tccggacgga cggacttcag gggggtgaac
      361 acgacggggt ggtgcgtgac gaggaggtcg gaagggcgcc gtcgaaggcg cgcgatcacc
      421 gccggcgtgg cgtcgagggc gatgaggaca gaccgcacgg gagcgtcggg gtcgccgagc
      481 aggatcccga cgttgtccca gtcggcacag tgggcgaacg gaaaatgctc gtcgagcgcc
      541 cgccacacgt tgttcaccgt gaccgccgcg cggcggctca cgccggaacc tcgccgcagg
      601 gcctaaatga aaatgcaccg gtagccggtg catttcgtgc cgtgtccatt gcgggcccgc
      661 tcattccagg ccccatggcg acgtcgataa tggtgggccc acctggcctc gaaccaggga
      721 ccgaccggtt atgagccggt ggctctgacc aactgagcta tgggcccaac ccgaggaact
      781 ccaggtcatt ttttcattat cttccgcccg ttcccggggt gtcaacgccg ccggcacctt
      841 ccctactcca tgaaggtccg cagccgcttg ctccggctgg ggtggcgcag cttccggagc
      901 gccttcgcct cgatctggcg gatccgctcc cgggtcacct cgaagtcctg ccccacctcc
      961 tcgagggtgt gatcggattt ctcgccgatc ccgaaccgca tccggagaac ccgctcctcg
     1021 cgcggcgtaa ggctccccag caccttgtcc acctgctccg cgaggtcgat gttgatcacc
     1081 gaatccaccg gcgaagccgt gttcttgtct tcgatgaagt cgccaaggtg gctgtcctcc
     1141 tcctcgccga tcggcgtttc gagggagatc ggctccttgg cgatcttcag caccttgcgg
     1201 accttttcga gggggatgtc catccgttcg gcgatctcct ccgggttcgg ctcccgtccc
     1261 agctcctgca cgaggtaccg ggaggtccgg atgagcttgt tgatcgtctc gatcatgtgg
     1321 accgggatgc ggatggtccg cgcctggtcg gcgatcgcgc gcgtgatcgc ctggcggatc
     1381 caccaggtgg cgtaggtgga gaacttgtac ccccggcggt actcgaactt gtccaccgcc
     1441 ttcatcaggc cgatgttccc ctcctggatg agatccagga actggagccc ccggttggtg
     1501 tacttcttcg cgatcgagac caccaaccgg aggttcgcct cgaccagctc ccgcttggct
     1561 tcgcggacct ttcgctcccc ccgctcgatg gcggcgagcg tctcctgggt ctgctcggcg
     1621 gaaagccccg cctcccgttc caccttccgg acggtggc
//
LOCUS       DATGYW010000005         3067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_375259, whole genome shotgun sequence.
ACCESSION   DATGYW010000005 DATGYW010000000
VERSION     DATGYW010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375259"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2325)
                     /locus_tag="VK429_00060"
     CDS             complement(<1..2325)
                     /locus_tag="VK429_00060"
                     /inference="COORDINATES: protein motif:HMM:NF015655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HLN90230.1"
                     /translation="MSPIPRAGRNGPTADRLREIGVRETARVQSLLSELLRRLPREHA
                     GWDRICRAAVSAPDPDLFFLNLSRWVDSLPVAILTRAFSREDLLPLIGALLGGSEFIP
                     EQIARRPEIFEFLFLGDGVLRRPGPEALGQEALAAADRCATEEELKRDLRRMKHREVA
                     RIAARDLSGVAPLTEVTEDLSRLASAALEGAVRFSRRALDARLGAPIVIDPDGTRRPG
                     RFVVMGMGKLGALELNFSSDIDILYLYETDQGGTEGADRPVSLHEYFVRLGEAITRIV
                     SEATEDGFVFRVDLRLRPEGTRGELANSLRSAEIYYESWGQTWERAALIKACPVAGDL
                     SLGEEFLRSVVPFVYRKYLDFTAIEEIKGMKDRINLAVSRSRRDDRDVKLGLGGIREI
                     EFFAQAHRERQTHVLPQREEDLSRLARAMGLADPPALLSALDGHAAAVHGIYARLFGG
                     ARREESAGIPAGIQALFLHERAAEDAPSLLARLGFRDIEAAQRNLEVLRFGPPHIRVP
                     QRARHYLHKIGPEILDCVAKSPDPDLALAHVERFLSAIGARTMFYALLYEKPKVIEAL
                     VRLFGSSRFLSGFLLRHPELLDTFLRTDLSALVKSKSDLRTGLAEALTGCDDFEQELD
                     ELRRFKNLETLRIGIHDMAGSLSLEEGMFQLSALAEVLLSHAVFLAIREVRRRFGVAM
                     EAATGAAAFFCVLGMGKLGSEELSYHSDLDIIFLYSGPGESAPEPGRSGGDFRKLSNQ
                     EYFAKVAQRMISILTTSTREGLVYRLDTRLRPSGN"
     gene            complement(2322..>3067)
                     /gene="mtnA"
                     /locus_tag="VK429_00065"
     CDS             complement(2322..>3067)
                     /gene="mtnA"
                     /locus_tag="VK429_00065"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011521980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HLN90231.1"
                     /translation="IRRMQRRLDEMSGRPLTDIKLLLVKEALLMYAEDIAANEAMGKN
                     GAVLMPESGTVLTHCNAGALATAGYGTALGVIRAAVESGKKISVMADETRPFLQGSRL
                     TAWELMKDGIPCTLITDNMAASLFAAGKIDAAVVGADRVAANGDVANKIGTYGVAVLC
                     KAHKVPFYVAAPVSTIDLKLPTGKRIPIEERDPSEVTHLMGKRVAPHGVHVYNPAFDV
                     TPVRLVSAIVTEKGVLTPPIAGALRKLFR"
BASE COUNT          503 a         1053 c         1037 g          474 t
ORIGIN      
        1 gttcccagag ggtcgcagcc gcgtatcgag ccggtagacg agcccctccc gcgtcgaggt
       61 cgtcaggatc gagatcatcc gctgggcgac cttggcgaaa tattcctggt tggacagctt
      121 ccggaagtcg ccgccgcttc gcccgggctc cggggcgctc tcccccggac ccgagtaaag
      181 gaagatgatg tcgaggtcgc tgtgatagga caactcctcc gacccgagct tccccatccc
      241 gaggacgcag aagaacgccg ccgcccccgt cgccgcctcc atggcgacgc cgaaacgacg
      301 ccgcacctcg cggatcgcaa ggaacaccgc gtgggagagg agaacctccg ccagcgcgga
      361 gagctggaac atcccttcct ccagcgacag gctccccgcc atgtcgtgaa tgccgatccg
      421 cagcgtctcg aggttcttga agcgccgcag ttcgtccagc tcctgctcga agtcgtcgca
      481 ccccgtcagc gcctccgcaa ggccggtgcg caggtctgac ttcgacttca ccagcgcgga
      541 gaggtcggtc cgcagaaacg tgtccaggag ttccgggtgg cgcagcagga agccggaaag
      601 gaagcggctg cttccgaaca ggcgcacgag cgcctcgatg accttcggct tctcgtacag
      661 gagcgcgtag aacatcgtcc gcgccccgat ggcggagagg aaccgctcca cgtgggcgag
      721 cgcgaggtcg gggtcggggc tcttcgcgac gcagtcgaga atctcggggc cgatcttgtg
      781 caggtagtgg cgagcgcgct gggggacccg gatgtgggga gggccgaaac ggaggacctc
      841 caagttcctc tgcgccgcct cgatgtcgcg gaatcccagc cgcgcgagca gcgaaggggc
      901 atcctccgcg gcgcgttcgt gcaggaaaag cgcctggatc ccggcgggga tccccgccga
      961 ctcctcacgg cgcgcgccgc cgaagaggcg ggcgtagatc ccgtgaaccg ccgccgcgtg
     1021 gccgtcgagc gcggagagca gcgccggggg atcggcgagg cccatcgccc gcgccagccg
     1081 ggacaggtcc tcctcccgct ggggcaggac gtgggtctgc cgctcccggt gcgcctgggc
     1141 gaagaactcg atctcccgga tccccccgag ccccagcttc acgtcccggt cgtccctccg
     1201 ggaccgcgac accgcgaggt tgatccggtc cttcatcccc ttgatctcct cgatcgccgt
     1261 gaagtcgagg tacttgcggt agacgaaggg gacgacggac cggaggaact cctccccgag
     1321 ggagaggtcc cccgccacgg ggcacgcctt gatgagcgcc gcgcgctccc aggtctgccc
     1381 ccacgactcg tagtagatct cggcggagcg cagggagttg gcgagctctc cgcgtgtccc
     1441 ttcggggcgc agccgcaggt ccacccggaa cacgaagccg tcctccgtgg cttccgaaac
     1501 gatccgggtg atcgcctcgc ccaggcggac gaaatactcg tgcagcgaaa cgggtcggtc
     1561 ggcgccttcc gttcccccct ggtccgtttc gtagaggtag aggatgtcga tgtcggagct
     1621 gaagttcagc tcgagcgccc ccagcttccc catccccatc acgacgaatc gcccggggcg
     1681 tcgcgtcccg tcgggatcga tcacgatcgg cgcgccgagg cgcgcatcga gcgcccggcg
     1741 ggagaagcgg accgcccctt ccagcgccgc cgacgccagc cgtgaaagat cctccgtgac
     1801 ctcggtaaga ggggcgacgc cggagaggtc gcgcgccgcg atccgggcga cctcccggtg
     1861 cttcatccgg cgcaggtcgc gtttgagctc ctcctccgtc gcgcaccggt ccgcggccgc
     1921 cagggcctcc tgccccaacg cttccggccc gggacgccga agcaccccgt ccccgaggaa
     1981 gaggaactcg aagatctccg ggcgcctggc gatctgctcc gggatgaact cggagccccc
     2041 cagcaacgct ccgatcagcg ggagaaggtc ctcgcgggag aacgcccgcg taaggatagc
     2101 gacgggaagg gaatcgaccc accgcgacag gttgagaaag aaaaggtccg ggtcgggcgc
     2161 ggagacggcg gcgcggcaga tgcgatccca tccggcatgc tcccggggaa gccggcgcag
     2221 gagctcggag agcagcgact gtacgcgggc cgtctcccgg acgccgatct cccggaggcg
     2281 atcggcggtg ggaccgtttc tcccggcgcg ggggatcggg ctcaacggaa gagtttccgg
     2341 agggcgccgg cgatgggcgg ggtgaggacc cctttctcgg tcacgatggc ggaaacgagg
     2401 cggaccggcg tcacgtcgaa ggcggggttg tacacgtgga cgccgtgggg cgcgacccgt
     2461 ttccccatca ggtgcgtcac ctcggaggga tcgcgctcct cgatcgggat ccgtttcccg
     2521 gtcggaagct tcaggtcgat cgtcgacacc ggggcggcca cgtagaacgg gaccttgtgc
     2581 gccttgcaca ggacggcgac accgtacgtc ccgattttgt tcgccacatc cccgttcgcg
     2641 gcgacgcggt ccgcgccgac cacggcggcg tcgatctttc cggcggcgaa cagggacgcg
     2701 gccatgttat ccgtgatcag ggtgcacggg atgccgtcct tcatcagttc ccacgcggtc
     2761 aggcgggaac cttggaggaa gggccgcgtc tcgtcggcca tcacgctgat cttcttgccg
     2821 ctctccacgg cggcacggat gacgcccagc gctgtaccat atcctgccgt tgccagcgca
     2881 ccggcattgc aatgcgtcag cacggtgccg gattccggca tgagtaccgc gccgtttttg
     2941 cccattgctt cgttcgccgc gatgtcttcc gcgtacatca gcaacgcttc tttcaccagg
     3001 agcaacttga tgtccgtcag cggacgtccc gacatctcgt ctaatctccg ttgcatgcgt
     3061 cgaatgg
//
LOCUS       DATGYW010000006         3133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_375393, whole genome shotgun sequence.
ACCESSION   DATGYW010000006 DATGYW010000000
VERSION     DATGYW010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3133
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375393"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VK429_00070"
     CDS             <1..272
                     /locus_tag="VK429_00070"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012532377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HLN90232.1"
                     /translation="GDEVDYLYEPSREEILAKLLPKYVETMIFRILLESVAGEHGARM
                     TAMDSATNNSVDMIARLTLQMNRARQATITTELTEIVSGAEALKG"
     gene            319..1731
                     /gene="atpD"
                     /locus_tag="VK429_00075"
     CDS             319..1731
                     /gene="atpD"
                     /locus_tag="VK429_00075"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020678222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HLN90233.1"
                     /translation="MNKGNIVQVIGPVVDVRFEAEHLPALYNAIRISNPSISDKEGNL
                     VVEVAQHLGDNVVRCVAMDSTDGLVRGMEAIDTGDPIMIPVGPETLGRIMNVIGEPVD
                     EGGVITTKLRYPIHRPAPSFDEQSTKVEILETGIKVVDLLAPYSKGGKVGLFGGAGVG
                     KTVVIMELIHNIAKEHGGYSVFGGVGERTREGNDLWLEMKESKVLEKACLVYGQMNEP
                     PGARLRVGLSALTAAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQP
                     TLSTEMGNLQERITSTKKGSITSVQAIYVPADDLTDPAPATAFSHLDATTVLSRQIAE
                     LGIYPAVDPLDSTSRILSPLVIGEDHYAVARSVQKVLQKYKDLQDIIAILGMDELSED
                     DKILVARARKIQRFLSQPFFVAEQFTGIPGKYVRLEETVRSFKEIVDGKHDELPEQAF
                     YMVGTIEEAIEKGKKLLATV"
     gene            1747..2154
                     /locus_tag="VK429_00080"
     CDS             1747..2154
                     /locus_tag="VK429_00080"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011342925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HLN90234.1"
                     /translation="MASTIRLELVTPERLVLSEEVDEIVLPGYEGEFGVLPGHTQYLA
                     ILNIGMLWYRKGSAKTRMALGGGFAEVNHDRVVVMADTAERGDEIDVERAQRARDRAE
                     ARLKELSLDDETYAKAYAELQRALVRMAASGGE"
     gene            complement(2164..2769)
                     /locus_tag="VK429_00085"
     CDS             complement(2164..2769)
                     /locus_tag="VK429_00085"
                     /inference="COORDINATES: protein motif:HMM:NF041621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MXAN_5187 C-terminal domain-containing protein"
                     /protein_id="HLN90235.1"
                     /translation="MKRDDDRQETSLQGFSRGGKGTTVADESKGMLDRLELDLLALKH
                     EYDLFFNGKRRSEPMKERKELETKLLVGSRRTMVGNADQLRFNNLSGRYWTYANLWTR
                     TVRDLEEGRMHRDSGGKVKRVSGEQREPLVDQEHVDRAAEALLEARRSCGLAVDPSDL
                     PSLRETLYARAREISASSGGKKVEFLVSVEEGKPKVKAVLR"
     gene            2796..>3133
                     /locus_tag="VK429_00090"
     CDS             2796..>3133
                     /locus_tag="VK429_00090"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HLN90236.1"
                     /translation="MKGISAIILAAGQGKRMKSSLPKVAHLVLGKPVVWHVAQAARAA
                     GIREMVFVLGYGRDKILPVVEEFGGKVAIQESQFGTGDAARCGLAELSAGAKEVVVLC
                     GDAPLLRPAT"
BASE COUNT          567 a         1020 c         1029 g          517 t
ORIGIN      
        1 gcggagacga agtcgactac ctgtacgagc cttcccggga ggagatcctt gcgaagctgc
       61 tgccgaagta cgtggagacg atgatcttcc gcatcctcct cgaatcggtg gcgggggagc
      121 atggggcccg gatgacggcg atggattcgg cgacgaacaa ctccgtcgac atgattgccc
      181 ggctcacgct gcagatgaac cgcgcacggc aggcgacgat caccaccgag ctcaccgaga
      241 tcgtcagcgg cgccgaggcg ttgaaagggt aggcgtccgg tttcaccgtt tctcccagaa
      301 acaggaggcg aagggatcat gaacaaggga aacatcgtgc aggtcatcgg gcccgtggtc
      361 gacgtccggt tcgaggccga gcatctgccg gcgctctaca acgcgatccg gatctccaac
      421 ccgagcatca gcgacaagga agggaacctc gtcgtcgagg tcgcccagca cctgggcgac
      481 aacgtcgtcc gctgcgtcgc gatggactcg accgacggac ttgtccgcgg catggaagcg
      541 atcgatacgg gcgatccgat catgatcccc gtcggtcccg agaccctggg ccggatcatg
      601 aacgtgatcg gcgagccggt cgacgagggc ggcgtgatca cgaccaagct ccgctacccg
      661 atccaccgcc ccgcaccttc cttcgacgag cagtccacca aggtcgagat cctcgagacg
      721 gggatcaagg tcgtcgacct cctcgccccc tactcgaagg gaggaaaggt cggcctgttc
      781 ggcggcgccg gcgtgggcaa gaccgtcgtc atcatggagc tcatccacaa catcgccaaa
      841 gagcacggcg gctactccgt gttcggcggc gtcggcgagc gcacccgcga gggaaacgac
      901 ctctggctcg agatgaagga gtcgaaggtc ctcgagaagg cgtgtctggt gtacggccag
      961 atgaacgagc cgccgggcgc gcgcctccgg gtgggactgt cggccctcac cgccgcggaa
     1021 tatttccgcg acgaggaggg gcaggacgtc ctcctcttca tcgacaacat cttccggttc
     1081 acccaggccg gttccgaagt gtcggccctc ctgggccgca tcccgtcggc ggtcggctac
     1141 cagccgacgc tgtccaccga gatggggaac ctgcaggaac ggatcacttc gaccaagaaa
     1201 ggctcgatca cctcggtcca ggcgatctac gtccccgccg acgacttgac cgacccggcg
     1261 ccggcgaccg ccttctcgca cctggacgcc accacggttc tgtcccgcca gatcgccgag
     1321 ctcgggatct accccgcggt ggatcccctg gattcgacct cgcggatcct ttcgcctctg
     1381 gtcatcgggg aggatcacta cgcggtcgcc cgctcggtgc agaaggtcct ccagaagtac
     1441 aaggacctgc aggacatcat cgcgatcctg gggatggacg agctctccga ggacgacaag
     1501 atccttgtcg cccgggcgcg gaagatccag cggttcctgt cgcagccgtt cttcgtcgcc
     1561 gagcagttca ccggcatccc gggcaagtac gtgcggctcg aggaaacggt ccggtcgttc
     1621 aaggagatcg tcgacggaaa gcacgacgag ctgccggagc aggccttcta catggtcggc
     1681 accatcgagg aggcgatcga gaagggcaag aagcttctgg cgacggtgta actggagagc
     1741 gacgcgatgg catcgacgat ccgcctggaa ctggtcaccc ccgaacgcct cgtcctctcg
     1801 gaggaggtgg acgaaatcgt cctccctggc tacgagggcg agttcggggt gctcccgggc
     1861 cacacccaat acctggcgat cctgaacatc gggatgctgt ggtaccggaa ggggagcgcg
     1921 aagaccagga tggcgttggg cggcggattc gccgaggtga accacgaccg ggtcgtggtg
     1981 atggccgaca cggcggagcg tggcgacgag atcgatgtgg agcgcgcgca gcgcgccagg
     2041 gaccgcgccg aggcccgcct gaaagagctg tcgctggacg atgaaacata cgcgaaggcg
     2101 tatgcggagc tgcagcgcgc gctggtgcgg atggcggcga gcggcgggga ataatcctcc
     2161 cggctaccgc aacaccgcct tcaccttcgg tttcccctcc tcgacgctca cgagaaactc
     2221 caccttcttt cctccggagg acgccgagat ctcgcgcgcc cgtgcgtaga gcgtctcccg
     2281 gagcgacggg aggtccgacg ggtcgacggc cagaccgcac gagcgccggg cttccagcag
     2341 cgcttccgcc gcccgatcga cgtgctcctg gtccaccaac ggctccctct gttcccccga
     2401 cacccgcttg accttccccc cggagtcgcg gtgcatccgt ccttcctcga ggtcccgtac
     2461 cgtccgcgtc cagaggttgg cgtaggtcca ataccggccc gagaggttgt tgaaccgaag
     2521 ctggtccgcg ttcccgacca tcgtccggcg gcttccgacc aggagcttcg tctccagctc
     2581 ctttcgttcc ttcatcggct cggaccgccg cttcccgttg aagaagagat catactcgtg
     2641 cttgagggcg aggaggtcca gctccagccg gtccagcatc cccttcgatt cgtccgccac
     2701 ggtcgttccc tttcccccac gggagaaacc ttgtagactg gtctcctgcc ggtcgtcatc
     2761 gcgcttcatt gtagcatcgg gagaaggggg cgttcatgaa agggatttca gcgatcatcc
     2821 tggcggcggg gcaaggcaag cggatgaaat cctcgctccc caaagtggcg cacctcgtcc
     2881 tcggcaaacc ggtggtatgg cacgtcgcgc aggcggcgcg agccgcgggg atccgcgaga
     2941 tggtcttcgt cctcgggtac ggccgggaca agatcctccc cgtcgtggag gagttcggcg
     3001 ggaaggtggc gatccaggag agccagttcg ggaccggtga cgcggcacgg tgcggcctgg
     3061 ccgaactttc cgcgggggcg aaggaagtcg tggtgctttg cggggacgcc ccgctcctgc
     3121 ggcctgcgac gat
//
LOCUS       DATGYW010000007         4212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_321971, whole genome shotgun sequence.
ACCESSION   DATGYW010000007 DATGYW010000000
VERSION     DATGYW010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4212
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321971"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..893)
                     /locus_tag="VK429_00095"
     CDS             complement(<1..893)
                     /locus_tag="VK429_00095"
                     /inference="COORDINATES: protein motif:HMM:NF039894.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF512 domain-containing protein"
                     /protein_id="HLN90237.1"
                     /translation="MRDGAATRTSRNGVRVEAVTPGSPAERAGIVAGDRILSVSDHPV
                     EDLLDLHFLTSRNRFTLAWRDASGAGRKKEFRLRGETPGIFPEPIRVRRCRNRCIFCF
                     VHQLPKGLRRSLYVKDEDVRLSFLHGQYVTFSDLSEEETAKIVRYRLSPLYVSIHTTD
                     PELRRRMLGNPRVNDVMAVMRRLIRHGIALHGQIVVCPGLNDGSELVRSLRELSGLRP
                     GLRTVAVVPVGLTSHRAGLPPLRPVTRGEAGETIDLLRALGREFGKGEDGEPFAVAAD
                     EYYLKAGRDVPGRVSYGSFAQ"
     gene            complement(886..1488)
                     /locus_tag="VK429_00100"
     CDS             complement(886..1488)
                     /locus_tag="VK429_00100"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HLN90238.1"
                     /translation="MVSPLSRDRFDAARLINIANGLTAARVLLVPYFAYLLISGRGKA
                     ALLVFAVCGATDALDGLLARWLRQRTLVGALLDPIADKLLMATAFIVLSYVHIAPLRL
                     AIMVISRDIVILVGSFLYLLLFDASDIRATGLSKANTAVQILTVIYFLSVAAFPAESM
                     ALGAGMRSLPDRAVTLICAVTTVASGLQYLYIGIRKLSDA"
     gene            complement(1443..2567)
                     /gene="hflX"
                     /locus_tag="VK429_00105"
     CDS             complement(1443..2567)
                     /gene="hflX"
                     /locus_tag="VK429_00105"
                     /inference="COORDINATES: protein motif:HMM:TIGR03156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HLN90239.1"
                     /translation="MITETRDERALLVYAHRKRARGPAAVLHVAEVMDELKDLVLAAG
                     AKVMASRVQSVDSENPATVVGKGTIVRLKEEIEALGANLVVFQNLLKPKQQALLEEEL
                     DVKTLDRREVILDIFARRARTREGKLQVELAQLSFRLGRLAGGRKELSRLGGGIGTRG
                     PGEKKLEEDRRRIRTQIRQLERELTTVRRTRSLHYQRRREVGFPVVALVGYTNAGKST
                     LFNRLTGADVFVADQLFATLDPTARKFRLPGGREAILVDTVGFIHDLPDELRQAFLAT
                     LEGIGEADLLLHVVDGSSDTMESNVGSVNAILGELSFREKPGVLLMNKRDLCLPGAPP
                     QEGALRISAKSGEGIPELLTLIERELWFHRSQEIASTPPV"
     gene            complement(2564..>4212)
                     /gene="dnaE"
                     /locus_tag="VK429_00110"
     CDS             complement(2564..>4212)
                     /gene="dnaE"
                     /locus_tag="VK429_00110"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HLN90240.1"
                     /translation="DTVGVFQAESAGFTKLVKNLKPDQFNHLIDMVALYRPGPLQSGM
                     ADDFVERRHGRRKPEFLHPRLKEILGDTYGVMVYQEQVMEIAQALAGFTLGEADVLRK
                     AMGKKDDALMERQKSHFLEGAKGNGIPEARAVAIFDLMAQFGGYGFNKSHSAAYALLA
                     YQTAYLKTHYPVEYFSALMTSESGDTDKIIRYIAYCREKGIPILPPDVNESRFAFFPT
                     DRAIRFGLSAIKGLGASAIDAILEARGESLFRSVPDLLSRVDLRKVNKRAVESLIKSG
                     ALDSLDPDRGKVFADLPALLEEAQAEVRRLESGQFALFGEASGGKPGKRGRKGEAAAP
                     SWSRRERLTFEKETLGFYITGHPMDSFAAEIALYANATTGKLPALKPETEIRIGGLVT
                     GLKEKMTRRGEKMAIWTLEDLEGTVDVVVFPKSLPESRETLASPEPVFLVGRLKFEEQ
                     GMKIHAEEVFRMENVRERLAKSVHFHLLLDRMTPGDVAELRQTILRNSGEKKGFLHAI
                     RPGEFDAVIALPDGCGIAPSLELARDLRGRFGYDVLRLHG"
BASE COUNT          695 a         1433 c         1371 g          713 t
ORIGIN      
        1 atctgcgcga acgatccgta cgacacccgc ccaggaacgt cccgtcccgc cttcaggtaa
       61 tattcgtcgg cggcgacggc gaacggctcc ccgtcctccc ctttcccgaa ttccctgccc
      121 agtgcacgga gcagatcgat cgtctccccc gcctctcccc gcgtgaccgg gcgcagcggc
      181 ggcaatccgg cccggtggga agtgaggccc accgggacca ccgccactgt gcggaggccg
      241 ggacgcaggc cggagagttc ccggagggat cggacaagtt ccgacccgtc gttgaggcct
      301 gggcagacga cgatctgccc gtgaagggcg atcccgtggc ggatcaagcg ccgcatcacg
      361 gccatcacgt cgttcacccg cggattcccg agcatccgcc ggcgcagctc cgggtcggtc
      421 gtgtggatcg acacgtagag cggcgagaga cggtatcgga cgatcttcgc cgtctcctct
      481 tcggaaagat ccgagaaggt gacgtattgc ccgtgaagga aggagaggcg gacgtcctcg
      541 tccttcacgt acagggagcg tcgaagccct ttcggcagct ggtggacgaa gcagaagatg
      601 caccggtttc ggcagcggcg tacgcggatc ggctccggga aaattcctgg ggtctctccc
      661 cgcaggcgaa actccttctt ccggccggcc cccgatgcat cccgccaagc gagggtgaac
      721 cggttcctcg aagtgaggaa atggaggtcg aggaggtcct ccaccgggtg gtccgatacg
      781 gagaggatcc ggtccccggc gacgatcccg gcacgctccg ctggagatcc gggagtcacg
      841 gcctcgacgc ggacgccgtt ccgcgacgtc ctggtcgcgg cgccatcacg catcggagag
      901 tttccggatg ccgatgtaca ggtactggag cccggaggcg accgtcgtga ccgcgcagat
      961 cagcgtgacg gcccggtcgg ggaggctgcg catcccggct cccagcgcca tcgattccgc
     1021 aggaaacgcc gccaccgaga ggaaatagat gaccgtcagg atctggaccg ccgtgttcgc
     1081 cttgctgagt cccgtagccc ggatgtcgct cgcatcgaag agcaggaggt agaggaagct
     1141 ccccacgaga atgacgatgt ccctgctgat caccatgatc gcgagccgca ggggggcgat
     1201 gtggacgtag gagaggacga tgaaggcggt cgccatcagc agcttgtcgg cgatcgggtc
     1261 gaggagcgcc ccgaccagcg tccgctgccg cagccagcgg gccagcagcc cgtcgagcgc
     1321 gtccgtagcg ccgcagacgg cgaacaccag cagcgccgcc ttccccctgc cggagatcag
     1381 caggtaggcg aagtacggga ccaggaggac cctcgccgcc gtcagcccgt tggcgatatt
     1441 gatcagacgg gcggcgtcga agcgatctct tgagagcggt gaaaccatag ttccctctcg
     1501 atcagcgtca gcagctccgg gatcccctcc cccgacttcg cggaaatccg cagcgcccct
     1561 tcctgcgggg gcgccccggg gaggcacagg tcgcgcttgt tcatcaggag tacgcccggc
     1621 ttctcgcgaa acgacaattc cccgaggatc gcgttcaccg atccgacgtt gctctccatc
     1681 gtgtcggagc ttccgtcgac gacgtggaga agaaggtccg cctccccgat cccctcgagg
     1741 gtcgcgagga acgcctgccg cagttcgtcc ggaaggtcgt ggatgaaccc caccgtgtcg
     1801 acgaggatcg cctccctgcc gccgggaagc cggaacttcc gggcggtggg atcgagcgtg
     1861 gcgaagagct ggtccgcgac gaagacgtcg gcccctgtca gccggttgaa gagggtcgat
     1921 ttcccggcgt tggtgtaccc gacgagcgca acgacgggga accctacttc ccggcgccgc
     1981 tgataatgga gcgatcgcgt cctgcgcacc gtggtcagct cccgctcgag ctgccggatc
     2041 tgcgtgcgga tgcggcgacg atcctcctcg agcttcttct ctcccggtcc ccgggtgccg
     2101 attccaccgc cgagccgcga cagctccttc cgccccccgg cgaggcgccc gagccggaac
     2161 gagagctggg cgagctccac ctggagcttc ccctcccggg tgcgcgcgcg ccgggcgaag
     2221 atgtcaagaa tgacctcgcg gcggtcgagg gtcttcacgt cgagttcctc ttcgagaagc
     2281 gcctgctgct tcggcttgag caggttctgg aaaaccacca ggttcgcacc cagcgcttcg
     2341 atctcctcct tcaggcggac gatggtcccc ttccctacga ccgtggccgg attctcggag
     2401 tcgacgctct gcacgcggga ggccatcact ttcgcccccg ccgcgaggac gaggtccttc
     2461 agctcgtcca tcacctcggc gacatggagc accgccgccg gtccgcgggc ccgcttccga
     2521 tgggcgtaga cgaggagggc gcgttcgtcg cgcgtttccg tgatcatccg tggaggcgca
     2581 ggacgtcgta gccgaaccgg ccgcgaaggt cccgcgccag ctccagggac ggcgcaatgc
     2641 cgcagccgtc ggggagggcg atcaccgcgt cgaactctcc cgggcggatc gcgtggagga
     2701 accccttctt ctccccggag ttgcgaagga tcgtctgccg gagttcggcg acgtccccgg
     2761 gggtcatccg gtccagcaga agatggaagt ggacggattt cgcgagccgt tcccgtacgt
     2821 tctccatccg gaagacttcc tccgcgtgga tcttcatccc ctgctcctcg aatttgagcc
     2881 gcccgacgag gaaaaccggc tctgggctcg ccagggtttc ccggctctcc ggaagcgatt
     2941 tcggaaagac gacgacatcg accgtcccct caaggtcctc cagcgtccag atggccatct
     3001 tctccccacg ccgggtcatc ttctccttca gccccgtgac gagacccccg atccggatct
     3061 cggtctcggg cttcaacgcg gggagcttcc cggtggtcgc gttcgcgtac aatgcgatct
     3121 ccgcggcaaa cgagtccatc gggtgaccgg tgatgtagaa ccccagcgtc tccttctcga
     3181 aggtgagccg ctcccggcgg gaccacgaag gcgccgcggc ctcccctttc cgtccccgct
     3241 tcccgggctt ccccccggat gcttccccga agagcgcgaa ctggccggac tcgagcctac
     3301 ggacctctgc ctgcgcctcc tcgagaaggg cgggaaggtc ggcgaacacc ttgccgcgat
     3361 ccgggtcgag ggagtcgagg gccccggact tgatcaggct ctccacggcg cgcttgttca
     3421 ctttccgcag gtcgacccgg gagaggaggt cggggacgga acggaagagg ctctccccgc
     3481 gtgcctcgag gatggcgtca atcgcggacg ccccgagccc cttgatcgcg gaaaggccga
     3541 agcggatcgc ccggtcggta gggaagaagg cgaaccggga ttcgttcacg tccggcggga
     3601 ggatcgggat ccccttctcc cggcaatacg cgatgtagcg gatgatcttg tccgtgtccc
     3661 cggactccga ggtcatcagg gcgctgaaat attcgacggg gtaatgcgtc ttgaggtacg
     3721 cggtttggta cgccaacagc gcgtacgcgg cgctgtggga cttgttgaag ccgtacccgc
     3781 cgaactgcgc catcaggtcg aagatcgcga ccgccctcgc ctcggggatt ccgttcccct
     3841 tcgccccttc caggaagtgg gacttctgcc gctccatcag ggcgtcgtcc ttcttcccca
     3901 tcgccttccg gaggacgtcg gcctcgccca gggtgaaccc ggccagcgcc tgggcgatct
     3961 ccataacctg ctcctggtag accatgacgc cgtacgtgtc cccgaggatc tccttcaggc
     4021 ggggatggag gaactccggt ttccgcctcc cgtgccgccg ctccacgaaa tcatcggcca
     4081 ttccgctctg gaggggtccg ggccggtaca gggcgaccat gtcgatcagg tggttgaact
     4141 ggtcgggctt gaggttcttt acgagcttgg tgaaccccgc gctctcggcc tggaagaccc
     4201 ccaccgtgtc cc
//
LOCUS       DATGYW010000008         1874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_54366, whole genome shotgun sequence.
ACCESSION   DATGYW010000008 DATGYW010000000
VERSION     DATGYW010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54366"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            312..1253
                     /gene="mdh"
                     /locus_tag="VK429_00115"
     CDS             312..1253
                     /gene="mdh"
                     /locus_tag="VK429_00115"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007222520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HLN90241.1"
                     /translation="MSRKKITVIGAGNVGATTAQRLAERDFCDVVLVDIVEGMPQGKA
                     LDLMQSGPIYGYDSKVTGTNGYEETAGSDIVVITSGLARKPGMSRDDLLKVNAGIVKD
                     VTLKAIARSPGALLIVVSNPLDAMTYVAHKHSKLPANKVVGMAGILDSARFRAFIAME
                     LGVSVHDVTAFVLGGHGDTMVPSTKYTTVAGIPVEDLIPRDRLSQILERTAKGGAEIV
                     SLLKTGSAFYAPSAAAVQMCESILLDKKMILPCAVLSSGKYDGCDGLFVGLPAKLGAD
                     GVEEVVKFKLAANEAEALKRSAAAVKELCEAVDRLGF"
     gene            1318..>1874
                     /locus_tag="VK429_00120"
     CDS             1318..>1874
                     /locus_tag="VK429_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013859073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HLN90242.1"
                     /translation="MNIHEYQAKAVLSKYGVAVPKGKVADTPAEAEIIAEEFGTAVVV
                     KAQIHAGGRGKGGGVKFAKTPAEAREYAKQIIGMTLVTHQTGPQGKKVKRVLVEQAGR
                     IKRELYLGMVIDRGLSRVVMMASTEGGMEIETVAAKTPEKILKEWVDPAVGLMPFQAR
                     KLAFGLGIPGELTGKAVKFMTGLYKA"
BASE COUNT          358 a          558 c          658 g          300 t
ORIGIN      
        1 agccggaaaa gatccgccgg ggggtcgacc tggtgcgtgc gtccgtggac acggccgggt
       61 tgctgtcgct gtgtcggctt ccctcttgac atcccgcggc cctttgtata cggtatgcaa
      121 ggtttggggg gaccctctcc cattcttgcc cggaaaatcc catattatcc cgtggatgga
      181 ggaagaaatg accctcttca aaagcttgat tccgtccagg ggcagggaga aggcgccggc
      241 tctcccggag aaggatttga ggtgcggaga gttctccgat ttcgtcatcg cggacaagta
      301 ggggggacgc gatgagccgg aaaaagatca cggtaatcgg agcggggaac gtcggagcga
      361 cgaccgcgca gcggctcgcc gagagggact tctgcgacgt cgtgctcgtc gacatcgtcg
      421 aggggatgcc tcaggggaag gcgctcgacc tcatgcagtc cggcccgatc tacgggtacg
      481 acagcaaggt caccggtacc aacgggtacg aagagacggc cgggtccgac atcgtcgtca
      541 tcacgtcggg gctggcgcgc aagccgggga tgagccgcga cgacctcctc aaggtcaacg
      601 cggggatcgt gaaggacgtg accctcaagg cgatcgccag gtcccccggg gcgttgctca
      661 tcgtcgtttc gaatcccctc gacgccatga cctacgtggc gcacaagcac agcaagcttc
      721 cggcgaacaa ggtggtgggc atggccggga tcctcgactc cgcccgtttc cgggccttca
      781 tcgccatgga gctgggcgtc tccgttcacg acgtgacggc cttcgtcctg ggcggtcacg
      841 gcgacacgat ggtcccttcc accaagtaca cgaccgtggc cggcatcccg gtggaggacc
      901 tcatccccag ggaccgtctg tcgcagatcc tcgagcggac ggcgaagggc ggcgcggaga
      961 tcgtctccct gctgaagacg gggtcggcgt tctacgcccc ctcggccgcg gccgtccaga
     1021 tgtgcgaatc gatcctgctc gacaagaaga tgatccttcc ctgcgcggtc ctgtcgagcg
     1081 gaaagtacga cgggtgcgac gggctcttcg tcggcctgcc cgccaagctc ggcgccgacg
     1141 gcgtggagga ggtcgtcaag tttaagctgg ccgcgaacga ggccgaggcg ttgaagcggt
     1201 cggcggcggc ggtcaaggag ctttgcgaag cggtcgaccg gctcgggttc tagtgcacta
     1261 gcactcgccc gccgggaatc ggatcgatca caaaccaacc gggaggagcc ggaggatatg
     1321 aatattcacg agtaccaagc caaggccgtt ctgtccaagt acggcgtggc cgtcccgaag
     1381 gggaaggtcg cggatacccc ggcggaggcg gagatcatcg ccgaggagtt cggaaccgcc
     1441 gtcgtcgtga aagcccagat ccacgccggc gggcgtggca agggcggcgg agtgaagttc
     1501 gcgaaaaccc ccgcggaggc gcgggagtac gcgaagcaga tcatcgggat gaccctggtg
     1561 acccatcaga cgggacccca ggggaagaag gtgaagcggg tgctggtcga gcaggccggc
     1621 aggatcaagc gggaactcta cctcggcatg gtcatcgacc ggggactttc ccgggtcgtg
     1681 atgatggcct ccaccgaagg cgggatggag atcgaaaccg tcgcggcgaa aacgcccgag
     1741 aagatcctga aggagtgggt cgacccggcc gtgggcctca tgccgttcca ggcgcgcaag
     1801 ctcgcgttcg ggctcgggat ccccggggag ctgacgggga aggcggtcaa gttcatgacc
     1861 ggcctctaca aggc
//
LOCUS       DATGYW010000009         2532 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_54377, whole genome shotgun sequence.
ACCESSION   DATGYW010000009 DATGYW010000000
VERSION     DATGYW010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54377"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VK429_00125"
     CDS             <1..299
                     /locus_tag="VK429_00125"
                     /inference="COORDINATES: protein motif:HMM:NF014058.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="archease"
                     /protein_id="HLN90243.1"
                     /translation="APRERRVISVSADTLDLLLLELLQELVYHKDADRLLLRVRDLRI
                     EETGSGYRLHGDAVGETIDPGRHPLLADVKAVTLHRLSVEKTPSGWRAVVVLDV"
     gene            complement(388..642)
                     /locus_tag="VK429_00130"
     CDS             complement(388..642)
                     /locus_tag="VK429_00130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011939318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HLN90244.1"
                     /translation="MAIDNKTKELIAVGASITANCQPCLQYHKNKALEFGADAGEIAE
                     AIEMGKQVRKGAADKMDEFSAGSKDCGFPPMGWMKSACCG"
     gene            complement(703..1302)
                     /locus_tag="VK429_00135"
     CDS             complement(703..1302)
                     /locus_tag="VK429_00135"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLN90245.1"
                     /translation="MEGKRSFQEIYERFQPGVLRFLSRLVGQEEAEDVAQEVFLRVDR
                     GLEGFRGESSMGTWIYRIARNAALDRLRSQPAWLERARQLRAHGSDEDPVDIVSQLPD
                     ERASLERHLIGKEMSECIRGRVDTLPEPYRRVLVLRELVGMTNAEIASALGVSEGAVK
                     IRLHRARALLREDLGTHCTLYHDELAELSCEPKPAFGSI"
     gene            complement(1315..2166)
                     /gene="arsM"
                     /locus_tag="VK429_00140"
     CDS             complement(1315..2166)
                     /gene="arsM"
                     /locus_tag="VK429_00140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013720435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite methyltransferase"
                     /protein_id="HLN90246.1"
                     /translation="MTGEGGVEMKTEDVRKYVRDRYAGIAKQGGSCCGPSACCGAPEA
                     AEEASGRIGYTEEEMKSAPRGSNLGLGCGNPTALASLRAGETVLDLGSGAGFDCFLAA
                     EQVGNGGIVIGVDMTPEMIQKARENARKGNHENVEFRLGEIEHLPAANDSVDIVISNC
                     VINLSPAKDKVFAEAYRVLKPGGRAMISDIVLSGDLPEAVAGSLAAYAGCIAGAIREE
                     EYLRLMEAAGFRDVHVVQESRFAIAETEIDEYARSIAGNFNVPPEAVREAARSVLSVQ
                     VFGRKPA"
BASE COUNT          479 a          845 c          680 g          528 t
ORIGIN      
        1 ttgctccccg ggagcgccgc gttatctccg tttccgccga taccctggat ctcctcctgc
       61 tcgagctcct ccaggagctc gtctaccaca aggacgccga ccggctcctg ctgcgtgtgc
      121 gcgatctgcg gatcgaggag accggatcgg ggtatcgtct tcacggcgac gcagtcgggg
      181 agacgatcga ccccgggagg caccctctcc tcgcggacgt caaggcggtc accctgcacc
      241 gtctttccgt ggaaaagacc ccgtccgggt ggcgcgccgt cgtcgttcta gacgtctgag
      301 gatgcgggat ccggaggggg gggcagatca ccaccgcccc cccccggccg aatcacctct
      361 tcccgcggga agaccgatgc gccaggatca accgcagcat gctgatttca tccatcccat
      421 cgggggaaat ccgcagtctt tcgaaccagc ggagaattca tccatcttgt ccgccgctcc
      481 cttccggacc tgcttcccca tctcgatcgc ctcggcgatt tcccccgcat ccgccccgaa
      541 ttcgagagcc ttgttcttgt ggtactgcag acagggttgg cagttggcgg taatcgaagc
      601 ccccaccgca atgagttcct ttgtcttgtt gtcgattgcc atgagcaatc acctcctggt
      661 ttttggctct atagacgaag gcgtcctgaa aaaggataca ggtcagatcg aaccgaaggc
      721 gggcttcggc tcgcaggaaa gctcggcgag ttcgtcgtgg tacaaggtgc aatgggtgcc
      781 caggtcctcc cgcagcagcg ctctggcccg atggaggcgg atttttaccg ccccctcgct
      841 tacgccaagc gcggaagcta tctcggcgtt cgtcatcccg accaattccc ttaaaaccaa
      901 gactctccga tagggctccg gaagggtatc gacgcgtccc cggatgcatt cgctcatctc
      961 tttcccgatc aggtgccgct caagcgatgc ccgttcgtcc ggaagttggg acactatatc
     1021 caccgggtct tcgtccgaac catgcgctcg gagttggcgc gctctctcaa gccatgccgg
     1081 ttggctacgg aggcggtcga gcgcagcgtt cctggcgatc ctgtaaatcc aggtccccat
     1141 ggaggactct ccccggaagc cctcaagccc ccgatccacc cggaggaaga cctcttgagc
     1201 cacatcttcg gcctcctcct ggcccacaag gcgagagagg aatcgaagga cccccggctg
     1261 gaacctctcg tagatctcct ggaaagatct cttgccttcc atcaaggcat cctcctacgc
     1321 cggctttctc ccgaagacct gcacactcaa gaccgacctg gctgcctccc ggaccgcttc
     1381 cggggggacg ttgaaattcc cggcaatgct ccgggcatac tcgtcaatct ctgtttccgc
     1441 gattgcaaat cggctctcct ggacgacatg gacgtcccgg aaccccgctg cttccatgag
     1501 gcggaggtat tcctcctccc ggatcgcccc ggcgatgcat ccggcataag cggccaggga
     1561 accggcaacg gcttccggca gatccccgga aaggacgatg tccgagatca tcgccctgcc
     1621 tcccggcttg agaacccggt aggcctcggc gaaaaccttg tccttggccg gagaaaggtt
     1681 gatgacacag ttggagatga cgatgtccac ggagtcattg gccgccggca gatgctctat
     1741 ctcccccagc cggaattcga cgttttcatg gttgcccttt cgggcgttct cacgggcctt
     1801 ttgaatcatc tccggggtca tgtcgacgcc gatgactatc ccgccgttac cgacctgttc
     1861 tgccgccagg aagcagtcga agcccgcacc cgagcccagg tccagaacgg tctcccctgc
     1921 ccgcagggaa gcaagcgccg tcgggttacc gcagccgagt cccaagttgg acccccgggg
     1981 tgccgatttc atttcctctt ccgtataacc gatcctgccg ctcgcttctt ccgccgcctc
     2041 gggggcgccg cagcatgcgg atgggccgca gcaggaacct ccctgtttcg cgatgccagc
     2101 atagcgatcc ctaacgtatt tccggacatc ctcggttttc atctccaccc ctccttcacc
     2161 ggtcatccac cgaaaccagg gaatccacct tgcggctcct gaaaccggcc ggcgcgcagc
     2221 aaaacgcgcc ctttggctgt tttttcatcc tgccccccgt cctcatgtct gaaataaaaa
     2281 taatatctga tatttcagat caatctgaaa tatacctccg cgcagacata ttgtcaatac
     2341 ctgtcgggag agagccctta tgtcgaatgt caccgacggt cttccaagga gcagattgtg
     2401 cagagagtgg ccatgcgtcc gatgagcaga atccgcaatt atcccgacga tggaggatga
     2461 tcaccgttcc cgttgcatga aggacattcg atcgcatccc ctcgataata cgtattgcac
     2521 ttcaagcagc at
//
LOCUS       DATGYW010000010         1783 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_268085, whole genome shotgun sequence.
ACCESSION   DATGYW010000010 DATGYW010000000
VERSION     DATGYW010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_268085"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1284)
                     /locus_tag="VK429_00145"
     CDS             complement(<1..1284)
                     /locus_tag="VK429_00145"
                     /inference="COORDINATES: protein motif:HMM:NF013986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HLN90247.1"
                     /translation="MFLGIDVGSISMKFSLFLPEDSEDLSADLRRTFLDPEGVAFPGL
                     GKGYNLSYDRLLGDPVRKVPERLRRWLAVLGEGNVRAIAVTGRSGRQLAPLIGATYEN
                     DFRCLVKAITVTHPEVRTIFEMGGENAKVIRLEASGAAGLLTVKDYDTNGDCAAGTGS
                     FIDQQAHRMKLQVEQVGEMVAHAASAARIAGRCSVFAKSDMIHAQQKGYSPEEILKGL
                     CDAVARNFKSSINKGKDPVPKIALVGGLFENSGVVRAIRDAFGFSGEDAVVPRGFAHM
                     GALGAAAASSERAGAGASVTAGGPAVEEPEERVFPSWPPLTTENVVFLRDRVQSPPKP
                     EGRPEVFLGIDIGSVSTNFAVTDWDGNLLKEIYVGTQGRPVQVVTDGLQALRDEFGDT
                     ISIRGVGTTGSGRELIGELVGADTVQDEITAHKTGS"
     gene            1529..>1783
                     /locus_tag="VK429_00150"
     CDS             1529..>1783
                     /locus_tag="VK429_00150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015838793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HLN90248.1"
                     /translation="MFGIGFQEMLIILVVVLIFFGPKRLPDLAKSLGKGIAEFKKASE
                     EVRKGIEDAVKEESEGKAPEDLSASGKAPGSAPAAEKSAQP"
BASE COUNT          304 a          603 c          577 g          299 t
ORIGIN      
        1 cgagccggtc ttgtgggcgg tgatctcgtc ctggaccgtg tcggcgccga ccagttcgcc
       61 gatcagctcc ctgccggacc cggtggtccc aacgccgcgg atcgagatcg tgtccccgaa
      121 ctcgtcccgg agcgcctgca atccgtcggt caccacctgc accggacgtc cctgcgttcc
      181 gacgtagatc tccttgagga ggttcccgtc ccagtccgtc accgcgaagt tggtggagac
      241 cgaaccgatg tcgatgccga ggaagacctc gggtcggcct tcgggcttcg ggggggattg
      301 gacgcggtcc cgcaggaaga cgacgttctc cgtcgtgagg ggcggccacg aggggaagac
      361 gcgctcctcg ggttcctcta ccgccggccc tcccgcggtc accgatgcac ctgcccccgc
      421 gcgttccgat gaggccgccg ccgcgccgag cgcgcccatg tgagcgaatc cgcggggcac
      481 cacggcatcc tcccccgaaa aaccgaacgc gtcgcggatc gcgcggacga cacccgagtt
      541 ctcgaacaga ccgccgacaa gggcgatctt cggcacggga tccttcccct tgttgatgct
      601 gctcttgaag ttgcgcgcga cggcgtcgca cagtcccttg aggatctcct ccggggagta
      661 ccctttctgc tgggcgtgga tcatgtcgct cttggcgaac acggagcatc ggccggcgat
      721 cctcgccgcg ctcgcggcgt gcgccaccat ctcgccgacc tgctccacct gcagcttcat
      781 ccggtgggcc tgctggtcga tgaacgaccc cgtgcccgcc gcgcagtcgc cgttcgtgtc
      841 gtaatccttg acggtgagga ggcccgcggc gcctgacgcc tcgagccgga tcaccttggc
      901 gttctccccg cccatctcga agatcgtgcg gacctccggg tgcgtgaccg tgatggcctt
      961 gacgaggcag cggaagtcgt tctcgtacgt cgccccgatg agcggggcaa gctgccgacc
     1021 gctccgcccg gtgaccgcga tcgcccgcac gttcccctcg ccgaggaccg cgagccaccg
     1081 gcgcagccgc tccgggacct tccggaccgg atcgccgagg agacggtcgt acgaaaggtt
     1141 gtaccccttt cccaggccgg ggaatgccac gccttccgga tcgaggaacg ttcgacgcag
     1201 atccgcggag agatcctccg aatcctccgg cagaaacagg gaaaatttca tgctgatcga
     1261 accgacgtcg atgcccagga acaaatcgtc tctcctccct cggggaaaat gggggccaac
     1321 tttaacaatg tatacaatgg tcgtgccggg gcggtgatcg ctgataaatc ggccagttac
     1381 gagacccccg gcaacgcggc gctcccccgg ctccgcccga tcggataacc gcttgtccaa
     1441 tcggacaact cgcggccgtc cttggaaaac cggggcgagg cggggtatag taatatttcg
     1501 acgaatccga acgccgaaag gggtgcgcat gttcggtatc ggcttccagg agatgctcat
     1561 catcctggtc gtggtcctga tcttcttcgg cccgaagcgg ctcccggacc tggccaaaag
     1621 cctcggcaag gggatcgcgg agttcaagaa ggcgtccgag gaggtccgta aagggatcga
     1681 agacgcggtg aaggaagagt ccgaggggaa ggcgccggag gacctttccg cgtccgggaa
     1741 ggccccgggg agcgctcccg cggcggagaa atcggcgcag ccc
//
LOCUS       DATGYW010000011         1939 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_214680, whole genome shotgun sequence.
ACCESSION   DATGYW010000011 DATGYW010000000
VERSION     DATGYW010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1939
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214680"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1479)
                     /locus_tag="VK429_00155"
     CDS             complement(<1..1479)
                     /locus_tag="VK429_00155"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HLN90249.1"
                     /translation="MNRFPLRDHPLKKFEAPEIAGERNMKMRIRMHWLLGAALFAVIA
                     GGPTPSAGEEPLVEKYVLGNGLTVVIRPNPSSPVVAVQAWVKAGSTTETEARAGMSHI
                     LEHMAFKGTKRRGPGEIAREVEAVGGEVNAYTSFDQTVYHITLSGRFLENALDILADT
                     LANSVFDRAELSRELEVILEEVRMNEDNPGRVVDKALFREAYKVHPYGRPVIGFVDTI
                     RKTTREDLLAYFHANYVPGNMVLVIAGAVDPKTSRPLIEKTFGQLSPGSAPEVPRPVE
                     PPQGETRVVVKEKDARRAYIEMGFHGPSMRDPDVYAWDLLSMILGSGETSRLYRGVKD
                     GKGLVDSVNASSYTPRDAGLLSIGGTLSPEKAQAALKEILLETFRMTAAPPEGAELAR
                     AKTATETDFLYSLESQSAVARHVGFYETTLNDAAFEQTYLRKIRAVTADDIQAVAKKY
                     LAPGNLTVSAVVPAGQGGILPVEEVRTIVQEAYREATVPAAKA"
     gene            complement(1476..>1939)
                     /locus_tag="VK429_00160"
     CDS             complement(1476..>1939)
                     /locus_tag="VK429_00160"
                     /inference="COORDINATES: protein motif:HMM:NF019292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HLN90250.1"
                     /translation="LGDGAAGAFVMDALLPALLGALKLSAKLILIIVPLVTLFEVLRY
                     LPVFRRAGNVVEPMMRGVGLTRDAAIPLFIGIFLGIAYGAGIIIRVAQQKGLPARELF
                     LMGLFLATCHSVIEDILVFVVIGGNGLAILGVRLGLAVFLTGLMARVWKPA"
BASE COUNT          324 a          685 c          617 g          313 t
ORIGIN      
        1 ggccttcgcc gcaggcacgg tcgcctccct gtacgcctcc tgcacgattg tccggacctc
       61 ctccacggga agaatccccc cctgccccgc ggggacgacg gccgagacgg tcaggttccc
      121 gggggcgagg tacttcttcg cgaccgcctg gatgtcgtcg gcggtcaccg cgcggatctt
      181 gcgcaggtac gtctgctcga acgccgcgtc gttcagcgtc gtctcgtaga agccgacgtg
      241 gcgagccacc gccgactgcg actcgaggga gtacaggaaa tccgtctccg tggccgtctt
      301 ggcccgcgcc aactcggccc cctccggagg ggcggccgtc atccggaacg tctcgagaag
      361 gatctccttg agggccgcct gcgccttctc gggcgacaag gttccgccga tggacagcag
      421 acccgcgtcc ctcggggtgt acgaggaggc gttcaccgag tcgaccagcc ctttcccgtc
      481 cttgacgccg cggtagagcc gcgacgtctc cccgctgccg aggatcatcg acagcaggtc
      541 ccaggcgtag acgtccgggt ccctcatcga ggggccgtgg aaccccatct cgatgtaggc
      601 gcgccgagcg tccttctcct tgacgacgac ccgggtctcc ccctgcggtg gctcgaccgg
      661 cctcgggacc tccggcgcgg aaccggggga aagctgcccg aacgtcttct cgatcagcgg
      721 ccgggacgtt ttcgggtcca ccgcccccgc gatcaccagc accatgttcc cgggaacgta
      781 gttcgcgtgg aagtaggcga ggagatcctc acgcgtggtc ttccggatgg tgtcgacgaa
      841 cccgatgacg gggcgcccgt acgggtggac cttgtacgcc tcccggaaga gcgccttgtc
      901 gacgacccgc cccggattgt cctcgttcat ccgcacctcc tcgaggatca cctcgagttc
      961 gcgcgacagc tccgcgcggt cgaagaccga gttcgcgagc gtgtcggcga ggatgtcgag
     1021 cgcgttctcg aggaaccgcc ccgagagagt gatgtggtac accgtctggt cgaagctcgt
     1081 gtaggcgttg acctcgccgc ccaccgcctc gacctcccgg gcgatctccc cggggcccct
     1141 gcgcttcgtc cccttgaacg ccatgtgttc gaggatgtgg gacatccccg cgcgggcttc
     1201 ggtctccgtg gtactacccg ccttgaccca cgcctgcacc gccacgaccg gcgacgacgg
     1261 gttcggccgg atcacgacgg tcagcccgtt tccgagcacg tatttttcga ccaacggttc
     1321 ctccccggcg gagggagtcg gtccccccgc gatcacggcg aacagggccg cgcccagcag
     1381 ccagtgcatc cgaattcgca tcttcatatt ccgctccccc gcgatttccg gcgcttcgaa
     1441 cttcttcaat ggatgatccc gaaggggaaa gcggttcacg ccggcttcca gacccgcgcc
     1501 atcagtccgg tcaggaagac cgccagcccc agccgtacgc cgaggatcgc cagaccgttc
     1561 cccccgatga cgacgaagac gaggatgtcc tcgatcacgg agtggcaggt ggcgaggaag
     1621 agccccatga ggaaaagttc ccgggcgggg agccctttct gctgcgcaac ccggatgatg
     1681 atccccgccc cgtaggcgat gcccaggaaa atcccgatga acagggggat cgccgcgtcc
     1741 cgcgtgagac ccaccccccg catcatcggc tccacgacgt tccccgcccg gcggaagacg
     1801 gggaggtacc gaagcacttc gaagagggtc accagcggga cgatgatgag gatgagcttg
     1861 gcggaaagct tcagggcccc caggagggcg ggaagaagag catccatcac gaaagccccg
     1921 gcagcgccat cgcccagga
//
LOCUS       DATGYW010000012         1582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_214730, whole genome shotgun sequence.
ACCESSION   DATGYW010000012 DATGYW010000000
VERSION     DATGYW010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214730"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..>1582
                     /locus_tag="VK429_00165"
     CDS             146..>1582
                     /locus_tag="VK429_00165"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HLN90251.1"
                     /translation="MTASEVPTSLLLLAGGRSGVPSGGAWSAEAGGVIRLGDIAGDGP
                     LSPGVFPALHGSVWATDLSVGEMRFGECRASGSKRGDAIEGEILTRAPDSRLAWSVSL
                     REPFGFRLDGTFSLGDPGNGTAKNGNRRFSLRGRAQIEGALRAVEKTSGTVLVESLTY
                     REGGFELSGKDLSARMDPTGVRWTGGTILAAGNPLRISGRVSWGRELDIRVDGKLPAS
                     AVRLAVPSVFDRLDGTMTLEARVTGSLDAASIVGTGHLEGGTLSFIGYNQLFEGIRAD
                     AVISREKIVIEHFEGRSGGGYIDGWGEVPLKMDAGQRLYFSVDFLDMRYPYPEDFHPV
                     VQGHVELIGPVEDLLVAGDVEVQSARYTRVLYPEKALVDFSRKLSDVVARREKSEFRV
                     RLDINVVADRTIRIKNNLADIKAGGEFKVEGDTRKVIVLGTFDVYEGYVELYGSRYDL
                     KRVTVDFQDPRRINPRLDARGETKKGGYN"
BASE COUNT          255 a          497 c          566 g          264 t
ORIGIN      
        1 ggtgggtccg gcacggctgt cgggtgtgcg cgtggaaggc cgcctcgggg ccgccgacgg
       61 gacgttctcc ctccgctccg cctcgccccc ggtgcggatc gacggagagg tgaatcgctc
      121 cgacgggtgg ccgacgaagg tgtcgttgac cgcctcggag gtccccacgt cgctactcct
      181 cctcgccggg gggcgttccg gggtcccttc cggcggcgcg tggagcgccg aggccggggg
      241 ggtgatccgc ctgggggaca tcgcggggga cggccccctt tctccggggg tctttcccgc
      301 cctgcacggc tcggtctggg cgacggatct ttccgtcggc gagatgcgct tcggggagtg
      361 ccgtgcctcc ggaagcaagc gcggggatgc gatcgagggg gagatcctga cacgcgctcc
      421 cgactcccgg ctcgcatggt cggtctccct gcgggagccg ttcggcttcc gcctcgatgg
      481 gacgttcagt ctgggtgacc ccgggaacgg aacggcgaaa aacggaaacc ggcgcttctc
      541 cctccgcggg cgcgcgcaga tcgagggagc cctccgcgcg gtggagaaga cctcggggac
      601 cgttctcgtc gaatcgctca cttatcggga ggggggcttc gaactctcgg ggaaggacct
      661 ttccgcccgg atggatccga cgggggtccg ttggaccggc gggacgatcc tcgccgctgg
      721 gaaccccctc cggatctccg ggagggtctc ctggggtcgc gaactggaca tccgcgtgga
      781 tgggaaactg ccggcgtcgg cggtccggct tgccgttccc tccgtcttcg accgcctcga
      841 cgggacgatg acccttgaag cccgggtcac agggagcctg gacgccgcct cgatcgtggg
      901 gaccgggcac ctggaaggcg gcaccctctc gttcatcgga tacaaccagc ttttcgaggg
      961 gatccgcgcg gacgcggtca tcagccgcga aaagatcgtt atcgaacatt tcgaggggag
     1021 aagcggaggc ggctacatcg acggatgggg agaggttccg ctcaagatgg acgcggggca
     1081 gcgcctttac ttctccgtgg acttcctcga catgcgatat ccttacccgg aggattttca
     1141 tcccgtcgtc caggggcacg tggagttgat cggacccgtg gaagacctcc tggtggcggg
     1201 ggatgtcgag gtacagtccg cgcgctacac ccgggtcctg tatcccgaga aagcgctcgt
     1261 agacttcagc cggaaactct cggacgtcgt ggcgcggcgg gaaaaatccg aattccgcgt
     1321 ccggctggac atcaacgtcg tcgcggaccg caccatccgg atcaagaaca acctggcgga
     1381 catcaaagcc ggcggcgagt tcaaggtcga gggggacacc cgcaaagtga tcgtcctcgg
     1441 gaccttcgat gtctacgaag ggtacgtcga gttatacggc agccggtacg acctgaagcg
     1501 ggtcaccgtg gacttccagg acccgcggag gatcaacccc cgtctggacg cgcggggcga
     1561 gacgaagaag gggggctaca ac
//
LOCUS       DATGYW010000013         3166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_375776, whole genome shotgun sequence.
ACCESSION   DATGYW010000013 DATGYW010000000
VERSION     DATGYW010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3166
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375776"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VK429_00170"
     CDS             complement(<1..222)
                     /locus_tag="VK429_00170"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HLN90252.1"
                     /translation="MMRILVAGGAGFIGSNFIRYILGAHDDWSVVNVDKLTYAGNLAN
                     LTDLAGDPRYGFHRADICDAAEMSRIFAGE"
     gene            complement(219..1079)
                     /gene="rfbD"
                     /locus_tag="VK429_00175"
     CDS             complement(219..1079)
                     /gene="rfbD"
                     /locus_tag="VK429_00175"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: protein motif:HMM:TIGR01214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HLN90253.1"
                     /translation="MRLLITGGLGLLGKEIARVFDGSAGIRTTDREEWDVTDPAACRR
                     EVDGFRPDVVIHCAAYTAVDRAESEAVFANLLNVEGTRNVARACRERGALMVTFGTDY
                     IFDGSSSRPYREEDPANPLSVYGKTKWAAEQALREEGGDHLLVRTQWLFGPAGKNFIR
                     TILEKARRGDTLRVASDQVGCPTYSRDLAGAVRNLLKAGARGTVHFSGEGETSWFGLA
                     RYVLQRCGLPTGELFAAKTRDLPYPAPRPAYGVLSKEKYRAITGTSPRPWEESVGEYL
                     ETIAPEGGAH"
     gene            complement(1111..1566)
                     /locus_tag="VK429_00180"
     CDS             complement(1111..1566)
                     /locus_tag="VK429_00180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020258353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HLN90254.1"
                     /translation="MIDGVMVKQLRVLPDERGRLMEILREDDDIYMRFGQVYLTTGYP
                     GVVKAWHYHKIQFDHFCVVKGMMKVVLYDSRDGSPTKGEVNEFFLGEHRPIVLRIPPL
                     VYHGFKTISGEEAFLINVSTQTYKYDAPDEFRVPPHDNDIPYKWERKDG"
     gene            complement(1576..2925)
                     /locus_tag="VK429_00185"
     CDS             complement(1576..2925)
                     /locus_tag="VK429_00185"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014855047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HLN90255.1"
                     /translation="MNVAIIGTGYVGLVTGVCLAERGNTVHCVDTNPSVVEKLNAGQV
                     TIYEPGLDDIYLRNLKKGRISFSGDLEKAVVPAEIIFLCLPTPPGEDGSADLQYILQV
                     ANDIGKIFASRPEAGYKVVVDKSTVPVGTSEKVRAAIRKNVGPSFAFSVVSNPEFLRE
                     GFAVEDFLRPERVVIGSSEERAIVALKDLYEPFLQTGSKVIVMDEKSAEVTKYAANAF
                     LALKISYMNDLANFCDAVGADIDRIRDGIGSDSRIGPKFLYPGLGYGGSCLPKDVKAL
                     LKSASDAGSTLSVLQAVEDINQEQRKRFFRKMERHFAGKLEGLKFAVWGIAFKPNTDD
                     TREAPVFHIIDELLKGKATVAVYDPEAMEGARARYGDRIGYAESSYGALQGADALVIA
                     TEWFEFRKPDFGLMKTLMRQPVLFDGRNIFDPRKMRERGFLYHSIGRKAHEDHGTGS"
BASE COUNT          516 a         1156 c          918 g          576 t
ORIGIN      
        1 ctctcccgcg aagatccgcg acatttccgc cgcgtcgcag atgtccgccc gatggaatcc
       61 gtaccggggg tcacccgcca ggtccgtcag attcgcaagg ttccccgcgt aggtcagctt
      121 gtccacgttc acgacggacc agtcgtcgtg ggcccccagg atgtaccgga tgaagttcga
      181 gccgatgaag ccggcccccc cggcgacgag aatccgcatc agtgcgcccc cccttccgga
      241 gcgatcgttt caaggtactc ccccaccgat tcctcccacg gcctcgggga ggtcccggtg
      301 atcgcgcgat acttctcctt gctcaaaacg ccgtacgccg gccttggcgc cgggtacggc
      361 aagtcccgtg ttttcgccgc gaacagctcc cccgtcggca gaccgcaccg ctgcagcacg
      421 taccgggcga gaccgaacca gctcgtctcc ccttcgccgg agaagtggac cgtcccccgc
      481 gcgcccgcct tcagtagatt ccgtacggcg ccggccaggt ccctcgaata cgtcgggcac
      541 ccgacctggt ccgacgcgac gcgaagcgta tccccccgcc gcgccttctc gaggatcgtg
      601 cggatgaaat tcttccccgc gggaccgaac agccactggg tgcgcaccag caggtggtcg
      661 cccccctcct cccgaagcgc ctgctcggcc gcccacttcg tcttcccgta cacggagagc
      721 gggttcgccg gatcctcttc ccgatacggg cgggaggagg atccgtcaaa gatatagtcg
      781 gtgccgaacg tgaccatcaa ggccccgcgc tccctgcagg cgcgcgcgac gttgcgcgtc
      841 ccctccacgt tcaggaggtt cgcaaacacc gcttcgctct ccgcccggtc cacggccgtg
      901 taagccgcgc aatggatcac cacgtccggg cggaacccgt cgacctcccg ccggcacgcc
      961 gcggggtccg tcacgtccca ctcttcccgg tcggtcgtgc ggatccccgc ggaaccgtcg
     1021 aagacccgcg cgatctcttt cccgagcagg ccaagaccgc cggtgatcag cagcctcacg
     1081 tccttcgccc ggtcttgccg cgcgcgacgg tcacccgtcc ttcctctccc acttgtaagg
     1141 gatgtcgttg tcgtgcgggg ggacgcggaa ctcgtccggc gcgtcgtatt tgtacgtctg
     1201 cgtggagacg ttgatcagga acgcctcttc cccgctgatc gtcttgaacc cgtggtagac
     1261 gagcggcggg attctcagaa caatcggccg gtgttcgccg aggaagaatt cgttcacctc
     1321 ccccttcgtc ggggagccgt cccgggagtc gtagagcacc accttcatca tccccttgac
     1381 cacgcagaag tggtcgaact ggatcttgtg gtagtgccac gccttgacga cgcccgggta
     1441 cccggtggtc aggtacacct ggccgaaccg catgtagatg tcgtcgtcct cgcgcagaat
     1501 ctccatcagt cgcccgcgct cgtccgggag caccctcagc tgcttcacca tcacgccgtc
     1561 gatcatctca ccctcctaag aacccgttcc gtggtcctcg tgggccttgc ggccgatcga
     1621 gtggtagagg aagccgcgct cccgcatctt ccgcgggtcg aagatgttgc gcccgtcgaa
     1681 gaggaccggc tgacgcatga gggtcttcat cagcccgaaa tcgggcttgc ggaactcgaa
     1741 ccactccgtg gcgatcacca gggcatccgc cccctgcagc gcgccgtacg acgactcggc
     1801 gtacccgatc cggtccccgt accgcgcccg cgccccctcc atcgcctcgg gatcgtacac
     1861 ggccaccgtc gccttccctt tcagcagctc gtcgatgatg tggaagaccg gcgcttcccg
     1921 cgtgtcgtcc gtgttcggct tgaacgcgat cccccagacg gcgaacttca gcccctcgag
     1981 cttgccggcg aagtgccgct ccatcttccg gaagaagcgc ttccgctgct cctggttgat
     2041 atcctccacc gcctgcagga cggagagcgt cgaccccgcg tccgacgcgc ttttcagcag
     2101 cgccttcacg tctttcggca ggcacgaacc gccgtacccc agccccgggt agaggaactt
     2161 gggcccgatg cgcgagtcgg acccgatccc gtcgcggatc cggtcgatgt cggcccccac
     2221 cgcgtcgcag aagttcgcca ggtcgttcat gtaggagatc ttcagggcga ggaaggcgtt
     2281 cgccgcgtac ttggtcacct cggcgctttt ctcgtccatc acgatgacct tgctgccggt
     2341 ctgcaggaac ggctcgtaga ggtccttgag ggccacgatc gcccgctcct cgctcgaccc
     2401 gatcaccacg cgctccggcc gaaggaaatc ctcgaccgcg aacccctcgc gcaggaactc
     2461 cggattcgac acgacgctga aggcgaagga cggccccacg ttcttccgga tcgccgcccg
     2521 caccttttcg ctcgtcccca ccggcacggt ggatttgtcg accaccacct tgtaccccgc
     2581 ctccggccgg gaagcgaaga tcttcccgat gtcgttcgcc acctgcagga tgtactggag
     2641 gtccgcggag ccgtcctccc ccgggggcgt gggcaggcac aggaagatga tctccgccgg
     2701 cacgaccgcc ttctcgagat cccccgaaaa ggagatcctc ccctttttga gattgcgcag
     2761 gtagatgtcg tcgagcccgg gctcgtagat cgtcacctgc ccggcgttca gcttctccac
     2821 caccgaagga ttcgtgtcga cgcagtgcac ggtgttgccc cgctcggcga ggcacacccc
     2881 ggtgaccagc cccacgtacc ccgttccgat gatcgccaca ttcatccgcc aacccccgtc
     2941 atttcaagtg atcgatggtt ccaagtatcc taatcggctg agaatacctt aatcttcagt
     3001 gcgcgggaag tccggaaacg aaaccggcgg gcaccggggt atacttcgat gatgccctgc
     3061 attccccgaa gcatccacgg ccgcaggggg gcgtggatca ccacctgtct ccttctggga
     3121 gccgcatgga cagcgattct tccggggacc gtccgcgcca tcggga
//
LOCUS       DATGYW010000014         4300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_429275, whole genome shotgun sequence.
ACCESSION   DATGYW010000014 DATGYW010000000
VERSION     DATGYW010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4300
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429275"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..696)
                     /locus_tag="VK429_00190"
     CDS             complement(<1..696)
                     /locus_tag="VK429_00190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002639613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLN90256.1"
                     /translation="MVFDLTEEQRMIQETAREFARKEVLPKAAELDENSRFPEELIRQ
                     MAELGFMGIAVPEEYGGAGMDNVCYAIAMEEISRACASTGVIMSVNNSLACDPILKFG
                     SEEIKREYLVPMASGKKLGCFGLTEPGAGSDAGSQKTTAVRDGDFYVVNGTKNFITNA
                     PQADTCVLFTMTDKAKSHKGITAFVVDMKWKGVSLGKHEKKMGIKASATSSIVFEDVR
                     VPAKNRLGNEGDGF"
     gene            complement(743..1525)
                     /locus_tag="VK429_00195"
     CDS             complement(743..1525)
                     /locus_tag="VK429_00195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014903822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HLN90257.1"
                     /translation="MAYENLLVDVTDRIATVTFNRPKSLNALNPATVRELGAAMEELS
                     ARPDVGAVLLTGAGEKAFIAGADISAMKGFSTLEALDFSFLGQRVLAFIESMPQPVIG
                     VINGFALGGGCEVAMACDLLIAADTARFGQPEVNLGIIPGYGGTQRLPRLVGRNVAKE
                     LVLTGEMISAQRAYEIGLVNKVVPAAGLMDAAREIAKKILSRGPVAVRTAKMAMNRGL
                     DLDLNNACALEASLFAAGFSTADREEGIAAFLEKRKANFTGK"
     gene            complement(1536..2393)
                     /locus_tag="VK429_00200"
     CDS             complement(1536..2393)
                     /locus_tag="VK429_00200"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004075477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HLN90258.1"
                     /translation="MSVSKIGVLGAGQMGSGIAQVSLLSGLQVVLNDVSDAVLDRSRA
                     GIARGLDILVRKEKITAQDKEKALSGLLATTDFAAFASCDLVVEAATEREELKLSLFR
                     KLDGAVPAGRILATNTSSISITKIAAATTRPTQVIGMHFMNPVPLMKLVEVIRGLQTS
                     QETFNATMSLARSLGKEPVPANDFPGFIANRILMPMINEAVYALMEGVGEAADIDAIM
                     KMGANHPMGPLALADLIGLDTCLEVMNVLQQGLGDSKYRPCPLLRKHVEAGYLGKKTG
                     RGFYTYEKA"
     gene            complement(2455..3633)
                     /locus_tag="VK429_00205"
     CDS             complement(2455..3633)
                     /locus_tag="VK429_00205"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011344263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HLN90259.1"
                     /translation="MKEVVITGAARTAIGSLMGGLSDVSAPRLGAVAIAEAVSRSGIR
                     KEDVEQVIMGNVLSAGIGQAPARQAGIYAGIPVSAGALTINKMCGSGLKAVMLAAQSV
                     ATEEFDVQVAGGMESMSQAPYLLKKARSGYRLGNDAIYDHMIIDGLWDVYNDLHMGNC
                     AETLAKEYKITREDQDAFAASSYTRALSAIKNGKFSKEIVPVPVPARKGDPVPFLVDE
                     EPGRGNVAKLPTLRTVFEKNGTVTAGNASTINDGAAALVVMSSDAAKRLGAKPLARIV
                     GYATASLEPVWFTIAPVDAIRKLLQKTGIAKEKVGLFEINEAFAGVAIAAIRGLSLDP
                     ERVNVNGGAVALGHPVGCSGARILTTLLYAMADRGERYGVASLCIGGGEAVAVMVEKL
                     "
     gene            complement(3630..4067)
                     /locus_tag="VK429_00210"
     CDS             complement(3630..4067)
                     /locus_tag="VK429_00210"
                     /inference="COORDINATES: protein motif:HMM:NF020839.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HLN90260.1"
                     /translation="MANATEETYAIGEISRLVDLSQRTIRYYEEIGLLHSVRRIENGK
                     RVYTDHDVRRLKFINRLKVLGLSLAEMVELEKIYRKQRNNREILPKLLDILDERAAQI
                     DERVAQLVALKNEIREYQQRLRNKVLQDPTREDPGTTGKEMRS"
BASE COUNT          693 a         1452 c         1278 g          877 t
ORIGIN      
        1 gaacccgtcc ccttcattcc ccagccggtt cttcgccggg acgcggacgt cctcgaagac
       61 gatcgaagac gtggccgacg cctttatccc catcttcttc tcgtgcttcc cgagcgagac
      121 tcccttccac ttcatgtcga ctacgaacgc ggtgatcccc ttgtgcgatt tcgccttgtc
      181 ggtcattgtg aagaggacgc aggtgtccgc ctgcggggcg ttcgtgatga agttcttcgt
      241 cccgttgacg acgtagaaat caccgtcccg gacagcggtc gtcttctggg aaccggcgtc
      301 ggaaccggcg ccgggctccg tgagcccgaa gcagccgagc ttcttcccgg aggccatcgg
      361 cacgagatat tcccgcttga tctcctcgga gccgaacttg aggatcgggt cgcacgcgag
      421 cgaattgttg accgacatga tgacgccggt ggaggcgcac gcgcgcgaga tctcctccat
      481 cgcgatcgcg tagcagacgt tgtccatccc cgcgccgccg tactcctcgg ggacggcgat
      541 ccccatgaag ccgagctcgg ccatctggcg gatcagttcc tcggggaacc ggctgttttc
      601 gtccagctcg gccgccttcg gcaggacctc cttccgggcg aactccctcg ccgtttcctg
      661 gatcatccgc tgctcttcgg tcagatcgaa caccatcgtt tcgtctcccc tgtcgttgaa
      721 tgtggggcgt cgttccccgg aatcattttc cggtaaagtt cgccttccgc ttctcgagga
      781 acgcggcgat cccttcctcc ctgtcggcgg tggagaatcc cgcggcgaac agggacgcct
      841 cgagcgcgca ggcgttgttc aggtccaggt cgagcccccg gttcatcgcc atcttcgcgg
      901 tgcggacggc gaccggcccc cgggagagga tcttcttcgc gatctccctc gccgcgtcca
      961 tcaagcccgc cgccgggacg accttgttca ccagtccgat ctcgtacgcc cgctgcgcgg
     1021 agatcatctc cccggtgaga accagttcct tcgcgacgtt ccgaccgacc agccgcggca
     1081 ggcgctgcgt tccgccgtat cccgggatga ttccgaggtt cacctcgggc tggccgaacc
     1141 gggccgtatc cgcggcgatc agcaggtcgc acgccatcgc gacctcgcac cccccgccca
     1201 acgcgaatcc gttgatcacg ccgatgaccg gctgcggcat cgactcgatg aaggcgagga
     1261 cccgttggcc gaggaaggag aaatcgagcg cctccagcgt cgagaaccct ttcatcgcgg
     1321 agatgtcggc cccggcgatg aacgccttct ccccggcgcc ggtcaggagg accgctccca
     1381 cgtccggccg cgccgagagc tcttccattg cggcgccgag ctcccgcacc gtcgcgggat
     1441 tcagggcgtt cagggatttc gggcggttga aggtgacggt cgcgatccga tccgttacat
     1501 cgaccagcag gttctcgtag gccatcggcc cctccttatg ccttctcgta cgtgtagaag
     1561 ccgcgtcccg tcttcttccc gaggtagccg gcctcgacgt gcttgcgcag gagggggcac
     1621 gggcgatact tcgaatcccc caatccctgc tgcaggacgt tcatcacctc gaggcaggtg
     1681 tcgagtccga tgaggtccgc cagcgccagt ggccccatcg gatggttcgc ccccatcttc
     1741 atgatcgcgt cgatatcagc ggcctccccg accccttcca ttaaggcgta gaccgcctcg
     1801 ttgatcatcg gcatgaggat ccggttcgcg atgaatcccg ggaagtcgtt tgcgggaacc
     1861 ggctccttcc cgagcgaacg tgcgagcgac atcgttgcgt tgaacgtctc ctgggacgtc
     1921 tgcagccccc ggatcacctc gacgagtttc atgaggggga ccggattcat gaagtgcatc
     1981 cctatcacct gcgtcggacg cgtcgtcgcg gcggcgattt tcgtgatcga gatggaggag
     2041 gtgttcgtcg cgaggatccg tcccgcggga accgccccgt cgagcttccg gaagagggag
     2101 agcttcagct cctcccgttc cgtggccgct tccacgacga ggtcgcagga agcgaaggcc
     2161 gcgaaatcgg tcgtggccag aaggccggag agcgcctttt ccttatcctg cgctgtgatc
     2221 ttctccttgc ggacgaggat gtcgagcccc ctcgcgattc ccgcacgtga ccggtcgagg
     2281 accgcgtcgg acacgtcgtt caggacgacc tgcaggccgc tcagcagcga gacttgcgcg
     2341 atcccgcttc ccatctggcc ggcaccgagg acgccgatct tcgaaacgct catttgttcc
     2401 ccctgacata tcgcatcatt aacggtatgt tatttcattt aaagtaaagt tatactataa
     2461 cttctctacc atcacggcga cggcctctcc cccgccgatg caaagcgaag cgactccgta
     2521 ccgctcaccg cggtcggcca ttgcatacag cagcgtggtg agaatccgcg cccccgagca
     2581 gccgacgggg tgccccagcg ccaccgcacc gccattcacg ttcacgcgct ccggatccag
     2641 cgacagcccc cggatggcgg cgatcgccac ccccgcgaac gcctcgttga tctcgaagag
     2701 ccccaccttc tccttcgcga tgccggtttt ctgaagaagc ttccggatcg cgtccaccgg
     2761 tgcgatcgtg aaccagaccg gttcgaggga ggccgtcgcg tagccgacga tgcgtgccag
     2821 cggcttcgcc ccgagacgct tcgccgcgtc cgaagacatc accaccaggg ccgccgcccc
     2881 gtcgttgatc gtcgaggcgt tcccggcggt gacggtgccg tttttctcga aaaccgtccg
     2941 gagggtgggc agcttcgcca cgttcccgcg tccgggctcc tcgtccacaa ggaacggcac
     3001 cgggtctccc ttgcgcgccg ggaccgggac agggacgatc tccttagaga atttcccgtt
     3061 cttgatggcg gaaagggcgc gcgtgtacga ggaggccgcg aacgcgtcct ggtcctcgcg
     3121 cgtgatcttg tattccttcg caagggtctc cgcgcaattt cccatgtgga ggtcgttgta
     3181 gacgtcccac aggccgtcga tgatcatgtg atcatagatg gcgtcgttcc ccaaccggta
     3241 gccggaacgg gcctttttca acaggtacgg cgcctggctc atcgactcca tcccgcctgc
     3301 gacctgcaca tcgaactcct ccgtggccac ggactgggca gcgagcatga cggcctttag
     3361 gccggatccg cacatcttgt tgatggtgag cgccccggcc gagaccggga taccggcgta
     3421 gatgccggcc tggcgggcgg gcgcctggcc gatccccgcg gagaggacgt ttcccatgat
     3481 cacctgttcc acgtcctcct tgcggatccc gcttcgggaa accgcctccg cgatcgcgac
     3541 cgcgccgagc cgtggggccg atacatccga cagtcccccc atcagcgacc cgatggcggt
     3601 tcttgccgct ccggtgatga cgacttcctt catgagcgca tctcctttcc ggtcgttccc
     3661 ggatcttccc gggttgggtc ctgaagtacc ttgttcctca ggcgctgctg gtattcccgg
     3721 atctcattct tcaacgccac gagttgcgct acgcgctcgt cgatctgggc ggcacgctcg
     3781 tcgaggatgt cgagcagctt cggaaggatc tcccggttgt tgcgctgctt ccggtagatt
     3841 ttttcgagct cgaccatctc tgcgagggaa aggccgagga ccttaaggcg gttgatgaat
     3901 ttcaggcggc ggacgtcgtg gtcggtgtag acgcgtttcc cgttctcgat ccggcggaca
     3961 ctgtgcagca ggccgatctc ctcgtagtag cggatcgttc gctgcgacag gtcgaccagg
     4021 cggctgatct ccccgatcgc gtaggtttcc tctgttgcat tcgccatatc tcaccacctt
     4081 acgttaactg gcaagatgat atgcgtcgcc accacattgt gtcaactgca attttccggt
     4141 tagtcttcat tttgtgcttc cgggctcgtg ccccccgttg ttcctacagc ggggtaccct
     4201 agcaatgcga agcccatatt ggggctgggg gtcctccaca ccgctacgcc ctccgcaccg
     4261 cggaagacta tccggcgatg agccgtctgg caagcaggat
//
LOCUS       DATGYW010000015         2204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_108213, whole genome shotgun sequence.
ACCESSION   DATGYW010000015 DATGYW010000000
VERSION     DATGYW010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2204
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108213"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1538)
                     /locus_tag="VK429_00215"
     CDS             complement(<1..1538)
                     /locus_tag="VK429_00215"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLN90261.1"
                     /translation="MEWGGKGICMFDGRDTGAGAGREQDRPVILEDATSASDTSGEDP
                     RGKSRCSEREQYRIIFQRSPVGIFRYDRDLRITDVNDCFVRILRSGRDLLVGIDMETL
                     KDRRIHQALKAPLEGRDGYYEGRYRATYSTAEPTISMRTTPFFSEDGNLEGGLGIVED
                     ISGRVKAEEEQSRFAALVEHSNDFIGIASLDGKMLFLNGAGRKLAGLEDVKDIREIDA
                     RDLAFPKHRSTLDGIFSGLRETGRWKGEAKIRHFKTGASLPVEMHAFAIRNPETNEIV
                     AFANISRDISERKAMEREMIKGQKLESIGILAGGIAHDFNNLLSAIAGYISLIGVQVS
                     PGTEIGALLSKAGKAISRAKDLTQQLLTFSKGGNPVKKPIAIGELIRDSCDLALRGSK
                     VRCDVVLSPDLRLVDVDDGQILQVLNNLLINAWQAMPTGGEIHVAARNVRVALGEIPS
                     LAGGEYVEVSVADTGIGIAGEHLQKVFDPYFSTKQEGSGLGLATSYAILRKHDGIITV
                     RSKLG"
     gene            1683..1883
                     /locus_tag="VK429_00220"
     CDS             1683..1883
                     /locus_tag="VK429_00220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90262.1"
                     /translation="MEGTVLITVSERDRAGALEAARRFAALGFSIVATAAAIATAKGI
                     SAHRLGHADVRSLQQYHAGIGG"
     gene            2003..>2204
                     /locus_tag="VK429_00225"
     CDS             2003..>2204
                     /locus_tag="VK429_00225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90263.1"
                     /translation="MKKVMLVLTSIAVLFASGCATKNYVKTQVDPLSDRIGRIEARLN
                     AMDGKLDQAVKTGQLSTADIKAA"
BASE COUNT          370 a          748 c          651 g          435 t
ORIGIN      
        1 ccgagtttcg accggacggt gatgatcccg tcgtgcttcc tgaggatcgc gtaggaggtg
       61 gcgagcccga ggccgcttcc ttcctgcttg gtcgagaagt acgggtcgaa gaccttctgc
      121 agatgttccc ccgcgatgcc gatcccggta tccgcgaccg acacttcgac gtactccccc
      181 cccgccaggg aggggatctc gccgagcgcc acgcgtacgt tccgcgccgc cacatggatc
      241 tctccacccg tcggcatggc ctgccaggcg ttgatcagca ggttgttcag gacctggagg
      301 atctgcccat cgtccacgtc cacgagccgg agatccggcg agagaacgac atcgcaccgc
      361 accttcgacc ccctcagcgc caggtcgcag gaatcacgga tcagttcacc gatggcgatc
      421 ggcttcttca ccgggttccc ccccttggag aaggtaagga gctgctgggt cagatccttc
      481 gcgcgggaga tcgctttccc ggccttcgac aggagcgcgc cgatttccgt cccgggagag
      541 acctgcaccc cgatcaggga gatatacccc gcgatcgccg aaagcaggtt gttgaaatcg
      601 tgcgcgatgc ccccggcgag aatgccgatg gactcgagtt tctggccctt gatcatctcc
      661 cgctccatgg ccttccgctc gctgatgtcc cggctgatgt tcgcgaacgc gacgatctcg
      721 ttcgtctccg gattcctgat cgcgaacgcg tgcatctcga ccgggagcga cgcgccggtc
      781 ttgaaatggc ggatcttggc ctcccctttc catctgccgg tttcacgcag gcccgagaag
      841 attccatcca gggtggaccg atgcttgggg aaagcgaggt cgcgcgcgtc gatctcccgg
      901 atgtccttca cgtcttccag cccggcgagt ttcctgccgg caccgttcag gaacagcatt
      961 ttcccgtcga gggatgcgat gccgatgaag tcgttgctgt gctccacgag ggccgcgaac
     1021 cggctctgtt cctcttccgc ctttactcgc cccgatatgt cctccacgat tccgagccca
     1081 ccttcgagat tcccgtcctc gctgaagaac ggcgtcgtgc gcatcgatat cgtgggctcg
     1141 gcggtgctgt acgtcgcccg gtaccgccct tcgtaatagc catcccgtcc ctcgagcggg
     1201 gccttgaggg cctggtggat cctcctgtcc ttcaacgtct ccatgtcgat gccgaccaag
     1261 agatcccgtc cggaccgcag gatcctcacg aagcagtcgt tcacgtccgt gatccggaga
     1321 tcccggtcgt atcggaagat gcccaccgga gatcgctgga aaatgatccg gtactgttcc
     1381 ctttccgagc accggctctt tccgcgcgga tcttcgccgg acgtgtccga cgcactggtc
     1441 gcatcctcga gtatcacggg acggtcctgc tcccgacccg cgcccgcacc cgtatcccgt
     1501 ccgtcgaaca tgcagatccc cttgccgccc cattccatct ctccgtgggc tcgcggcggc
     1561 acgcccgttc aggaaggtta tcggcagatc cgccggcatc atttaatggg aatcatgacc
     1621 aaacgatttt cccccggccc gacgtttcgc cgcttggcaa agccgccggg caactccttc
     1681 cgatggaggg gacggtcctc atcaccgtct ccgagaggga ccgcgcggga gcgctggagg
     1741 cggcccggcg cttcgcggcg ctggggttct cgatcgtggc cacggcggcc gcgatcgcca
     1801 ccgccaaggg gatctccgcg caccggctgg gccacgccga cgtccgatcc ctccagcagt
     1861 accatgcggg gatcggcggc tgatcccctg tggggcgact tcggatgccg attcccatgc
     1921 cggtgaataa tccgggaatt ctcgtcggag attgcggtag aatacggcaa gatcacccca
     1981 tttcatttca ggaggccgcc tcatgaaaaa agtgatgctt gtcctcacgt cgatcgccgt
     2041 gctgttcgcg tcgggttgcg cgacgaagaa ttacgtcaag acccaggtcg acccgctctc
     2101 cgaccgtatc ggccgtatcg aggccagact gaacgccatg gatggcaagc tcgaccaggc
     2161 cgtgaagacg ggccagttgt cgacggccga tatcaaagcc gccc
//
LOCUS       DATGYW010000016         1906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_429438, whole genome shotgun sequence.
ACCESSION   DATGYW010000016 DATGYW010000000
VERSION     DATGYW010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429438"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..510
                     /gene="ssb"
                     /locus_tag="VK429_00230"
     CDS             106..510
                     /gene="ssb"
                     /locus_tag="VK429_00230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005009857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HLN90264.1"
                     /translation="MVTFNRVILAGNLVRDPETRFLPSGDAVTSFSIAVNSRYKAKST
                     NEVKEEVSFFDVSVFGKTAENCAEYLSKGRPVLVEGRLRQRSWETDGVKRSKIEVVAD
                     NVQFLGGPRGASAEAPASSAPAPESQDDDIPF"
     gene            548..853
                     /gene="rpsR"
                     /locus_tag="VK429_00235"
     CDS             548..853
                     /gene="rpsR"
                     /locus_tag="VK429_00235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004072946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HLN90265.1"
                     /translation="MSTPYKPRPSSSGPRRDDHRGPAGGGKKRYIRKKFCRFCAEKEL
                     AIDYKNAYMIKQFVSERGKIVPRRITGNCAKHQRKLTVEIKKARILALIAFTATQVR"
     gene            864..1310
                     /gene="rplI"
                     /locus_tag="VK429_00240"
     CDS             864..1310
                     /gene="rplI"
                     /locus_tag="VK429_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011417779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HLN90266.1"
                     /translation="MKIILREDVEKLGKAGEVVKVKDGYGRNYLIPRQLAVLANVRNM
                     KALDHDRRTIETRAKKTRKASEATAATLSAVSLTLPAKAGEEGKLFGAITSRDIAEAL
                     GKAGVTVDRKAIQLADPIKQVGDYKVKIRVAADVLPEISVSVVPEA"
     gene            1347..>1906
                     /locus_tag="VK429_00245"
     CDS             1347..>1906
                     /locus_tag="VK429_00245"
                     /inference="COORDINATES: protein motif:HMM:NF012974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
                     /protein_id="HLN90267.1"
                     /translation="MDENRGTTPGGNDASLRVPPHDLHAEQAVLASVLLNNDLINGVM
                     EVLRPGDFYQGAHRILYEAMVDLYDRGRPIDQLTLSAVLKDRNAEQQVGGLAYLSEIV
                     TSVPISDNVVHYARIVKEKSILRKTISAAQEISAAAFQGVADIDVFLDRTEQAIFAIA
                     EEKIRPSYYAMGEMAREAMKEIEEAY"
BASE COUNT          382 a          636 c          624 g          264 t
ORIGIN      
        1 ggagacgccc ctgcagactc cgggacgccc gcgcccgaaa cgcccgaggc gccgccggcc
       61 gcccccgccg cggaagcctg acgggaaggg caagggagaa tcccgatggt caccttcaac
      121 cgtgtcattc tcgccggcaa cctcgtgcgg gacccggaaa cgcgctttct cccttccggg
      181 gatgccgtta ccagcttcag catcgcggtg aactcgaggt acaaggcgaa atcgaccaac
      241 gaggtcaagg aagaggtctc cttcttcgat gtttcggtgt tcgggaagac ggccgagaat
      301 tgtgccgagt acctttccaa gggccgcccc gtcctggtcg aggggcgcct gcggcagcgc
      361 agctgggaga ccgacggcgt gaagcggagc aagatcgagg tcgtggcgga caacgtccag
      421 ttcctcggcg gaccgcgcgg cgcgtcggcg gaagcccccg catcgtccgc tccggcgccc
      481 gaatcgcaag acgacgatat cccgttctga aaaaaatacg atccggattc caaggaggta
      541 acacccgatg agcaccccgt acaagccccg cccttcatcg tccggtcccc ggcgcgacga
      601 ccatcgcggc ccggccggag gagggaagaa gcggtacatc cgcaagaagt tctgccgctt
      661 ctgcgcggag aaagagctcg cgatcgacta caagaacgcg tacatgatca agcagttcgt
      721 ctccgagcgg gggaagatcg tcccccgccg catcacgggg aactgcgcga agcaccagcg
      781 gaagctgacg gtggagatca agaaggcgcg gatcctcgcg ctgatcgcct tcaccgccac
      841 gcaggtccgg taggagcgcc ccgatgaaga tcatcctgcg cgaggacgtg gagaagctgg
      901 gaaaggccgg cgaggtcgtc aaggtcaagg acggatacgg gcggaactac ctgattccgc
      961 ggcagctggc ggtcctggcg aacgtgcgga acatgaaggc cctcgatcac gatcggcgga
     1021 cgatcgagac gcgggcgaag aagaccagga aggcctccga ggcgacggcg gcgacgcttt
     1081 ccgccgtctc cctcaccctt cccgcgaaag cgggggagga ggggaagctg ttcggcgcca
     1141 tcacttcgcg ggacatcgcg gaggcgctcg ggaaagccgg cgtgaccgtc gaccgcaagg
     1201 cgatccagct cgccgacccg atcaagcagg tgggcgacta caaggtgaag atccgggtgg
     1261 cggccgacgt cctccccgag atctccgtca gcgtggtgcc cgaagcttag cccgcaacac
     1321 caatccactc cggaaggggg gcgtcgatgg acgagaatcg cggcacgacg ccgggcggca
     1381 acgacgcctc cctccgggtt cccccccacg atctccacgc ggaacaggcc gtcctcgcgt
     1441 cggtcctgct gaacaacgac ctgatcaacg gcgtgatgga ggtcctgcgc ccgggcgatt
     1501 tctaccaggg ggcccaccgg atcctctacg aggcgatggt cgacctctac gaccgcgggc
     1561 gccccatcga ccagctcacc ctgtccgcgg tcctgaagga ccggaacgcc gaacagcagg
     1621 tcggcgggct cgcctacctc tccgagatcg tcacctccgt ccccatctcc gacaacgtcg
     1681 tgcactacgc gcgcatcgtg aaggagaagt cgatcctccg caagacaatc tccgcggcgc
     1741 aggagatctc cgccgccgcc ttccaggggg tcgccgacat cgacgtcttc ctcgaccgga
     1801 ccgagcaggc gatcttcgcc atcgccgagg agaagatccg gccctcctac tacgcgatgg
     1861 gcgagatggc ccgcgaggcg atgaaggaga tcgaggaggc gtacga
//
LOCUS       DATGYW010000017         1987 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_108227, whole genome shotgun sequence.
ACCESSION   DATGYW010000017 DATGYW010000000
VERSION     DATGYW010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108227"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..944)
                     /locus_tag="VK429_00250"
     CDS             complement(<1..944)
                     /locus_tag="VK429_00250"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HLN90268.1"
                     /translation="MKGTVLVVDDERNQREILGAILKSEGYVPLLASGGAEALQLLER
                     EAVDLVITDLVMPGMTGEELIDAVLARNPGMPILLSSAYGTIQTAVDAIKKGAYYYFE
                     KPVDRARLLIIVERAIENLHLRESHRMLSEKLFPGVVPILGEHTAIREIKRILPRVAR
                     SESTILLTGESGTGKEVIARNVHSMSGRSAAPFLAVNCASLPDTLFESELLGHERGAF
                     TGAVRREIGLFEAAGGGTIFLDEIAEIKLETQAKLLRALQEKEIRRIGGKENIPVDVR
                     IVAATNRDLDDAVREGKFRADLFYRLNIVKLTLPPLRDR"
     gene            complement(941..>1987)
                     /locus_tag="VK429_00255"
     CDS             complement(941..>1987)
                     /locus_tag="VK429_00255"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN90269.1"
                     /translation="RDLVVPVKVVGDTLGYIHLRLKIDDFTEPIRRNLYLRLFTTLLI
                     FSGGLVLAVIISAHYVSPVVRLAHAAENVAAGDLSQELPVEGKDEVGRLTRSFNEMIV
                     RLRQNRALEEAVRENRYLTHLGKLSSGMAHEIRNPLNFIGLAVDHIGAMTEGKGAEGE
                     AEKRQVIGRIKEEIGRLNDLVTNFILYGRPPELHRAAVRIPELAVGVLRMAEERLHAQ
                     SITCRTEFVDAREIHADPDMLRRALVNLVGNAIDAMPNGGTLSVSAGLRNDGRYSVVV
                     EDTGIGIPEAERGRIFEPYFTTKASGLGLGLVLTKKIVDAHGGEIFVDSTPGKGTRIE
                     VAFPAGVPLEGTSG"
BASE COUNT          314 a          680 c          638 g          355 t
ORIGIN      
        1 cggtccctaa ggggagggag ggtgagcttc acgatgttca accggtagaa gaggtccgca
       61 cggaacttcc cttcccgcac ggcatcgtcg agatcccggt tcgtggccgc gacgatccgg
      121 acgtcgacgg ggatgttctc cttgccgccg atccggcgga tctccttttc ctgcaaggcg
      181 cgcagcagct tcgcctgggt ctccagcttg atctcggcga tctcgtcgag gaagatcgtt
      241 ccacctcccg cggcttcgaa cagaccgatc tcccggcgga ccgcgccggt gaaggccccc
      301 cgctcgtggc cgagcagctc gctctcgaac agggtgtccg ggagggaggc gcagttgacc
      361 gcgaggaacg gggcggcgct gcggccgctc atggaatgga cgttgcgggc gatcacctcc
      421 ttccccgtgc cgctctcgcc ggtgaggagg atggtgctct cgctcctcgc gacgcggggc
      481 aggatccgct tgatctcccg gatcgcggtg tgctcgccga ggatcgggac gacgccgggg
      541 aagagcttct ccgacagcat ccggtgggac tcgcgcaggt gcaggttctc gatggcccgt
      601 tcgacgatga tcagcaggcg ggcccggtcg accggttttt cgaagtagta gtacgccccc
      661 ttcttgatcg cgtcgaccgc cgtctggatc gtgccgtagg cgctgctgag aaggatgggc
      721 atcccggggt tgcgggcgag gaccgcgtcg atcagctcct cccccgtcat ccccggcatg
      781 acgaggtcgg tgatcacgag gtcgacggcc tcccgctcga ggagctgcaa ggcctccgcc
      841 cccccggagg ccagcagcgg gacgtaccct tcgctcttga ggatcgcgcc gaggatctcc
      901 cgctggtttc gctcgtcatc gacgacgagg acggtcccct tcatcctgac gtcccctcca
      961 aggggacccc cgccggaaac gcaacctcga tccgcgtccc ttttccgggg gttgaatcca
     1021 cgaagatctc ccccccgtgg gcgtcgacga tcttcttcgt aaggacgagc ccgagcccca
     1081 gcccggacgc cttggtggtg aagtacggct cgaagatcct tccccgttcc gcctccggga
     1141 tgccgatacc cgtgtcctcg acgacgacgg agtatctccc gtcgttccgg agtcccgcgg
     1201 aaacggagag cgttccgccg ttcggcatcg cgtcgatcgc gttccccacc aggttcacca
     1261 gcgctctccg cagcatgtca ggatcggcgt ggatctcccg ggcatccacg aactccgtgc
     1321 ggcaggtgat cgattgcgcg tgcaggcgct cctccgccat ccgaagcacc ccgaccgcaa
     1381 gctcggggat ccgcacggcc gcacggtgca actcgggggg acgcccatag aggatgaagt
     1441 tggtcacaag atcgttcagc cgcccgatct cctccttgat ccgaccgatc acctggcgct
     1501 tctccgcttc cccctcggcc cccttcccct cagtcatcgc gccgatgtgg tccaccgcga
     1561 gcccgatgaa gttgagcggg tttcggatct cgtgggccat ccccgaggag agcttcccga
     1621 gatgcgtcag gtaccggttc tcccggaccg cctcctcgag cgcccggttc tgccggagcc
     1681 gtacgatcat ctcgttgaag gaacgggtga gccgtcccac ctcgtccttc ccctcgacgg
     1741 gaagctcctg cgatagatcc ccggcggcca cgttctcggc ggcgtgcgcc agacgcacca
     1801 cgggggagac gtagtgggcg gagatgatga ccgcaaggac gagcccgccc gagaagatga
     1861 ggagggtggt gaagaggcgc agatagaggt tccgccggat cggctcggtg aagtcgtcga
     1921 tcttcaatcg caagtggatg tatccgaggg tgtcccccac caccttgacc ggcaccacaa
     1981 ggtcccg
//
LOCUS       DATGYW010000018         2499 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_108270, whole genome shotgun sequence.
ACCESSION   DATGYW010000018 DATGYW010000000
VERSION     DATGYW010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2499
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108270"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..643
                     /locus_tag="VK429_00260"
     CDS             <1..643
                     /locus_tag="VK429_00260"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLN90270.1"
                     /translation="VSHLHSDHVNGSAVACCARFEIPIHLHRKNLDGFSKKVLSRSPG
                     SCPVRPFMDGETFTIGAIGIEPFRVPHDARGVTCGFTLTSASRDVRVSMATDLGQNEN
                     GLFERFLDSDLILIEANYDEEMLNRSPRLDRGRVGSNVGHFSNAQAGKFLVRVLQESR
                     KCPQAVVLCHLSADHNTPELARRTVREILSDHRFGDVPVHAARREGPSRMFTV"
     gene            716..1336
                     /locus_tag="VK429_00265"
     CDS             716..1336
                     /locus_tag="VK429_00265"
                     /inference="COORDINATES: protein motif:HMM:NF024833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YMGG-like glycine zipper-containing protein"
                     /protein_id="HLN90271.1"
                     /translation="MRNIVTFGVIAALFVAILPGCAAQNGGMREHKGAAVGAGTGAVG
                     GAVVGGLLGGKRGAVAGGLLGALAGGLLGNYYDEREKNLAETRRAHTEYDAAKGTRLK
                     IERVRTNPPTAAPGDTVEIQLTYAVLTPREDVMVPVRESREILFNGSKVGEASVDIER
                     EGGTWRSVVPITLPGNARPGSYRVVASVESRGGGKDVEEITFRVRK"
     gene            1404..>2499
                     /locus_tag="VK429_00270"
     CDS             1404..>2499
                     /locus_tag="VK429_00270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017873526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HLN90272.1"
                     /translation="MKTTLRKQDLDLLVGARHWDPFSVLGPHVVEEKGKRYVSVRVIQ
                     PRAREVQVIRDTDATRRASMTRIHPDGVFEALFPLDAEIFPYRLEITGGDGYRWTQHD
                     PYAFGTVLTDFDIHLLSEGSHLAQYEKLGSHLVDIGGIRGTAFAVWAPNAERVSVVCN
                     FNHWDGRVHPMRNRGESGIWEIFLPGVVEEEVYKYEIRARDTGELLAKTDPFGFRFEL
                     PPRTGTIVCSIEGYEWRDASWLESRARRSVLEAPMAVYEVHLGSWKRKEGEGGPYLSY
                     RELADDLVPYVKEMGYTHIELLPVAEHPFDGSWGYQVLGYFAPTSRHGRPAEFMEFVD
                     RCHREGIGVILDWVPAHFPRDAHGLARFDGT"
BASE COUNT          415 a          839 c          864 g          381 t
ORIGIN      
        1 ggtctcccac ctccacagtg accatgtgaa cggctccgcg gtcgcatgct gcgcccggtt
       61 cgagattccg atccacctcc accggaaaaa ccttgacggg ttctcgaaga aggttctctc
      121 ccggtccccc ggctcctgcc ccgtccgccc gttcatggac ggcgagacgt tcaccatcgg
      181 tgcgatcggg atcgagccgt tccgcgttcc ccacgacgcg cggggggtca cctgcggttt
      241 caccctcacg tcggcttccc gggacgtccg cgtgtcgatg gcgaccgacc tcggccagaa
      301 cgagaacggc ctcttcgagc ggttcctcga cagcgacctg atcctgatcg aggcgaacta
      361 cgacgaagag atgttgaatc gcagcccccg gctcgaccgg ggacgggtgg ggtcgaacgt
      421 gggacacttc tcgaacgccc aggcagggaa gttcctggtg cgggtcctcc aggagagccg
      481 gaaatgcccg caggccgtcg tcctgtgcca cttgagcgcg gatcacaaca cgccggaact
      541 ggcccggcgc accgtgcggg agatcctctc cgaccaccgc ttcggcgacg tgccggtcca
      601 cgcggcccgg agggaaggac cgtcgcggat gttcaccgtc tgacgctggt ttttccttga
      661 atacggcgag cgtcgaatgc gtcaaaaagc ctggagaaac cgcgggaggg tgttcatgcg
      721 aaacatcgtg accttcgggg taatcgccgc cctgttcgtg gcgatcctgc ccgggtgcgc
      781 ggcgcaaaac ggggggatgc gggagcacaa gggggcggcg gtcggcgccg ggaccggggc
      841 ggtgggcgga gcggtcgtcg gagggctgct cggcggaaag cgcggcgcgg tcgccggcgg
      901 gctgctgggc gcgctcgccg gcggtctcct cggcaactac tacgacgagc gggagaaaaa
      961 tctcgcggag acacggcgcg cccacacgga gtacgacgcg gccaagggaa cgcgcctcaa
     1021 gatcgaacgg gtgcggacca acccccccac ggccgccccc ggcgacaccg tggagatcca
     1081 gctgacgtac gcggtcctca ccccgcggga agacgtgatg gtccccgtgc gggagagccg
     1141 agagatcctc ttcaacggca gcaaggtggg ggaagcctcg gtcgacatcg agcgcgaggg
     1201 aggcacctgg cgctccgtcg tccccatcac cctgcccggg aacgcccgtc cggggagcta
     1261 ccgcgtcgtc gcctcggtgg agtcgcgcgg cggagggaag gacgtcgagg agatcacgtt
     1321 ccgcgtgcgc aagtgacgca atccgcgagg ccgaccacca cggcggcccc ttctctttcc
     1381 gtttccgcta caattgaggg gcgatgaaga ccaccctccg gaagcaggac ctcgacctcc
     1441 tcgtcggcgc ccgtcactgg gaccccttct ccgtcctcgg cccccatgtc gtggaggaga
     1501 aaggaaagcg gtacgtttcc gtgcgggtga tccagccgcg ggcccgcgag gtccaggtga
     1561 tccgcgacac cgacgcgaca cggcgcgcct ccatgacccg catccacccc gacggggtgt
     1621 tcgaggcgct cttcccgctc gacgcggaga tcttcccgta ccggctcgag atcaccggcg
     1681 gcgacggcta ccggtggacg cagcacgacc cctacgcgtt cggaacggtc ctcaccgact
     1741 tcgacatcca tctcctgtcc gaagggagcc acctggcgca gtacgagaaa ctggggagcc
     1801 atctcgtcga catcggcggg atccggggga cggcgttcgc ggtgtgggcg cccaacgcgg
     1861 agcgcgtctc cgtcgtctgc aatttcaacc attgggacgg ccgcgtgcac ccgatgcgca
     1921 accggggaga gtccgggatc tgggagatct tcctccccgg cgtcgtcgag gaggaggtct
     1981 acaagtacga gatccgcgcc cgggacacgg gggagttgct cgccaagacc gacccgttcg
     2041 gcttccggtt cgagctcccg ccgcggacgg gaacgatcgt ctgctccatc gagggatacg
     2101 agtggcggga tgcatcctgg ctggagagcc gggcgcggcg aagcgtcctc gaggcgccga
     2161 tggcggtgta cgaggtccac ctcggctcct ggaaacggaa ggagggcgag gggggaccgt
     2221 acctgtcgta ccgggagctg gccgacgacc tcgttcccta cgtcaaggag atggggtaca
     2281 cccacatcga actcctcccg gtggcagagc atccgttcga cggttcgtgg gggtaccagg
     2341 tgctcggcta cttcgctccg acgtcgcgcc acggtcgccc ggcggagttc atggagttcg
     2401 tcgaccggtg ccaccgcgag gggatcggcg tgatcctcga ctgggtgccg gcccacttcc
     2461 cccgcgacgc ccacgggctg gcgcggttcg acgggaccc
//
LOCUS       DATGYW010000019         1917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_54946, whole genome shotgun sequence.
ACCESSION   DATGYW010000019 DATGYW010000000
VERSION     DATGYW010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54946"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(42..>1917)
                     /gene="cooS"
                     /locus_tag="VK429_00275"
     CDS             complement(42..>1917)
                     /gene="cooS"
                     /locus_tag="VK429_00275"
                     /EC_number="1.2.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005808331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018492 - carbon-monoxide dehydrogenase
                     (acceptor) activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="anaerobic carbon-monoxide dehydrogenase
                     catalytic subunit"
                     /protein_id="HLN90273.1"
                     /translation="RKAANDGVELVTDRLRKMMPECGFGELGTCCTICYMGPCRIDPF
                     GQGTRTGVCGATPDVIVARNFLRSATGGASSHAGHARELAILLLEIAEGKAPGYRIRE
                     EGKLLSLAGKLGVPVDGRPVNAVAADVARKAFEDFGRQDGQPMNWIRARASRMEYAKW
                     EKLGLIVSNPHNEIETAMHRTSMGNDADPLNLWVASLRMGMVDNFAGLMLATDLSDII
                     FGIPTPKVVTANYSVLKEGEVNIACHGHNPILASKVAEWADRLEGEAKAAGAGRVNVV
                     GICCIGNELVTRFGIPYAGHEAQTELFLATGAIDAMVVDMQCIMPSLPVIAKCYKTRF
                     ITTVPFVRHPEAIHVDFRPEAADERAQEIVRHGIAAFKERKAAGIRPRIPDVSSKLLT
                     GISVETLVSVLSAVDAKDPLKPVIDAIAAGDVLGAVGMVGCPNPKLRDGAMSERMAEG
                     LLRNNVLIVTTGCVNHILAQGGFLTSEATERYAGPRLKKVLTAIGQAAGLGGPLPPVL
                     HMGSCVDNSRIYDLLAALAGKLGVEISQLPVAGSAPEFITEKAISIGSFFLAAGILVH
                     VAPAPRVFGSPFAVSLLTEKLPGLNGGKVLVAATPDAAVSGILAHLREKRQALGLPQA
                     "
BASE COUNT          289 a          707 c          609 g          312 t
ORIGIN      
        1 cccgacgatc agaacccgtt ccatcgattc tcccgttccg gtcaggcctg cggaaggccc
       61 agcgcctgcc gcttctcccg gaggtgggcg aggatccccg agaccgcggc gtcgggcgtc
      121 gcggccacga gcaccttccc cccgttcagt cccgggagtt tctccgtcag gagcgaaacg
      181 gcgaaggggc tcccgaagac cctcggcgcg ggcgccacgt ggaccaggat cccggcggcc
      241 aggaagaagg agccgatcga gatcgccttc tcggtgatga actccggcgc ggagccagcg
      301 accgggagct ggctgatctc gacgcccagc ttccctgcga gcgcggccag cagatcgtag
      361 atcctcgagt tgtccacaca cgaccccatg tggaggactg gcggcagggg accccccagc
      421 ccagccgcct gcccgatcgc ggtcagcacc ttcttcaacc gcggcccggc gtaccgttcg
      481 gtggcctcgc tcgtcaggaa cccgccctgc gcgaggatgt ggttcacgca ccccgtggtc
      541 acgatgagga cgttgttccg gagaagcccc tcggccatcc tctcggacat cgccccgtcc
      601 cgcagcttcg ggttcggaca cccgaccatt cccaccgccc ccaggacgtc cccggccgcg
      661 atcgcgtcga tgaccggctt gagcgggtcc ttcgcgtcga cggcggagag gacggagacg
      721 agcgtttcga cggagatgcc cgtcagcagc ttcgacgaga cgtcggggat ccggggacgg
      781 atcccggccg ccttccgttc cttgaacgcc gcgattccgt gccggacgat ctcctgcgcc
      841 cgctcgtccg ccgcctcggg ccggaagtca acgtggatcg cctccgggtg ccggacgaag
      901 gggacggtcg tgatgaaccg ggtcttgtag cacttcgcga tcacgggcag ggacggcatg
      961 atgcactgca tgtcgacgac catcgcgtcg atcgccccgg tggcgaggaa gagctccgtc
     1021 tgcgcctcgt gcccggcgta ggggatcccg aaccgcgtca ccagctcgtt cccgatgcag
     1081 cagatcccca ccacgttcac ccgcccggcg ccggccgcct tcgcctcccc ctcgagccgg
     1141 tcggcccact ccgccacctt cgaggcgagg atcgggttgt gcccgtggca ggcgatgttc
     1201 acctcccctt ccttcaggac cgaatagttc gccgtgacca ccttgggcgt gggaatcccg
     1261 aaaattatgt cggagaggtc ggtggccagc atcagccccg cgaagttgtc gaccatcccc
     1321 atcctcaagc tcgcgaccca caggttcagc gggtccgcgt cgttccccat cgacgtgcga
     1381 tgcatcgccg tctcgatctc gttgtggggg ttggagacga tgagccccag tttttcccac
     1441 ttcgcgtact ccatccggga agcccgggcg cggatccagt tcatcggctg cccatcctgg
     1501 cggccgaagt cctcgaacgc cttccgggcg acgtccgccg ccaccgcgtt gaccggccgc
     1561 ccgtcgacgg gaacgcccag cttccccgcg agggacagaa gtttcccctc ctcccggatc
     1621 ctgtacccgg gcgccttccc ctcggcgatc tcgagcagca ggatcgccag ttcccgcgcg
     1681 tggccggcgt gggaggaggc ccctcccgtg gccgaccgga gaaagttccg cgccacgatg
     1741 acgtcggggg tcgccccgca gacgccggta cgggtcccct ggccgaacgg gtcgatccgg
     1801 cacggcccca tgtagcagat cgtgcagcac gtcccgagct ctccgaaacc gcactcgggc
     1861 atcatcttcc tgagccggtc cgtgacgagt tcgacgccgt cgttcgccgc cttgcgg
//
LOCUS       DATGYW010000020         1795 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_551, whole genome shotgun sequence.
ACCESSION   DATGYW010000020 DATGYW010000000
VERSION     DATGYW010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_551"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..>1795)
                     /locus_tag="VK429_00280"
     CDS             complement(35..>1795)
                     /locus_tag="VK429_00280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015435621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic beta 1-2 glucan synthetase"
                     /protein_id="HLN90274.1"
                     /translation="RNGSLRSPAAMAHARLSGKVGAALDPCAAIQVPFELADGQEREI
                     VFRLGAGKNADDARNLVHRLRGSAAAREVLESVWQYWKRTLGAVQVETPDPAVNVLAN
                     GWLLYQTLSCRVWARSGYYQSGGAFGFRDQLQDAMALVHTAPHLLREHLLRCAARQFR
                     EGDVQHWWHPPSGRGVRTKCSDDFLWLPLATCRYVLTTGDTGVLDEPVHFIEGRPVNV
                     EEDSYYDLPVRSEEAASLYDHCRRAILRGLGTGAHGLPLMGTGDWNDGMNLVGEHGKG
                     ESVWLGFFLYEVLRQFTEVARNAGDLTFAERCRAEAAKVRLNIEENGWDGEWYRRAYF
                     DDGAPLGSAGNDECQIDSIAQSWSVLSGAGEAGRSRMAMDAVDQRLVRRDHSLIQLLN
                     PPFDKSALNPGYIKGYVPGVRENGGQYTHAAIWAAMAFAALGDSRRAWELLGMINPVT
                     HSKSPEGIAIYKVEPYVVAADVYALPPHTGRGGWTWYTGSAGWLYRLIVESLLGLKLE
                     VDKLRFVPCLPADWKGFKVYYRYRETGYEIDIRQQPGEEGRTIVTVDGMERQDDVIPL
                     VDDRRNHSVEIVSIRSPIRS"
BASE COUNT          323 a          618 c          535 g          319 t
ORIGIN      
        1 ggcctgccat agccgaaccg atattgccgg atgatcagga acgaatgggg gaccggatgg
       61 atacgatctc gaccgaatga ttccggcggt cgtccacaag gggaataaca tcgtcctgcc
      121 gctccatccc gtcaacggtc acgatcgtcc ggccttcctc cccgggttgt tggcggatat
      181 cgatttcata gcccgtctca cgataccggt agtacacctt gaaccctttc caatccgcgg
      241 ggaggcacgg aacaaaccgc agtttgtcca cttccagctt caggcccagg agggattcca
      301 cgatcagccg gtacaaccag ccggccgagc ccgtgtacca ggtccatcct ccgcgcccgg
      361 tgtgcggcgg gagcgcgtag acgtcggccg cgaccacgta cggttccacc ttgtagatcg
      421 cgatcccctc cggtgacttc gagtgggtca ccgggttgat catccccaac agttcccacg
      481 cgcgccggct gtcccccaat gcggcgaacg ccatcgccgc ccagatcgcc gcatgcgtgt
      541 attgaccgcc gttttccctc acacccggga cgtacccttt tatgtagccg ggattcaggg
      601 ccgatttgtc gaacggcgga ttcaggagct ggatcaacga gtggtcccgg cgaacgagac
      661 gctgatccac cgcgtccatc gccatgcggg atcgcccggc ttcaccggcc cccgagagaa
      721 ccgaccagct ttgcgcgatc gaatcgatct ggcattcatc gttgcccgcc gatccgagcg
      781 gtgcgccgtc gtcgaaatac gcgcggcggt accactcgcc atcccagccg ttctcctcga
      841 tattcaggcg cactttggcc gcctctgccc ggcaacgttc ggcgaaggtc aaatcaccgg
      901 cattgcgtgc gacctcggtg aactgcctga gcacttcata aaggaagaac cccagccaga
      961 cgctttcccc tttgccgtgc tctcccacaa ggttcatccc gtcgttccag tcaccggtcc
     1021 ccatgagcgg caggccgtgc gcgccggtcc cgaggcctct caggatggct cgcctgcaat
     1081 ggtcgtacag gctggccgct tcttccgacc ggacgggaag atcgtagtag gaatcttcct
     1141 ccacgttcac agggcgccct tcgatgaagt ggacaggttc gtccaacacc ccggtatccc
     1201 ccgtggtgag aacgtaccgg cacgtcgcca ggggcaacca gaggaaatca tcggaacatt
     1261 tcgtacgcac gccccggccc gatgggggat gccaccagtg ctggacgtct ccctcccgga
     1321 actggcgggc cgcgcatcgc agcaggtgct cgcgcagaag gtgcggcgcg gtgtgcacca
     1381 gcgccatggc gtcctgcaac tggtcgcgga acccgaaggc gccccccgac tggtagtatc
     1441 cgctccgggc ccagacacgg catgacaggg tctggtaaag gagccacccg ttggccagga
     1501 cgttgacggc cgggtccggg gtttccacct gcaccgctcc gagagtccgc ttccagtact
     1561 gccagacgga ttcaagcact tcacgagccg ctgcggatcc gcgaaggcga tgcaccaggt
     1621 tcctggcgtc gtccgcgttt ttccccgcgc cgaggcgaaa gacgatctcg cgctcctgcc
     1681 cgtcggccag ctcgaacggc acctggatcg cggcacaggg atccagagcg gcccctactt
     1741 tgcccgaaag gcgcgcatgg gccatggcgg ccgggctccg gagcgagccg ttacg
//
LOCUS       DATGYW010000021         1737 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_429617, whole genome shotgun sequence.
ACCESSION   DATGYW010000021 DATGYW010000000
VERSION     DATGYW010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429617"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1737)
                     /gene="dnaE"
                     /locus_tag="VK429_00285"
     CDS             complement(<1..1737)
                     /gene="dnaE"
                     /locus_tag="VK429_00285"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HLN90275.1"
                     /translation="MDDTLKLLKELRGIEIDPNALELTDAETYEVLGRGDTVGVFQAE
                     SAGFTKLVKSLKPDQFNHLIDLVALHRPGPLQSGMADDFVERRHGRRKVEFLHPQLKE
                     ILGDTYGVIVYQEQVMEIAKALAGFTLGEADLLRKAMGKKDDALMERQKAHFLEGAKG
                     HGIPEAKAAAIFDLMAQFGGYGFNKSHSAAYALLAYQTAYLKTHYPVEYFSALMTSES
                     GDTDKIIRYIGYCREKGIPILPPDVNESRFAFFPSDRAIRFGLSAIKGLGASAIEAIL
                     EARAESPFRTVPDLLARVDLRKVNKRAVESLIKSGALDSLDPDRGKVFGDLPALLEDA
                     QAEVRRRESGQFALFGETSAGRPRRRERKGETAAPSWSRPQRLTFEKETLGFYITGHP
                     MDSFAGEIALYANTTTGKLSGLKGDAEVRIGGIVTGLKERMTRRGEKMATWTLEDLEG
                     TVEVVVFPKTLPESRETLASPEPVFLVGKLKFEEQGIKIHADEVFRMENVRERLAKSV
                     HFHLLLDRMTPGDIADLRQTILRNAGEKKGFLHVIRPGEFDAVISLPDGCGVTPSLEL
                     ARDLRSRFGYDVL"
BASE COUNT          268 a          597 c          536 g          336 t
ORIGIN      
        1 cagcacgtcg tagccgaacc ggctgcgaag gtcccgcgcc agctccaggg acggcgtcac
       61 accgcagcca tcgggcaggg agatcaccgc gtcgaactcc cccggacgga tcacgtggag
      121 gaaccccttc ttctccccgg cgtttcgaag gatcgtctgc cgcaggtcgg cgatgtcccc
      181 gggggtcatc cggtcgagca ggagatggaa gtgcaccgat ttcgcgagtc tctcccggac
      241 gttctccata cggaacactt cgtcggcgtg gatcttgatt ccctgctcct cgaatttcag
      301 cttgccgacg aggaagaccg gctcgggact tgccagcgtt tcacggcttt ccgggagcgt
      361 tttgggaaag acgacgacct cgaccgttcc ctcgagatcc tccagcgtcc aggtggccat
      421 cttctccccc cgccgggtca tcctctcctt cagccccgtg acgatgccac cgatcctgac
      481 ctcggcgtcg cccttcaagc cggaaagctt gccggtggtc gtgttcgcgt acagcgcgat
      541 ctccccggcg aacgaatcca tcgggtgccc ggtgatgtag aaccccagcg tctccttctc
      601 gaaggtgagc cgctgcgggc gggaccacga aggcgccgca gtttcccctt tccgttcccg
      661 cctccggggc ctccctgcgg acgtttcccc gaaaagcgcg aactggccgg actcgcgcct
      721 gcggacctcc gcctgcgcgt cctcgaggag cgcggggaga tccccgaaca ccttgccgcg
      781 gtccgggtcg agggagtcga gcgccccgga cttgatcagg ctctccaccg cccgcttgtt
      841 caccttccgc aggtcgaccc gcgcgaggag gtcggggacg gtgcggaaag ggctctccgc
      901 gcgcgcctcg aggatggcct cgattgccga cgctccgagc cccttgatgg cggatagtcc
      961 gaagcggatc gcccggtcgg agggaaagaa ggcgaaccgc gattcattca cgtccggagg
     1021 gaggatcggg atcccctttt cccggcagta cccgatgtat cttattatct tatcggtgtc
     1081 cccggactcg gaggtcatca gggcgctgaa atactccacg gggtaatgcg tcttgaggta
     1141 cgcggtctgg tacgcgagca gcgcatacgc cgcgctgtgg gacttgttga agccgtaccc
     1201 gccgaactgc gccatcaggt cgaagatcgc ggccgccttc gcctcgggga ttccgtgccc
     1261 cttcgccccc tcgaggaagt gggccttctg ccgctccatc agcgcgtcgt ccttcttccc
     1321 catcgctttc cggaggagat cggcctcgcc cagcgtgaag ccggccagcg ccttggcgat
     1381 ctccatcacc tgctcctggt agacgatgac gccgtacgtg tccccgagga tctccttcag
     1441 ctggggatgg aggaactcca ccttcctcct cccgtgtcgc cgctccacga aatcgtccgc
     1501 catgccgctc tggagggggc cggggcggtg cagtgcgacc aaatcgatca ggtggttgaa
     1561 ctggtcgggc ttgaggctct tgacgagctt cgtgaacccc gcgctctcgg cctggaagac
     1621 ccccaccgtg tcgccgcgtc ccagcacctc gtacgtttcc gcgtcggtga gctccagggc
     1681 gttcgggtcg atctcgattc cgcggagttc cttcaaaagc ttcagcgtgt cgtcgat
//
LOCUS       DATGYW010000022         2125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_429690, whole genome shotgun sequence.
ACCESSION   DATGYW010000022 DATGYW010000000
VERSION     DATGYW010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429690"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..809
                     /gene="leuB"
                     /locus_tag="VK429_00290"
                     /pseudo
     CDS             1..809
                     /gene="leuB"
                     /locus_tag="VK429_00290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012039841.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
     gene            814..1851
                     /locus_tag="VK429_00295"
     CDS             814..1851
                     /locus_tag="VK429_00295"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007293181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HLN90276.1"
                     /translation="MSGKRFNVAVAGATGAVGGVFLQILAERKFPIGNLRLLASERSV
                     GKKLKFAGQEFPVELLSKDAFKGIDIALFSAGASRSKEFAAAAWASGAVVVDNSSAFR
                     MEPDIPLVVPEINPQAIGQYKQRGIVANPNCTTIISIMPLKPLHDYGTLKRVVASSYQ
                     ATSGAGAKAMAELVAQTKAFAKGEPLEVAAFKHQIALNVIPHIDAFLDNGYTKEEMKM
                     TNEGRKIMGIPDLRVTCTTVRVPVLTAHSISINAQFEKKITREKARELIAKFPGCQVM
                     DDPANNVYPMPLFAAGKDDCYVGRIREDDSAENCLNLWVCGDQLRKGAALNAVQIAEV
                     LAQKYLQPAAV"
     gene            1973..>2125
                     /locus_tag="VK429_00300"
     CDS             1973..>2125
                     /locus_tag="VK429_00300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HLN90277.1"
                     /translation="MRRIQLRVAYDGTAYAGWQIQPNGPTLQATVEEVLARILQEPVR
                     VRAAGRT"
BASE COUNT          384 a          672 c          742 g          327 t
ORIGIN      
        1 gcaaggagct ggggctcttc gcgaacctgc gtcccgcggt cgtgttcgcc ccgctgctcg
       61 acgcgtcccc gctgcgccgg gagctggtcg aagggatcga cctgatggtg gtgcgggagc
      121 tgacgggcgg gatctacttc ggggaacctc gtggcgtgta gttcatcgat ggcgtggaga
      181 cggggatcaa cacggagatc tacacccggc ccgagatcga gcgggtcgcc cgcgtcgcgt
      241 tcgatctgtc ccgaaagcgc tcccggcggg tcacctccgt ggacaagtcg aacgtcctcg
      301 aggcgacgga gctgtggcgc aaggtggtgt ccgaggtggg cgcgaaggag taccccgacg
      361 tggcgctctc ccacatgctg gtcgacaact gcgcgatgca gctcatccgc aacccgcggc
      421 agttcgacgt ggtggtgacg accaacctct tcggcgacat cctcaccgac gaggcgtcga
      481 tgatcaccgg gtcgatcggg atgctgccgt ccgcctccat cgggggaaag gtggggatgt
      541 acgagccgat ccacggcagc gcccccgaca tcgcggggaa gggggtcgcg aaccctcttg
      601 cgacgatact ttccgtcgca atgatgttaa aatattcgtt tgatatgccc gcggaggccg
      661 cccggatcga gaaggcggtg gagcgggtac tcgccgacgg gtaccggacg ggcgacatct
      721 accgcgaggg cgaggggaaa aaggtcggaa cggccgaaat gggcgaccgg gtccgggacg
      781 ccgtcctgaa ccaataccag aagaggtgag gcgatgagcg gcaagagatt caacgtggcc
      841 gtggccggcg cgaccggcgc ggtaggtggc gtattcctgc agatcctggc ggagcggaag
      901 ttcccgatcg ggaacctgcg ccttctcgcg tccgagcgct ccgttggaaa gaaactgaag
      961 ttcgccgggc aggagtttcc cgtcgagctg ctctcgaagg acgccttcaa ggggatcgac
     1021 atcgccctgt tctccgcggg cgcctcgcgc agcaaggagt tcgccgccgc ggcgtgggcc
     1081 tcgggcgcgg tcgtcgtcga caattcctcc gcgttccgga tggagcccga catccccctg
     1141 gtggtccccg agatcaaccc gcaggcgatc ggccagtaca agcagcgcgg gatcgtcgcg
     1201 aacccgaact gcacgacgat catctcgatc atgccgctca agcccctgca cgactacggc
     1261 accttgaagc gggtcgtcgc gtcgtcgtac caggcgactt ccggagcggg ggccaaggcg
     1321 atggcggagc tggtcgccca gacgaaggcc ttcgccaagg gcgagccgct cgaggtggcg
     1381 gcgttcaagc accagatcgc cttgaacgtc atcccgcaca tcgacgcctt cctcgacaac
     1441 gggtacacga aggaagagat gaagatgacg aacgaggggc gcaagatcat ggggatcccc
     1501 gacctgcgcg tcacctgcac cacggtgcgc gtgccggtgc tgaccgccca ctcgatctcg
     1561 atcaacgccc agttcgagaa gaagatcacg cgggagaagg cgagggagct gatcgcgaag
     1621 ttccccggat gccaggtgat ggacgacccg gcgaacaacg tctacccgat gccgctgttc
     1681 gcggcgggga aggacgactg ctacgtcggg cgtatccggg aggacgacag cgccgagaac
     1741 tgcctgaacc tgtgggtgtg cggcgaccag ctccgcaagg gggcggctct gaacgcagtg
     1801 cagatcgccg aggtcctcgc gcagaagtat ctgcagcccg cggccgtctg accgccgccg
     1861 gggaacgcgt ggccccgaac gatgcagcaa gcgccgggag cggggggcat tccttcgctc
     1921 ccggtttttt ccccttcccg acctccctgg gatccttccg ggtgcgccgc ccttgagacg
     1981 catccagctt cgcgtcgcgt acgacggaac ggcgtacgcc ggatggcaga tacagccgaa
     2041 cgggccgacc ctccaggcga cggtggaaga ggtgcttgcc cggatcctgc aggagccggt
     2101 gcgcgtccgg gccgcgggac gcacc
//
LOCUS       DATGYW010000023         1684 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_322566, whole genome shotgun sequence.
ACCESSION   DATGYW010000023 DATGYW010000000
VERSION     DATGYW010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322566"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            183..836
                     /locus_tag="VK429_00305"
     CDS             183..836
                     /locus_tag="VK429_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011736714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0015159 - polysaccharide transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis/export family
                     protein"
                     /protein_id="HLN90278.1"
                     /translation="MQKAPPPAEEYRIQAGDQLDIKFFYNKDLNEQVTVRPDGRISLQ
                     LVKTVVAAGLTPEQLTDQLTKAYGAHLKDPEVAVIVRSFSSQRIYVDGEVGKPGMITL
                     TGPTTVRQAISQAGGFLYTGNATDVLLIRQGPGNQTLATMVNMQKVLDGTDPSQDIYL
                     KPFDIVYVPKTAITNANLWIEQYLTRMVPRIGFTAAFPVGTGIIGVDTTSTIITPAK"
     gene            862..>1684
                     /locus_tag="VK429_00310"
     CDS             862..>1684
                     /locus_tag="VK429_00310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011736713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Wzz/FepE/Etk N-terminal domain-containing
                     protein"
                     /protein_id="HLN90279.1"
                     /translation="MNPPGSEIEKYVPLEQEQQAGGVRDFLTILFKHRSKVWVIFLAT
                     VLTVTIGSFLIPPTYEAKSSMMVKFGREYVNRPEVGSAQPILLSLNQEEVVNSEIQIL
                     SSRELIEKVLTNLKVETVYPDLAKDPPSKMTPLQAAILAFEKKLTVEGVKKSNVIEVA
                     FQHKDPKVAARAVNLLVDYYKEKHLQVFSDPQSSFLEKQLAEYEQKLKESESRMEAFK
                     QKNRVFSLEEQRSLLLKQRMELDTSLKTTKNQVDELQNKLSSLKSQQKTRTRDKSI"
BASE COUNT          414 a          529 c          457 g          284 t
ORIGIN      
        1 taagtcatcc atttcaaata ataagtggcc attatagcca taaacctcta gtgcaattca
       61 gatcaatcgt tcacggggca acgaccatga gatggatgag acacggactc ctggttttgc
      121 tttttccact tgtcgcctgc tcccatgccg tcaacggaca accgtctccc gcaaccgcgg
      181 gtgtgcagaa ggcccctccg cccgccgaag agtaccggat ccaggcgggg gaccagctgg
      241 acatcaaatt cttttacaac aaagacctga acgagcaggt caccgtccgt ccggacggcc
      301 gcatctccct gcagctcgtc aagaccgtcg tggcggccgg gctgacgccg gaacagctca
      361 ccgatcagct caccaaggcc tacggcgccc acctgaagga cccggaagtc gccgtgatcg
      421 tccgctcctt cagttctcaa aggatctacg tggacggcga ggtcggcaaa ccgggcatga
      481 tcaccttgac gggaccgacc acggtccgcc aggcgatctc ccaggcgggc ggtttcctgt
      541 acacagggaa cgcaaccgat gtgttgttga tccgccaggg gcccgggaac cagacgctcg
      601 ccacgatggt gaacatgcaa aaggtcctgg atggaaccga tccgagccag gacatctacc
      661 tgaagccgtt cgacatcgtc tacgttccga aaaccgccat caccaacgcg aatctctgga
      721 tcgaacagta cctgacccgg atggtcccca ggatcgggtt taccgccgcc tttcccgtcg
      781 ggaccggtat catcggggta gacacgacga gcacgatcat caccccggcg aaatagctat
      841 agctaaaaag ggaagggata aatgaaccct ccaggatccg aaatcgagaa atacgtccct
      901 ctcgagcagg aacagcaggc ggggggcgta agggatttcc tcacgatcct gttcaagcac
      961 cggtcgaagg tgtgggtgat cttcctcgcc acggtgctca ccgtcaccat cgggtcgttc
     1021 ctgatccctc ccacctacga ggccaagtcg agcatgatgg tcaagttcgg cagggagtac
     1081 gtgaaccggc cggaggtcgg cagcgcccaa cccatcctgt tgtccctcaa ccaggaagag
     1141 gtggtcaact cggagatcca gatcctctcg agccgcgagc tgatcgaaaa ggtcctgacc
     1201 aacctgaagg tcgagaccgt ctacccggac ctggccaagg accctccctc gaaaatgacc
     1261 cccctccagg cggccatcct cgccttcgag aagaaactca ctgtggaggg agtcaagaaa
     1321 tccaacgtca tcgaggtggc cttccagcac aaggacccga aggtggcggc ccgggccgtg
     1381 aacctcctcg tcgactacta caaggagaaa cacctccagg tcttcagcga cccccagtcg
     1441 tccttcctcg aaaagcagct cgccgaatac gaacagaagc tgaaagaatc ggagagccgg
     1501 atggaggcct tcaagcagaa gaaccgggtc ttctccctgg aagagcagag gagcctcctc
     1561 ctgaagcagc ggatggagct ggacacctcc ctgaaaacca caaaaaacca ggtcgacgag
     1621 ctgcagaaca aactctcttc cctgaaaagc cagcagaaga cccggacgcg ggacaagtcc
     1681 atct
//
LOCUS       DATGYW010000024         2174 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_322889, whole genome shotgun sequence.
ACCESSION   DATGYW010000024 DATGYW010000000
VERSION     DATGYW010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322889"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1352
                     /locus_tag="VK429_00315"
     CDS             <1..1352
                     /locus_tag="VK429_00315"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HLN90280.1"
                     /translation="SWGGELDVRVEGKLPASVVRLAVPSVFDRLDGIVTLEARVTGSR
                     DAPSIVGTGHLEGGTLSFIGYNQLFEGIRADAVMSLEKIVFEHFEGKSGGGYIDGWGE
                     VPLKMDAGQRLYFSVDFLDMRYPYPEDFRPVVQGHVELIGPVDDLLVTGDVDVQSARY
                     TRVLYPEKALVDFSRRLSDTVARREKSEFRVRLDINVVADRTIRIKNNLADIKASGEF
                     KVGGDTSKVIVLGTFDVYEGYVEFYGSRYELKRATVDFQDPRKINPRLDARGETKKGS
                     YNIAVLVTGTMEKPEVDFTSDPPLSRTDIVSLLAFGVTTQKTATSGTGTGQTSGLGGT
                     AAIAIGSTVGVDEKIRSTVGLDKFAIETGFSQTTQSLEPRFVVGKSFGDRVSISASQS
                     VGTSTYTSASGELKLWEDVYLQGTWQSSTANNQGQIGGDLKVRYRYRSLKDLLDGKE"
     gene            1339..>2174
                     /locus_tag="VK429_00320"
     CDS             1339..>2174
                     /locus_tag="VK429_00320"
                     /inference="COORDINATES: protein motif:HMM:NF018899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HLN90281.1"
                     /translation="MARSSRFAPLIFAGWLAFLPVPSAGEEDRPPAGSGPVIASISFQ
                     VPSAYQVTYEECYGLITLRPGDQLTEEKVRESIRRLYTRSVFREVTAYVREDGGKADL
                     LFFLRPTPMVAEVEVSGQKSVTAAQIISASRIRRGGPLEEKDLAEAETSVRSFLAGRG
                     FTTGKCTIQVSCSVVNGAGKVRITVEEGKPGLVETLAIPGASFFSTEQLAGILGVEVG
                     KPFDFQRWEKGLTNIRLEYKKSGFLTVRVEGSVPLCGGGSGLCPRAEVVEGRRYDVRW
                     EGV"
BASE COUNT          403 a          634 c          751 g          386 t
ORIGIN      
        1 tctcctgggg cggggaactg gatgtccgcg tggaggggaa gctgccggcg tcggtagtcc
       61 ggcttgccgt tccctccgtg ttcgaccgcc tcgacggtat cgtgaccctg gaagcccggg
      121 tcaccggaag ccgggacgcc ccctcgatcg tgggaacagg ccacctggaa ggaggcaccc
      181 tgtcgttcat cggctacaac cagctcttcg aggggatccg ggcggatgcg gtcatgagtc
      241 tggagaagat cgtttttgaa catttcgaag ggaagagcgg gggaggctac atcgacggat
      301 ggggagaggt cccgctcaag atggacgcgg ggcagcgcct ttacttctcg gtcgacttcc
      361 tcgacatgag gtatccttac cccgaggatt tccggcctgt cgtccagggc cacgtggaac
      421 tgatcgggcc cgtggatgac ctcttggtga cgggggacgt cgacgtgcag tccgcgcgct
      481 acacccgggt cctgtacccc gagaaagcgc tcgtcgactt cagccggagg ctctcggaca
      541 ccgtggcgcg gcgggagaaa tccgaattcc gggtccggct ggacatcaac gtcgtcgcgg
      601 atcgaacgat ccggatcaag aacaacctgg cggacatcaa agccagcggg gagttcaagg
      661 tcggggggga caccagcaaa gtgatcgtcc tcgggacctt cgatgtctac gaagggtacg
      721 tcgagtttta cggcagccgg tacgaactga agcgggccac cgtggacttc caggacccgc
      781 ggaagataaa cccccgcctg gacgcgcggg gcgagacgaa gaagggaagc tacaatatcg
      841 ccgtcctggt caccgggacc atggagaagc cggaggtgga cttcacgtcc gacccgccgt
      901 tgagccgaac cgacatcgtg agcctcttgg cgttcggcgt cactacccag aaaaccgcga
      961 cttccggcac gggtaccggg cagacttccg gattgggcgg gacggcggca atcgccatcg
     1021 ggagcaccgt gggcgtggac gagaagatcc gcagcacggt gggactggac aagttcgcca
     1081 tcgagaccgg cttttcccag accacccagt ctctggagcc gaggtttgtc gtggggaagt
     1141 cgttcgggga ccgggtgtcc atctccgcct cccaaagcgt cgggacctcc acctacacct
     1201 ccgcttcggg ggagttgaag ctttgggagg acgtttacct gcaagggacc tggcaaagca
     1261 gcaccgccaa taaccagggg caaatcggtg gcgacctgaa ggtccgctac cggtatcgat
     1321 cgctcaagga tctgctggat ggcaaggagt agccggttcg ccccgttgat cttcgcgggg
     1381 tggttggcgt tcctccccgt cccttcggcg ggagaggagg atcgcccgcc cgccggctcc
     1441 ggaccggtca tcgcgtccat ctccttccag gtcccctccg cctaccaggt cacgtacgag
     1501 gagtgttacg ggcttataac cttgcggccc ggggaccaac tcaccgagga gaaggtcagg
     1561 gaatccatcc gccgcctgta cacccggtcg gtttttcgcg aagttactgc gtatgtccgg
     1621 gaggacgggg ggaaggccga cctgctgttc ttcctgcgcc ccacccccat ggtggccgag
     1681 gtcgaggtat cggggcaaaa gtcggttacg gcggcccaga tcatctccgc atcccggatc
     1741 cggcgaggcg ggccgcttga ggaaaaagac ctcgcggagg ccgagacgtc ggtccggtca
     1801 ttcctggcgg ggagagggtt cacaacgggg aaatgcacga tccaggtttc gtgcagcgtc
     1861 gtgaacggag cggggaaggt ccggatcacc gtggaggaag ggaagccggg gttggttgag
     1921 acccttgcca tccccggagc gtcgttcttt tccacggaac agcttgctgg gatccttggc
     1981 gtggaagtcg ggaagccgtt cgatttccag cggtgggaga agggcctcac caacattcgg
     2041 ctggagtaca agaaatcggg gttcctgacc gtccgtgtcg agggatccgt ccccctttgc
     2101 gggggtggga gcggtctttg cccgcgcgcc gaggtggtag aggggcggag atacgacgtc
     2161 cgttgggaag gggt
//
LOCUS       DATGYW010000025         1575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_430202, whole genome shotgun sequence.
ACCESSION   DATGYW010000025 DATGYW010000000
VERSION     DATGYW010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430202"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..303)
                     /locus_tag="VK429_00325"
     CDS             complement(<1..303)
                     /locus_tag="VK429_00325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90282.1"
                     /translation="MNVKEAGFLAIDRGDHQEAVNLFMRSLQKAKDPTGYYGFGLAHF
                     LLEDYATARWAFHKTLELDRGNTEAIRRLSTMEKPEVDTGKTALSPPDHERRFRVGT"
     gene            complement(300..>1575)
                     /locus_tag="VK429_00330"
     CDS             complement(300..>1575)
                     /locus_tag="VK429_00330"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HLN90283.1"
                     /translation="DFITSPETPPVSILVPAYNEERVIVRTVRSTLAVNYPFFEVIVI
                     NDGSTDATLDTLVRTFRLHKVDRAYRNVLKTTPIRGFYFNPDVPNLLVIDKENSGKAD
                     SLNCGINVSRSPYFCTVDADSVLEENALVKLMTPTVESTVPVVACGGVIRVLNGVHLE
                     DGAVRSIDLPRSSIAMFQIVEYLRAFLFGRVGLDAMNGILILSGAFSLFRKASVVEAG
                     GYRVKNVTEDMELITRLHRQAIERKTPYSIKFISDPVCWTEVPENLKMLGRQRRRWHL
                     GLMQSIVQNRSALFNPRYGKFGWVVLPYYLIVELLSPVVEMVGYVAVILSYLFGMLSF
                     DFMLLFLALAIFYGVFLSTASIYLEEVTYRRYPLWSHLLRLLFYGVIENFGYRQINSF
                     WRCQAFLKYLVGMRKWEYVEKGRNRPRGNPGS"
BASE COUNT          314 a          477 c          480 g          304 t
ORIGIN      
        1 tgtcccgacc cggaaacggc gctcgtgatc cggcggggac aacgctgtct tcccggtgtc
       61 gacttccggt ttttccatcg tggaaagacg gcggatcgcc tccgtgttgc cccggtccag
      121 ttccagcgtt ttgtgaaacg cccaccgggc ggtggcgtaa tcctccaaca ggaagtgggc
      181 cagtccgaaa ccgtaatatc cggtcggatc cttggccttc tggaggctcc tcatgaagag
      241 attgacggct tcctggtgat cccccctgtc gatcgccaga aatcccgcct ctttgacgtt
      301 catgacccgg gattacccct cggcctgttt cttccctttt cgacatactc ccacttccgc
      361 atcccgacca ggtacttgag aaacgcctgg cacctccaga acgagttgat ctgccggtac
      421 ccgaagttct cgatcacgcc gtagaacagc aggcggagaa gatggctcca caggggatac
      481 cggcgatagg tgacctcttc caggtagatg ctcgcggtgg acaggaatac gccgtagaag
      541 atcgccaggg caaggaacag gagcatgaaa tcgaagctca gcatcccgaa caggtacgac
      601 aggatcacgg cgacgtagcc gaccatttcc accacgggac tcaacagctc gacgatcagg
      661 tagtacggaa ggacgaccca tccgaacttc ccgtaccggg ggttgaacag ggcggagcgg
      721 ttctggacaa tgctctgcat caggccgaga tgccaccgcc tcctctgcct cccgagcatc
      781 ttgaggttct ccgggacctc ggtccagcac accggatcgg agatgaactt gatcgagtac
      841 ggggttttcc tctcgatggc ctggcggtgg agccgggtga tcagttccat gtcctcggtg
      901 acgttcttca cccggtaccc tcccgcctcc acgacggacg ccttgcggaa cagggaaaac
      961 gccccggaga ggatgaggat cccgttcatc gcgtccaggc cgacgcggcc gaacaggaag
     1021 gccctcaggt actccacgat ctggaacatc gcgatgctgc tcctcggcag atcgatgctc
     1081 cggacggccc cgtcctccag gtgcaccccg ttgaggacac ggatgacgcc gccgcatgcg
     1141 acgaccggca cggtgctttc cacggtgggg gtcatcagct tgacgagtgc gttttcctcg
     1201 agcacggaat cggcgtcgac ggtgcagaag tagggacttc gtgaaacgtt gattccgcag
     1261 ttcaaggaat cggccttccc gctgttctcc ttgtcgatca ccagcaggtt cggcacgtcg
     1321 ggattgaagt agaacccgcg gatcggcgtc gtcttgagga cgttccgata agcgcgatcg
     1381 accttgtgga gacggaacgt ccggacgagt gtgtcaagag tggcgtccgt ggagccgtcg
     1441 ttgatgacga tgacctcgaa aaacggatag ttcacggcga gggtcgaccg gacggtccgg
     1501 acgatgaccc gctcctcgtt gtacgcgggg accaggatgg agaccggcgg ggtctccggc
     1561 gaggtgatga aatcc
//
LOCUS       DATGYW010000026         1741 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_484054, whole genome shotgun sequence.
ACCESSION   DATGYW010000026 DATGYW010000000
VERSION     DATGYW010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1741)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1741)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_484054"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /gene="hemC"
                     /locus_tag="VK429_00335"
     CDS             <1..735
                     /gene="hemC"
                     /locus_tag="VK429_00335"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: protein motif:HMM:TIGR00212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HLN90284.1"
                     /translation="ALLSNRIDLAVHSMKDVPTDLPEGLEISCITRREDPRDAFLSVK
                     FARFEDLPKGARVGTSSLRRQTQLLGLRPDLSIDQLRGNLDSRIRKMEEGNYDAILLA
                     AAGLRRLGWDGKIRQYIPADVSIPAIGQGALGIEIRRDDERTREAVAFLDDRETSLAV
                     RAERGFLKRLEGGCQVPVAAHGTVAGDTVSLAGLIGKPDGSRILRGTRSGSVSAPEAV
                     GVALAGELLSRGGREILDEVYRQSGS"
     gene            740..1528
                     /locus_tag="VK429_00340"
     CDS             740..1528
                     /locus_tag="VK429_00340"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006782 - protoporphyrinogen IX
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HLN90285.1"
                     /translation="MTLSGKRILVTRSAEQAGELAALVRREGGIPVLFPTIRLTPPEN
                     CAPLDREIGRLSSFDWILFASANAARFFCERASRLGVGSWSGTLRVASVGPGTTKELA
                     ARSVPVHRTAEKHTAEGLFEALSPAGIRGKRFLLPRAEEGREILPALIAQEGGEVVSV
                     VAYRNGLAEKDEAVAAEIVSRPPDVCTFASPSAFRNLFLLLGNGTARSMLSRTRIAVI
                     GEVTARVVERRDFRVDIVPETYTLKGMVDAVQAFFAAHRPPRPG"
     gene            1555..>1741
                     /locus_tag="VK429_00345"
     CDS             1555..>1741
                     /locus_tag="VK429_00345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015723680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HLN90286.1"
                     /translation="MQFPEYRPRRLRRNETLRRMVRETKLSVDDLIYPLFAAAGKGIR
                     AEVSSMPGVFQLSVENLA"
BASE COUNT          257 a          593 c          625 g          266 t
ORIGIN      
        1 gcgctgctgt cgaaccggat cgacctcgcc gtccactcga tgaaggacgt ccccaccgac
       61 ctcccggaag ggctcgagat ctcctgcatc acgcggcggg aggacccgcg cgacgccttc
      121 ctgtccgtga agttcgcgcg gttcgaggat cttccgaagg gggcgcgggt ggggaccagt
      181 tccctgcgtc gccagaccca gctgttgggc ctgcggcccg atctttcgat cgatcagctg
      241 cgggggaacc tcgactcgcg catccggaag atggaggagg ggaactacga cgcgatcctc
      301 ctcgccgccg cggggcttcg ccggctcggg tgggacggca agatccgtca atatatcccc
      361 gccgacgttt ccatcccggc gatcgggcag ggggcgctcg ggatcgagat ccggcgcgac
      421 gacgaacgaa cccgcgaggc cgtggcgttc ctggacgacc gggagacgtc cctggcggtg
      481 cgcgcggagc gcggcttcct gaagcggctg gaaggcgggt gccaggtccc cgtcgcggcg
      541 cacggaacgg tggccgggga cacggtctcc ctcgcggggc tgatcgggaa gcccgacggt
      601 tcgcggatcc tgcgcggaac ccggagcgga tccgtctccg ccccggaggc ggtcggagtc
      661 gcgctcgccg gggagctcct gtcgcggggc ggcagggaga tcctcgacga ggtgtaccgg
      721 cagtccggtt cgtgaaggga tgacgctctc ggggaaacgg atcctcgtca cacgaagcgc
      781 ggagcaggcc ggcgaactgg ccgccctggt ccggcgcgag ggcggcattc cggtcctctt
      841 ccccacgatc cggctgaccc ctcccgagaa ttgcgccccc ctcgaccggg agatcgggcg
      901 cctctcctcc ttcgactgga tcctcttcgc gagcgccaac gcggcccggt tcttctgcga
      961 gcgcgcgtcc cggctagggg tcggctcctg gtcggggacc cttcgcgtgg ccagcgtcgg
     1021 accggggacg acgaaggagc tcgcggcgag gtccgtcccg gtccaccgga cggcggaaaa
     1081 gcacaccgcc gagggtctct tcgaggcgct ctcccccgcg gggatccggg ggaagcggtt
     1141 cctcctcccg cgcgccgagg aggggaggga gatccttccc gccttgatcg cacaggaagg
     1201 cggagaggtg gtgagcgtcg tcgcctaccg gaacggcctc gcggagaagg acgaggcggt
     1261 ggccgccgag atcgtgtccc gcccgcccga cgtctgcacc ttcgcgtcgc cctcggcgtt
     1321 ccggaacctc ttccttctcc tcgggaacgg gacggcgcgg agcatgctct cccggacgcg
     1381 catcgcggtg atcggcgagg tgaccgcgcg ggtcgtggaa cgcagggatt tccgggtgga
     1441 catcgtgccc gaaacgtata cgctgaaagg gatggtggac gccgtccagg cgttcttcgc
     1501 cgcccatcga ccgccccgcc cggggtaacg ggcgatcgga ccaggaggaa ttcgatgcaa
     1561 tttccggaat accggccccg ccgcctgcgg cggaacgaaa ccctgcgccg gatggtccgc
     1621 gagacgaaac tttccgtgga cgacctgatt tacccgctct tcgccgccgc cgggaagggg
     1681 atccgcgcgg aagtctcctc gatgccgggc gtcttccagc tttccgtcga gaatctcgcg
     1741 a
//
LOCUS       DATGYW010000027         2065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_323353, whole genome shotgun sequence.
ACCESSION   DATGYW010000027 DATGYW010000000
VERSION     DATGYW010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323353"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VK429_00350"
     CDS             <1..301
                     /locus_tag="VK429_00350"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HLN90287.1"
                     /translation="RGTFPKVQFQAAGFVTTEDLLPDLQREVRRLRAGETSQPFLTEA
                     GAYLLRVVEREGGTPGDFSAVKDALTEELTDRRSEKAYSDLLSELKRSASIDVRL"
     gene            324..1316
                     /gene="pdxA"
                     /locus_tag="VK429_00355"
     CDS             324..1316
                     /gene="pdxA"
                     /locus_tag="VK429_00355"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011339739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HLN90288.1"
                     /translation="MLPKIAITMGDPAGIGPEVTVLAHAREELFSRCRPVVYGDPAIL
                     RRAVQVTGVPLAVVGEDEGHGPGRIVVAARSSLDPAQVPFGRPSLPGSVAMAGYIRSA
                     ARDVLSGVASAIVTCPITKEGLKAAGVPYPGHTEFLAHLCGGADVVMMLAGDRLRVAL
                     VTIHVGLRRALELLSPALIEKTVRITDTFFRRYMGTPSPRIAVAALNPHAGEGGMFGD
                     EETTLIAPAIAACRAAGIDASGPYPPDTIFYRAYRGEFDVVVAMTHDHGLIPLKLVHF
                     DDGVNVTMGLPIIRTSVDHGTAYDIAGKGTANPASLLAAVRMAASMAEKRTEAR"
     gene            1319..>2065
                     /locus_tag="VK429_00360"
     CDS             1319..>2065
                     /locus_tag="VK429_00360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013276429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HLN90289.1"
                     /translation="MALDRIIVRGARAHNLKNIDVEIPRDRLVVITGVSGSGKSSLAF
                     DTIYAEGQRRYVESLSAYARQFLEQMEKPDVDVIEGLSPAISIEQKSVGKNPRSTVGT
                     VTEIYDYLRLLFASIGRVHCPSCGKEIRRQTVTQIVDAVMAMGEGARVQLWAPIVRGR
                     KGEYRKELAKLSRDGFSRVVVDGETRDPAEPIALDKQRKHDIDVVVDRLKVSEASRGR
                     LADSVALCLKLSEGLVRVVDGQGNGAICSEK"
BASE COUNT          317 a          697 c          730 g          321 t
ORIGIN      
        1 tcgcgggacg tttcccaagg tccagttcca ggccgccggc ttcgtgacga ccgaggatct
       61 tctgccggat ctgcaacggg aggttcgacg cctgcgggcc ggggaaacgt cccagccgtt
      121 tctgaccgag gccggggcat acctgttgcg ggtcgtcgag cgcgaggggg ggacgcccgg
      181 ggatttctcc gcggtgaagg acgcgttgac cgaggagctc accgaccgcc gcagcgagaa
      241 ggcgtattcc gatctcctct cggagctgaa gcggtcggcc tcgatcgacg tccgtctctg
      301 acccgtcccg cacccgctcc gccatgctgc cgaagatcgc aatcacgatg ggggaccccg
      361 ccgggatcgg cccggaggtt accgtcctcg cccacgcgcg ggaggagctc ttctcccggt
      421 gccgcccggt ggtgtacggc gacccggcga tcctgcggcg cgcggtacag gtgacgggtg
      481 tgccgctggc agtcgtgggg gaagacgagg ggcacggacc cgggcggatc gtcgtagcgg
      541 cccgctcctc cctcgacccg gcccaggttc cgttcggacg cccctccctc cccggctccg
      601 tggcgatggc agggtacatc cggtccgcgg cgcgggacgt tctctccggg gtggcctcgg
      661 cgatcgtcac ctgcccgatc acgaaggaag ggctgaaggc ggcgggcgtc ccgtaccccg
      721 ggcacacgga gttcctcgcc cacctgtgcg gcggcgccga cgtggtgatg atgctggccg
      781 gcgaccgtct gcgcgtcgcc ctggtcacga tccacgtcgg attgcgccgc gccctggaac
      841 ttctctctcc cgcgctcatc gaaaagaccg tgcgcatcac cgacacattt ttccgaaggt
      901 acatggggac cccctccccg cggatcgccg tggccgcgct gaacccccac gcgggggagg
      961 gggggatgtt cggggacgag gagacgacgc tgatcgcgcc ggcgatcgcc gcctgccggg
     1021 cggccgggat cgacgcctcg ggtccgtacc ctcccgacac gatcttttac cgcgcgtacc
     1081 ggggggagtt cgacgtcgtc gtcgccatga cgcacgacca cggtctcatc cccctgaagc
     1141 ttgtccactt cgacgacggg gtgaacgtga cgatgggcct gccgatcatc cgtacctcgg
     1201 tggaccacgg caccgcctac gacatcgccg ggaaggggac cgcgaacccc gcgagcctgc
     1261 tcgccgccgt ccggatggcc gcgtcgatgg cggaaaagcg caccgaggcg aggtaggcgt
     1321 ggctctcgac cggatcatcg tgcgcggcgc ccgcgcgcac aacctgaaaa acatcgacgt
     1381 cgagatcccc cgcgaccggc tcgtcgtgat caccggggtc tcgggctccg ggaaatcgtc
     1441 gctcgccttc gacacgatct acgccgaggg gcagcggcgg tacgtggagt cgctctccgc
     1501 ctacgcccgc cagttcctcg agcagatgga gaagcccgac gtcgacgtga tcgagggtct
     1561 ctcccccgcc atctcgatcg agcagaagtc ggtcgggaag aatccccgct ccaccgtcgg
     1621 gacggtcacg gagatctacg actacctgcg gctgctgttc gcctccatcg gccgggtcca
     1681 ctgcccctcc tgcgggaagg agatccgccg gcagacggtg acgcagatcg tcgacgccgt
     1741 gatggcgatg ggggagggtg cgcgggtcca gctctgggcg ccgatcgtcc ggggacgcaa
     1801 gggggaatat cgaaaggagc tcgcgaagct gtcccgcgac ggtttttccc gcgtggtggt
     1861 ggacggggag acgagggatc ccgcggagcc gatcgcgctc gacaagcaac ggaagcacga
     1921 catcgacgtc gtcgtggacc ggttgaaagt ctcggaagcg tcgcgcggcc ggctggccga
     1981 ctccgtagcg ttgtgtctca agctgtccga gggactggtc cgggtggtgg acgggcaggg
     2041 gaacggcgcg atctgcagcg agaag
//
LOCUS       DATGYW010000028         1624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_430587, whole genome shotgun sequence.
ACCESSION   DATGYW010000028 DATGYW010000000
VERSION     DATGYW010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430587"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..971)
                     /locus_tag="VK429_00365"
     CDS             complement(126..971)
                     /locus_tag="VK429_00365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015722020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN90290.1"
                     /translation="MARKIGLSVLALAMVGVLCGAALAGDTLAEVKKKGVLVAGVKDS
                     LPPFGSMDPNTKKYGGYDIDFVNYIAKKLGVKVEYNPVSSANRIPMLMESRIDILAAT
                     MTKTPERAKQIDFSYTYFLTGQKFLTKKGTVKTLKDLEGKRIATAKGSTSEQNVKIAI
                     PSAIVLSLDDYPQGILALQQGKVVAVTTDESILAGQLGVLEKKSATRGKYEIPDLQIS
                     MEPYGIGMRKGDTNFVKFVNDTLLEMEKNGEAKKIFLRWFGPNSESPINRGSFMITAD
                     RMGLE"
     gene            complement(1263..>1624)
                     /locus_tag="VK429_00370"
     CDS             complement(1263..>1624)
                     /locus_tag="VK429_00370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015719406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HLN90291.1"
                     /translation="MSEIVRAGITGIPKGQMEAAISTGLSHGQAMFYIVLPQALRNMI
                     PSFVNQFVSMIKDTSLAFIVGVSELTQIATQINNRTMLYPTEIFIFIAVIYFIICFAF
                     TELSRWLERRLAYRKAI"
BASE COUNT          297 a          496 c          469 g          362 t
ORIGIN      
        1 gtcgaccgcg gcgcggaatg cgccgagcag ccgatccttc tcccgcgggc tcacgggagg
       61 tccgtcagat cgctttgcgc caggccaacc ggcgccccag ccagggacgc tttctgcacc
      121 gccgtctact ccagccccat cctgtcggcc gtgatcatga aactgccgcg gttgatcggg
      181 ctttccgaat tcgggccgaa ccagcgcagg aagatcttct tcgcctcgcc gttcttctcc
      241 atctcgagga gcgtgtcgtt gacgaacttc acgaagttcg tgtccccctt ccgcatcccg
      301 atgccgtagg gctccatgga gatctgaagg tccgggatct cgtacttccc cctggtggcg
      361 gatttcttct caagcacgcc gagctgcccc gccaggatcg actcgtccgt ggtcacggcg
      421 acgaccttcc cctgctgcag ggcgaggatc ccctgcggat agtcgtcgag ggagaggacg
      481 atggcggagg gaatcgcgat cttcacgttc tgctccgagg tggagccctt tgccgtcgcg
      541 atcctcttcc cctcgaggtc cttaagggtc ttgaccgtcc ccttcttcgt caggaacttc
      601 tggccggtca ggaagtaggt gtagctgaag tcgatctgct tggcccgctc gggggtcttc
      661 gtcatcgtcg ccgcgaggat gtcgatgcgg ctctccatca gcatcggtat gcggttcgcg
      721 gaggagacgg ggttgtactc cacctttacg cccagcttct tggcgatgta attgacgaaa
      781 tcgatgtcgt acccgccgta cttcttggtg ttcgggtcca tggagccgaa cggcggcagg
      841 gagtccttca cgccggccac cagcacgccc ttcttcttca cctccgccag cgtgtcaccc
      901 gcgagcgccg cgccgcacag gacgccgacc atggcgagtg ccagaacgga cagcccgatt
      961 ttccttgcca ttttttctcc tccttcacgc gtcaattttt tcccatggct ttcccttttt
     1021 ctgcaaaggt ttctttttac ctccccggaa agatccgttc gaacaatctc cgtagaactt
     1081 atcggcatga atttcaagaa agttcatttt cgacatcttg catgggatgg gatcccctcc
     1141 aagatcctat taatgaaagg tatatatcct ggcaggtgaa aacgaatcga cttgcacatg
     1201 acatccggat ggatggtgga tcggtgcatg ggcgaatgga tgtcaagggg aaccgcgagg
     1261 cgtcagatcg ctttgcgata ggccaaccgg cgctccagcc agcgggacag ctccgtgaag
     1321 gcgaagcata tgatgaagta gatgaccgcg atgaagatga agatctcggt gggatacagc
     1381 atcgtccggt tgttgatctg ggtggcgatc tgggtgagct ccgacacccc cacgatgaac
     1441 gccagcgagg tgtccttgat catcgacacg aactggttga cgaaggacgg gatcatgttc
     1501 cgcaacgcct gcgggaggac gatgtagaac atcgcctgtc cgtgggacag cccggtcgag
     1561 atcgccgcct ccatctgccc cttcgggatc ccggtaatcc ccgcgcgcac gatctcggac
     1621 atgt
//
LOCUS       DATGYW010000029         2377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_215807, whole genome shotgun sequence.
ACCESSION   DATGYW010000029 DATGYW010000000
VERSION     DATGYW010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_215807"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..1674
                     /gene="ilvD"
                     /locus_tag="VK429_00375"
     CDS             22..1674
                     /gene="ilvD"
                     /locus_tag="VK429_00375"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007220521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HLN90292.1"
                     /translation="MRSDRTKKGLERMPHRALYCAAGVPQAAMGKPFIGLATSYTDLV
                     PGHVGMRALERAVENGVHAGGGYPFLFGVPAVCDGIAMGHRGMHFSLPLREIVADLVE
                     SVAEAHALDGLVLLTNCDKITPGMLMAAARLDIPCIVLTAGPMHSGRIGNRRLSLVSD
                     TFEAVGRFQRGEIGAAELSRLEAEACPGEGSCQGLYTANTMACLTETMGMSLPGCATA
                     LAGMSKKRHMAYASGQRVVELVRRNVTARKILTKAAFANAIRVDLALGGSSNSVLHLL
                     AIAREAGVDLPLSEFDRLSRETPQLTTVTPGGPHMMEDVEYSGGVPAILNRLLPFLKK
                     NPTVCGEEITAIARRGRVLDDTIIRTLKAPVRKEGGLAILTGNLAPGGAVVKQSGVDP
                     SMFVFRGKARVFDSEEAAMAAIMGGRIRPGSVVVIRYEGPRGGPGMREMLSPTAAIMG
                     MGLGTKVALITDGRFSGGTHGPCIGHISPEAMEGGPIALVREGDPIVLDIPKRKLSLD
                     VPAAELARRRRGWKSPAPKVAKGYLSRYAKLVRSAGEGAVVV"
     gene            1688..>2377
                     /locus_tag="VK429_00380"
     CDS             1688..>2377
                     /locus_tag="VK429_00380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006918315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HLN90293.1"
                     /translation="MQMTGAEIFFKALADLEVDVVFGYPGGATIHIYDALFKNVKVRH
                     MLCRHEQGAVHMADGYARASGRTGVCLVTSGPGATNTVTGLATAYMDSTPIVVFSGQV
                     PTLLIGNDAFQEADIVGISRPCTKHNYLVKETKDLARIIKEAFYIASTGRPGPVLVDM
                     PKDVLTASARYDLPKEVSLRGYHPTYEGHPRQVESAVRLLLSRERPVVYAGGGVILSN
                     ASGELAELSHAL"
BASE COUNT          380 a          786 c          844 g          367 t
ORIGIN      
        1 ccctgggacg aaaggatgac gatgcgaagc gaccgaacga aaaaaggact ggaacggatg
       61 ccgcaccggg cgctctactg cgccgccggc gttccccagg ccgcgatggg gaagccgttc
      121 atcggtctcg ccacctccta cacggacctc gtcccgggcc acgtcgggat gcgggccctc
      181 gagcgcgcgg tcgaaaacgg cgttcacgcg gggggtgggt atcccttcct cttcggcgtc
      241 ccggccgtgt gcgacgggat cgccatgggg caccgcggga tgcacttctc ccttccgctg
      301 cgggagatcg tggcggacct ggtcgagtcg gtggccgagg cgcacgcgct cgacggcctg
      361 gtccttctca ccaactgcga caagatcacg cccggcatgc tgatggcggc ggcgcggctc
      421 gacatcccgt gcatcgtcct gacggcgggc ccgatgcact cgggccggat cgggaaccgg
      481 cgcctttcgc tggtttccga caccttcgag gcggtgggcc gcttccagcg gggcgagatc
      541 ggcgcggcgg agctttcccg cctcgaggcg gaggcgtgcc ccggcgaagg gtcgtgccag
      601 ggactctaca ccgcgaatac gatggcgtgc ctgaccgaga cgatggggat gtccctcccc
      661 ggttgcgcca cggccctcgc gggaatgtcg aagaagcggc acatggccta cgcgagcggg
      721 cagcgggtgg tcgaactcgt gcgaaggaac gtgacggcgc ggaagatcct gacgaaggcg
      781 gccttcgcca acgcgatccg tgtcgacctt gcgctgggcg gttcctccaa ctcggtcctt
      841 cacctgctgg cgatcgcccg cgaggcggga gtcgacctgc ctctatcgga gttcgaccgg
      901 ctttcccgcg aaaccccgca gctcacgacg gtgacgcccg gcgggccgca catgatggaa
      961 gacgtggagt actcgggcgg ggtcccggcg atcctcaacc gcctcctccc gttcctcaag
     1021 aagaatccga ccgtctgcgg cgaggagatc acggcgatcg cccggcgcgg gcgcgtgctg
     1081 gacgacacca tcatccggac gctcaaggcc cccgtccgga aagagggggg gctggcgatc
     1141 ctcacgggaa acctcgcccc ggggggcgcg gtggtcaagc aatccggggt cgacccgtcg
     1201 atgttcgtct tccgggggaa ggcgcgcgtg ttcgactccg aggaagcggc gatggcggcg
     1261 atcatggggg gcaggatccg gccgggatcg gtcgtggtca tccgctacga aggtccccgc
     1321 ggcggccccg gaatgcggga aatgctctcc cccacggcgg cgatcatggg gatggggctg
     1381 gggacgaagg tcgcgctgat caccgacggg cggttctcgg gcggcacgca cggtccctgt
     1441 atcgggcaca tctccccgga ggcgatggaa gggggaccga tcgcgctggt gcgcgaaggc
     1501 gatccgatcg tcctggacat cccgaagcgg aaactttccc tggacgtccc cgcggcggaa
     1561 ctcgcgcggc ggcggagggg gtggaaatcc cccgccccga aggtggcgaa gggatacctc
     1621 tcccggtacg cgaagctcgt ccgttcggcc ggcgagggcg cggtggtcgt atgaggaggt
     1681 tccttccatg cagatgaccg gtgcggagat cttcttcaag gcgctcgcgg acctggaggt
     1741 cgacgtcgtc ttcggctacc ccggcggggc gaccatccac atctacgacg ccctgttcaa
     1801 gaacgtgaag gtacgccaca tgctgtgccg ccacgagcag ggggcggtcc acatggccga
     1861 cggctacgcc cgggcgtccg gcaggacggg agtgtgcctc gtcacctcgg gtcccggggc
     1921 gacgaacacg gtcacagggc tcgccacggc gtacatggat tcgaccccga tcgtcgtctt
     1981 ctcggggcag gtccccacgc tcctgatcgg caacgacgcc ttccaggagg cggacatcgt
     2041 cggaatcagc cggccgtgca ccaagcacaa ctacctcgtc aaggagacga aggacctcgc
     2101 ccggatcatc aaggaggcgt tttacatcgc ctccacgggc cgtcccggtc cggtgctggt
     2161 cgacatgccc aaggacgtgt tgaccgcctc cgcgcgatac gatctcccga aggaggtgag
     2221 tctccgggga tatcacccta cctatgaggg gcacccgcgc caggtggaaa gcgcggtgcg
     2281 gctgctgctg tcccgggagc gcccggtcgt ctacgccggg ggcggcgtca tcctttcgaa
     2341 cgcctccggg gagctggcgg agctttccca tgcgctc
//
LOCUS       DATGYW010000030         1641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_323704, whole genome shotgun sequence.
ACCESSION   DATGYW010000030 DATGYW010000000
VERSION     DATGYW010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_323704"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..817)
                     /locus_tag="VK429_00385"
     CDS             complement(<1..817)
                     /locus_tag="VK429_00385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011339834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HLN90294.1"
                     /translation="MEEESPFSGKCEVSAAGRSDVDLLDAYSRAVTTVVEAVGPAVVS
                     ISVGRESADGNGLEPMGAGSGILLTPDGYVLTNHHVVREANRVRLTLTDGARLGAVPV
                     GTDPPNDLAVVRADGSGLPYAALGDSAALKVGQLVIAIGNPFGFQSSVSTGVVSATGR
                     GMRSIDRRLIENVIQHTAPLNPGNSGGPLVDSRGRVVGINTAIIAAAQGLGFAVPSNT
                     ARHVVSQILAHGRVRRGYLGIGGRQRPLSRRMVRYFGLPRESGVEVVSLDPNGP"
     gene            complement(867..1502)
                     /locus_tag="VK429_00390"
     CDS             complement(867..1502)
                     /locus_tag="VK429_00390"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HLN90295.1"
                     /translation="MLVGKRMTRNPKTVSPDDPLSFAAGILRENRFHHLPVVQGGRLV
                     GILSDTDLRNASFTAIPAEGEGGPAGDRPVREAMRTEVWSVTPDDSVEDALLILAREK
                     FGALPVLSGDRLVGIITRADLLNAFVDLLDVNEVCFCVDVTFPRNMARFEELIDVFTT
                     MGVEVRSVLIAPQGEIGALNAHLRVATIDGPAVRRALREKGFVISEQVSRL"
BASE COUNT          272 a          608 c          509 g          252 t
ORIGIN      
        1 ccggcccgtt cgggtcgagc gaaaccacct cgacccccga ctcccgcggc agtccgaaat
       61 accgcaccat ccgccgcgac aggggccgct gccgtccgcc gatcccgagg tacccccttc
      121 gcaccctccc gtgcgcgaga atctgcgaca ccacgtggcg cgccgtgttc gacggcaccg
      181 cgaagccgag cccctgcgcc gccgcgatga tcgccgtgtt gatcccgacg acccggcctc
      241 tcgaatcgac cagcggcccc ccggagttgc cggggttcaa gggggcggta tgctggatca
      301 cgttctcgat cagcctccgg tcgatgctgc gcatcccgcg acccgtagcg ctcaccacgc
      361 cggtggagac gctcgactgg aacccgaacg gattgccgat ggcgatcacc agctgcccca
      421 ccttcagggc cgcggagtcg cccagcgcgg cgtacggaag cccggaaccg tccgcgcgga
      481 ccaccgcgag gtcgttcggc ggatccgtac cgaccgggac cgcgccgagg cgcgcaccgt
      541 ccgtcagcgt caaccgcacg cggttcgctt ccctgaccac gtggtgattg gtaaggacgt
      601 agccgtcggg cgtcagcagg atcccggagc cggcccccat cggctccaga ccgttcccgt
      661 ccgccgattc acggcccacc gaaatgctga ccaccgcggg ccccaccgcc tccaccaccg
      721 tggtgacggc gcgggagtac gcgtccagca gatcgacgtc cgacctgcct gcggcgctca
      781 cctcgcactt gccggaaaac ggggattcct cttccatcga acttccccct ccctttcctt
      841 ttcgatgccg gaaaggggga cggagttcag aggcgggaga cttgctccga gatcacgaac
      901 cctttttcgc ggagagccct gcggaccgcc ggaccgtcga tcgtcgcgac ccgcaggtgc
      961 gcgttcaacg ccccgatctc gccctgcggc gcgatcagga cgctgcggac ctcgacgccc
     1021 atcgtggtga agacgtcgat cagctcctcg aaccgggcca tgttccgggg gaaggtgacg
     1081 tccacgcaga agcatacctc gttcacgtcg aggaggtcga cgaaggcgtt cagcaggtcc
     1141 gctctcgtga tgatccccac gaggcggtcc ccggagagca ccgggagggc gccgaacttt
     1201 tcccgggcga ggatgaggag cgcgtcctcg accgaatcgt cgggggtgac ggaccagacc
     1261 tccgtccgca tcgcctcccg gaccggccgg tcccccgccg gccccccttc cccttccgcg
     1321 gggatcgcgg tgaacgaggc gttccgcagg tccgtgtcgg acaggatccc gaccagtctc
     1381 ccgccctgga ccaccggaag atggtggaac cggttttccc gaaggatccc cgcggcgaac
     1441 gagagcgggt catccggaga caccgtcttg ggattccgcg tcatccgttt tccgacgagc
     1501 atcgggagcc ctcctgtccg tgtccaatgt aacgcatccc ccgggagatg tacaagatgc
     1561 cccctcaacg gaacatgggc ggttagggag tgccccactc ccgaacaaat tacgctccct
     1621 ggggtacccc cgatatccgg t
//
LOCUS       DATGYW010000031         2025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_109912, whole genome shotgun sequence.
ACCESSION   DATGYW010000031 DATGYW010000000
VERSION     DATGYW010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109912"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1274)
                     /locus_tag="VK429_00395"
     CDS             complement(<1..1274)
                     /locus_tag="VK429_00395"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HLN90296.1"
                     /translation="MPSGLDGLFAKFLALGYVSPDDLKEMRERSAALGIPLAEAALLA
                     DRLHPDARGWMLAESLGIPFLEVEPDSISLDLAKLFPEALARENRIVPIAREEDRVTV
                     AVTDPFRHGVFAVLEEMTGFSLRIVVCPARTIGGILARFYPDPYGLEPLDIGEGSISR
                     VEAEKWLSEGGKRRVCGQLLLHAASRGMSGVRMFPVGRDVVVEGRSDSKVVRLLAFPL
                     LFRKPLFDAFLELAGVPAGSDLPPETIFHLESGNGVVALQGSFLQGLSGPEVIIKILP
                     DLRAGLSLDAVGFNPGQLDIIEKVLRKRNGLFIVSSPGPEGVATTLFAMLREGYRPGL
                     RTITVEERHRFRNEGYIQLDRRQAEERFSSDWSRLAESLEPDILMIEHLPDPAALIDL
                     LHLAQAGAFVLCGIRRFNFDRALRTLLTLDVDP"
     gene            1378..1650
                     /locus_tag="VK429_00400"
     CDS             1378..1650
                     /locus_tag="VK429_00400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90297.1"
                     /translation="MLPRVMITFAAMAALLSCAGCIVTTSTYDAKVREADALRDAYAS
                     SNRETSRLAGEVKALEKKVAGQEAAIEELSSRADACDSVAGRSAAE"
     gene            1795..>2025
                     /locus_tag="VK429_00405"
     CDS             1795..>2025
                     /locus_tag="VK429_00405"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HLN90298.1"
                     /translation="MDVFETMKVRQSIRKFRKEPIPREHILQMAEAASWAPTAGNSQN
                     FRFIAVQERETIARMRGIVDEIESRVTGSEIAG"
BASE COUNT          403 a          641 c          675 g          306 t
ORIGIN      
        1 gggtccacat cgagggtcag caacgtgcga agcgcccggt cgaagttgaa cctccggatg
       61 ccgcacagca cgaatgcccc ggcctgcgcg aggtgcagca ggtcgatgag ggccgccgga
      121 tcgggcaggt gctcgatcat caggatgtcc ggctcgaggg actccgccag ccgcgaccag
      181 tcggaggaaa accgctcctc cgcctgccgc cggtcgagct ggatataccc ctcgttccgg
      241 aaccggtggc gctcctcgac ggtgatggtg cggagaccgg gacggtaccc ctcgcggagc
      301 atggcgaaga gggtggtggc gaccccctcg ggcccggggg aagaaacgat gaaaagccca
      361 ttccgcttcc gcaggacctt ttcgatgatg tcgagctggc cggggttgaa accgacggca
      421 tcgagggaga gccccgcccg caggtcaggg agaatcttta tgatcacctc ggggccggag
      481 agaccctgca ggaaactccc ctggagggcg acgaccccgt tccctgattc gagatggaag
      541 atcgtctcgg gaggaagatc cgacccggcg gggacgcccg ccagctccag gaacgcgtcg
      601 aagagcggtt tccggaacag gagggggaag gcgagaaggc gcacgacctt cgaatccgat
      661 cggccttcga ccaccacgtc cctgccgacg gggaacatcc gaacgcccga catcccgcgg
      721 gacgccgcgt ggagcaggag ttgcccgcaa acccgccttt tccccccttc cgagagccac
      781 ttctccgcct ccacccggga tatcgagccc tccccgatgt ccaacggctc gaggccgtac
      841 gggtcggggt agaagcgggc gaggatcccc ccgatcgtcc gcgcggggca caccacgatg
      901 cgcagggaga acccggtcat ctcctcgagg accgcgaaca ccccgtggcg aaacgggtcg
      961 gtcacggcca ccgtcacccg gtcctcttcc cgggcgattg gaacgatccg gttctcgcga
     1021 gcgagcgctt cgggaaacag tttggcgaga tcgagggaaa tggagtcggg ctcgacctcg
     1081 agaaacggaa tcccgagcga ctccgcgagc atccatccgc gcgcatcggg gtggagccgg
     1141 tccgcaagga gggcggcctc tgccagtggg atcccgagag ccgcggaacg ctcccgcatc
     1201 tccttcaggt cgtcggggga aacgtagccg agcgcaagga acttcgcgaa gagaccgtca
     1261 aggccggatg gcacggggtg cagccctccc gtgtttattt tcaactttat taaaaaggtg
     1321 ccggaaagta aaatcattat tgccctttgc cgttaccctc tatttcggag accgcccttg
     1381 cttcctcgcg tgatgatcac gtttgccgca atggccgcgc ttctttcctg cgccggttgc
     1441 atcgtaacaa cgtcgaccta cgacgcgaag gtgcgggagg ccgacgccct tcgtgacgcg
     1501 tacgcctcgt cgaaccggga aacatcgagg ctggccggcg aggtcaaggc cctggagaag
     1561 aaggtcgccg ggcaggaagc cgccatcgag gagctttcct cccgggcgga cgcatgcgat
     1621 agtgtcgccg ggcgatcggc ggcggagtag gacataccgc caccccactc ccgtacggag
     1681 tgcgctccct ggggtacccc accgtaggaa aaacgggggc accccactcc cgtacggagt
     1741 gcgatccctg gggtactcgg gcttggaacg acttgaccga gcaggaggat tcgaatggac
     1801 gtcttcgaaa cgatgaaggt ccgacagagc atccggaaat tccggaagga accgatcccg
     1861 agggaacaca tcctgcagat ggcggaggcc gcgtcgtggg cgcccacggc gggaaattcg
     1921 cagaacttcc gattcatcgc ggtccaggaa cgggagacga tcgcccggat gcggggaatc
     1981 gtcgacgaga tcgaatcgcg cgtcaccggg agcgaaatcg ccggg
//
LOCUS       DATGYW010000032         1999 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_269470, whole genome shotgun sequence.
ACCESSION   DATGYW010000032 DATGYW010000000
VERSION     DATGYW010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1999
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269470"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /locus_tag="VK429_00410"
     CDS             complement(<1..515)
                     /locus_tag="VK429_00410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HLN90299.1"
                     /translation="MTKFAWEGKNRGGGPVSGEMEAPSEAFVLAQLRREQIAPLKIRK
                     KGADLAIRLPWKGEKKVGGKEMAIFTRQFATMIDAGLPLVQCLDILGQQQENPTFKKV
                     ILKIKEDVESGSTFADALSKHPKVFDSLFVNLVAAGEVGGMLDTILSRLADYIEKSMK
                     LAKKIKGAMVYP"
     gene            complement(547..1644)
                     /locus_tag="VK429_00415"
     CDS             complement(547..1644)
                     /locus_tag="VK429_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HLN90300.1"
                     /translation="MVTMQELLSVMYEKGASDLHVTTGIAPTIRVDGRLMPLPHEPLM
                     PQDTRRLCYSILTEVQKQRFEEEWELDLSFGVKGLSRFRANVYMQRGAVAGAFRTIPF
                     RVRPFEELGLPPHLKELCKKPRGLILVTGPTGSGKSTTLAAMLDKINNERQEHIITIE
                     DPIEYLHPHKKCLVNQREVNADTQGFKKALKYILRQDPDIVLIGEMRDLETIEAALTV
                     AETGHLVFATLHTNSCVQTINRILDVFPPYQQPQVRAQLSFVLEGVISQILIPKASGN
                     GRALALEIMIPNPAIRNLIREEKVHQIYSQMQVGQAKFGMQTMNQSLLATYLRREITL
                     DDAVGRSSDPDEFRNLLTAAQSHPQGAGRRA"
     gene            complement(1670..>1999)
                     /locus_tag="VK429_00420"
     CDS             complement(1670..>1999)
                     /locus_tag="VK429_00420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006976962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspE"
                     /protein_id="HLN90301.1"
                     /translation="MKCREEIRIPPKALADAGMKPERIRLARPAKGKGCDECSGTGFR
                     GRVALYEVMPIKEEIKDLVLRGGSALDLQREAVRLGMKTLRQSGLTKLEEGVTTLEEV
                     LRVTAPD"
BASE COUNT          303 a          664 c          620 g          412 t
ORIGIN      
        1 ggatagacca tcgccccctt gatcttcttg gcgagcttca tcgacttctc gatgtaatcc
       61 gcgaggcgcg acaggatcgt gtcgagcatc ccgcccacct ctcccgcggc gacgaggttg
      121 acgaaaaggg aatcgaagac cttcgggtgc ttggaaaggg cgtcggcgaa ggtggagccg
      181 ctctccacgt cctccttgat cttcaggatc accttcttga acgtcgggtt ctcctgctgc
      241 tgcccgagga tgtcgaggca ctggacaagg gggagacccg cgtcgatcat ggtggcgaac
      301 tggcgcgtga agatcgccat ctccttcccg ccgaccttct tctccccctt ccatgggagc
      361 cggatcgcca ggtccgcccc tttcttccgg atcttcaggg gagcgatctg ctcccgccgc
      421 aactgcgcga ggacgaacgc ctcgcttggg gcttccatct cacccgagac gggcccaccc
      481 ccgcggtttt tcccttccca ggcgaatttc gtcatcgtct cctccgttca tccttccgga
      541 acgggatcag gccctgcggc ccgctccctg ggggtggctc tgcgccgccg tcagcagatt
      601 gcggaattcg tcggggtcgg aactgcgccc gaccgcgtcg tccagcgtta tctccctgcg
      661 caggtacgtc gccagcagcg actggttcat cgtctgcatc ccgaacttcg cctgtcccac
      721 ctgcatctgg gagtagatct ggtgcacctt ctcctcccgg atcaggttcc ggatcgccgg
      781 gttcgggatc atgatctcaa gagcgagggc gcgcccgttc ccgctcgcct tggggatgag
      841 gatctgcgat atgaccccct cgaggacgaa ggagagctgc gcgcggacct gcggctgctg
      901 gtagggaggg aacacgtcga ggatccggtt gatcgtctgg acgcacgagt tcgtgtggag
      961 ggtggcgaac acgaggtggc cggtctccgc cacggtgagc gccgcctcga tcgtttccag
     1021 gtcccgcatc tcgccgatga ggacgatgtc ggggtcctgc cggaggatgt acttgagcgc
     1081 cttcttgaac ccctgcgtat cggcgttgac ttcccgttgg ttcacgaggc acttcttgtg
     1141 cgggtggaga tactcgatcg ggtcctcgat cgtgatgatg tgctcctgcc gctcgttgtt
     1201 gatcttgtcg agcatcgccg cgagggtggt cgactttccg gatccggtcg gcccggtcac
     1261 caggatcagc ccccggggct tcttgcaaag ctccttcagg tgcggcggga gtcccagctc
     1321 ctcgaaggga cggacccgga acgggatggt gcggaaggcg ccggcgacgg ccccgcgctg
     1381 catgtagacg ttcgcccgga agcgggagag acccttgacc ccgaaggaga ggtcgagttc
     1441 ccactcctcc tcgaaccgct gcttctggac ctcggtcagg atgctgtagc aaagccgcct
     1501 ggtgtcctgc ggcatgagag gctcgtgcgg cagcggcatg agacggccgt cgacgcggat
     1561 cgtcggcgcg atcccggtcg tgacgtggag atcggacgcc cccttctcgt acatcacgct
     1621 gagaagttcc tgcatcgtca ccatgttgga aactccttgt cggacagtat caatccggcg
     1681 cggttacccg cagcacttct tcgagcgtcg tgaccccctc ctccagcttc gtgagacccg
     1741 actggcggag cgtcttcatc ccgagtcgga ccgcttcgcg ctgcagatcg agcgccgagc
     1801 cgccccgcag gacgagatcc ttgatctcct ccttgatcgg catcacctcg taaagggcga
     1861 cacgcccgcg gaaccctgtc ccgctgcact cgtcgcaccc cttccccttc gccggcctgg
     1921 cgagccggat ccgctcgggt ttcatccctg cgtccgcgag cgccttcggg gggatccgga
     1981 tttcctccct gcatttcat
//
LOCUS       DATGYW010000033         1670 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_56849, whole genome shotgun sequence.
ACCESSION   DATGYW010000033 DATGYW010000000
VERSION     DATGYW010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56849"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VK429_00425"
     CDS             complement(<1..186)
                     /locus_tag="VK429_00425"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HLN90302.1"
                     /translation="MKRRESGFSLLELIIALAIVSVVLAAASTFFISVLKQYKVQTKI
                     TESNVEGIVGLELLRQDL"
     gene            complement(183..551)
                     /locus_tag="VK429_00430"
     CDS             complement(183..551)
                     /locus_tag="VK429_00430"
                     /inference="COORDINATES: protein motif:HMM:NF019575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HLN90303.1"
                     /translation="MTLVEILVSLVIVFIVFLGLSSSGLVVLNENIKNELRDEAVSVA
                     DSAVQDARRALFDNLVTMPADNVLRQVRSVNRPFTVTRTVTNLDGDNRQVTINVGWAR
                     TEGSQTRSYSHQVVTVVRRP"
     gene            complement(562..1017)
                     /locus_tag="VK429_00435"
     CDS             complement(562..1017)
                     /locus_tag="VK429_00435"
                     /inference="COORDINATES: protein motif:HMM:NF023444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family protein"
                     /protein_id="HLN90304.1"
                     /translation="MIVIAIVGIVVMIAVGNFRGLMEKYRVEGETKQMFADLMDARGR
                     AMQRNRVFHVQITNNGYKTFEDTDPAPDGDTNLTGSDTQVVSENVRHTISPTGGLSDF
                     RFNRNGIASVTGSIRFSSTTQPDYDCITVNATRIKMGQNNATDNACVEK"
     gene            complement(1080..>1670)
                     /locus_tag="VK429_00440"
     CDS             complement(1080..>1670)
                     /locus_tag="VK429_00440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90305.1"
                     /translation="TQRKLFGVKDPCFSNQNITSGCTTRVDPNTLTSIDDATAIAEGT
                     ANGTGFPGWSIDLDTTVSVNYDGTGAKNYQAERVVTDPLATSSGNVFFTTFRPYGDDC
                     AIGGRTFLWAVRYNTGGVPAYALQGKALMQVSTASVEQLDLSEAFTRSVSGAVSSLHR
                     GGRRSFALEGVPPTAQGLSLLSPPPPVKRILHMKER"
BASE COUNT          317 a          534 c          471 g          348 t
ORIGIN      
        1 gagatcctgc cgcagaagtt ccaacccgac gatcccttcc acgttgctct cggtgatctt
       61 ggtctgcacc ttgtactgtt tgagaacact gatgaagaag gtggaagccg cagccagcac
      121 gaccgaaacg atcgccaggg cgattatcaa ctccaggagg gagaaacccg attcccgccg
      181 cttcatggcc gcctcacgac ggttacgacc tggtggctgt acgaccgcgt ctggctgccc
      241 tcggtccggg cccatcccac gttgatcgtc acctgccggt tgtccccatc gaggttcgtg
      301 accgtccgcg tgacggtgaa gggcctgttt acgctgcgga cctgccggag gacattgtcg
      361 gccggcatgg tgaccaggtt gtcgaacaac gcgcgacgcg catcctgcac cgcgctgtcc
      421 gccacgctca ctgcctcgtc ccgcaattcg ttttttatat tctcgttcag aacaaccaac
      481 cccgacgaac tcaggccgag aaagacgata aagacgataa cgagggagac gagaatctcg
      541 acgagcgtca tccccgatgc gttatttttc gacacaggca ttgtccgtcg cattgttttg
      601 tcccattttg atccgcgtcg cattcaccgt gatgcaatcg tagtcgggct gcgttgtcga
      661 agaaaaccgg atggatcccg tcaccgaggc gatcccgttc cgattaaagc ggaaatccga
      721 aagcccgccg gtgggggaaa tcgtgtgtct gacgttctcg ctgacaacct gcgtgtcact
      781 cccggtcaaa ttggtgtccc cgtctggagc ggggtcggtg tcctcaaacg tcttgtatcc
      841 attattggtg atctgtacgt ggaacacacg gttccgctgc atcgccctgc cgcgcgcgtc
      901 catcagatcg gcgaacatct gcttcgtctc tccctccacc cggtacttct ccatcagtcc
      961 ccgaaagttg ccgactgcaa tcatcacgac gatcccgacg atggcgatca cgatcatgat
     1021 ctccagcagc gtgaatccgc cgcacgcttc cctgccgtcc cggtaccgca tcgcctctct
     1081 taacgctcct tcatgtgcag gatccgcttg accggcggcg gcggggacag taacgacaac
     1141 ccctgtgccg taggcggaac tccctccagg gcaaaacttc tgcggcctcc gcggtgcagg
     1201 gaggaaaccg caccggaaac ggatcgggtg aatgcctctg acaggtccaa ctgctccacg
     1261 ctggccgtgg acacctgcat gagggctttc ccctgcaggg cgtacgctgg cacccccccc
     1321 gtattgtaac ggacggccca caggaatgtg cggccgccga tcgcgcaatc atcaccgtag
     1381 ggtcggaacg tcgtgaagaa cacgttgccc gaagaggtgg ccagtgggtc ggtgaccacc
     1441 ctctccgcct gatagttctt ggcccccgtc ccgtcgtaat ttacggaaac ggtcgtgtcc
     1501 aggtcgatgg accagcccgg gaatcccgtc ccattggcgg tcccctcggc aatggcggtg
     1561 gcgtcgtcga tgcttgtcag ggtgttcgga tcgacgcgcg tcgtgcaacc ggaagtgatg
     1621 ttctggttcg aaaagcacgg gtccttcacc ccgaacagct tccgttgcgt
//
LOCUS       DATGYW010000034         2236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_485371, whole genome shotgun sequence.
ACCESSION   DATGYW010000034 DATGYW010000000
VERSION     DATGYW010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_485371"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..863
                     /locus_tag="VK429_00445"
     CDS             135..863
                     /locus_tag="VK429_00445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009965885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLN90306.1"
                     /translation="MATVTEIAPDVYRISIYEPQIKLQFNHFLVKDREPLLFHAGMKG
                     MFPKVREAVARIIDPAIIRWIGFSHFESDECGSLNEWLQVAPLAQPLCTVVGALVNVS
                     DFASRAPRWIPEEDILDTGKYRFRLYSTHHLPHSWDAGILFEETKRTLFVSDLFLQGG
                     EVEPLVETDVVGRARKAMIDFQSTQLLNSISYSSTTERQMAKLAALQPRTLAIMHGSS
                     FAGDGGNAIRNLASAMKEVLGKEQ"
     gene            complement(922..1464)
                     /locus_tag="VK429_00450"
     CDS             complement(922..1464)
                     /locus_tag="VK429_00450"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013006778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:complement(1321..1323),aa:Sec)
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HLN90307.1"
                     /translation="MTIQVNAPAPAFELSGVVGKQFQEVKLSDYRGKWVVLFFYPLDF
                     TPIUHSEILEFSRRESEFAVEGAQIIGISTDSKFSHLAWIHQELGELNYPLLADFTKQ
                     VSKEYGVLLERLGAALRGTFVIDPDGLVRAYIVQDLTVGRSVDEILRLVSALKTGELC
                     PVGWSPGKPFLPPIPKNARR"
     gene            complement(1516..1992)
                     /locus_tag="VK429_00455"
     CDS             complement(1516..1992)
                     /locus_tag="VK429_00455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008533483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HLN90308.1"
                     /translation="MEQRPTRVNPSEETIKIGPLGIRFLLTGDDSNGSASVFELLVPL
                     GQKLPAPAHKNDAYEETLYGIVGVLTWTVDGKPIEVGPGQALCIPRGAVHRFDNLGSE
                     DVKQLVVISPAIMGPAYFREAAEVIGAPGGGPPDRARMMDVFRRHGMTLAAPPPAR"
BASE COUNT          442 a          666 c          669 g          459 t
ORIGIN      
        1 cgatatgata ttcgcgtcct gcgcagtaga gttgggatcc gtattgcgac cgtcgggttt
       61 ccttcggcat agaccatccc atccggccgc accatgcgcc ggccggatat ccaccgtccc
      121 atgaggaggg gatcatggcc accgtcaccg agatcgctcc ggacgtctat cgcatttcga
      181 tctacgaacc ccagatcaaa cttcagttca atcatttcct cgtcaaggac agggaaccgc
      241 tgctctttca tgcaggcatg aagggcatgt tcccgaaagt acgggaagcc gtggcgcgga
      301 tcatcgatcc cgcaataatc cggtggatcg gtttcagtca tttcgagtcg gacgagtgcg
      361 gttccctgaa cgagtggctc caggtggccc ccctcgcaca accgctttgt acggtcgtgg
      421 gggccctcgt caatgtttcc gatttcgcgt cccgggcgcc gcgctggatt ccggaagagg
      481 acatcctcga caccgggaag tatcggttcc gcctctattc cacccatcac ctgccgcact
      541 cctgggatgc ggggatcctc ttcgaggaaa caaaacgaac gctattcgtt tcggacctgt
      601 ttctccaggg cggtgaggtg gaacctctcg tcgaaaccga tgtggtgggg cgagccagaa
      661 aggcaatgat cgactttcaa tccactcaat tgctgaactc catctcttac agttccacca
      721 ccgagcgcca gatggcgaag ctggctgcac tccagccgag gaccctggcg atcatgcatg
      781 ggtcctcgtt tgcgggcgat ggagggaatg cgatccgtaa cctggcatcg gccatgaagg
      841 aagttctcgg aaaagagcaa tgacgccccc gaaagcgcgt cggtccacgg attcgtctac
      901 gatgaagaaa gagaatccgg actaacgccg ggcgtttttc gggattggcg gcaaaaatgg
      961 tttcccgggg ctccagccga cggggcacag ctcccctgtt ttgagcgcgg aaacgaggcg
     1021 cagaatctcg tcgacgctcc ttcccacggt caagtcctgc acgatgtacg cccggacgag
     1081 cccgtccgga tcgatgacga acgttccccg cagcgcggcc ccgagcctct cgagcaggac
     1141 gccgtactcc ttcgaaacct gcttggtgaa atcggcaagc agggggtagt tcaactcccc
     1201 gagttcttga tggatccacg ccaggtggga aaacttgctg tccgtgctga tcccgatgat
     1261 ctgcgcgcct tctaccgcga attcgctctc ccgccgggag aactcgagga tctccgagtg
     1321 tcatatgggg gtgaagtcca gcgggtagaa aaacaggacg acccacttcc ccctgtagtc
     1381 agacagcttg acctcctgga actgcttccc cacaacccct gacaactcga acgccggcgc
     1441 cggggcattc acctggatgg tcatgtgcgt cctcctttca tgcccacggg atacgtccga
     1501 ctgaagagcc gcacgctacc tggcaggcgg gggcgcggcc aatgtcatgc catgacgccg
     1561 gaagacgtcc atcatccttg cacggtcggg cgggccaccg ccgggggcgc cgatgacttc
     1621 ggcggcttcg cggaagtacg cggggcccat gatcgcaggg gatatgacga cgagctgttt
     1681 cacatcctcg ctgccgaggt tgtcgaagcg gtgcaccgcg ccccggggga tgcacagtgc
     1741 ctgcccggga ccaacctcga tgggcttgcc atcaacggtc caggtgagga cacccacgat
     1801 gccgtagagg gtctcctcgt aggcgtcgtt cttgtgggcc ggcgccggca gcttctgccc
     1861 gagggggacg agaagctcga acacggacgc gctgccgttt gaatcatcgc ctgtgaggag
     1921 gaaccggatc cccagtggac caatcttgat ggtctcttcc gaaggattga ctctggtcgg
     1981 tcgctgctcc atacctgcct cctcttgatc cctgttttcc attaagatgc ccctcccgtg
     2041 gatcggtttg gcctcggaga gggaatcatc gatgactgtg agggagtgaa ggggaaactc
     2101 gtggggtttg agttcgacag gtttcttgga agcggaatcg tgtgttgtga catcttaaat
     2161 tgataaatat catctggggt tcggggaaat gggaatgccg atgcctgccg tgttcatcgg
     2221 acacggcaac ccgatg
//
LOCUS       DATGYW010000035         1695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_56982, whole genome shotgun sequence.
ACCESSION   DATGYW010000035 DATGYW010000000
VERSION     DATGYW010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56982"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            154..846
                     /locus_tag="VK429_00460"
     CDS             154..846
                     /locus_tag="VK429_00460"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HLN90309.1"
                     /translation="MVRSRWITVIAGALALLSVSTFAAAADPTSYRNREGRYELTLQP
                     RYIASKTLDFDGGTSIDTDDDLGFGMGFGYNFTNKFALHADWSWASMNYNAKIGTTDA
                     GGNPTGTTTASGTLDTSTFALNLSYYFLEGPLTPFVLGGIGWTWVDSNIPSGLPQTGC
                     WWDPWYGYICTSYQNTYAKDYFSYSLGLGGRWDVSPGFFLRGSVVMQWMDTGKAGTTD
                     FPGGRLDIGFLF"
     gene            883..>1695
                     /locus_tag="VK429_00465"
     CDS             883..>1695
                     /locus_tag="VK429_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012595408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HLN90310.1"
                     /translation="MTQVLHPSLYQVNTRVWLTSLSKMLGRPATLDDIPDAALDHMAG
                     MGFDWVWFLSVWQTGAAGRRISRENRDWQKEFRDTLPDLRDEDIGGSGFAITAYAVPA
                     DLGGDAALARLRRRLAKRGLKLMLDFVPNHMALDHPWVEDHPDYFVPGTEDLLAREPQ
                     NYLRVKREKGDVILAYGRDPYFSGWPDTLQLDYSNPRLQEAMIRELEIIAGQCDGVRC
                     DMAMLILPDVFERTWGRKPPQFWPQAIRRVRELAPGFSFMAEVYWDMEWTMQQ"
BASE COUNT          311 a          513 c          546 g          325 t
ORIGIN      
        1 cttcaatctc ctggtcttcc tcgtcgtggg caccccatgg atcctgttcg tcacccggtg
       61 atacctgtcc atcatcgatg aagacggtgg gcattacccg tcatacaacc cggctgcggg
      121 gacgcggtca accaacggag aaggaggcaa cccatggttc gttccaggtg gattaccgtg
      181 atcgcaggcg ctttggcatt gctgtccgtt tcgaccttcg ccgccgcggc ggatccgacg
      241 tcgtaccgca accgcgaggg ccggtatgag ctcacactcc agccgcgcta catcgcttcc
      301 aagacgctcg acttcgacgg aggaacgagc atcgataccg acgacgatct tggattcggc
      361 atgggcttcg gctacaactt cacgaacaag ttcgcgctgc acgccgactg gtcctgggcc
      421 agcatgaact acaacgcgaa gatcggcacg accgacgccg gcgggaatcc taccgggacg
      481 acaacggcca gcgggacgct cgacacctcc acgttcgccc tcaacctgag ctactacttc
      541 ctggagggcc cgctgacccc cttcgtcctc ggggggatcg gctggacgtg ggtggactcg
      601 aacatcccgt cggggttgcc gcaaaccggc tgctggtggg acccgtggta cggctacatc
      661 tgcacgtcct accagaacac ctacgccaag gattacttct cgtacagcct gggactcggc
      721 gggcgctggg acgtttcgcc cggtttcttc ctgcgcggca gcgtcgtcat gcagtggatg
      781 gataccggca aagcgggaac cacggacttc ccgggcgggc ggctggacat cggtttcctc
      841 ttctgatcgg cccggcggga tccttcaacc aggggggaag agatgacgca ggtacttcat
      901 ccatcgctct atcaagtcaa cacgcgcgtc tggttgacat ctctgtcgaa gatgttgggc
      961 cggccggcga ctctggacga cattccggac gccgcgttgg accacatggc ggggatgggc
     1021 ttcgactggg tctggttctt gagcgtgtgg caaacagggg ccgcgggtcg acgaatttcc
     1081 cgggaaaacc gggactggca aaaggagttc agggacacgc tgccggattt gcgcgatgaa
     1141 gacatcggcg gttccggctt tgcgatcacc gcctatgccg tcccggccga tctgggaggc
     1201 gatgcggcgc tggctcgcct gcgtcggcga cttgcgaaac gcggtttgaa gttgatgctc
     1261 gactttgtcc cgaaccacat ggcgctggat cacccctggg tcgaggacca cccggactat
     1321 ttcgtcccgg ggacggagga cctgttggcg cgggagccgc agaactatct ccgggtcaaa
     1381 cgggaaaagg gggatgtgat cctggcgtac ggccgggatc cgtacttctc cggctggccg
     1441 gataccctgc agctcgatta cagcaatccc cggttgcagg aggcgatgat ccgggaactc
     1501 gagatcatcg ccggccagtg cgacggcgtg cgctgcgata tggcgatgct gattcttccc
     1561 gatgtattcg agcggacgtg gggcagaaag cctccgcaat tctggccgca ggcgatccgg
     1621 cgggtgcgcg aactggcccc gggcttcagt ttcatggccg aggtgtactg ggatatggaa
     1681 tggacgatgc agcaa
//
LOCUS       DATGYW010000036         1569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_269854, whole genome shotgun sequence.
ACCESSION   DATGYW010000036 DATGYW010000000
VERSION     DATGYW010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269854"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..825
                     /locus_tag="VK429_00470"
     CDS             <1..825
                     /locus_tag="VK429_00470"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HLN90311.1"
                     /translation="TYFSLAASYLTPVRLVSVVGRDFPKGTLDMLSARGIDLQGLKVA
                     DGVTFHWKGYYEYDLNIAHTVKTDLNVFENFAPVLPASYRESRYVFLGNIDPKLQLDV
                     LAQVREPKIVALDTMNFWIGRSPQLLREVIRSVDIVLVNEAEIRELTGEFNLVKAARK
                     LMRMGPGRVVIKRGEYGVLQLSDGEIFAAPAYPLETIFDPTGAGDSFAGGFMGYLASR
                     DGAALTEMDYRLATIYGSAIASFTVEAFSTERLQGLSREEIDARLSSFRALTEFRV"
     gene            854..>1569
                     /locus_tag="VK429_00475"
     CDS             854..>1569
                     /locus_tag="VK429_00475"
                     /inference="COORDINATES: protein motif:HMM:NF014862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HLN90312.1"
                     /translation="MATLTKAARMAWEIGAAEAARLRHPFIEREHLLIGLCSLRKILQ
                     YLGYTQIESLPVDLLREEADGIERELASLGITGASIRRGVRSRLRPGNAVHPERVVHR
                     SEECKRYFRRAGEIVKDGGEVAVRHLFAAVLEDPGPVVSAVLAGAGISPERLREKLLT
                     ERELELEPIPVREEAGDQPVVPELLSSSETPLLDRYGRDITRAAREGRLLPFVDSDRT
                     RKTLRQLIKVLMMPTKNNPVL"
BASE COUNT          262 a          508 c          542 g          257 t
ORIGIN      
        1 acctactttt ccctcgcggc gagctacctg acgcccgtgc gcctcgtctc ggtcgtcgga
       61 cgggacttcc cgaaggggac gctcgacatg ctctccgccc gggggatcga cctccagggg
      121 ttgaaggtcg cggatggggt caccttccac tggaaggggt attacgagta cgacctgaac
      181 atcgcccaca cggtgaaaac ggacctgaac gtgttcgaga atttcgcccc cgtccttccc
      241 gcatcgtacc gggaatcccg ctacgtcttc ctcgggaaca tcgatccgaa actgcagctg
      301 gacgtcctgg cccaggtgcg cgaaccgaaa atcgtcgcgc tcgacacgat gaacttctgg
      361 atcgggagga gcccgcagct gctgcgggaa gtgatccgga gcgtcgacat cgtcctcgtc
      421 aacgaggccg agattcggga gctgacgggc gagttcaacc tcgtcaaggc ggcccggaag
      481 ctgatgcgca tgggtccggg gcgcgtcgtg atcaagcggg gggaatacgg cgtcctccaa
      541 ctttccgatg gagagatctt cgcagccccg gcgtacccgc tggagacgat cttcgacccc
      601 accggggcgg gggacagctt cgcgggcggg ttcatgggat atctcgcgtc gcgggacggg
      661 gccgccctca cggagatgga ttaccggctg gccacgatct acggcagcgc catcgcctcc
      721 ttcacggtgg aggcgttcag cacggagcgg ttgcaggggc tctcccggga agagatcgac
      781 gcccgcctgt cgtcgttccg ggccctcacc gaattccggg tctgaaccgg ggaaggacgg
      841 agggagatcg accatggcga cgttgacgaa agcggccaga atggcctggg agatcggcgc
      901 ggccgaggcg gcccgccttc ggcacccgtt catcgagcgg gagcacctcc tgatcggcct
      961 gtgcagcctc cggaaaatcc ttcagtacct cggctacacc cagatcgagt cgctcccggt
     1021 cgatctcctg cgggaggagg cggacgggat cgagcgggag ctggcgtccc tcgggatcac
     1081 cggcgcgtcg atccgccgcg gggtgcggtc ccgcctccgg ccggggaatg cggtccaccc
     1141 ggagcgggtg gtccaccgca gcgaggagtg caagcggtac ttccgccggg cgggggagat
     1201 cgtgaaggac gggggggagg tcgccgtgcg ccacctgttc gccgccgttc tcgaggaccc
     1261 gggaccggtc gtttccgcgg tgctcgcggg cgcggggatt tccccggaac gtctccgcga
     1321 gaagttgctc acggaaaggg agttggagct ggaaccgatc ccggttcgcg aggaggccgg
     1381 ggatcaaccg gtcgttccgg agctgctttc ttcctcggag acgccgctcc tggaccggta
     1441 tggcagggac atcacccggg ccgcgcggga ggggcgcctc ctgccgttcg tcgactccga
     1501 ccgcacccgc aagacccttc gccagctcat caaggtcctg atgatgccca ccaagaacaa
     1561 ccccgtcct
//
LOCUS       DATGYW010000037         2649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_217042, whole genome shotgun sequence.
ACCESSION   DATGYW010000037 DATGYW010000000
VERSION     DATGYW010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2649
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217042"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VK429_00480"
     CDS             complement(<1..470)
                     /locus_tag="VK429_00480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HLN90313.1"
                     /translation="MAEDTRIPLLEHEPSETPVFTAANLLEAARIRKGLPKVTVPAGC
                     LLDFDGELLQHLAETGRAVEDPVWPCFHTRLFRWREGSAEYGVIGGTIGAPFAVLVAE
                     ELFALGCRALVSISSAGLVAERFAPPFFLLINRALRDEGTSCHYMPLSPYADADP"
     gene            complement(463..819)
                     /locus_tag="VK429_00485"
     CDS             complement(463..819)
                     /locus_tag="VK429_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015839255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HLN90314.1"
                     /translation="MDSNRAYERAELLKAFAHPTRLQILAELGKGTRCVTDMEDILPV
                     TQVNISQHLTVLRNAKLVDFAQDGGTRCYYLSRPKLVEGVLALITSDHPAIRKTKEQI
                     DREKAIGGKEKVAARG"
     gene            complement(872..>2649)
                     /locus_tag="VK429_00490"
     CDS             complement(872..>2649)
                     /locus_tag="VK429_00490"
                     /inference="COORDINATES: protein motif:HMM:TIGR01511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042625 - ATPase-coupled ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HLN90315.1"
                     /translation="LAAVAGGWYVSRRAWQAARHHQLEMNTLMTVAAVGALLIGEWAE
                     AGSTMFLFSLAQLLEARSMDRARNAIRRLLDLSPKEATVIGQGGEVRLSVERIAVGDR
                     VLLRPGERIPVDGVVMEGISFVNQAPITGEAVPVSKTQGSPVLAGSLNGKGPLEIRVT
                     RLASDSSLARIIHLVENAQAQRARSQAFIDRFARYYTPAMIAFALALVIVPPLLFGQP
                     FSTWFYRGLVVLVIACPCALVISTPVSIVCGLTRAAREGILFKGGAYLEDLGRIRTFF
                     FDKTGTLTLGKPEVVSVQPFRGRTEHEVLRLAAAIESRSEHPLAEAILDVARNRGIQP
                     SVATDVQAVPGMGIRGRVNGEICLVGNPSFFTGTSGIAGPDLEAVKEWEARGATVVVV
                     GTGKEAFGMIAIQDSVRKEAADALGELRSLGATDLTMLTGDNPETGKAVAYLLPMDAV
                     HAGLLPEQKIALVREAVEKGEKVAMVGDGINDAPALAQATVGVVMGAAGTDVALEAGD
                     VVLMGDDLRKIPFAVRLGRRTLRTIRFNVVFSLASKAVFLVLAPLGFVTLWMGVAADM
                     GVSLLVVGNSMRLLAGSNGSGRRRS"
BASE COUNT          501 a          874 c          808 g          466 t
ORIGIN      
        1 ggatcggcat ccgcatacgg gctgagaggc atgtaatggc agcttgtccc ctcgtcgcgc
       61 aaggccctat tgatcaagag gaagaagggc ggggcaaacc gttcggccac aagccccgcc
      121 gaggatatgc ttacaagtgc gcggcatcca agggcgaaca gttcctcggc gaccaggacg
      181 gcaaacgggg ctccgatcgt tccgccgatc acaccgtatt cggcgctccc ttcccgccaa
      241 cggaagaggc gtgtatggaa acagggccag acgggatcct cgacggccct tcccgtttca
      301 gcaaggtgct ggagaagttc cccgtcgaag tccaggaggc atccggccgg gacagtaacc
      361 ttgggcaacc ccttgcggat ccgggccgcc tccagcaggt ttgccgccgt gaagacaggc
      421 gtttccgaag gctcgtgttc cagaagaggt atccgggtgt cttcagccac gggccgccac
      481 cttctccttc ccacctatgg ccttttccct gtcgatctgc tccttggtct tccggatggc
      541 tgggtgatcc gaagtgatta gcgccagtac accctcgaca agcttcggcc ggctcaggta
      601 gtagcaccgg gtccccccgt cctgggcgaa gtccaccagc ttggcatttc gaagaaccgt
      661 gaggtgctgg gagatgttga cctgggtgac gggaaggatg tcctccatgt ccgtcacgca
      721 ccgcgtcccc ttgccaagtt cagccaggat ctggaggcgg gtggggtgcg cgaaggcctt
      781 gagaagttcc gcccgttcgt aggcgcggtt ggaatccata tcccctcctt ttacgttatt
      841 agaagattct aatataatta aaacaatatt ttcaacttcg tcggcgcccg gagccgttcg
      901 agcccgcgag gagccgcatg ctgtttccaa cgacgaggag cgataccccc atgtccgcag
      961 cgacgcccat ccagagggtg acgaacccca agggggcgag aacgagaaag accgccttgg
     1021 acgccaggga aaagacgacg ttgaaccgga tggtccggag cgtcctgcgc cccagccgga
     1081 cggcgaaggg aatctttcgc aggtcgtccc ccatgagcac aacatccccc gcctccagcg
     1141 ccacgtcggt cccggccgcc cccatgacca ctcccacggt ggcttgggcc agggccgggg
     1201 cgtcgttgat cccgtcgccc accattgcga ccttctcccc tttctccacg gcctcccgaa
     1261 cgagcgcgat cttttgctcc ggaagaagcc ccgcgtgcac cgcatccatg ggaagcaggt
     1321 aagcaacggc ctttccggtc tcgggattgt ctccggtcag catcgtcagg tcggtcgccc
     1381 cgagactgcg cagttccccg agggcgtcag cggcctcctt ccgaaccgaa tcctgaatgg
     1441 cgatcatccc gaacgcctct tttccggttc cgacgacgac tacggtggct cctcttgcct
     1501 cccactcctt caccgcttcc aggtccggac cggcgatccc cgaagttccg gtgaaaaagg
     1561 atgggttgcc cacgagacag atctcaccgt taacccggcc cctgattccc atgccgggca
     1621 cggcctgcac atcggtcgcc accgaaggtt ggatccccct gtttctcgcg acatccagaa
     1681 tggcttcagc gagagggtgc tcggaccggg attcgatcgc cgctgccagg cgtaggacct
     1741 catgctccgt tcggccacgg aagggctgga cggatacgac ttcgggtttg ccgagggtca
     1801 gtgtcccggt cttgtcgaaa aagaaggtgc ggatccgtcc caggtcctca aggtatgccc
     1861 cgcctttgaa gaggatcccc tcccgggcag cccgcgttag gccgcagacg atggagacgg
     1921 gcgtcgagat cacaagagca catgggcagg cgatcaccag gaccacgagc ccccggtaaa
     1981 accaggtgga aaagggttgc ccgaaaagga gcggcggaac gatgacgagc gcgagtgcaa
     2041 aggcgatcat cgcgggcgtg taatatcgcg cgaaccggtc gatgaaggcc tggctccggg
     2101 cacgctgggc ctgggcgttc tccacgaggt ggatgatcct cgccagcgaa ctgtcggagg
     2161 cgagcctggt gacccggatt tcaagcggtc cctttccgtt caggctcccc gccaggacgg
     2221 gagagccctg agtcttcgat accggaaccg cctcccccgt gatcggagcc tggttaacga
     2281 aggaaatccc ttccataacg actccgtcca ccggaatccg ttcgcccggc cggagaagaa
     2341 cgcggtctcc caccgcgatc cgttcgacgg acagccggac ctctccgccc tgcccgatga
     2401 cggtggcctc cttgggggaa aggtcgagaa ggcgtcggat cgcgttgcgg gcgcggtcca
     2461 tgctcctggc ctccagcagc tgggccaacg aaaagaggaa catcgtcgac cccgcctccg
     2521 cccactcccc gatcaggagg gcgccgaccg cggcgacggt catcagcgtg ttcatctcca
     2581 gctggtggtg cctcgcggcc tgccacgcac ggcgggagac gtaccatccc cccgcaaccg
     2641 ccgccagga
//
LOCUS       DATGYW010000038         2111 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_57185, whole genome shotgun sequence.
ACCESSION   DATGYW010000038 DATGYW010000000
VERSION     DATGYW010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57185"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1211)
                     /locus_tag="VK429_00495"
     CDS             complement(<1..1211)
                     /locus_tag="VK429_00495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90316.1"
                     /translation="MAEPVFAAGGVSSRLELSPERQNLLALFLLFLITIPMLTKIFTS
                     DFGTHLAIGRHIWEHREISAPEFLNYTALGMTNYFHEWGFQLILHAVYSVGGAIGVSL
                     FCWLAVCCIFFLIYRVCVLRGAHPLLAVLAIFCFSGFLRIRIQPRPEILTYLFISICL
                     YIFSEYYYGARKKLAYVFPVLMLLWGNIHGSYLVGLILWGVFFSDALARAAWKKELGW
                     KKLKDWVGPQLVIGALGLVFCGFGPDGYSMLLMPLRVLSRDKAGGGLQGTFMSISELT
                     PVVGTGMYVYYKAAAVFASIALVLGAFGRRVFLLDILLAVMAFKGAWESARAVSMLGL
                     FLSPGISIQITGFLEWVCGKLERVGAITKGHEISRSQRRRKPAEGERRVKAQTKPGEG
                     AGGPKSNWVYHL"
     gene            complement(1341..>2111)
                     /locus_tag="VK429_00500"
     CDS             complement(1341..>2111)
                     /locus_tag="VK429_00500"
                     /inference="COORDINATES: protein motif:HMM:NF024247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HLN90317.1"
                     /translation="QGSMKGVCTPLLNCYACPSALLSCPIGTLQHFAAAGNVSWYTVG
                     TLSVVGASVGRMTCGTLCPFGALQDLLYKFRGWKASLPHWTRYLRYAVLAGLVFVIPY
                     LTRESWFSKLCPVGTLMGGLPWVSMNAGIRSMIRSLFWVKIAILLFFVTTATMVKRPF
                     CRAICPLGAIFSLFNKSSFLQLAWDPDTCTRCGKCQEICPVDIRPDRNPTDPDCLRCL
                     DCTRCPSLKLTTVFHRQPFGGTAVPAPVAGSASGTPTH"
BASE COUNT          495 a          651 c          629 g          336 t
ORIGIN      
        1 aggtggtaga cccagtttga ttttggaccg cccgcaccct ccccgggttt ggtctgcgct
       61 ttgacccttc tctctccttc cgcaggtttc cgtctacgtt gagagcggga tatctcgtgg
      121 cccttcgtta tcgcacctac cctctccaac tttccacaaa cccactcaag gaatccggtg
      181 atctggatgg aaatcccggg agaaaggaac aggccaagca tcgaaacggc acgggcggat
      241 tcccaagccc ctttgaacgc catcaccgcc aacagaatat ccagcagaaa cacccggcgc
      301 ccgaacgcgc caagaacaag ggcaatcgag gcgaacaccg ccgccgcctt gtaatagacg
      361 tacatccctg tccccacaac cggggtcaac tcggaaatcg acatgaacgt gccctggaga
      421 ccccctccgg ccttgtccct ggaaaggaca cggagcggca tgagcaacat gctgtacccg
      481 tcgggaccga acccgcagaa caccaatccc agagcgccga tgaccagttg cggccctacc
      541 caatccttca gctttttcca accgagttcc ttcttccagg cggcacgggc caaggcatcc
      601 gagaaaaaca ctccccagag gatcaatccg accaggtagc tcccgtgaat attcccccaa
      661 agaagcatca gcacggggaa gacgtacgcc agcttcttcc gcgccccgta gtaatactcg
      721 gaaaaaatgt acagacagat cgagatgaac aggtacgtca ggatttccgg gcgaggctgg
      781 atccggatcc tgaggaatcc ggaaaaacag aagatcgcca gaactgccag caagggatgc
      841 gcacccctca ggacgcatac gcggtaaatc agaaagaata tgcaacagac ggcgagccag
      901 cagaagagcg aaaccccgat cgccccccca acggaataca ccgcgtgcag gatcaactga
      961 aatccccact cgtggaagta gttcgtcatg cctaacgcgg tatagttgag gaactccgga
     1021 gcgctgatct cccggtgttc ccagatgtgc cgcccgatgg cgaggtgcgt cccgaagtcg
     1081 ctcgtgaaga tcttcgtgag catcgggatc gtgatgagga aaagaagaaa gagcgcaaga
     1141 aggttctgcc gctcggggga aagttccaag cggctcgata cacccccggc tgcgaagacc
     1201 ggttccgcca tctagctggc gtctccaaaa cgcaggatca tctacggata cctctccggg
     1261 attttcttcc gggggaatgc ttccgggcgc tacgcctatc gacggcggct cacgatcata
     1321 aagatatcat atggtcgaca tcagtgggtg ggcgtgccgg aggcgctgcc ggcgacgggt
     1381 gccggcacgg ccgtcccgcc gaacggctgc cggtgaaata cggtggtgag cttgaggctc
     1441 gggcaccggg tgcagtcgag gcaccgcagg cagtccgggt cggtcgggtt ccggtcggga
     1501 cggatgtcga ccggacagat ctcctgacac ttcccgcacc gcgtgcaggt atcggggtcc
     1561 caggcgagct gcaggaagct cgacttgttg aacagggaga agatcgcccc gagggggcag
     1621 atcgcccggc agaaggggcg cttcaccatc gtcgccgtcg tgacgaagaa gagaaggatc
     1681 gcgatcttga cccagaacag cgatcggatc atcgagcgga tgccggcgtt catcgacacc
     1741 cacggaagcc cgcccatcag cgtacccacg ggacacagct tcgagaacca gctctcacgg
     1801 gtcaggtacg ggatgacgaa cacgagcccg gccaggacgg catagcggag ataccgcgtc
     1861 cagtgcggca gggacgcctt ccacccccgg aacttgtaaa ggaggtcctg gagggcgccg
     1921 aaggggcaaa gggttccgca agtcattcgt cccacggacg cgccgacgac cgaaagggtc
     1981 ccgaccgtgt accacgagac gttcccggcc gccgcgaaat gctgcagcgt gccgatggga
     2041 caggaaagca gggcggaggg gcatgcgtag cagttcagca acggggtgca gacgcccttc
     2101 atggacccct g
//
LOCUS       DATGYW010000039         1802 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_324884, whole genome shotgun sequence.
ACCESSION   DATGYW010000039 DATGYW010000000
VERSION     DATGYW010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_324884"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1401)
                     /gene="topA"
                     /locus_tag="VK429_00505"
     CDS             complement(<1..1401)
                     /gene="topA"
                     /locus_tag="VK429_00505"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HLN90318.1"
                     /translation="MARSLVVVESPAKAKTIQKILGKGFEVLSSMGHVKDLPKSRLGV
                     DVENGFTPSYIVIKDRKMVLGDILNSARLATTVFLAPDPDREGEAIAWHIADAIRGDV
                     GKKRKGAPKKAKAAPADAEPAAPPIERVLFHEITKKGITDGMAHPRPLDRHKFDAQQA
                     RRILDRIVGYTLSPLLWTKVRRGLSAGRVQSVAVKMVCGREKEIAAFVPEEYWSLIAR
                     LEGRTPPPFPSKLVEVGGKKVRPRDAEETAVLRAAVENGPFVVRDVRKKLRRRQAPAP
                     FTTSKLQQEASKALRMQAWRTMMVAQSLYEGVEIPGAGLVGLITYMRTDSVRVADEAM
                     AAVRNHIGKQYGAAYLPETPNVFRNRKSAQDAHEAIRPTSLEHPPASLKGILNRDQLR
                     LYELIWKRFVASQMAAAEFEQTAVDILCDPAGAPAGGYLFRASGSVPKFPGFLEVYEA
                     AVPEGRGESGNGETHEE"
     gene            complement(1427..>1802)
                     /locus_tag="VK429_00510"
     CDS             complement(1427..>1802)
                     /locus_tag="VK429_00510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HLN90319.1"
                     /translation="PERSGALITARLALEQGRDVMVVPGNPWFAHTAGSNRLLREGAT
                     PVCSVADVHGVLGCPPSVAVSGVAKRVLDALEGERHVGEIAEAVSVPVQELLPCLMEM
                     ELANLVEKRPGNYYKKLSVPGS"
BASE COUNT          278 a          634 c          564 g          326 t
ORIGIN      
        1 ctcctcgtgt gtctctccgt tcccgctctc gccccggccc tccgggacgg cagcctcgta
       61 cacctcgagg aatcccggga acttcggcac ggaaccgctg gcccggaaca ggtaccctcc
      121 ggcgggcgcc ccggcgggat cgcacaggat gtcgaccgcg gtctgctcga actcggccgc
      181 ggccatctgc gaagcgacga accgtttcca tatcagttcg tagaggcgca gttggtcccg
      241 gttgaggatc cccttgagag acgccggtgg atgttcgagg gaggtcggac ggatcgcctc
      301 gtgggcgtcc tgggcggatt tccggtttcg gaagacgttg ggcgtctctg gcagatacgc
      361 ggcgccgtac tgcttgccga tatggttccg gacggcggcc atcgcctcgt cggcgacgcg
      421 gaccgaatcg gttcgcatgt aggtgatgag gccgacgagc cccgccccgg ggatctccac
      481 tccttcatag agggactggg cgaccatcat cgtccgccac gcctgcatcc gcagcgcttt
      541 cgacgcctcc tgttgaagct tggaggtcgt gaacggagcg ggggcctgcc gccgccgcag
      601 ttttttccgc acgtcgcgga cgacgaaggg accgttctcc accgcggcgc gcaggaccgc
      661 cgtctcctcc gcgtcgcgcg ggcgaacctt cttcccgccc acctccacca gcttcgacgg
      721 gaacggggga ggcgtcctcc cttccagccg cgcgatcagc gaccagtact cctcgggcac
      781 gaaggcggcg atctccttct cccgcccgca gaccatcttg accgccaccg actgcaccct
      841 tcccgccgac agaccccgac ggaccttcgt ccacaggagc ggggagaggg tgtacccgac
      901 gatccggtcg aggatgcggc gcgcctgctg cgcgtcgaac ttgtgccggt cgagggggcg
      961 gggatgcgcc atcccgtcgg tgatcccctt tttcgtgatc tcgtggaaaa gcacacgctc
     1021 gatcggaggt gcggccggtt ccgcatccgc tggggcggcc ttcgccttct tcggcgctcc
     1081 ttttcgtttc ttccccacgt caccccggat ggcgtcggcg atgtgccagg cgatcgcctc
     1141 gccctcccgg tcggggtcgg gcgcgaggaa gacggtcgtc gccaaccgcg cggaattcaa
     1201 aatgtccccg aggaccatct tccgatcctt gatgacgatg tacgaggggg tgaaaccgtt
     1261 ctcgacgtcg acgccgagac ggcttttcgg gaggtccttg acgtgcccca tggaggaaag
     1321 gacctcgaac cccttcccca ggatcttttg tatcgtcttc gccttcgcgg gcgactcgac
     1381 gacgaccaac gaccttgcca ttgcgcctcc tgaacgaacc gcggggtcag ctcccgggaa
     1441 cggacaactt cttatagtag ttccccggcc ttttttccac cagattcgcc agttccattt
     1501 ccatcaggca cggaaggagc tcctggaccg gcacggacac tgcctccgcg atctccccca
     1561 cgtgccgttc gccttcgagc gcgtcgagca cccgcttcgc aacaccagaa acagcaacgg
     1621 agggcggaca tccgagaact ccatgcacgt ccgcaaccga gcagaccggg gttgccccct
     1681 cccgcagcag gcggttgctg ccggccgtgt gggcgaacca ggggttcccg ggcacgacca
     1741 tcacgtcgcg tccctgttcg agggcaagcc tcgcggtgat cagcgcgccg ctgcgctccg
     1801 gc
//
LOCUS       DATGYW010000040         1558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_217125, whole genome shotgun sequence.
ACCESSION   DATGYW010000040 DATGYW010000000
VERSION     DATGYW010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_217125"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..930)
                     /locus_tag="VK429_00515"
     CDS             complement(<1..930)
                     /locus_tag="VK429_00515"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014857030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HLN90320.1"
                     /translation="MGFVDSHILSLMTFLPVLGAAVLLCVPKGNDNVVRWIAAVASFL
                     PLVLAVKLWFAYDRAMAGVNVASQFQFVEHYLWIPSINVEYFVGADGISMPLLMLTAL
                     LSFLAVIGSFGITNKVKGYMALFLLLETGMMGVFASLDFFLFYVFWEVMLLPMYFLIG
                     IWGGPRKEYAAIKFFLYTLAGSVLMLLALLALYFNTTNPETGGQTFNLLHYMTQGSHN
                     AWLKGFDVRILLFLGLFIGFAIKVPLFPFHTWLPDAHVEAPTAISVILAGVLLKMGTY
                     GLMRISFPVFHRGPGREDRDGAEQGGQQHQQDAQ"
     gene            complement(949..>1558)
                     /locus_tag="VK429_00520"
     CDS             complement(949..>1558)
                     /locus_tag="VK429_00520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HLN90321.1"
                     /translation="MEHAAVMGGEATHAAAPAEGGDHAAVPATYGEKAGAPAHAGAGE
                     HDAHLAHMAHSYAMYSSVAVGTLGIFLGFVVYLFGWINPARVANSVKPLYNFLLNKWY
                     FDELYDKTVIGGSIALAKFLAWFDLHVVDGLVNLAAQLGVFASFLVGKFDNYVVDGAV
                     NGLASATIGGGSILRRLQTGKLYHYVFVLAGGALVIFLIKAF"
BASE COUNT          331 a          494 c          500 g          233 t
ORIGIN      
        1 ctgagcatcc tgctggtgct gctgaccacc ctgctcagcc ccatctcgat cctctcgacc
       61 tggaccgcgg tggaagaccg ggaaggagat ccgcatcagg ccgtacgtcc ccatcttcag
      121 cagaacgccg gcgaggatga cggagatcgc cgtgggggcc tcgacgtgcg cgtcgggcag
      181 ccacgtgtga aacgggaaga gcggcacctt gatggcgaaa ccgatgaaca ggccgaggaa
      241 gaggaggatc cggacgtcga atcccttcaa ccacgcgttg tggctcccct gcgtcatgta
      301 gtggaggagg ttgaaggtct ggccgcccgt ttcgggattc gtcgtgttga agtagagggc
      361 cagcagcgcc agcagcatga ggaccgagcc ggccagggtg tagaggaaga acttgatcgc
      421 cgcgtactcc ttccggggcc cgccccagat gccgatcagg aagtacatcg gcagcagcat
      481 cacttcccag aagacgtaga agaggaagaa gtcgagggag gcgaagacgc ccatcatccc
      541 ggtttcgagg aggaggaaga gggccatgta ccccttgacc ttgttcgtga tcccgaagga
      601 accgatgacc gcgaggaatg agagcagggc cgtcagcatc aacagcggca tcgagatgcc
      661 gtccgctccc acgaagtact ccacgttgat cgacgggatc cagaggtaat gctccacgaa
      721 ctggaactgg ctggccacgt tgacgcccgc catggcccgg tcgtaggcga accacagctt
      781 gaccgccagg accagcggga ggaaggaggc cacggcggcg atccaccgga ccacgttgtc
      841 gttccccttg ggaacgcaca ggagcaccgc cgccccgagg accggaagga acgtcatgag
      901 cgacaggatg tgactatcga cgaaacccac gaaagaccac ctccgttctc agaaagcctt
      961 gatcaggaaa atgacgagcg cgccgcccgc cagcacgaac acgtagtggt acagcttccc
     1021 ggtctgcagc cggcgaagga tcgatccgcc gccgatcgtc gcgctcgcga ggccgttcac
     1081 ggcgccgtcg acgacgtaat tgtcgaactt cccgacgagg aacgaggcga acaccccgag
     1141 ctgcgcggcg aggttcacca ggccgtccac cacgtgcagg tcgaaccagg cgaggaactt
     1201 cgccagggcg atcgatccgc cgatcaccgt cttgtcgtac agttcgtcga agtaccactt
     1261 gttcagcagg aagttgtaaa gcggcttcac gctgttcgcc acccgggccg ggttgatcca
     1321 gccgaagagg tagacgacga agccgaggaa gatgcccaag gtccccaccg ccaccgagga
     1381 gtacatcgcg tacgagtggg ccatgtgcgc gaggtgggcg tcatgttctc cggcccccgc
     1441 atgcgcgggc gcccccgcct tctccccata agtcgccgga acagcggcat gatccccgcc
     1501 ctcggcggga gcggcggcgt gggtagcctc gccgcccatc accgccgcgt gctccatc
//
LOCUS       DATGYW010000041         1629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_162270, whole genome shotgun sequence.
ACCESSION   DATGYW010000041 DATGYW010000000
VERSION     DATGYW010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162270"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..860
                     /locus_tag="VK429_00525"
     CDS             <1..860
                     /locus_tag="VK429_00525"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HLN90322.1"
                     /translation="SMAGIPRGRQFEKYRQEIYKMVVHPVLSSGTGMIISEGRQATDR
                     ALLRLMRRLEVKGFLVAPVKSPSAAIGIMAAATPLDGRYLEEGDLKLLSVLANFAAIA
                     LENAALIGHLDKKARKLTAIFEISKALNEQSDPAVLFQLIVDRATELMGASSGSVIRM
                     DPDSGTLCIEAERGLGPEVKNAMRLRVGEGITGWVAREGEPVLVPDVRKDPRYVQANP
                     EVRSEMAVPVKWGSEVMGVINLDHFQVGGFSEEDLELLIAFANAAAVALRNANALCGW
                     PQKTDPGKE"
     gene            857..>1629
                     /locus_tag="VK429_00530"
     CDS             857..>1629
                     /locus_tag="VK429_00530"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HLN90323.1"
                     /translation="MTPVHGTVLVARPLWPVLGRVGNLLSLRGYSVETAGSWSALLAE
                     QGRRAGLAAVLLGEYGSVAEEEGILRRFREGGGSGIPVLLIGGQSAARGTRRFREAGV
                     DMVFAADLPEEEILDRAQPLLAYGEMYREAVLAGRELSDLAMRDELTGLPDRRRFFLD
                     LERSAETARRIGRPLSCIVTDIDDLRRVNEAHGPGVGDNVVRQFGGVLSRIKRSYDTL
                     ARLGGDEFGWLLLGVGRDEALRAAERAHRRIAECVFDGT"
BASE COUNT          257 a          498 c          614 g          260 t
ORIGIN      
        1 ggtcgatggc ggggatcccg cgggggcggc agttcgagaa gtaccggcag gagatctaca
       61 agatggtcgt ccatccggtc ctttcctccg ggaccgggat gatcatctcg gaagggaggc
      121 aggcgacgga ccgcgccctc ctgcggctga tgcgccgtct ggaggtgaag gggttcctcg
      181 tcgcgccggt gaagagtccc tcggccgcga tcgggatcat ggccgccgcg acgccgctgg
      241 acgggcggta tctggaggag ggggacctga agctcctctc cgttctcgcg aacttcgcgg
      301 cgatcgccct cgagaacgcg gcgctgatcg ggcacctcga caagaaagcg cgcaagctga
      361 ccgcgatctt cgagatcagc aaggcgttga acgagcagag cgacccggcc gtcctgttcc
      421 agctgatcgt cgaccgcgcg acggagctga tgggcgcctc ctccgggtcg gtcatccgca
      481 tggatcccga ttcggggacg ctctgcatcg aggcggagcg gggcctgggc cccgaggtga
      541 agaacgcgat gcggctgcgc gtcggggagg ggatcaccgg gtgggtcgcg cgggaagggg
      601 agccggtgct cgtccccgac gtgcgaaagg acccccgcta cgtccaggcg aatcccgagg
      661 tgaggtccga gatggcggtt ccggtcaaat ggggatccga agtgatgggg gtgatcaacc
      721 tcgatcattt ccaggtcggg ggattctcgg aagaagacct cgaactcctc atcgcattcg
      781 cgaatgcggc ggcggtggcg ctgcgaaacg caaacgccct ctgcggatgg ccgcagaaga
      841 cggaccccgg gaaagaatga cccccgtgca tgggaccgtt ctcgtcgccc gtcctttatg
      901 gcccgtcctc gggcgcgtcg ggaacctgtt gtccctacgc ggctactccg tggagacggc
      961 cggttcctgg agcgcgctcc tcgcggagca gggaaggcgg gcggggctcg cggcggtcct
     1021 gctgggggaa tacggaagcg tcgccgagga agaggggatc ctgcggcggt tccgggaggg
     1081 cggcggatcg gggattcccg tactcctgat cggcggacag agcgccgccc gggggacccg
     1141 ccggttccgc gaggcggggg tggacatggt cttcgccgcg gatcttccgg aggaggagat
     1201 cctcgaccgt gcgcagccgc tcctcgcgta cggggagatg taccgggaag ccgtcctcgc
     1261 cggccgggaa ctttcggacc tcgccatgcg ggacgagctg accgggttgc ccgaccggcg
     1321 ccgtttcttc ctcgatctcg agcgttccgc ggagacggcc cgccgcatcg gtcggcccct
     1381 gtcgtgcatc gtaacggata tcgacgacct ccggcgcgtc aacgaagcgc acgggccggg
     1441 ggtgggggac aacgtggtcc ggcaattcgg cggcgttctg agccgtatca agaggagtta
     1501 cgacaccttg gcccgcctgg gaggagacga gttcggctgg ctccttctgg gtgtcggtcg
     1561 cgacgaggcg ttgcgcgccg cggagagggc gcatcggcgg attgccgaat gcgtcttcga
     1621 cgggaccca
//
LOCUS       DATGYW010000042         1614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_1567, whole genome shotgun sequence.
ACCESSION   DATGYW010000042 DATGYW010000000
VERSION     DATGYW010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1567"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..726)
                     /locus_tag="VK429_00535"
     CDS             complement(<1..726)
                     /locus_tag="VK429_00535"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HLN90324.1"
                     /translation="MNRARIILKRILTPVTILMVPHGRTRSFSIRVPVAAVAASVCLF
                     LTGTAFVAAVSVRAMEYHRMQARLSLLSAQFLEMKGTMLSLKQAEKDFRKLFSLKSKT
                     AVLESADPGDTGSLDMEVLRGQIETAMQSVSEIRGYIAEQKDIHLSTPFGWPAAGTLS
                     SPYGYRNHPVHEERKFHTGVDISVPSGSEVKATADGIVSFAGWTTNSGIVVVAEHGHG
                     FSTAYAHNGKALVRVGQRIARGEV"
     gene            1028..>1614
                     /locus_tag="VK429_00540"
     CDS             1028..>1614
                     /locus_tag="VK429_00540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015352901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN90325.1"
                     /translation="MGIHTAGAADTPLVELRALTKSYPEGGGERVVFRDLSAGIRRGE
                     TVALLGRSGSGKSTLLNLIGGIDLPTAGEVLLDGTNLTALSEQRRTLFRRRHIGLVFQ
                     SFNLIPTLTVMENLLLPLELNGRTGGRARSAALELLARIGLADRATTYPDRLSGGEQQ
                     RVAVARAVVHDPVLLLADEPTGSLDAETGMRVLELL"
BASE COUNT          295 a          510 c          520 g          289 t
ORIGIN      
        1 cacctcgccc cgggcgatgc gctgaccgac ccgtacaagc gccttcccgt tgtgcgcata
       61 ggccgtgctg aacccgtgcc cgtgctccgc gaccaccacg atgccgctgt ttgtcgtcca
      121 tccggcgaag ctcacgatcc cgtccgccgt cgctttcacc tcgctgccgg agggaacgga
      181 gatgtccaca ccggtatgga acttcctctc ctcgtgcacc gggtgattcc ggtaaccgta
      241 gggggaggaa agcgttccgg ccgcaggcca gccgaagggg gtggagagat ggatgtcctt
      301 ctgttcagcg atatacccac ggatctccga gaccgactgc atcgccgtct ctatctgtcc
      361 tctcaacacc tccatgtcga gagatccggt gtcgccggga tccgccgact ccaggacggc
      421 ggttttcgac ttgagggaga acagcttccg gaaatccttt tccgcctgtt tcagggaaag
      481 catcgtcccc ttcatttcga ggaactgcgc ggagaggagc gacagtctcg cctgcatccg
      541 gtggtactcc atggcccgga ccgacacagc agcgacgaaa gcggttccgg tcaggaacag
      601 gcagaccgat gcggcgacgg cggccaccgg gacccggata ctgaaggacc ttgtccggcc
      661 gtgggggacc atcaggatgg tcacgggggt taggatccgt ttcaggatta tccgcgcgcg
      721 gttcatagcg accccctccc cgatgccgga atgacggaca ctggaggaac ggacggaaga
      781 atgcaacagg cattcccaag ggggatcaag ataagctact gtattacaag gcgaatattt
      841 tccagcccgc acgatgcgat tgcattttcc ggatccgggc ggataacggt gacaggattg
      901 aaattccggg cttcgttcgg agcggttccc ctaatcccgg gaacctttcc cggaacgcgc
      961 gccatctgtt aattggtccc aggcacttcg ggggaccggg aatccattcg ggatcaggga
     1021 gaggtcgatg ggaattcata cggcgggagc cgcggatacg cccctcgtgg aactgcgcgc
     1081 gctgacgaag agctacccgg aggggggagg agagcgggtc gtgttccggg atctctccgc
     1141 cggtatccgc cggggggaaa cggtggccct cctcggtcgc agtggctcgg ggaaatcgac
     1201 cctcctgaac ctcatcgggg gcatcgacct ccccaccgcg ggcgaggtgc tcctcgacgg
     1261 gacgaacctg acggccctgt ccgagcagcg gcgcaccctg ttccgacgtc gtcacatcgg
     1321 cctcgtcttc cagtcgttca acctcatccc cacactgacg gtcatggaaa accttctcct
     1381 cccgttggaa ctgaacggca ggaccggagg gcgggcgcgt tcggcggcgc tggagctcct
     1441 cgcgaggatc ggcctcgccg accgggccac gacatacccg gaccgtcttt cgggcggaga
     1501 acagcagcgg gtcgcggtgg cccgcgcggt ggtccacgac ccggttctcc tgctggcgga
     1561 cgaaccgacg ggtagtctcg atgcggaaac ggggatgcgg gtgctcgagc tcct
//
LOCUS       DATGYW010000043         1970 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_110885, whole genome shotgun sequence.
ACCESSION   DATGYW010000043 DATGYW010000000
VERSION     DATGYW010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1970
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110885"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VK429_00545"
     CDS             <1..243
                     /locus_tag="VK429_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015718744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HLN90326.1"
                     /translation="AGVASAEDIDTAMKLGCGMPMGPFELMDYTGVEISYYVGEIFHN
                     YTKEARFAPPGLVRNMVKAGYLGKKTGKGFYDYPAK"
     gene            295..1644
                     /locus_tag="VK429_00550"
     CDS             295..1644
                     /locus_tag="VK429_00550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase"
                     /protein_id="HLN90327.1"
                     /translation="MAWSREETIGHDEMRRIQLGKWQKFVSYVYGKNPVYKKKMDKAK
                     VKPGDIRSLDDVRRLPFTAKAEIREYYPFGLFTAPQEDIVEFHATSGTTGKMVVVGYT
                     RNDVELWTEVMARASTGAGITKNDIVQNIYGYGLFTGGLGMHYGAIRVGAAVIPISGG
                     NTQKQIMLMQDFGSTVLTSTPSFLMRVHEVGVEMGVDFKKLKLRIGLLGAEPWSESMR
                     QSIDERFGIKACDMYGLSEMIGPGVSFECHEMRNGLHVNEDYFYPEIIHPDTGEVLPY
                     GEEGELVITNFANEGQPLMRYRTRDISRLTVAPCSCGRTLVKMQRVSGRTDDMLIIRG
                     VNFFPSQIESIIMKRWGVSPHYLVVVDRPGAMDEVEVKIEVNDEFMKKAAADVLAGSE
                     KDILGDVKTAREKKTHLQRDIKDIIGITVKVTLVAPGTIPRSEGKAKRVDDRRPKAP"
     gene            1656..>1970
                     /locus_tag="VK429_00555"
     CDS             1656..>1970
                     /locus_tag="VK429_00555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015838115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid-binding protein"
                     /protein_id="HLN90328.1"
                     /translation="MKLKQLSIFLENSPGRLYEATHALGEAGINLRSLCISDSSDFGV
                     LRILVSDVGKARQVIMEKQLPARIDDVVAVEIDDTPGSLARILNPFKEKRVNVEYMYA
                     LAG"
BASE COUNT          409 a          577 c          673 g          311 t
ORIGIN      
        1 gcaggcgtcg cgtcggccga ggacatcgac acggcgatga agctagggtg cggcatgccg
       61 atgggtccct tcgaactcat ggactacacc ggcgtggaaa tctcctatta tgtgggggag
      121 atcttccaca attacacgaa ggaggcccgg ttcgcccctc ccggtctggt gcggaacatg
      181 gtgaaggccg ggtacctcgg gaagaagacg ggcaaaggtt tctacgacta tccggcgaag
      241 taggcggttt ccgccggatt cgcaacccac tttacgaaag gaagagacga cgccatggcc
      301 tggagcaggg aagagacgat cggacacgac gagatgcggc ggatccagct ggggaagtgg
      361 cagaagttcg tttcctacgt ctacggaaag aaccccgtct ataaaaagaa gatggacaag
      421 gcgaaggtga agccggggga catccgctcg ctggacgacg tacggagact gccgttcacc
      481 gcgaaggccg agatccgcga gtactacccg ttcggcctct tcaccgcgcc ccaggaggac
      541 atcgtcgaat tccacgccac ctccggcacg accgggaaga tggtcgtcgt cgggtacacg
      601 cggaacgacg tggagctctg gaccgaggtg atggcccggg cgtccaccgg ggccggcatc
      661 acgaagaacg acatcgtcca gaacatctac ggctacggcc tcttcaccgg ggggctcggg
      721 atgcactacg gggcgatccg ggttggggcg gcggtgatcc cgatctccgg cgggaacacg
      781 cagaagcaga tcatgctgat gcaggatttc ggcagcacgg tcctcacctc cacgccctcg
      841 ttcctcatgc gggtccacga ggtcggggtg gagatggggg tcgacttcaa gaagctcaag
      901 ctccggatcg gcctgctcgg cgccgagccg tggagcgagt cgatgcggca gtcgatcgac
      961 gagcggttcg ggatcaaggc gtgcgacatg tacggcctct ccgagatgat cggccccggg
     1021 gtctcgttcg agtgtcacga gatgcgcaac gggctgcacg tcaacgagga ctacttctac
     1081 cccgagatca tccacccaga caccggcgag gtgcttccgt acggcgaaga aggggaactc
     1141 gtcatcacga acttcgccaa cgagggccag ccgctgatgc ggtaccgcac ccgggacatc
     1201 tcgcgcctga ccgtcgcccc gtgctcctgc gggaggaccc tcgtcaagat gcagcgggtg
     1261 tcgggccgga ccgacgacat gctgatcatc cgcggcgtga acttcttccc gtcccagatc
     1321 gagtcgatca tcatgaagcg gtggggcgtg tcgccccact acctggtcgt cgtcgaccgt
     1381 ccgggagcga tggacgaggt cgaggtgaag atcgaggtga acgacgaatt catgaagaag
     1441 gccgccgccg acgtcctcgc ggggagcgag aaggacatcc tcggcgacgt gaagaccgcg
     1501 agggagaaga agacgcatct ccagcgcgac atcaaggaca tcatcgggat caccgtgaag
     1561 gtgacgctgg tcgcgcccgg gacgatcccg cgcagcgagg ggaaggcgaa gcgcgtcgac
     1621 gaccggcgtc cgaaagctcc ttgaaggggg ggaccatgaa gttgaagcag ctgtcgatct
     1681 ttctggagaa ctcgccgggg cggctgtacg aggcgacgca tgcgctgggg gaggcgggga
     1741 tcaacctgcg gtccctttgc ataagcgaca gctccgactt cggggtcctg cggatcctgg
     1801 tgtcggacgt cggcaaggcc cggcaggtga tcatggagaa gcagcttccg gcccgcatcg
     1861 acgacgtggt cgcggtggag atcgacgaca ctcccggctc cctggcccgg atcctgaacc
     1921 cgttcaagga aaagagggtg aacgtcgaat acatgtacgc cctggcgggc
//
LOCUS       DATGYW010000044         1717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_325352, whole genome shotgun sequence.
ACCESSION   DATGYW010000044 DATGYW010000000
VERSION     DATGYW010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1717)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1717
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_325352"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..1229)
                     /locus_tag="VK429_00560"
     CDS             complement(36..1229)
                     /locus_tag="VK429_00560"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HLN90329.1"
                     /translation="MYTLTPAEEIHARVAKLQEGLRAAHLDAAFLVQNADLFYFTGSI
                     QQGILVVPAEGEPVYFVRRVFERAVEESPLSNVRRIASPKEVSGYFAGKNVTFLSIGF
                     ELDVLPVATFLRFQQVFPGAKPEDVSPIVREIRAAKSAYEATHLRNNGKKLAALLSGA
                     RNKIRPGVTEMALQGMLQGEAIGGGHSTINRMRAFNQEPGLGCVISGPDAAVPSYADF
                     PTSGKGLSPYVPAGQGERAIQANEPVIIDLMWAQDGYLVDMARTYSVGPMPAKMEEAY
                     GHAVAVLRAIERGIRPGVVAGDLYAAGLAVAAATPYAENFMGPPGYNTKFIGHGIGIE
                     VDEFPFVAKGAPTVLAPGMVFALEPKFVFPGEGAVGLENTYLVTADGFETLTPLDEGV
                     LRCDG"
     gene            complement(1429..>1717)
                     /locus_tag="VK429_00565"
     CDS             complement(1429..>1717)
                     /locus_tag="VK429_00565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018131990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF169 domain-containing protein"
                     /protein_id="HLN90330.1"
                     /translation="FSGRGDCADIIIKGKKTGEPQVILPCYGDRVFGFAGDDEMAFTF
                     PFGLAEEVVEGLEKTHAGGVRYPVPIYLRFQADFPKSYQELEKIWAESKKP"
BASE COUNT          287 a          565 c          565 g          300 t
ORIGIN      
        1 gttcaggacc ctgatcattt ttcgccgcct ctccttcacc cgtcgcagcg gaggacgccc
       61 tcgtcgagcg gcgtcagcgt ctcgaacccg tccgcggtta ccaagtacgt gttctcgagc
      121 cccacggccc cctcccccgg aaagacgaac ttcggctcga gggcgaacac catgccgggc
      181 gcgaggaccg tgggggcccc cttcgctacg aaggggaact cgtccacctc gatcccgatc
      241 ccgtggccga tgaactttgt attatacccc ggcgggccca tgaaattctc cgcgtacggc
      301 gtggcggccg caacggcaag cccggcggcg tacaggtccc ccgccacgac ccccgggcga
      361 attccccgtt cgatcgcgcg tagcaccgcg acggcgtgcc cgtacgcctc ctccatcttc
      421 gcgggcatcg ggccaacgct gtaggtgcgg gccatgtcca ccagatagcc gtcctgcgcc
      481 cacatcaggt caatgatgac cggttcgttc gcctggatcg cacgctcccc ctgccccgcc
      541 gggacgtatg gggagaggcc tttgcccgac gtgggaaaat cggcgtagga ggggacggcc
      601 gcgtcggggc cggagatcac gcacccgagg cccggctcct ggttgaaggc gcgcatccgg
      661 ttgatggtgc tgtgcccgcc gccgatcgcc tccccctgga gcatcccctg aagcgccatc
      721 tccgtgacgc cgggacggat cttattgcgg gcgccggaga ggagcgcggc gagtttcttc
      781 ccgttgttcc ggaggtgcgt agcttcgtac gccgatttcg cggcgcggat ctcccggacg
      841 atcggggaga cgtcctcggg cttggcgccg gggaagacct gctggaagcg taggaaggtg
      901 gcgacgggga gtacgtccag ctcgaacccg atggagagga aggtgacgtt ctttccggcg
      961 aagtacccgg acacctcttt cgggctcgcg attctccgca cgttggaaag gggcgactcc
     1021 tcgacggcgc gctcgaagac ccggcggacg aagtagaccg gctccccttc cgcggggacg
     1081 acgaggatcc cctgctggat cgacccggtg aagtagaaca ggtcggcgtt ctgcacgagg
     1141 aacgccgcgt ccagatgtgc ggcgcgcaag ccctcctgca gcttcgcgac ccgcgcgtgg
     1201 atctcctccg ccggcgtcag cgtgtacacg aaacctcctc cgtgatgacc cgtttcgtaa
     1261 gaaatatcaa tgtatcacgt cagggacgca ggtcgcagta agggggtcca caaagtgccc
     1321 ctggtactgt ttcagcgggg taccccaggg agggagcgtc catcgtccgg gagtggggtg
     1381 gcgtatggag cgaggcggcg attgcgtcga gaactccgtc ccgatgcgct acggtttctt
     1441 cgactccgcc cagatttttt cgagctcctg gtacgacttg gggaaatcgg cctggaagcg
     1501 caggtagatg gggacgggat atcgcacgcc gccggcgtgg gtcttctcca ggccctcgac
     1561 aacttcctcg gcgaggccga aggggaaggt gaacgccatc tcgtcgtcgc cggcgaaccc
     1621 gaacacgcgg tcaccgtaac aggggaggat cacctgcggc tctcccgtct tcttgccctt
     1681 gatgatgatg tcggcacagt cgccgcgacc ggagaac
//
LOCUS       DATGYW010000045         1545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_111244, whole genome shotgun sequence.
ACCESSION   DATGYW010000045 DATGYW010000000
VERSION     DATGYW010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111244"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1267)
                     /gene="selB"
                     /locus_tag="VK429_00570"
     CDS             complement(<1..1267)
                     /gene="selB"
                     /locus_tag="VK429_00570"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HLN90331.1"
                     /translation="MSKTVILGTAGHIDHGKSSLVRALTGTDPDRLKEEKERGITIEL
                     GFARLSLPSGALAGIVDVPGHERFVRTMVAGAAGVDIVLLVVAADEGVMPQTREHLDI
                     CRLLAVRHGIVVLNKCDKAESEWMDLQEEEIHALVRGTFLEGAPIVRVSAVTGEGLPE
                     LVSAIDRIAAGIPGKDASNLFRLPVDRSFSMKGFGTVVTGTVVGGTVATGEEVAILPG
                     GSVAKVRGLQVHGGPVERSSAGTRTAVNLQGMEKESAPRGSVLCHPGTFSPTKSAEVF
                     VEYLPLVPKPLRNRGQISFHAGTFSCVGRILLYGQAEIPPGGSGYGRVLLSEETVLSG
                     GDRFILRGFSPLANFGYTIGGGAVLHPKPPARRGAGKAIPEALRRLRSGDPAERVLAA
                     VEDAGQAGVTPVDAAIVAGIGAERTRGALK"
     gene            1412..>1545
                     /locus_tag="VK429_00575"
     CDS             1412..>1545
                     /locus_tag="VK429_00575"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HLN90332.1"
                     /translation="MEESIDLHAFSPRDVASVVEEYIEAAARKRYREVRVIHGKGTGA
                     "
BASE COUNT          234 a          565 c          523 g          223 t
ORIGIN      
        1 ccttcagggc tccgcgggtc cgctccgccc cgatcccggc gacgatcgcc gcgtccacag
       61 gagtgacgcc agcctggccg gcatcctcca ccgcggccag gacccgctcc gcggggtctc
      121 ccgagcgcag ccggcgaaga gcctccggga tcgccttccc cgcccccctg cgggcggggg
      181 gcttcggatg cagcacggcc ccgccgccga tcgtgtatcc gaaattcgcc agcggggaga
      241 atccgcgcag gatgaaccgg tcgccccccg agaggaccgt ctcctcggag aggagcaccc
      301 ggccgtaccc ggagcccccg ggcgggatct cggcctgccc gtagaggagg atcctcccga
      361 cgcaggagaa ggtccccgcg tggaaggaga tctggccccg gttgcgcagc ggcttgggga
      421 ccagcggaag gtactcgacg aaaacttccg cggacttcgt gggggagaac gtcccggggt
      481 ggcacaggac cgacccacgg ggagcgctct ccttctccat cccctgcagg ttgaccgcgg
      541 tgcgggtccc cgcggacgat cgttccaccg ggccgccgtg gacctgcagc ccgcggacct
      601 tcgcgaccga ccccccgggg aggatcgcca cctcctcgcc ggttgcgacc gtcccgccga
      661 ccacggttcc ggtgaccacg gtgccgaacc ccttcatcga aaaggagcgg tccacgggga
      721 ggcggaacag gttcgacgcg tccttccccg ggatcccggc ggcgatccgg tcgatggcgg
      781 aaaccagttc ggggaggccc tcgcccgtga cggcggaaac ccggacgatc ggggccccct
      841 cgaggaacgt tccccggacg agcgcgtgga tctcctcctc ctggaggtcc atccactcgc
      901 tctccgcctt gtcgcacttg ttgaggacga cgatcccgtg gcgcaccgcg agaagccggc
      961 agatgtcgag atgctcgcgc gtctgcggca tcactccctc gtccgcggcc acgacgagca
     1021 gtacgatgtc gacccccgcc gccccggcta ccatcgtccg gacgaaccgc tcgtgtcccg
     1081 gcacgtcgac gatgccggcc agggctcccg acgggaggga gagacgggcg aacccgagct
     1141 cgatcgtgat cccccgctcc ttctcctcct tcagccggtc ggggtcggtg ccggtcagcg
     1201 cgcgcacaag ggaactcttc ccgtggtcga tgtgcccggc cgtcccgagg atcacggttt
     1261 tcgacatgag aggtatctta tcgcagtcgg tcggttgcgg taccatgtcg ggcatggacg
     1321 actattccgg gaagcgtcgg gttcccgctt cgacccaccg gccgtgacgc gaccggatct
     1381 ccccggggac ccccccccgc accccgttcc ggtggaggag agcatcgacc ttcacgcctt
     1441 ctcgccccgg gatgtggcct ccgtcgtgga ggagtacatc gaagcggcgg cgcggaaacg
     1501 gtaccgggag gtgcgcgtga tccacgggaa ggggacggga gccca
//
LOCUS       DATGYW010000046         1792 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_325397, whole genome shotgun sequence.
ACCESSION   DATGYW010000046 DATGYW010000000
VERSION     DATGYW010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_325397"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..775
                     /locus_tag="VK429_00580"
     CDS             <1..775
                     /locus_tag="VK429_00580"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HLN90333.1"
                     /translation="FSGGRIVDVQPDRRESKSLLGTMLRDAGYLTDVELRRILSSRGP
                     GGKKIGELLIERGKISKEVLARYLLLQVKECLFDVLTLREGEFRFEGFVVRAAAWVGE
                     PIRPDVLLMEGMQYLDEYHRYREIFPSGYFRIARKRGERADPYAFSEVERILWKALDF
                     SDDPERVYRKACLTGFEGIKGLAALLDRGLIEVTATKPVAGVDPARRPRNEIAFRRRF
                     DAIRMALWGAASAAAAVWVFRGLLSRGAFRTFAAWVDFF"
     gene            793..1767
                     /locus_tag="VK429_00585"
     CDS             793..1767
                     /locus_tag="VK429_00585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006425553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HLN90334.1"
                     /translation="MDDAREETIRFDEPSVLRDLFGVNDAHVRALERALGVTIRPGAN
                     EARIAGDAIPVELAGKVLSGLYRVLRRGIPVTGNDVEAAIRIVSADRNADVSEVFEDV
                     VFKSSRNRTITPKSVAQKRYLDAIREFDIVFGVGPAGTGKTFLAMAMAVGYLLRKEVK
                     RIVLVRPAVEAGERLGFLPGDMAEKVNPYLRPLHDALYTMLEFEQAAKLMERGTIEVA
                     PLAFMRGRTLNDSFVILDEAQNTTSEQMKMFLTRIGFGSRAVITGDITQTDLPSGKVS
                     GLNEAIAILGGVEGIRFCRFTEIDVVRHPIVQEIIKAYERFEKRDPEQ"
BASE COUNT          298 a          536 c          651 g          307 t
ORIGIN      
        1 cttctccggg ggaaggatcg tcgacgtcca gcccgatcgc cgggaatcga aatccctcct
       61 cggcacgatg ctccgggacg ccgggtacct gaccgacgta gagctcaggc ggatcctctc
      121 ttcgcgggga ccgggcggga agaagatcgg cgaactcctg atcgagaggg ggaagatctc
      181 gaaggaggtc ctcgcccggt acctcctcct gcaggtcaag gagtgcctct tcgacgttct
      241 cacgctccgc gagggggagt ttcggttcga ggggttcgtc gtgcgtgccg cggcgtgggt
      301 cggggaaccg attcgcccgg atgtcctcct catggagggg atgcaatacc tcgatgaata
      361 ccatcgatat cgcgaaatat ttccctccgg atattttcgg attgcgcgga agagggggga
      421 gcgggccgac ccgtacgcct tctccgaagt ggaaaggatt ttgtggaagg ccctcgactt
      481 ctcggacgac cccgagcggg tctacaggaa ggcgtgtctc accggattcg aggggatcaa
      541 ggggctggcc gctctcctcg accgggggct gatcgaggtc accgcgacga agcccgtggc
      601 cggggtcgat cccgcccggc gtccgcgcaa cgagatcgcg ttccgccgcc ggttcgacgc
      661 gatccggatg gcgctgtggg gcgccgcgtc ggcggcggcg gccgtgtggg tcttccgggg
      721 gctcctctcc cggggggcgt tccggacctt cgcggcgtgg gtcgatttct tctgatgcgg
      781 gaggcgggag cggtggacga tgcgagggaa gaaacgatcc ggttcgacga gccttccgtc
      841 ctgcgggacc tcttcggggt gaacgacgcc cacgtgaggg cgctcgaacg ggcgctggga
      901 gtgacgatcc ggcccggcgc caacgaggcg cgcatcgcgg gggacgcgat cccggtggag
      961 ctggcgggga aggtcctgtc cggtctgtac cgggtgcttc ggcgaggcat cccggtcacc
     1021 gggaacgatg ttgaggctgc gatccgcatc gtctctgccg acaggaacgc cgatgtgtcc
     1081 gaggtgttcg aggacgtggt gttcaagtcg tcgcggaacc ggacgatcac ccccaagagc
     1141 gttgcgcaga agcggtacct cgacgccatc cgcgagttcg acatcgtctt cggcgtcggc
     1201 cccgccggga cggggaaaac gtttctcgcg atggcgatgg cggtcgggta cctcctgcgc
     1261 aaggaggtga agcggatcgt cctggtccgg cccgcggtgg aggcggggga gcggctcggc
     1321 ttcctcccag gggatatggc ggaaaaggtg aacccgtacc ttcgccccct gcacgacgcg
     1381 ctctacacca tgctcgagtt cgagcaggcg gcgaagctca tggagcgggg aacgatcgag
     1441 gtggccccgc tggccttcat gcggggccgc accctgaacg actccttcgt catcctcgac
     1501 gaggcgcaga acacgacctc ggagcagatg aagatgttcc tcacccggat cggcttcggt
     1561 tcccgggcgg tgatcacggg ggacatcacg cagacggatc ttccgtcggg aaaggtttcg
     1621 gggctgaacg aggcgatcgc catcctcggc ggagtggagg ggatccggtt ctgccggttt
     1681 acggaaatcg acgtggtgcg gcaccccatc gtccaggaga tcatcaaggc gtatgagcga
     1741 ttcgaaaaac gcgacccgga gcagtagccg cccgccggag aacggggcgt cg
//
LOCUS       DATGYW010000047         5257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_378577, whole genome shotgun sequence.
ACCESSION   DATGYW010000047 DATGYW010000000
VERSION     DATGYW010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 5257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5257
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378577"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1464)
                     /gene="lepA"
                     /locus_tag="VK429_00590"
     CDS             complement(<1..1464)
                     /gene="lepA"
                     /locus_tag="VK429_00590"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012648357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HLN90335.1"
                     /translation="MRIENIRNFSIIAHIDHGKSTLADRLLELTGTLSDREKVDQFLD
                     KMDLERERGITIKAQTVRMRHRAEDGKEYILNLIDTPGHVDFSYEVSRSLSACEGAIL
                     VVDASQGVEAQTLANVYMALDLNLEVIPVLNKIDLPNAETERVRREIEDVIGLDTSGI
                     LAVSAKKGTGVPELLEQVIKVIPPPEGDPDAPTKALIIDSWFDNYAGVVVLARVLDGS
                     IRSGQRVTFMATGNSFEVQKVGVFSPHPKELQALGTGEVGFVIANIKELTETKVGDTI
                     TDTRHPAASPLPGFKVVRPMVFAGVYPLASDQYPQLRTAIDKLRLNDASFTAEPESSV
                     ALGFGFRCGFLGLLHMEIVQERLEREYSVELITTAPTVGYRAVKIDGTVLEVDSPARL
                     PEPLELDHIEEPVIHATIHLPAEYLGNVLKLCEDRRGVQRRMKFVSAARVILEYELPL
                     NEIVLDFYDKLKTASRGYASMDYDFLRFQPSSLVRLDI"
     gene            complement(1467..2405)
                     /locus_tag="VK429_00595"
     CDS             complement(1467..2405)
                     /locus_tag="VK429_00595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014560856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLN90336.1"
                     /translation="MRIMVTGGAGFIASHVAQAYVEAGHEVLVLDNLSSGKKENVPEG
                     ARFVFGEAGSETAVEAIRTFRPEVLCHHAAQINVRKSVADPVFDAKENIVSTLVLLEA
                     AREHGVRKVLFSSSGGAGYGEQEYFPADEKHPLRPISPYGVAKVSVELYLHYYRVQYG
                     LEYTALRYSNVYGPRQDPHGEAGVVAIFCERLLKGQTALVNGDGLQTRDYVYVGDVVR
                     ANLAALSRGDGLSINIGTGIETDVNTLFRTLRDLAGSRQEEIHGPPMPGEQRRSVIEN
                     GMAFNELGWYPDVSLDKGLALTLAYFRDKVKSSGTR"
     gene            complement(2449..4599)
                     /gene="lptD"
                     /locus_tag="VK429_00600"
     CDS             complement(2449..4599)
                     /gene="lptD"
                     /locus_tag="VK429_00600"
                     /inference="COORDINATES: protein motif:HMM:NF016348.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0010033 - response to organic substance
                     [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HLN90337.1"
                     /translation="MNRFHRAVVGLLLLVAGVVDVSAEARFPNPSTMKELSKRGIRLD
                     APVHMTADTISYDEETGVAVAEGNVELVLGTRTMRADRIRYDSATGEADLSGKVRYKD
                     AGEEFAFDRITINLDSETGVLYNGTILISSSNFLIASGKIEKTGKSSFLVEKGSMTTC
                     PCDPEPDWKFEVNRARVTLEKYAVGNDITFRVRGVPVFWLPWGAFPVKTTRQSGLLLP
                     TFSSNSSRGYTLQVPYYQVINRWSDATVTLDAMSHRGYRPEVEYRFVLNPESEGALRA
                     TYFRDREEQENRGRFYGENVFRSGSFTANAVLEVPTDPRYYLDLVDNTALLAARFARS
                     EGFVSTTGRHSEHALSILWNKDLQEIPGPDNTAQVVPDYTMTLLPVELPIAGIDLSGA
                     ISATRFQRGDGHDELRARGFGEVSRAIPMYRSVTLVPYLFADVLGTRFEPSPGEGPSD
                     RGRFVPGGGATLSADARGDSPGKSLVHSAGVSAGYRYVPRISQDDLPVTDRWSRLAPQ
                     SQFLFTLSQRLLGVREGAPPKEFLSFHIEWAYDLGGNESSGSPYVDPLAPYVRTLRDQ
                     IDTGAGRPPRKNNASSDIYAKVGLTPIERWRFQGEALFDPVESIFTVAAVGAEYRKDD
                     DHRFLAAYRLSRDLAEDVRGDFAWRLLHWLRLQAQGDYSLRNGYLTEGTVGASVFPRS
                     DCWNVGFTVQRKTQPDDTTVRVSFGLKGIGSVAH"
     gene            complement(4596..>5257)
                     /locus_tag="VK429_00605"
     CDS             complement(4596..>5257)
                     /locus_tag="VK429_00605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90338.1"
                     /translation="TWELGRTFDWREGQDGTIAVALPGLDLDRLRVGRIGGFQRDNAA
                     IALAASWLLASGEEIGPAAFAAAATSALPGSRWPGRWCRLPLRKNAGTWVDGGHNPEA
                     AAAMAREISGGAPWGDGKRLIALWSMLSDKDATGYLRSLRQHFDGIVTYPLSHPRGAG
                     REALGEACAKLGIAFRLAGNFPEGWRIARRWAGKGGVVLVCGSLAAAGDAYRHRVGFV
                     A"
BASE COUNT          910 a         1768 c         1631 g          948 t
ORIGIN      
        1 gatgtcgagc cggacaaggc tggacggctg aaaccggaga aagtcgtaat ccatcgaggc
       61 gtacccgcgg gaggcggtct tgagcttgtc gtagaaatcg aggacgatct cgttcagggg
      121 cagctcgtac tccaggatga cgcgtgccgc cgagacgaac ttcatccgcc gctgcacacc
      181 ccgccgatcc tcgcacagct tgaggacatt tcccaggtat tccgccggca ggtggatcgt
      241 cgcgtggatg accggctcct cgatatggtc cagctcgagt ggctccggga gccgcgcggg
      301 gctgtcgacc tcgaggaccg ttccgtcgat cttcaccgcg cggtacccga cggtgggcgc
      361 cgtcgtgatc agctccacgc tgtattcgcg ctccaggcgc tcctggacga tctccatgtg
      421 aagcagaccg agaaatccgc accggaagcc gaatcccagc gcaacggagc tttccggctc
      481 cgcggtgaac gaggcgtcgt tcagccggag cttgtcgatc gccgtccgca gctggggata
      541 ctggtcggag gcgagcgggt agacccccgc gaacaccatc ggccggacga ccttgaaccc
      601 cgggagcggg ctggcggcgg gatggcgcgt gtcggtgatc gtgtcgccca ccttcgtctc
      661 ggtcagctcc ttgatgttgg cgatcacgaa accgacttcc ccggtcccaa gcgcctgcag
      721 ctccttcggg tggggagaga agacgccgac cttctgcacc tcgaacgaat tccccgtcgc
      781 catgaaggtt acccgctggc cggaccggat cgagccgtcc agtacccggg cgagaacgac
      841 cacgccggcg tagttgtcga accaggaatc gatgatcagc gccttggtcg gggcgtccgg
      901 atccccctcg gggggaggaa tcaccttgat cacctgttcc agaagctccg ggacgccggt
      961 ccccttcttc gcgctgaccg caaggatccc cgaggtatcg aggccgatga cgtcttcgat
     1021 ctcccgtcgc acccgttcgg tctccgcgtt cggaaggtcg atcttgttca ggacggggat
     1081 gacctcgagg ttcagatcga gggccatgta gacgttggcc agcgtctggg cctcgacgcc
     1141 ctgcgaggcg tccacgacga ggatcgcccc ttcgcaggcg ctcaggctgc gggacacctc
     1201 ataggagaag tcgacatggc cgggggtgtc gatcaggttg aggatgtact ccttcccgtc
     1261 ctccgcgcga tggcgcatcc ggacggtctg ggccttgatc gtgatcccgc gctcccgctc
     1321 gaggtccatc ttgtccagga actggtcgac cttctcccgg tccgaaaggg ttccggtaag
     1381 ctcgaggagc cggtcggcca gggtggactt cccgtggtcg atgtgggcga tgatggagaa
     1441 attgcggatg ttctctattc gcatgtctac cgcgttccgg aagatttcac cttgtctcgg
     1501 aagtacgcca gcgtgagggc gagcccttta tccaacgaca catcaggata ccacccaagt
     1561 tcgttgaagg ccatcccgtt ttcgatgacc gaccggcgct gctcccccgg catcggaggc
     1621 ccgtggatct cctcctgccg gctcccggcg aggtcccgca gcgtccggaa cagggtgttc
     1681 acgtcggttt cgatcccggt gccgatgttg atggagagcc cgtccccgcg ggagagggcc
     1741 gcgagattgg cgcgcacgac atcccccacg tacacgtaat cgcgggtctg caatccgtcg
     1801 ccgttgacga gggcggtctg ccccttcagc agccgttcgc agaagatggc gaccacgccc
     1861 gcctctccgt ggggatcctg tcgcggcccg tacacgttcg agtaccgcaa cgctgtgtat
     1921 tccagcccgt actggacacg gtagtaatgg agatagagtt ccacggagac cttcgccacc
     1981 ccataggggg aaatgggccg caacgggtgc ttttcgtccg cggggaagta ctcctgttcg
     2041 ccgtacccgg cacctccgga ggaggagaag aggaccttgc ggaccccgtg ctcccgcgcc
     2101 gcctcgagaa ggacgagcgt gctcacgatg ttctccttcg catcgaagac gggatcggcc
     2161 acggactttc gcacgttgat ctgcgcggcg tggtggcaga gtacctccgg ccggaaggtt
     2221 cggatcgcct cgacggcggt ttccgatccc gcttccccga agacgaatcg ggcaccctcg
     2281 gggacgttct ccttcttccc cgaggaaagg ttgtccagca cgaggacctc gtgtcccgct
     2341 tccacgtacg cctgcgcgac atgcgaggcg atgaatcccg ctcccccggt gaccatgatc
     2401 cgcatcccga ttctcctctc cgcctcgata ttgttcattc ccgtcccttc agtgcgctac
     2461 ggaaccgatt cccttgagcc cgaacgacac cctcacggtc gtgtcgtccg gctgtgtttt
     2521 ccgctggacg gtgaatccga cgttccagca gtcgcttcgc ggaaacacgg atgcccccac
     2581 ggttccctcg gtgagatagc cgttcctcaa ggagtagtcc ccctgcgcct gcaggcggag
     2641 ccaatgcagc aggcgccacg cgaagtcccc ccgcacgtct tccgccagat ccctggaaag
     2701 gcgatacgcg gcgaggaacc gatgatcgtc gtccttcctg tactccgcgc cgaccgcggc
     2761 gaccgtgaaa atggactcca ccggatcgaa gagcgcctcc ccctggaaac gccaccgctc
     2821 gatgggagtc aacccgacct ttgcgtagat gtccgaggag gcgttgttct tcctcggagg
     2881 acgacctgct cccgtgtcga tctgatcccg caacgtccgc acgtaagggg cgagcggatc
     2941 gacgtacgga ctcccggacg actcattccc cccaagatcg taggcccact cgatgtggaa
     3001 cgacaggaac tccttcggcg gggcgccttc cctcaccccg agcagacgct gcgaaagagt
     3061 gaagagaaac tggctttggg gcgccagccg cgaccaacgg tcggtgacgg gaagatcgtc
     3121 ctggctgatc ctgggaacgt agcggtatcc cgccgatact ccggccgagt ggacgagaga
     3181 ctttccgggg gaatcgccgc gggcatccgc cgagagggtc gcaccacctc cgggcacgaa
     3241 gcgcccgcga tcggacggac cttcccccgg agacggctcg aaccgggtcc cgagaacgtc
     3301 cgcaaagagg tacggcacca gggtgacgga acggtacatg ggaatcgccc gtgagacctc
     3361 cccgaacccc ctcgcgcgaa gttcgtcgtg gccatccccg cgctggaacc gggttgcgga
     3421 gatggctccg gaaagatcga tccccgcaat cgggagctct acaggcagga gcgtcatggt
     3481 gtagtccggc accacttgcg cggtattgtc cggccccgga atctcctgaa ggtccttgtt
     3541 ccaaaggatc gagagcgcgt gttccgagtg ccgccccgtg gtggagacga acccttccga
     3601 ccgggcgaag cgcgccgcca ggagcgcggt attgtcgacc aggtcgaggt aataccgggg
     3661 atcggtgggc acttccagaa ccgcgttcgc ggtgaaggaa ccggaacgga aaacgttttc
     3721 cccgtaaaac cgccccctgt tctcctgttc ctcccggtcc cggaaatacg tcgcccggag
     3781 cgccccttcc gattcgggat tcagtacgaa cctatattcg acttccggac ggtatccgcg
     3841 atggctcatc gcatcgagcg tcacggtggc gtcgctccag cgattgatca cctggtagta
     3901 cggcacctgc agcgtatatc ccctggagct gttggaggaa aaggtcggga gcaggagtcc
     3961 gctctgccgc gtcgtcttga cgggaaacgc tccccacggc agccaaaata ctgggactcc
     4021 acggacacgg aacgtgatgt cattcccgac cgcgtacttt tcgagagtga cccgcgcccg
     4081 gttcacttcg aacttccaat ccggctcggg gtcgcacggg catgtggtca tgctcccctt
     4141 ttcgaccagg aacgaactct tccctgtctt ttcgatcttt ccgctcgcga tcaggaaatt
     4201 gctgctgctg atcaggatgg tgccgttata gaggaccccc gtctccgaat cgaggttgat
     4261 cgtgatcctg tcgaacgcga actcctctcc cgcgtctttg taccgcacct tcccggaaag
     4321 gtccgcctcc cccgtcgccg aatcgtaccg gatccggtcg gcgcgcatcg tccgcgttcc
     4381 caacaccagt tcgacgttcc cctccgccac ggcgaccccg gtctcctcgt cgtaagaaat
     4441 cgtgtcggcg gtcatgtgaa ccggggcgtc gagacggatc ccccgtttcg agagctcctt
     4501 catggtggag ggattgggaa accgtgcctc cgcggagacg tccacgacgc ccgcgacgag
     4561 cagcaggaga ccaacgacgg cgcgatggaa ccggttcacg ccacgaaacc gacgcgatgc
     4621 cggtaagcgt cccccgcggc ggcgagcgag ccgcacacga gcacgacgcc gcccttcccg
     4681 gcccagcggc gggcgatcct ccatccttcc gggaagtttc ccgcgaggcg gaaggcgatc
     4741 cccagtttcg cgcacgcttc cccgagcgcc tcccttcccg caccgcgcgg gtgcgagagc
     4801 ggatacgtca cgatcccgtc gaagtgctgc cggaggctcc gcaggtaccc cgttgcgtcc
     4861 ttgtcggaaa gcatgctcca taaggcgatc agccttttcc cgtcgcccca tggggccccc
     4921 cccgagattt cgcgcgccat cgcggccgcc gcctccgggt tgtgtccccc gtcgacccac
     4981 gtgccggcgt ttttccggag tgggagccgg caccaccggc cgggccatcg ggagcccggg
     5041 agcgccgatg ttgccgccgc ggcgaatgcg gcgggaccga tctcctcgcc ggacgcgagt
     5101 agccacgagg cggcaagcgc gatcgcggcg ttatcgcgct ggaacccgcc gatccttccc
     5161 acccgcaacc gatcgagatc gaggccgggg agcgccaccg cgatcgtccc gtcctgaccc
     5221 tccctccagt cgaaggtccg gccgagttcc catgtgt
//
LOCUS       DATGYW010000048         2139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_111624, whole genome shotgun sequence.
ACCESSION   DATGYW010000048 DATGYW010000000
VERSION     DATGYW010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111624"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2036)
                     /locus_tag="VK429_00610"
     CDS             complement(<1..2036)
                     /locus_tag="VK429_00610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90339.1"
                     /translation="MPGTLLFRKAPPGEQLAVVFLVGETPTQGVQREAMTSALNAIFK
                     YPEKLLPCVQLDKSPDIRILGPYFSGSNDSLHHLLWAWNQAQEKENRKEIEIISGSAT
                     LDDNRKELTSDQENVSFHATVVPDGALTRTFYYKFLWGRLHASGRRDVALFVEGGTAY
                     GSGYKERSKETSGPNRRSARWADPPGPSDTDVRLVVRFPLHVSQLRGAYEKENALQNP
                     APIGQTPRHALELALEAPEATYPDIVPAQDLRMTANIADLALTNGVETIRREGIRFVG
                     IAASDPRDILFLARRIRESEANVTLFTFGSDILYTHPDYQRYLRGMLVVTPYPLFSPN
                     QRWTGARATRISFPGSSEQGIYNAVLALLHDSKVHPGRLLEYRAPLTEGPPRLPIWVM
                     AVGRHGFWPVWFTSTYQDEGYVYTPLEALPAALGPRPDRDHLPSGALLSFVLIETFFL
                     LMMFLYTWTRVRWSNKNQRLSERMQRLAHLIRSANRRVEILFSMWSDRTARGIHKMYL
                     FVLFLLFGLVQATLIVYVFAVRRFIVESAIALGFTITLLALLLLALLVAASREYIAYY
                     RQGRRKYRCALVLVFSLTAALPLAIYLADVLRMPLEETLAFYGRSFDFASTLSPAIPF
                     LFGLAVVCLWAGANIGRGFYIEVYGIFQPPGEWRLKSLEGLRPLRSSIRNLLDDP"
BASE COUNT          446 a          589 c          701 g          403 t
ORIGIN      
        1 gggtcatcca ggaggtttcg gatggaggat ctgagaggcc tcagtccctc caggctcttc
       61 agacgccatt cccccggcgg ttggaagatg ccgtagacct cgatgtaaaa accgcgtccg
      121 atattggcgc ccgcccagag gcagacaacc gcgagcccga acaggaaagg aatagccggg
      181 ctcaaagtgc ttgcaaaatc gaaagatcgc ccgtaaaagg cgagggtctc ctcgagaggc
      241 atccggagaa cgtccgcaag atatatcgcc aacgggaggg cggccgtcaa gctgaagacg
      301 agcacgagcg cgcaccggta cttcctccgc ccctggcggt agtacgcgat gtattcccgc
      361 gatgcggcga cgaggagggc gagcaggaga agggctaata gcgtgatcgt aaagccgagc
      421 gcgatggcgc tttccacaat gaagcggcgc accgcaaaca cgtagacgat caaggtcgct
      481 tgaacgagcc cgaagagaag gaaaaggacg aacaggtaca tcttgtggat cccgcgggcc
      541 gtacgatcgc tccacatcga gaagagaatt tcgacgcggc ggttggcact tcggatgagg
      601 tgcgccagcc tctgcatgcg ttcggatagt cgttgattct tattcgacca acgcacccgc
      661 gtccaggtgt aaagaaacat catcaggagg aagaaggtct cgatgaggac aaaagacaac
      721 aaggcgccgg acgggagatg gtcgcggtcc ggacggggac ccaacgccgc cggaagtgcc
      781 tcgagaggtg tatagacata tccttcgtct tgataagtcg aggtgaacca gacaggccag
      841 aacccgtggc gccccacggc catgacccag attggcagcc gcggcggccc ttcggtcagc
      901 ggcgcgcggt attcgagcag ccgacccggg tggaccttgg agtcgtgaag gagggccagg
      961 acagcgttgt agattccctg ctcgctggat cccggaaacg agatccgagt agctctggcg
     1021 cctgtccacc gctgattcgg cgaaaagagg ggatagggag tcacgaccag catgcctcgg
     1081 aggtatctct ggtagtcggg atgggtgtag agaatgtccg agccgaatgt gaagagtgtc
     1141 acgttggctt cggattctcg gatcctgcgg gcgagaaaaa ggatgtcccg aggatcggac
     1201 gcagcgatcc ccacgaagcg aatcccttcc cggcgaatag tctcgacgcc attcgtgagc
     1261 gcaaggtcgg cgatgtttgc cgtcatgcgc aggtcctgtg ctggcacgat atccggatac
     1321 gtggcctcgg gggcctcgag cgcaagctcc agcgcatgac ggggcgtttg accgatcggc
     1381 gccggattct gtaacgcgtt ttccttttcg tacgcccctc gaagctgaga cacgtgcagg
     1441 ggaaacctca cgacgaggcg gacatcggtg tctgaaggac ccggaggatc tgcccacctt
     1501 gcggaccggc ggttaggacc ggacgtctcc ttggatctct ccttgtatcc gctgccgtag
     1561 gctgttcctc cctcgacgaa gagggcgaca tccctcctcc cgctggcgtg caggcgcccc
     1621 cagaggaact tgtagtagaa cgtcctggtc agagcgccgt cgggcacgac ggtggcatga
     1681 aaggatacat tttcttgatc ggaggttagc tctttgcggt tgtcgtcgag tgtcgcggag
     1741 ccagagataa tctcgatctc tttcctgttc tctttttctt gggcctggtt ccaggcccag
     1801 agaagatggt gtagcgagtc gttcgagccg gagaagtagg ggccgaggat gcggatgtcg
     1861 gggctcttat cgagttggac gcaaggcagt agcttttccg ggtatttgaa tatggcgttg
     1921 agtgcgcttg tcatcgcttc ccgctggact ccctgcgtcg gcgtctcacc gaccaggaac
     1981 acgacggcga gttgttcgcc gggcggcgct ttgcggaaga ggagtgtgcc cggcatgctc
     2041 cggtgaaggc gggggctgac tgaccgcggg tttacagaca ggaacgcctc cggtacgttc
     2101 tccggcggac ggcctacggt ccaacgtgtt tcaccactt
//
LOCUS       DATGYW010000049         3954 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_57975, whole genome shotgun sequence.
ACCESSION   DATGYW010000049 DATGYW010000000
VERSION     DATGYW010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3954
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57975"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1478)
                     /locus_tag="VK429_00615"
     CDS             complement(<1..1478)
                     /locus_tag="VK429_00615"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011423352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HLN90340.1"
                     /translation="MAALVLVLLATAANASEAELVIPDLAKVNFLGMNGHNLLLWGLL
                     ICVLGIGFSLVQFSQIRNLPVHKSMLEISELIWETCKTYLIQQGKFLAILWVFIAAIM
                     VWYFSRTMDTFKVGVIVIFSIVGILGSYSVAWFGIRMNTYANSRTAFAGLKGKPYPTM
                     EIPLKAGMSIGMLLIAVELVLMLFILLFVPGELAGPCFIGFAIGESLGAAALRIAGGI
                     FTKIADIGSDLMKIVFKIKEDDARNPGVIADCTGDNAGDSVGPTADGFETYGVTGVAL
                     ITFILLAVGHKLDPGAKENIQIQLLVWIFVMRIGMIVTSAVSYGINGVYNRGKYGESA
                     KFNFEHPLTSLIWLTSFVSIAMTYLLSYLLIPALGDGTLWWKLSTIITCGTLAGAIIP
                     ELVKIFTSTNSGHVREVVTASREGGASLNILSGLVAGNFAAYWLGLAIISLMAGGYAV
                     STLGLGDIMVAPAIFAFGLIAFGFLGMGPVTIAVDSYGPVTD"
     gene            1715..2617
                     /locus_tag="VK429_00620"
     CDS             1715..2617
                     /locus_tag="VK429_00620"
                     /inference="COORDINATES: protein motif:HMM:NF013380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HLN90341.1"
                     /translation="MDFRGKLILAPLAGVTDTTFRRLCRENGADIVVTEMVSARGLLC
                     DPIRSGRYLAYDEAERPVGAQLFGSVPCEIAEAAAEVARRGFDFVDINMGCPVRKVTG
                     GGSGAAILSNPRLAGEIARAAVRATGIPVTAKIRSGFGTEKETYLAVAEELFAAGVAA
                     VTLHPRHRGQMFAGSADWTQIAALKRAFPGETIIGNGDVRAPGDAARMLDETGCDSVM
                     IGRAAMGNPWIFGPFPTPEARRALILRHGEEMFRRHGAHGIKEMRKHLAWYSRGIQGA
                     AAFRSELPKVADPDSFRAVVGRFF"
     gene            2614..3735
                     /locus_tag="VK429_00625"
     CDS             2614..3735
                     /locus_tag="VK429_00625"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN90342.1"
                     /translation="MSDLLRQTLESVNIGILVFDVAGKLAYINPAAEEILQGSSQALA
                     GKHFRTVFRGSPEVVRIVRKAIEENTPVTGFDVALKPAGTGQAVQRRGAASIPVMLGA
                     SPLSGPSGDPQGAVLSVKSSEILSLVGQEERAAVRAEEMQMLAYGIAHEIKNPLGGIL
                     GAAQWILRGESPDEDRAEGVRLILREARRINDLVEKMLEMGKTPPPPRPFALLPLLRE
                     AEQLLLSEARAQGKEVRFDLRIDPSLPPISGHPDTVYRALLNILKNAVEAIERAGTVG
                     IEARMNVNYRFARGRGRKRSFLEVEITDSGKGMTEEELRKALLPFYTTKARGTGLGLV
                     MARQAVTRVGGKMEIRSSPGAGTAVLLSLPVDPGRKAAT"
     gene            3732..>3954
                     /locus_tag="VK429_00630"
     CDS             3732..>3954
                     /locus_tag="VK429_00630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020675420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLN90343.1"
                     /translation="MRRILIADDDESIRWVLRKTVTGLGFAADLAEDGEQALALLRKN
                     TYAAAFVDIRMPGVEGIEVLERVQARKSPT"
BASE COUNT          709 a         1289 c         1354 g          602 t
ORIGIN      
        1 ttgtcggtca ccgggccgta cgagtcgacg gcgatcgtga ccggccccat cccgaggaag
       61 ccgaaggcga tcagcccgaa ggcgaagatc gccggggcca ccatgatgtc gcccagcccc
      121 agcgtggaga cggcgtagcc gcccgccatc agggagatga tcgcaagccc cagccagtag
      181 gcggcgaagt tcccggccac cagtccggag agaatgttga gagacgcgcc gccctcgcgg
      241 gaggccgtga ccacctcgcg gacgtggccc gagttcgtag aggtgaagat cttgaccagc
      301 tcggggatga tcgcccccgc cagggtcccg cacgtgatga tcgtggagag cttccaccag
      361 agcgtcccgt cgcccagcgc cgggatcagc aggtacgaga ggaggtacgt catcgcgatg
      421 gagacgaacg aggtgagcca gatgagggag gtcagcgggt gctcgaagtt gaacttggcc
      481 gactcaccgt acttcccccg gttgtagacg ccgttgatcc cgtaggagac ggcgctcgtc
      541 acgatcatcc cgatgcgcat cacgaagatc cagaccagga gctggatctg gatgttctcc
      601 ttcgctccgg ggtcgagctt gtgcccgacc gcgagcagga tgaaggtgat gagggccacg
      661 cccgtgacgc cgtacgtttc gaacccgtcc gccgtggggc cgaccgagtc gcccgcgttg
      721 tcccccgtgc agtcggcgat gacgccgggg ttccgcgcat cgtcctcctt gatcttgaag
      781 acgatcttca tcaggtccga cccgatgtcg gcgatcttgg tgaagatccc gcccgcgatt
      841 ctcagcgccg cggcgcccag cgactcgccg atcgcgaaac cgatgaagca ggggccggca
      901 agctcccccg ggacgaagag aaggatgaag agcatgagga ccagctcgac cgcgatcagg
      961 agcatcccga tgctcatccc ggccttcagc gggatctcca tcgtcgggta cggcttcccc
     1021 ttcagccccg cgaatgcggt gcgggagttg gcgtacgtat tcatccggat cccgaaccac
     1081 gcaacggagt agctgccgag gatgccgacg atgctgaaaa tgacgatgac cccgaccttg
     1141 aaggtatcca tcgtccggct gaagtaccag accatgatcg cggcgatgaa gacccacagg
     1201 atggcgagga acttcccctg ctggatcagg tacgtcttgc acgtctccca gatcagctcg
     1261 gagatctcta acatcgactt gtggaccggc aggttacgga tctgggagaa ctggacgagg
     1321 ctgaagccga tgcccaggac gcagatcagg agcccccaca gcagcaggtt atgcccgttc
     1381 atcccgagga agttcacctt ggccaggtcg gggatcacca gctccgcctc gctcgcgttg
     1441 gccgcggtgg ccagcaggac gagaaccagc gccgccatcg cggggaagag cttcctcgcg
     1501 agggcggtaa accgtgcgac aaacgtgtca gtcatggccc ctccgtatct gttctgttat
     1561 taacggatag tgcgtggcgg gagatccgcc ggaatcttcg tgaaatcggg cgggttggga
     1621 cacaatcgac aggaacccgc atccgaaacg cgcaatttgt accacgcgac gccccgcagg
     1681 tcaaggggaa agcccttggt ggtatagtag ccgcatggat ttccgtggga aactgatcct
     1741 cgcgccgctg gcgggggtga ccgacacgac gttccggcgc ctgtgcaggg agaacggcgc
     1801 cgacatcgtg gtgaccgaga tggtgtcggc cagggggctc ctctgcgacc ccatccggtc
     1861 cgggcggtat ctcgcctacg acgaggccga gcgccccgtg ggggcccagt tgttcggttc
     1921 cgtcccctgc gaaatcgccg aagccgcggc cgaggtcgcc cgtcgcgggt tcgacttcgt
     1981 ggacatcaac atggggtgtc ccgtacggaa ggtgaccggc ggcggctccg gggcggcgat
     2041 cctgtccaat ccgcgcctcg ccggggagat cgcccgtgcg gcggtccggg cgaccgggat
     2101 cccggtgacg gccaagatcc ggtcgggctt cgggacggag aaggagacgt acctcgcggt
     2161 ggccgaggag ctgttcgccg ccggcgtcgc cgccgtgacc ctgcatcccc gtcaccgggg
     2221 acagatgttc gccggaagcg cggactggac gcagatcgcc gccctgaagc gggcgttccc
     2281 cggggagacg atcatcggca acggggatgt ccgggcgccg ggggacgccg cccggatgct
     2341 cgacgaaacc ggctgcgaca gcgtgatgat cgggcgcgcc gccatgggaa acccctggat
     2401 cttcggcccg ttcccaaccc ccgaggcacg gcgcgccctg atcctgcggc acggcgagga
     2461 gatgttccgg cgccacgggg cgcacgggat caaggagatg cggaagcacc tcgcctggta
     2521 cagccggggg atccagggcg ccgccgcctt ccgctcggag ctgccgaagg tcgccgaccc
     2581 ggactccttc cgggcggtcg tcgggcgctt cttttgagcg atctcctccg gcagaccctg
     2641 gaatcggtca acatcgggat cctcgtcttc gacgtcgcgg ggaagctggc gtacatcaac
     2701 cccgccgcgg aagagatcct gcagggctcc tcccaggcgc tcgccggtaa acatttccgg
     2761 accgtcttcc ggggatcccc ggaggtggtc cggatcgtcc gcaaggcgat cgaggagaac
     2821 acgccggtca cgggcttcga cgtggcgttg aaaccggcgg ggacggggca ggcggttcag
     2881 cgccgagggg ccgcttccat cccggtgatg ctcggagcct ccccgctctc cggaccgtcc
     2941 ggcgacccgc agggggcggt actctccgtc aaatcgtccg agatcctgtc gctcgtcgga
     3001 caggaggagc gggcggcggt ccgcgccgag gagatgcaga tgctcgctta cggaatcgcc
     3061 cacgagatca agaaccccct gggcggcatc ctcggggcag cacagtggat cctgcgcggg
     3121 gaaagcccgg acgaggaccg cgccgagggg gtccggctga tcctgcgcga ggcgcgacgg
     3181 atcaacgacc tcgtggagaa gatgctcgag atggggaaaa ctccccctcc cccgcggccc
     3241 ttcgccctcc tccccctgct gcgcgaggcg gagcagctcc tcctctccga ggcccgcgca
     3301 cagggaaagg aggtccggtt cgatctccgc atcgacccga gcctcccccc gatctccgga
     3361 cacccggaca ccgtctaccg ggccctcctc aacattctga agaacgccgt cgaggcgatc
     3421 gagcgggccg gaaccgtcgg gatcgaggcg cggatgaacg tcaactaccg gttcgcccgg
     3481 ggccggggca gaaagcggtc gttcctggag gttgagatca ccgacagcgg gaaggggatg
     3541 accgaagagg aactgcgcaa ggcgctgctc cccttctaca ccacgaaggc tcgcggcacg
     3601 gggctcggcc tcgtgatggc ccggcaggcg gtgacgcggg tcggagggaa gatggagatc
     3661 cggtcttctc ccggcgccgg gaccgcggta ttactatccc ttccggtcga tccggggaga
     3721 aaggccgcga cgtgagacga atcctcatcg cagacgacga cgagagcatc cgctgggttc
     3781 tccggaagac cgtcaccggg ttggggttcg ccgcggacct cgccgaggac ggagagcagg
     3841 ccctcgccct cctgcgcaag aacacgtacg ccgccgcctt cgtggacatc cggatgcccg
     3901 gggtggaggg gatcgaggtg ctcgaacggg tccaggcgcg gaaatccccc accc
//
LOCUS       DATGYW010000050         2922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_432902, whole genome shotgun sequence.
ACCESSION   DATGYW010000050 DATGYW010000000
VERSION     DATGYW010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432902"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..2258)
                     /locus_tag="VK429_00635"
     CDS             complement(27..2258)
                     /locus_tag="VK429_00635"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012632990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HLN90344.1"
                     /translation="MTTGTAKIIWTKIDEAPALATYSLLPIIQAFTKGTGVSVETSDI
                     SLAGRIIANFPEYLTESQRIPDHMAKLGALALTPEANIIKLPNISATIPQLMAAIKEL
                     RAHGYNLPDYPEEPKTDAERALQAKYAKILGSAVNPVLRQGNSDRRAPLSVKQFSKKH
                     PHKMGAWTRDSKTHVAHMSGGDFYGSEKSTTVKKATEIRIEFVAGDGKVTVLKKKLEL
                     LEGEVIDATAMNVRALRKFYEEQIEEAKKSGVLLSLHLKATMMKISDPVMFGHAVSVY
                     YKDVFEKHAAVFKELGVNADYGMGDLYAKIKKLPEAKKAEIEADIQAVYKNRPALAMV
                     DSDKGITNLHVPSDIIVDASMPVVVRDSGKMWGPDGKLHETKAMIPDRCYATTYRTII
                     EDCKENGAFDPATIGSVPNVGLMAQKAEEYGSHDKTFLAPGNGTIRAVEASGQTLLEQ
                     KVEEGDIFRMCQTKDAPIRDWVKLAVKRARATGAVAVFWLDKNRAHDAQIIQKVDKYL
                     KDHDTKGMEFHILAPIEAMKFTLGRFRAGKDTISVTGNALRDYLTDLFPIIEVGTSAK
                     MLSIVPLLAGGGLFETGAGGSAPKHVQQFVKEGYLRWDSLGEFSALAASLEHLGNTFK
                     NEKALVLAETLDQAIGKFLDNNKSPARKVGQIDNRGSHYYLALYWAQALAAQTRDKEL
                     QARFAGVAKQLADNEAKINQELLAAQAKPMDIGGYYRPDPAKANAAMRPSPTLNAIIE
                     AMA"
     gene            complement(2312..2734)
                     /gene="ndk"
                     /locus_tag="VK429_00640"
     CDS             complement(2312..2734)
                     /gene="ndk"
                     /locus_tag="VK429_00640"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004180236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HLN90345.1"
                     /translation="MRPQRTLSIVKPDGVRKGVIGEVIRRFEASGIRVVAMRMLHLSK
                     KEAEGFYAVHRERPFFGSLTEFMSSGPIVVMVLEGENVIARNRLLMGATDPKKADRGT
                     IRADLADNVEQNIVHGSDAPETAATEIGYFFSELDIVS"
     gene            complement(2743..>2922)
                     /locus_tag="VK429_00645"
     CDS             complement(2743..>2922)
                     /locus_tag="VK429_00645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011025639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HLN90346.1"
                     /translation="GKAFVANIVALGAIAAITGQVTLEAVEKAVLSRVPKGTEELNKK
                     ALMAGYELARAKTNG"
BASE COUNT          446 a          968 c          836 g          672 t
ORIGIN      
        1 cgagtggttg cttcggtcgc tgcaccctac gccatcgctt cgatgatcgc gttcagcgtg
       61 gggctcgggc gcatcgccgc gttcgccttc gccggatcgg gccggtagta gccgccgata
      121 tccatgggct tcgcctgggc cgcgaggagc tcctggttga tcttcgcctc gttgtccgcc
      181 agttgcttcg ccacccccgc gaaacgcgcc tgcagctcct tgtccctggt ctgtgccgcc
      241 aacgcctgcg cccagtacaa cgcgaggtag tagtggcttc cccggttgtc gatctggccc
      301 accttgcggg cgggcgactt gttgttgtcg aggaacttgc cgatcgcctg gtccagcgtc
      361 tccgccagga cgagcgcctt ttcgttcttg aacgtgttcc ccaggtgttc cagggaggcc
      421 gcgagcgccg agaattcgcc gagggaatcc caccgcaggt acccttcctt cacgaactgc
      481 tggacgtgct tgggcgccga gccgccggct cccgtctcga acagcccgcc gcccgccaga
      541 agtggaacga tcgacagcat cttcgcgctg gtgcccactt cgatgatcgg aaacaggtcg
      601 gtcagataat cgcgtaacgc gttcccggtg acggaaatcg tgtctttccc tgccctgaac
      661 cttccgaggg tgaacttcat cgcctcgatc ggggccagga tgtggaactc catccccttc
      721 gtatcgtgat ccttcagata cttgtcgacc ttctggatga tctgcgcgtc gtgggccctg
      781 tttttatcca gccagaaaac ggcgaccgct cccgtcgccc tcgctctctt gaccgcaagc
      841 ttgacccagt cccggatcgg ggcatccttc gtctggcaca tccggaagat atcgccctcc
      901 tcaaccttct gctccagcag ggtctgcccg gaagcttcca cggcgcggat cgtcccgttt
      961 cccggggcca ggaacgtctt gtcgtgggaa ccgtactcct ccgccttctg cgccatgagg
     1021 ccgacgttcg ggacagagcc gatggtcgcg ggatcgaacg ctccgttctc cttgcaatcc
     1081 tctatgatcg tccggtacgt cgtcgcgtag caccggtcgg ggatcatcgc cttcgtttcg
     1141 tgcagcttcc cgtccggccc ccacattttt ccggaatcgc gaacgacgac cggcatggac
     1201 gcgtcgacga tgatatcgct cggcacgtgc aggttcgtga tccccttgtc cgagtcgacc
     1261 atcgcgaggg ccggacggtt cttgtacacg gcctggatgt ccgcctcgat ctccgccttt
     1321 ttcgcttccg gcaatttttt aatcttcgcg tacaggtcgc ccatgccgta gtcggcgttt
     1381 acgcccagct ctttgaacac tgccgcgtgc ttctcgaaaa cgtccttgta gtagacggat
     1441 acggcgtgcc cgaacatgac cgggtcggag atcttcatca tggttgcttt gaggtgcagc
     1501 gacagcagca cgccgctctt cttcgcttcc tcgatctgct cttcgtagaa tttccgcaag
     1561 gcgcggacgt tcatcgccgt cgcatcgatc acttcccctt ccagcagctc cagtttcttc
     1621 ttcaggacgg tcaccttccc gtccccggcg acgaactcga tccgtatctc cgtcgccttt
     1681 ttcacggtgg tggatttctc gctgccgtaa aagtccccgc cgctcatatg ggccacgtgg
     1741 gttttcgaat cccgggtcca tgcccccatc ttgtgcggat gcttcttcga gaactgtttc
     1801 accgagagcg gcgccctgcg atccgagttt ccttgccgaa gcaccgggtt cacggcgctt
     1861 ccgaggatct tcgcgtactt cgcctggagc gccctctccg cgtcggtttt cggttcctcg
     1921 ggatagtccg ggaggttgta cccgtgcgcc cgcaactcct tgatcgccgc catcagctgc
     1981 gggatggtag cgctgatgtt gggcagcttg atgatgttgg cttccggcgt cagcgcgagc
     2041 gcgcccagtt tcgccatatg atccgggatc ctctggctct cggtcaggta ttcggggaaa
     2101 tttgcgatga tcctgcccgc aagagagata tcgctcgttt cgacggaaac gccggtcccc
     2161 ttcgtgaacg cctggatgat gggaagcagg gagtaggtcg ccaatgcggg cgcctcgtcg
     2221 attttcgtcc agatgatctt tgccgttcct gtcgtcatgt cccctccgtt cgtcatggac
     2281 gcgagatcgg atttcaatct tccgagaagg tttaactgac tatatccaac tcactgaaaa
     2341 aataaccaat ttccgttgcg gccgtctccg gggcatcgga gccgtggacg atgttctgct
     2401 ccacgttgtc ggccaggtcg gcccggatcg ttccccggtc ggccttcttc ggatcggtgg
     2461 cccccatcag caggcggttg cgcgcgatga cgttctcccc ctcgagcacc atcacgacga
     2521 tcgggcccga cgacatgaat tccgtgagcg agccgaaaaa gggacgctcc cggtggacgg
     2581 cgtagaatcc ctccgcctcc tttttcgaga ggtggagcat ccgcatcgcc acgacgcgga
     2641 tcccggacgc ctcgaaccgg cggatcacct cgccgatgac ccccttgcgg acgccgtcgg
     2701 gcttcacgat cgacaaggtt cgctgcggcc tcatcgcggg attcatccgt tcgtcttcgc
     2761 cctggcgagt tcgtacccgg ccatcagcgc cttcttgttc aactcctccg tccctttggg
     2821 aacgcgggag aggaccgcct tctcgaccgc ctcgagggtc acttgccccg tgatggcggc
     2881 gatggcgccc agggcgacga tgttggcgac gaacgccttc cc
//
LOCUS       DATGYW010000051         1556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_1911, whole genome shotgun sequence.
ACCESSION   DATGYW010000051 DATGYW010000000
VERSION     DATGYW010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1911"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VK429_00650"
     CDS             <1..400
                     /locus_tag="VK429_00650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012647073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="porin"
                     /protein_id="HLN90347.1"
                     /translation="TAIFDNTEKVDVGTYGFDAAFKWRGFSAQGEYFGGKAEGQTQGR
                     TVHSRGYYGQAGYFLLPKKLELAARYSCVDPNRDISQDLQVEVTGAVSYYFQGHNLKL
                     QGDYTNIHKQIAGKQATDDQQLRVQAQLAF"
     gene            487..1287
                     /locus_tag="VK429_00655"
     CDS             487..1287
                     /locus_tag="VK429_00655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014807976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HLN90348.1"
                     /translation="MILFVILLVLAALPARAEERLRMSTTTSTENSGLLAVLLPPFEK
                     KFGCKVDVVAVGTGKALKLGEAGDVDVVFVHARTLEDKFVANGFGVNRRDVMYNDFVV
                     VGPPADPAGVGKTQSAPETFRAISSKGSPFISRGDESGTHQKEKEIWASAGIVPKGAW
                     YVDAGQGMGEVLTMATQKRGYTLSDRGTYIAFRKKTDLVVVRQGDNTLWNPYGIIAVN
                     PKKHAHVKYDLAMKLVEFVTGPEGRSIIAGYKVDGEQLFFVTGEGKNN"
     gene            1379..>1556
                     /locus_tag="VK429_00660"
     CDS             1379..>1556
                     /locus_tag="VK429_00660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008568166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HLN90349.1"
                     /translation="MRRPDEAFLGEGRIGLLEAIDRCGSISRAAREVGISYKTAWDAV
                     DAMNNAAEKPLVRRA"
BASE COUNT          305 a          459 c          543 g          249 t
ORIGIN      
        1 cacggcgatc ttcgacaaca cggagaaggt ggatgtcggt acgtacgggt tcgacgcggc
       61 attcaagtgg cgcgggttct ccgcgcaggg cgaatatttc ggagggaaag ccgaagggca
      121 gacccagggc aggacagtgc actcccgtgg gtattacggg caggcggggt atttccttct
      181 cccgaagaag ctcgagttgg cggcccggta ttcatgcgtg gatccgaacc gggacataag
      241 ccaggatctc caggtcgagg tcacgggcgc cgtatcgtac tatttccagg ggcacaacct
      301 gaagcttcag ggcgactaca cgaacatcca caagcagatc gccgggaagc aggcgacgga
      361 cgatcagcag ctgcgggtac aggcacagct cgcgttctga tcgtccccgg gaccccgggg
      421 ggctgacggc gaacgtcttg acgaaagggg agcggaacca tgagaagacc ctgtcggatt
      481 cctggaatga tcctgttcgt tatcctgctg gtccttgctg cacttccggc ccgcgcggag
      541 gagcggctgc ggatgtccac cacaacctcc acggagaact ccggcctcct cgcggtgctc
      601 ctccctccct tcgaaaagaa gttcggctgc aaggtcgacg tcgtcgccgt cgggaccggg
      661 aaggccctca agctggggga ggcgggcgac gtggacgtcg tgttcgtcca cgcgcggacc
      721 cttgaggaca agttcgttgc gaacggattc ggcgtgaacc gccgggacgt gatgtacaac
      781 gacttcgtcg tcgtggggcc accggccgac cctgcgggtg tcgggaagac gcagagcgcg
      841 ccggagacgt tccgggcgat ttcgtcgaag gggagcccgt tcatctcccg cggtgacgaa
      901 tcggggacgc accagaagga gaaggagatc tgggcgtccg ccgggatcgt ccccaagggc
      961 gcctggtacg tcgatgcggg gcaggggatg ggggaggtcc tcacgatggc cacccagaag
     1021 cgggggtaca ccctctccga ccggggcacc tatatcgcct tccgtaagaa gaccgacctc
     1081 gtcgtcgtgc gacagggaga taatactctc tggaacccgt acgggatcat cgccgtcaac
     1141 ccgaagaagc acgcccatgt aaagtatgat ctggcgatga agctcgtcga gttcgtcacg
     1201 gggccggagg ggcgatcaat tatcgcaggg tacaaggtgg acggcgagca gctcttcttc
     1261 gtcaccgggg aggggaagaa caattaaggg gaagcccggc ggaaaacgcg tcaccggcgt
     1321 gatccattcc cacgtgcgcg gggcaggcgg atccgtttcg atcgcggcga cgctctccat
     1381 gcgccgcccg gacgaggcgt ttctcgggga gggccgcatc ggcctgctgg aggcgatcga
     1441 ccggtgcggg tcgatcagcc gcgccgcccg cgaggtcggg atcagctaca agaccgcgtg
     1501 ggacgccgtc gacgcgatga acaacgccgc ggaaaaaccg ctcgtccgcc gggcgg
//
LOCUS       DATGYW010000052         2374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_162500, whole genome shotgun sequence.
ACCESSION   DATGYW010000052 DATGYW010000000
VERSION     DATGYW010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162500"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            247..1422
                     /locus_tag="VK429_00665"
     CDS             247..1422
                     /locus_tag="VK429_00665"
                     /inference="COORDINATES: protein motif:HMM:TIGR01891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HLN90350.1"
                     /translation="MDPARRKILKITDRLAPRAARMLREITSFAELPMKETRTSETLS
                     GFLAGRGFRVKRGVAGMETAFRAEFSFGKGRPAVAFLCEMDALPGLGHACGHNIVGVA
                     SACAAAALAEFGKGVFRAGKVIALGTPAEETGYGKARMVEKAVFRGIDAAMMVHPSSR
                     RHVAKGYLALAKLHFTYHGRAAHAAAYPEHGINALDGVLLLFNGVSALRQQLPDTVRV
                     HGIVTEGGRAPNIIPERAKAYFYVRGETLAEMRDAVVRVKACAAGAATASRCRLEVEE
                     GAYTLSPMKVNPVLVDAYRRALTLLGVPESGTPTNRNRGSSDIGNVSQIVPTLQPNVP
                     ISSGARVEIHTRAFEEATTQPSGIGGMMEGIRALALTGYDLFADPSLVRDAWKMFRG"
     gene            complement(1427..>2374)
                     /locus_tag="VK429_00670"
     CDS             complement(1427..>2374)
                     /locus_tag="VK429_00670"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HLN90351.1"
                     /translation="GVPGRSMGIEIARSLGFPDEVLERARGYLSGPGPNLPEVIDRLE
                     RERERVRAEAAELAARRREAEEAARRLDAERTKMKAEESRVVSAARLKMREEIRKAEG
                     ELARVTEEMRKDRKIDTVRKASSVIRAWKEKAHAAEEDPAVRTLMSRSAPLEPGEVLF
                     PGRKVFVVSLSKEAEVAAPAAAGDREVEVAAGGMKVRVPRDQVRVFPPPGGTRERRAD
                     GGSRPVEASPGAVHLQTPENTLDLRGMYVDDALPEIDAFLDRQSLAQASHVFLIHGHG
                     TGALKTAVRRHLATSPYAKRSLPAPREQGGDGVTIVLLA"
BASE COUNT          341 a          854 c          830 g          349 t
ORIGIN      
        1 ggtccccttc cgctccgagc aactgctcgt cgtaggccgt cccgagggaa ccgtgggcga
       61 cgaagaactg ggtgacggcg tcgaccgcct cgcggcgggt ctggacggag aacgatttcc
      121 agcgggtcat ggggtaggag caagatagaa gatgggaggg ggaaacgcaa gccccttcgg
      181 gggcgcgtgg ccgccatccg gttgtggtat catccgtttc tgttccgcag gaaagcgcga
      241 gcgcccatgg atcccgcgag aagaaaaatc ctgaagatca ccgaccggct ggccccgcgg
      301 gccgcccgca tgctgcgaga gatcacgtcg ttcgccgaac ttcccatgaa agagacccgc
      361 acctccgaaa ccctctccgg gttcctcgcc gggcgggggt ttcgcgtgaa gcgcggcgtg
      421 gccgggatgg agacggcctt ccgggcggag ttttccttcg ggaaagggcg gcccgccgtc
      481 gcgttcctgt gcgagatgga cgcgcttccc gggctggggc acgcgtgcgg gcacaacatc
      541 gtgggggtgg cgtcggcgtg cgcggccgcc gcgctggcgg agttcgggaa aggcgtcttc
      601 cgcgcgggga aggtgatcgc cctcggaacg cccgccgagg agacggggta cggcaaggcc
      661 cggatggtcg agaaggcggt cttccggggg atcgacgcgg cgatgatggt ccacccgtcc
      721 tcccgccgcc acgtcgcgaa ggggtatctc gcgctggcca agctgcactt cacgtaccac
      781 gggcgggcgg cgcatgcggc ggcgtacccg gagcacggga tcaacgcgct cgacggcgtc
      841 cttctcctct tcaacggcgt ctccgcgctg cgccagcagc ttccggacac cgtgcgcgtt
      901 cacggcatcg tcacggaggg ggggcgcgcc cccaatatca tccccgagcg ggcgaaggcg
      961 tacttctacg tgcggggcga gacgctcgcg gagatgcgcg acgcggtcgt gcgcgtgaag
     1021 gcgtgcgccg caggcgcggc gacggcctcc cgttgccggc tcgaagtgga ggagggggcg
     1081 tatacgctgt cgccgatgaa ggtgaatccc gtcctggtcg acgcctaccg gcgggcgctg
     1141 acgctgttgg gggttccgga gagcggcacg ccgacgaacc ggaaccgcgg ctcctccgac
     1201 atcggaaacg tctcccagat cgtccccacg ctgcagccga acgtccccat ctcctccggg
     1261 gcccgcgtcg aaatccacac ccgggccttc gaggaggcga cgacgcagcc gtccggcatc
     1321 ggggggatga tggaggggat ccgcgccctc gcgcttacgg gatacgacct gttcgccgac
     1381 ccgtccctcg tgcgcgacgc atggaaaatg ttccgcggat aagggatcag gcgaggagga
     1441 cgatcgtgac gccgtcgccg ccctgttcgc ggggggcggg gagggaccgc ttcgcgtagg
     1501 gagatgtcgc gaggtggcgc cgcaccgccg tcttcaacgc gccggtgccg tgcccgtgga
     1561 tcaggaaaac gtgggacgcc tgggccagcg actgccggtc gaggaaggcg tcgatctcgg
     1621 ggagcgcgtc gtccacgtac atcccgcgca ggtcgagggt gttctccggc gtctgcaggt
     1681 gcaccgcccc cggcgacgcc tccaccggcc gcgacccgcc gtccgcccgc cgttcccgcg
     1741 tccctcccgg cggcgggaag acgcggacct ggtcgcgcgg gacacggacc ttcatcccgc
     1801 ccgcggccac ctccacctcg cggtccccgg ccgccgccgg cgcggccact tccgcctcct
     1861 tcgacagcga cacgacgaac accttcctcc cgggaaagag cacctccccg ggctcgaggg
     1921 gagcggaccg gctcatcagc gtccggacgg cggggtcctc ttccgccgcg tgcgccttct
     1981 ccttccacgc gcggatcacc gaggaggcct tccgcaccgt gtcgatcttc cggtccttcc
     2041 gcatctcctc cgtgacgcgg gcgagttccc cttccgcctt ccggatctcc tcccgcatct
     2101 tcaggcgcgc cgcggagacc acacgcgact cctcggcctt catcttggtc cgctccgcgt
     2161 cgagccgccg cgccgcctcc tcggcctccc gacgccgcgc cgcaagctcc gccgcctccg
     2221 cgcgcacccg ttcgcgctcc cgctcgagcc ggtcgatcac ctccggcagg ttcgggccgg
     2281 ggccggaaag gtaccccctc gcccgctcga ggacctcgtc cggaaagccg agggaccgcg
     2341 cgatctcgat ccccatggaa cggccgggga cccc
//
LOCUS       DATGYW010000053         2836 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_111882, whole genome shotgun sequence.
ACCESSION   DATGYW010000053 DATGYW010000000
VERSION     DATGYW010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2836
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111882"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1042)
                     /locus_tag="VK429_00675"
     CDS             complement(<1..1042)
                     /locus_tag="VK429_00675"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HLN90352.1"
                     /translation="MVQKHLLDNGTTVLIDEMQDVRSFALGFFVGAGSGEEPAGKRGL
                     SHFLEHVLFKRTRRRTTVAIARAIDRLGGDVDAFTTKEYTGFYAHTLDSRFSEALDLL
                     GDIVLAPAFDLDDIEVERGVILEEIGETNDDPDDLVHEMFVRSFWRTHPLGEPILGTA
                     QTVKGIGLGDLYRYYRERYTPDNLIISVAGHVRELEVLNSLEKVFRRRNGRSYGRSPG
                     KLPAAKPHSHQHIQVKSRRGLEQAHVCLGVEGPAQGSGRRFAAHLVDIVLGGGMSSRL
                     FQEVREKRGLVYSIASNLNSYRLGGYETIYAACAPKNLARVLDVTLRELRKLKRDGVR
                     PRELAWAKQNLKG"
     gene            complement(1180..1782)
                     /locus_tag="VK429_00680"
     CDS             complement(1180..1782)
                     /locus_tag="VK429_00680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90353.1"
                     /translation="MGRIPERGFTMVAVVIIIAILTILIAAVGPSIGAIMRREREEEL
                     IFRGKQYARAIALFQRRYGRYPTSLKEMWENNPRTIRKLWKDPMCDCADWKLLIQGQP
                     DSVPFLDQNVDPSNRPPSTYTNLIRPTPTPGMSGPEGEEKNVGPIVGVRSKVHRQALR
                     EWRGRRFYDEWRFIVGDADSDVAFTPFNPGTLRLTPGRRP"
     gene            complement(1785..2249)
                     /locus_tag="VK429_00685"
     CDS             complement(1785..2249)
                     /locus_tag="VK429_00685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020258609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HLN90354.1"
                     /translation="MNSQASGPGSRSSSLSRFPTSERGFTLLELLVVMTIIGILAAIA
                     IPALRDSPQRAREAALRGDLFTLRSTIDQFHGDKGYYPPDLAKLVSEGYLRQIPIDPM
                     TKSRDTWQVDAEELEPTAEGAAPPEESLTPGIVDVHSGSTGKALDGTLYKDW"
     gene            complement(2290..>2836)
                     /locus_tag="VK429_00690"
     CDS             complement(2290..>2836)
                     /locus_tag="VK429_00690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015898012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HLN90355.1"
                     /translation="ERLIPRSLPLPQREPPPFGRLLALRPGASRNRELGFTMVEMAVV
                     AAMITILSAMAIPVARYTLKRQNELELRYQLRLMRNAIDKYKQYSDAGLIPLAGVDTE
                     GYPTDLDVLVDGVDLVGQVNKKMKFLRRVPIDPMTKKAEWGLRSFQDDKDSLSWGGQN
                     VYDVFSLSGGRGIDGTYYKDW"
BASE COUNT          476 a          906 c          930 g          524 t
ORIGIN      
        1 tgcccttcag gttctgcttg gcccaggcga gctcccgcgg ccggacgccg tcgcgcttca
       61 acttgcgcag ctcccgcagg gtcacgtcga ggacgcgtgc gaggttcttc ggcgcacagg
      121 cggcgtaaat cgtctcgtac ccacccagcc gataggagtt caggttcgac gcgatcgaat
      181 agacgagccc ccgcttctcg cggacctcct ggaagagccg cgaggacatg cctcccccca
      241 gaacgatgtc cacgagatga gcagcaaaac gccggccgct cccctgagcc ggcccctcca
      301 cgccgagaca gacgtgggcc tgctcgagtc ctcgccggga cttgacctgg atgtgctggt
      361 gcgagtgcgg ttttgcggcc ggcagcttcc cgggagagcg gccgtagctg cggccgttgc
      421 ggcggcggaa aaccttttcg agggagttga gcacctcgag ctctcgcacg tgtccggcga
      481 ccgagatgat caggttgtcc ggggtatagc gctccctgta gtaccggtag aggtcgccca
      541 gtccgattcc cttcaccgtc tgggctgtcc cgaggatcgg ctcccccaga gggtgcgtgc
      601 gccagaagga ccggacgaac atctcgtgaa cgaggtcgtc ggggtcgtcg ttggtctcgc
      661 cgatctcctc gagaatgacc ccccgctcga cttcgatgtc gtcgaggtcg aacgccggcg
      721 cgagcacgat atctcccagc aggtccagag cttccgagaa acgggagtcc agggtgtggg
      781 cgtagaaacc cgtgtactcc ttggtcgtga aggcgtcgac gtccccgccg agccggtcga
      841 tcgcccgcgc gatggcgacc gtcgtccgcc ttcgggtccg cttgaagagg acgtgctcca
      901 ggaaatgcga cagaccacgc ttgccggccg gttcttctcc cgagccggct ccgacgaaga
      961 agccgagcgc gaaggaccgc acgtcctgca tctcgtcgat caggacggtc gttccgttat
     1021 cgagaaggtg tttttggacc atcggagacc cccggcaggc agaccgattc tatccccggc
     1081 cgggcagcgg tggcgatttc tttaaatgat taataagagg gtacttatct tgtgagaatg
     1141 gccccagggg gggccccggg ctaccccgga aaccggggtt tacgggcgcc ggccgggcgt
     1201 caaacggagg gtcccggggt tgaacggcgt gaaagccacg tcgctgtcgg cgtcgccgac
     1261 gatgaacctc cactcgtcat aaaagcgcct tcccctccac tcgcgaagcg cctggcggtg
     1321 gaccttggag cgcacaccca cgatcggccc cacgttcttc tcttcgcctt cggggcccga
     1381 cattcccggc gtcggagttg gacggatgag gttcgtgtaa gtcgaagggg ggcggttgct
     1441 cgggtcgaca ttctggtcca ggaacgggac cgagtcgggc tgcccctgga tcaggagctt
     1501 ccagtcggcg cagtcgcaca tcgggtcctt ccagagcttc cggatcgttc gggggttgtt
     1561 ctcccacatc tccttgaggg aggtcgggta gcgcccgtac cgccgctgaa acagcgcgat
     1621 cgctcgtgcg tactgtttgc cgcggaagat gagctcttcc tcgcgctcgc gccgcatgat
     1681 ggccccgatc gacgggccga ccgccgcgat caggatcgtc aggatggcga tgatgatcac
     1741 gaccgcgacc atggtgaagc cccgttcggg aatccgcccc acggttacca gtccttgtac
     1801 aaagtcccgt cgagggcctt cccggtcgag ccactgtgga cgtcgacgat gccgggggtg
     1861 aggctctcct cgggtggggc cgccccttca gcagtcggct cgagctcctc cgcgtccacc
     1921 tgccaggtat cgcgcgactt cgtcatcgga tcgatcggga tttgcctcaa gtatccctcg
     1981 gagacgagtt tggcgaggtc gggcgggtag tagcccttgt cgccatggaa ctggtcgatc
     2041 gtgctgcgca aagtgaacag gtccccccgg agggcggcct cgcgggcgcg ctggggggaa
     2101 tcccgcaagg cggggatcgc gatcgccgcg agaatgccga tgatcgtcat caccaccagg
     2161 agctcgagga gggtgaagcc ccgctcggaa gtcgggaaac gggaaaggga agaggaacgg
     2221 ctaccgggcc cgctcgcttg ggaattcact cgttttcccg tgtcagtttt ccgtttcccg
     2281 gccaatcgct caccagtcct tgtagtaggt cccgtcgatg ccccttccgc cggaaaggga
     2341 aaagacgtcg tagacgttct gcccgcccca cgacaaggaa tccttgtcgt cctggaacga
     2401 acgaaggccc cactccgcct tcttcgtcat cgggtcgatc gggacgcgcc ggagaaactt
     2461 catcttcttg ttgacctggc cgacgaggtc cacgccgtcg accaggacgt cgaggtccgt
     2521 cgggtagccc tcggtgtcga cccctgcgag cggaatcagt cccgcgtcgg aatactgctt
     2581 gtacttgtcg atcgcgtttc gcatcaggcg cagctggtat cgcagctcga gctcgttctg
     2641 gcgcttcaac gtgtaccgcg cgaccgggat cgccatcgcg ctcaggatgg tgatcatcgc
     2701 cgccacgacg gccatctcga ccatcgtgaa gcccagttcc cggtttcggc tggctccagg
     2761 tcgcagcgcg agaagtctcc cgaagggagg aggctcgcgc tgcgggagcg ggagcgagcg
     2821 agggatcagg cgctcg
//
LOCUS       DATGYW010000054         3787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_58209, whole genome shotgun sequence.
ACCESSION   DATGYW010000054 DATGYW010000000
VERSION     DATGYW010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3787
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58209"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..713
                     /locus_tag="VK429_00695"
     CDS             <1..713
                     /locus_tag="VK429_00695"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF014296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HLN90356.1"
                     /translation="ITALTILQQVGIEPILHYCCRDRNLIGMQSDLLGGYAAKLANFL
                     IITGDPPKLGEYPDVTGVFDVDAIGLVQVASNLNRGLDIGGNPIDPPTGLFLGVGANP
                     CAVDLEREIERYFRKIDAGAEFAITQPVFDPEALLRFLDRVETYRRKIPVLAGVWPLL
                     SFKNAEFMNNEVPGVVVPKAILDRMSRCRTREDGRKAGIEIARGIVERISDRVNGFQV
                     SAPMGHVETALAVLGKSS"
     gene            771..1148
                     /gene="gcvH"
                     /locus_tag="VK429_00700"
     CDS             771..1148
                     /gene="gcvH"
                     /locus_tag="VK429_00700"
                     /inference="COORDINATES: protein motif:HMM:NF002270.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HLN90357.1"
                     /translation="MDETGLKFSEDHIWVLEMGPTVRIGVSDYGQEQLGEILSAALCE
                     VGKFLEPGDTFSELESQKTVIELPSPVTGTVRAVNEAIRDDPSLINVDPYGKGWIVEV
                     EIDEPEEVERLMSGEEYETFVEE"
     gene            complement(1218..3278)
                     /locus_tag="VK429_00705"
     CDS             complement(1218..3278)
                     /locus_tag="VK429_00705"
                     /inference="COORDINATES: protein motif:HMM:NF014176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HLN90358.1"
                     /translation="MKEKFLAWWKLVMGSRREVTLVVAVVVGLLIVFNGAFFVAAYFP
                     GSCRACHYMDPYVDQWKASSHANVTCIKCHSFSPVFITVTTLKYWTGLYNPRPRADVK
                     DAACLANGCHEGRIEKGKAKLGNITFDHQDHMTKLKRGEKLRCTSCHNAIVQGEHIVK
                     GSHTQVDTGVCFLCHFKGISAGQALGGCPGCHGTPTKVVEHSGFMFSHESYLKLGVPC
                     QQCHIRVSEGDGKVQDAHCYDCHVGRLEKKADVLAIHRTHVTFNAIQCFKCHERVRHG
                     QVELVKTFEVQCDGCHKRLHNYQKEMYMGAGAKGVPDTPSRMFSAQVSCNGCHTRSVE
                     VKESGVAFPGESKLAAERQSCVVCHGKRYDLMLDDWVRESRVLVADLERIVAAGKAAV
                     GSGATTDRKLSQARTLVADAQANLAFLRAGRGSHNIEYALKIVRVGFEQVTAAYRMAG
                     VTGGPPKPAILASPSAYCATLCHSRVMPSDKVFFREMELQFPHALHVKDVGIECAKCH
                     SPEKHKMRIVTKSECMKCHHESRDIDCGHCHKAQQALYEGKVKVYGVTPAKDVMAAAD
                     TKCIDCHDLKKGTQTVLTVKAKCEGCHDAKYGKMLLDWKQEITKQENAIAVALEEAKE
                     YVARTKKAGRDVSKEEALVRQADANYQAVSAGRGVHNYKLSREMLRAAKADLDKVLAA
                     KRQK"
     gene            complement(3275..>3787)
                     /locus_tag="VK429_00710"
     CDS             complement(3275..>3787)
                     /locus_tag="VK429_00710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HLN90359.1"
                     /translation="MLIYFMVHHFLYTILTRDGRRDFMLLLPKLGDAKDIAHNIRHFL
                     GKEPDKPRFGRFSYIEKFDYWAVYWGCIIMIGSGLFLWFETDVLRFLPKYALDVAHEM
                     HSDEAMLATLAIVVWHFYNVHFNPDRFPGTLLWWHGRMSEHEMKEEHPLELEEIVARR
                     AKESAEVTNR"
BASE COUNT          624 a         1259 c         1192 g          712 t
ORIGIN      
        1 tgatcaccgc cctcaccatc cttcagcagg tcgggatcga gccgatcctc cactactgct
       61 gccgcgaccg gaacctgatc gggatgcagt ccgaccttct ggggggttac gccgcgaagc
      121 tcgccaattt cctcatcatc accggggacc ccccgaagct gggggaatac ccggacgtga
      181 ccggcgtctt cgacgtggac gcgatcgggc tggtccaggt ggcgtccaac ctgaaccgcg
      241 ggctggacat cggcggcaac ccgatcgatc ctcccacggg cctgttcctc ggggtgggcg
      301 ccaacccgtg cgcggtggac ctggagcgcg agatcgagcg gtacttccgg aagatcgacg
      361 cgggggcgga gttcgccatc acccagccgg tgttcgatcc cgaggcgctg ctgcggttcc
      421 tcgaccgcgt ggagacgtac cggcggaaga tccccgtgct cgcgggggtg tggcctctcc
      481 tcagcttcaa gaacgccgag ttcatgaaca acgaggtccc cggcgtggtc gtgccgaagg
      541 cgatcctcga tcggatgtcg cgctgccgga ccagggagga cggacgcaag gcggggatcg
      601 agatcgcccg cgggatcgta gagaggatct cggaccgcgt gaacggtttc caggtgagcg
      661 ccccgatggg gcacgttgaa acggcgctgg cggttctcgg aaaatcttcc tgaaactttt
      721 ctccccttca gttgacaatt ccctcccgcg tcgaagtaca ctggcagcct atggacgaga
      781 ccgggctgaa attctccgaa gatcacatct gggtcctcga gatgggaccc accgttcgca
      841 tcggcgtttc cgactacggg caggagcagc tgggggagat cctctccgcg gcgctgtgcg
      901 aggtcggaaa gttcctggag ccgggagaca ccttcagcga gctggaatcc cagaaaaccg
      961 tgatcgagct cccctccccc gtcacgggga cggtccgggc cgtcaacgag gcgatccggg
     1021 acgacccctc cctgatcaac gtcgacccgt acggcaaggg gtggatcgtc gaggtcgaga
     1081 tcgatgagcc cgaggaggtc gaacggctga tgagcggcga ggagtacgag acgttcgtcg
     1141 aggagtagcc cgctcacgga caccaaaaag aaacgccccg cggggaaccc cacggggcgt
     1201 tttatctacc ggcctggtta cttctggcgt ttggcggcaa gcaccttgtc gaggtcggcc
     1261 ttcgccgccc ggagcatctc cctgctgagc ttgtagttgt ggactccgcg gccggcggag
     1321 accgcctggt agttcgcgtc cgcctgacgg accaacgcct cctccttcga gacatccctc
     1381 ccggccttct tcgtgcgtgc gacgtactcc ttcgcctcct cgagcgctac ggcgatggcg
     1441 ttctcctgct tcgtgatctc ctgcttccag tcgaggagca tcttgccgta cttcgcgtcg
     1501 tggcacccct cgcacttcgc cttgacggtc agcaccgtct gcgtaccctt cttcaggtcg
     1561 tggcagtcga tgcatttcgt gtccgcggcc gccatcacgt ccttcgccgg ggtcacgccg
     1621 tacaccttca cctttccctc gtagagggcc tgctgcgcct tgtggcaatg cccgcagtcg
     1681 atgtccctgc tctcgtggtg gcacttcatg cactcggact tcgtcacgat gcgcatcttg
     1741 tgcttctcgg gggagtggca cttcgcacac tcgatcccca cgtccttcac gtgcaacgcg
     1801 tgggggaact ggagctccat ctcccggaag aagaccttgt ccgacggcat cacgcgggag
     1861 tggcacaggg tggcgcagta cgccgacggc gaggcgagga tcgccggctt cgggggaccg
     1921 cccgtcacac ccgccatccg gtaggccgcg gtcacctgtt cgaaccccac ccgaacgatc
     1981 ttgagggcgt attcgatgtt gtgggagccg cgccccgcgc ggaggaaggc gaggttcgcc
     2041 tgcgcgtccg cgacgagcgt ccgcgcctgg gaaagcttcc tgtcggtcgt cgccccgctc
     2101 ccgacggccg ccttcccggc cgccacgatc cgttccaaat cggccaccag gacgcgggat
     2161 tcccggaccc agtcgtcgag catcaggtcg taccgcttcc cgtggcacac gacgcagctc
     2221 tgccgctccg ccgcgagctt gctttcgccc gggaacgcca ccccggactc cttcacctcg
     2281 acggaccggg tgtggcaccc gttgcacgaa acctgcgccg agaacatccg cgacggggtg
     2341 tcggggacgc ccttcgcccc cgcccccatg tacatctcct tctggtagtt gtgcagccgc
     2401 ttgtggcagc cgtcgcactg gacctcgaac gtcttcacca gctcgacctg tccgtgccgg
     2461 accctctcgt ggcacttgaa gcactggatc gcgttgaagg tgacgtgcgt gcgatggatc
     2521 gccagcacgt cggccttctt ctcgagccga ccgacgtggc agtcgtagca atgggcgtcc
     2581 tggaccttcc cgtctccctc ggacacccgg atgtggcact gctggcatgg aacgccgagc
     2641 ttcaggtacg actcgtggga aaacatgaag ccgctgtgct ccacgacctt cgtgggcgtc
     2701 ccgtggcacc ccgggcagcc gcccagggcc tgccccgcgc tgatcccctt gaagtggcac
     2761 aggaaacata cgccggtgtc gacctgggtg tgcgacccct tgacgatatg ctccccctgg
     2821 acgatcgcgt tgtggcagct cgtgcagcgc agcttctcgc cgcgcttcag cttcgtcatg
     2881 tggtcctggt ggtcgaaggt gatgttcccc agtttcgcct tccccttttc gatccttccc
     2941 tcgtggcacc cgttcgccag gcacgcggcg tctttcacgt cggcgcgcgg tcgcgggttg
     3001 tagagccccg tccaatactt gagggtggtc accgtgatga agacgggcga gaaggagtgg
     3061 cacttgatgc acgttacgtt cgcgtgggag gaggccttcc actggtcgac gtaagggtcc
     3121 atgtagtggc acgcacggca ggagccgggg aagtacgccg caacaaagaa ggccccgttg
     3181 aagacgatca ggagtccgac cacgaccgcg acgacgagcg tgacctcccg gcggctcccc
     3241 atcaccaatt tccaccacgc caagaatttc tccttcatcg gttggtgacc tccgccgact
     3301 ccttggctcg ccgcgccacg atttcctcca gctcgagggg gtgctcctcc ttcatctcgt
     3361 gctcggacat ccggccgtgc caccagagca gcgtccccgg gaaccggtcg gggttgaagt
     3421 ggacgttgta gaagtgccag acgacgatgg caagcgtggc gagcatcgcc tcgtcgctgt
     3481 gcatctcgtg cgccacgtcg agggcgtact tcgggaggaa ccggaggacg tccgtctcga
     3541 accacaggaa cagccccgac ccgatcatga tgatgcagcc ccagtagacc gcccagtagt
     3601 cgaacttctc gatgtagctg aacctcccga agcgtggctt gtcgggctcc ttgccgagga
     3661 agtgccggat gttgtgcgcg atgtccttcg cgtcgccgag cttcgggagg aggagcatga
     3721 agtcacgccg cccgtcccgc gtcaggatcg tgtagaggaa gtggtggacc atgaagtaga
     3781 tcagcat
//
LOCUS       DATGYW010000055         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_325880, whole genome shotgun sequence.
ACCESSION   DATGYW010000055 DATGYW010000000
VERSION     DATGYW010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_325880"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..747)
                     /locus_tag="VK429_00715"
     CDS             complement(<1..747)
                     /locus_tag="VK429_00715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013955343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HLN90360.1"
                     /translation="MTNVRKLAGRGGLYALLASFAFFGAFPFYWMVIATFKTDHDLFS
                     PLNNPFLFNEPPTLDHLKVLLFETHFHTYLTNTLWVGLAVVVITLVVAVPAAYSLARW
                     ARGWGEMLGIGIFLTYLVPPTILFIPLSRFTSSLGLQESLWSLILVYPTFTIPFCTWL
                     LMGFFKTIPKDIEEQAMIDGLSRFGAMSKVVLPLSISGILTVVVFAFTLSMHEFIYAL
                     TFISVSMKKTVSIGVPTELVRGDVFQWGSLM"
     gene            complement(747..>1711)
                     /locus_tag="VK429_00720"
     CDS             complement(747..>1711)
                     /locus_tag="VK429_00720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020418584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HLN90361.1"
                     /translation="AVVSGPSVSNPAAVDGARAGLLDREGALAKLMIAPAILYIVAMI
                     GVPFVLAVLYSLSDATTGDPSIRIVGLRNFRAALEDPVFRLALWNTIFFTLASQCIVV
                     LLSRLLATALLKTFRGKWLVRFLIMLPWTAPISLGTIGWLWMLDSIFSPIDWVLRYVG
                     LLGVPGALLGAGTNLYYLGIPGLAISSIILVDVWRILPLATVIQLAGLSSIPKDLLEA
                     AEVDGAPPWRRTLMITIPLTLPITSIAFLFGVVFTFTDLVVVYVLTRGGPIHATQVLS
                     SWTFFKGIEGGDLAQGAAISLFMFPVLAAVAILILRTARRTEVV"
BASE COUNT          367 a          511 c          603 g          230 t
ORIGIN      
        1 catgagcgaa ccccattgga agacgtcccc gcgcacgagc tccgtgggca ccccgatcga
       61 caccgtcttc ttcatcgaaa cggagatgaa ggtcagggcg tagatgaact cgtgcatcga
      121 gagggtgaag gcgaacacca ctaccgtcag gattcccgag atcgaaagcg gcaagacgac
      181 cttcgacatc gccccgaacc ggctcaagcc gtcgatcatc gcctgctcct cgatgtcctt
      241 cgggatcgtc ttgaagaacc ccatgagcag ccacgtgcag aaggggatcg tgaaggtcgg
      301 gtagacgagg atcagggacc agagcgactc ctggagcccc agggaggagg tgaaccggga
      361 cagggggatg aacaggatcg tcggtggaac gagataggtg aggaagatcc cgattccgag
      421 catctcgccc cagccccgcg cccaccgggc cagcgagtac gccgcgggga cggcgaccac
      481 gagggtgatg accacgacgg cgagaccgac ccagagcgtg ttcgtcaggt acgtatggaa
      541 gtgggtttca aagagcagaa ctttgaggtg gtccagcgtg gggggctcgt tgaacaggaa
      601 gggattgttc agcgggctga agaggtcgtg gtccgtcttg aacgtggcga tcaccatcca
      661 gtagaacggg aacgccccga agaaggcgaa ggaggccagc agcgcgtaga gccccccgcg
      721 gcccgcgagt ttccgcacgt tcgtcatcag accacctccg tccgtcgcgc cgtccgcagg
      781 atcaggatcg cgaccgcagc gagcacgggg aacatgaaca gggagatggc cgccccctgg
      841 gcgaggtccc cgccctcgat ccccttgaag aaggtccagg aagagagcac ctgcgtggcg
      901 tggatcggcc cgccccgggt caggacgtag acgacgacca ggtcggtgaa ggtgaagacg
      961 accccgaaga ggaaggcgat gctcgtgatg ggaagggtga gcgggatcgt gatcatcagg
     1021 gtccggcgcc acgggggggc cccgtccacc tcggcggcct ccaggaggtc cttggggatg
     1081 gagctcaacc ccgccagctg gatgaccgtc gccaggggga ggatgcgcca cacgtccacg
     1141 aggatgatcg aggagatcgc cagcccgggg atccccaggt aatagaggtt cgtccccgct
     1201 cccaggaggg ctcccgggac gccgagcagc ccgacgtagc gcaggaccca gtcgatgggg
     1261 ctgaagatcg agtcgagcat ccagagccag ccgatcgtcc cgagggagat cggcgccgtc
     1321 cacgggagca tgatgaggaa ccggacgagc cattttcccc ggaacgtctt gaggagggcg
     1381 gtggcgagca gccgggacag aaggacgacg atgcactgtg aggccagcgt gaagaagatg
     1441 gtgttccaca gggcaagccg gaagacggga tcctccaatg ccgccctgaa gttccgcaag
     1501 ccgacgatcc ggatggaggg gtccccggtg gttgcgtcgc ttaaggagta caggaccgcc
     1561 aggacgaagg ggacgccgat catcgccacg atgtagagga tcgcgggggc gatcatcagc
     1621 ttcgcgaggg cgccttcccg gtccaggagc cccgcgcgcg cgccgtcgac cgccgccggg
     1681 ttcgaaaccg aaggcccgct cacgacggcc c
//
LOCUS       DATGYW010000056         1673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_325988, whole genome shotgun sequence.
ACCESSION   DATGYW010000056 DATGYW010000000
VERSION     DATGYW010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_325988"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /locus_tag="VK429_00725"
     CDS             <1..564
                     /locus_tag="VK429_00725"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HLN90362.1"
                     /translation="EVDGTSDSAAREADRVEKACHANGALEVRRASDAEGRDELWKLR
                     RSISPTLLHLGAVKLNEDIVVPRSRLADMFAFLSDLAARKKVRIVTFGHAGDGNIHVN
                     IMISGTDTDETRRAEEAVAEVFRKTVEMGGTISGEHGVGISKAPFLEMEVGPLGVDVM
                     KRLKACFDPNGILNPGKIFLDEAAVRV"
     gene            561..>1673
                     /locus_tag="VK429_00730"
     CDS             561..>1673
                     /locus_tag="VK429_00730"
                     /inference="COORDINATES: protein motif:HMM:NF014774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HLN90363.1"
                     /translation="MRDADLKALTGLCAKCGTCRTVCTLYPERKAEIAVARGKIALIE
                     AAMSGEDGDAEAVQEALTDCLLCGRCERACPNQVLVEEIVMKGRADLAEEVGIPAWKR
                     VLFGKVMTSPAATGIARKAAAAGQRLLPGKIPTASGLHYRFPDGLGGEGRTVPKLPGK
                     GFLESLGRAEATTGEVMLFVGCVFDHVFPQVGRAAYDTVKASGKSVAVFRDAACCGLP
                     AMVSGDRRSAAECAGENVRRLRDADPRAIVFPCGSCLLMFRRNVFSLIPKGTPAYDDA
                     AFVADRAMDYASFLLSSGVLDRLPDPPPGEKVGEIGYHDPCHLSGTLGKGPEARKVLS
                     RAVGPAFAEMAGADLCCGYGGTFNVRDYPTSSRIGEN"
BASE COUNT          257 a          531 c          639 g          246 t
ORIGIN      
        1 gaggtggacg gtacgagcga ttccgcggcg cgggaagcgg accgggtgga gaaggcgtgc
       61 cacgccaacg gcgccctcga ggtccgccga gcgtccgacg cggaggggag ggacgagctc
      121 tggaaactgc gccgctcgat ctccccgacc cttctccatc tcggggcggt caagctcaac
      181 gaggacatcg tcgtcccgcg aagccgcctc gccgacatgt tcgccttcct ctccgatctc
      241 gccgcccgga agaaggtgcg gatcgtcacc ttcggccacg cgggggacgg caacatccac
      301 gtgaacatca tgatctcggg cacggacacg gacgagacgc ggcgcgcgga ggaggcggtc
      361 gcggaggttt tccggaagac cgtcgagatg ggggggacga tctcgggaga gcacggggtg
      421 gggatctcca aggcgccgtt cctcgagatg gaggtcggcc cgctcggcgt cgacgtgatg
      481 aaacggctca aagcgtgctt cgacccgaac gggatcctca accccgggaa gatcttcctc
      541 gacgaggccg cggtgcgcgt gtgagggatg ccgatctgaa ggcgttgacc ggcctgtgcg
      601 cgaagtgcgg cacctgccgg acggtgtgca ccctctaccc ggagcggaag gcggagatcg
      661 ccgtcgcccg ggggaagatc gccctgatcg aggcggcgat gagcggggag gacggtgacg
      721 cggaggcggt acaggaggcg ctgaccgact gcctcctgtg cgggcggtgc gagcgggcgt
      781 gccccaacca ggtgctggtc gaggagatcg tgatgaaggg gcgcgccgac ctcgcggagg
      841 aggtcggaat ccccgcctgg aagcgggttc tcttcgggaa ggtgatgaca tccccggcgg
      901 cgacgggaat cgcccggaag gcggccgccg cggggcagcg gctgctgccc gggaagattc
      961 caacggcgag cggcctgcac taccggttcc ccgatgggct cggcggggaa gggcggaccg
     1021 tcccgaagtt gcccgggaag ggatttctcg agtccctcgg gagggcggag gcgaccacgg
     1081 gcgaggtgat gctcttcgtc ggctgcgtct tcgaccacgt cttcccccag gtgggccgcg
     1141 ccgcctacga caccgtcaag gcgtctggga aatccgtggc ggtcttccgg gacgcggcgt
     1201 gctgcggcct ccccgccatg gtctccgggg accgccggtc cgccgcggag tgcgccgggg
     1261 agaacgtgcg ccgcctgcgg gacgcggatc cccgggcgat cgtcttcccc tgcgggtcct
     1321 gtctcctcat gttccggcgg aacgtatttt ccctgatccc gaagggaacg cccgcgtacg
     1381 atgacgcggc cttcgtcgcg gaccgcgcaa tggactacgc gagcttcctc ctctcctcgg
     1441 gggtcctcga ccggctcccg gatccgccgc cgggggagaa ggtcggcgag atcgggtacc
     1501 acgacccgtg ccacctgtcg gggacgctgg ggaagggtcc cgaggcgagg aaggtgctgt
     1561 cgcgggccgt aggcccggcg ttcgccgaga tggcgggcgc cgacctgtgt tgcggctacg
     1621 gggggacgtt caatgtgcgc gactatccga cctcgtcgcg gatcggggag aac
//
LOCUS       DATGYW010000057         1787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_112039, whole genome shotgun sequence.
ACCESSION   DATGYW010000057 DATGYW010000000
VERSION     DATGYW010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112039"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1181)
                     /locus_tag="VK429_00735"
     CDS             complement(<1..1181)
                     /locus_tag="VK429_00735"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HLN90364.1"
                     /translation="MKDIRERIRARSRTVWFAFVAAGAVALVAMFWGISILSPLPPRT
                     VTMTTGSEGGAYHELGKRYREILARSGVELRLLASEGGIENLRRLSDPRSGVSVGFMQ
                     GGATGESERKDLVSLGTVSYEPLWFFYRGRNPGRKLEGLRGKGISIGPEGSGTRVLAA
                     TLLAANGIDRDVARLLPLSLHDAGEQLLSGRIDAALMVASWESTVVRRLLASKDVETV
                     SFPRADALTALYPYLNKVTVPEGAGDLARNRPPADLVLLSPKTSMVVRKELHPAIQYL
                     LLDAATEIHSGAAIFQKAGQFPAAESIDLPLSDAARQFHKTGRPFLQRYLPFWAAVFL
                     WGLILLLIPVVGAFYPLFRLAPALYGWGMRRRIFRLYGELKFLEEDLERSESTEGTDD
                     LA"
     gene            complement(1178..>1787)
                     /locus_tag="VK429_00740"
     CDS             complement(1178..>1787)
                     /locus_tag="VK429_00740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011737069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HLN90365.1"
                     /translation="STSTISNVMAGLSITYMRAFKVGDRIRIGDTVGDVIDQALLVTH
                     LRTIKNEDVTVPNSMVLNAHIVNYSARAKEEGLILHTAVTIGYDAPWRAVHELLIEAA
                     RKTPCILVEPKPFILQTALNDFYVTYELNAHTDDPQQMVNTYSALHRNIQDTFNEAGV
                     EIMSPHYTQLRDGNKTAIPDAYLPKEYVPRSIRVETVPGDRS"
BASE COUNT          290 a          595 c          590 g          312 t
ORIGIN      
        1 gcgaggtcgt ccgtcccttc cgtggattcg ctccgttcca gatcctcttc gaggaacttc
       61 aactccccgt acagccggaa aatgcgccgc cgcatccccc agccgtacag ggccggggca
      121 agccggaaga gcgggtagaa cgccccgacc acagggatca gaaggaggat cagcccccac
      181 aggaatacgg cggcccagaa cgggagatag cgctggagga agggcctccc ggtcttgtgg
      241 aactgccgcg cggcgtcact caacgggagg tcgatcgatt ccgcggccgg gaactgcccc
      301 gccttctgga agatcgccgc gccggaatgg atctccgtcg ccgcgtcgag caggaggtac
      361 tggatcgccg ggtgcaactc cttccgcacc accatgctgg tcttggggga gaggagcacc
      421 aggtccgcgg gcggccggtt cctcgccagg tccccggccc cttcgggaac cgtgaccttg
      481 ttgaggtacg gatacagcgc cgtgagggcg tccgcccgcg ggaagctgac ggtttccacg
      541 tctttcgagg cgagcagccg ccgaacgaca gtggattccc acgatgccac catcagggcg
      601 gcgtcgatcc gtccgctcag gagctgctcc ccggcgtcgt ggagggagag cgggagaagc
      661 cgcgccacgt cccggtcgat cccgttagcc gcgagcagcg tggccgccag aaccctcgta
      721 ccgctcccct ccgggccgat cgagatgccc ttgccgcgca atccctccag ttttcttccg
      781 gggttcctgc cccggtagaa gaaccagagc ggctcgtacg agaccgttcc cagcgaaacg
      841 aggtccttcc gctccgactc tccggtggcg cccccctgca tgaaccccac gctgaccccc
      901 gaccgcgggt cggagagccg ccggagattc tcgatccctc cttccgatgc cagcagccgc
      961 agttccacgc cggagcgcgc aaggatctcg cgataccgct tcccgagctc gtggtaggcg
     1021 ccgccctccg accccgtggt catcgtcacc gtgcgcggtg gcaacgggct caggatcgaa
     1081 atcccccaga acatggcgac gagggcaacg gcaccggcgg ccacgaacgc gaaccacacg
     1141 gttcgactgc gcgcccggat gcgctcccgg atgtccttca actccgatct cccgggacgg
     1201 tctctacccg tatggaccgt ggcacgtact ccttcgggag gtaggcgtcg gggatcgcgg
     1261 tcttgttgcc gtcccggagc tgggtgtagt ggggcgacat gatctccacc cccgcctcgt
     1321 tgaaggtgtc ctggatgttg cggtgcagcg ccgagtaggt gttcaccatt tgttgggggt
     1381 cgtcggtgtg ggcgttcagc tcgtacgtca cgtagaagtc gttgagtgcg gtttgcagga
     1441 taaacggctt cggctccacg aggatgcacg gggtcttccg cgccgcctcg atcaggagct
     1501 cgtggaccgc ccgccagggg gcgtcgtacc cgatggtgac cgcggtgtgg aggatgaggc
     1561 cttcctcctt cgcacgggcg ctgtaattca cgatgtgggc gttcagcacc atcgagtttg
     1621 ggacggtgac gtcctcgttc ttgatggtcc ggaggtgggt caccaggagc gcctggtcga
     1681 tcacgtcccc gacggtgtcg ccgatccgga tccggtcccc gaccttgaag gcgcgcatgt
     1741 aggtgatgct caagcccgcc atcacgttcg agatcgtcga ggtggag
//
LOCUS       DATGYW010000058         2484 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_112053, whole genome shotgun sequence.
ACCESSION   DATGYW010000058 DATGYW010000000
VERSION     DATGYW010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2484
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112053"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1343)
                     /locus_tag="VK429_00745"
     CDS             complement(<1..1343)
                     /locus_tag="VK429_00745"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLN90366.1"
                     /translation="MLIQDVLEHNARTHPSRLALVSAKEEVTYRELRDRVGGYAAVLR
                     SGGIGSGDRVAILAQNSVLYMEALFAVTRAGAALVPLNHLLIGRELVAILEDADVKAL
                     LFTEEFRGRVGEIRPSLPGIGCFVRIDDPDLPKRGGDDIPDPSPPVLETDIALIIYDG
                     GISSRPRGAMLFHRNLLAASASSALELSLSRNDVFLSCAHLPFLGGTGRLLRFLYVGA
                     TIVLQPEFDPEEALRAIERRSVTRVLLTPTMMAQILAFPSAGKFNLSTLRTVLYGGAV
                     IPLDLLKRAIRFFRCGLAQSHGQVETAGILTVLHEEDHSLDESTPYMRKLMSVGKEAI
                     GVEVRVVDEDGREIAPNEVGEIVARGPNVFEGYRNDPALTAKVLRDGWLRTGDVASVD
                     EEGYIYIVDRKRDTVTVEGISISPREIENILCEHPSVKEAAVVPRPDYTMGEVPVA"
     gene            1457..1732
                     /locus_tag="VK429_00750"
     CDS             1457..1732
                     /locus_tag="VK429_00750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90367.1"
                     /translation="MELDDFDVYPIYHNGRVYNIITAMDLTFREVRGMIDALAGMGAF
                     AAGPGAHEQTDLFTCAVGGFVFEVDVQGFDVMVYRRVPAEEPGGQFP"
     gene            1800..>2484
                     /locus_tag="VK429_00755"
     CDS             1800..>2484
                     /locus_tag="VK429_00755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012934336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HLN90368.1"
                     /translation="MATTLAPSESYSITMRLEIQNKVGMLGKVTTAIGEVGGDIGAVD
                     LSGHGKGTVIRDVTARARGIDHAQEIINTVKAIPGVKVVNVSDRTFLMHLGGKIEVHP
                     KVPIKTRNDLSMAYTPGVARVCMAISKDVKKSFALTIRRNAVAVVSDGTAVLGLGDIG
                     PEAAMPVMEGKAMLFKEFGGIDAWPICLNTKDPEEIIRIVKALEPTFGGINLEDISAP
                     RCFEIEERLK"
BASE COUNT          450 a          791 c          849 g          394 t
ORIGIN      
        1 gccacgggca cttcgcccat cgtgtagtcg ggccggggca ccacggcggc ctccttcacg
       61 gaggggtgct cacagaggat gttctcgatc tcccgcggcg agatcgagat cccctcgacc
      121 gtcaccgtgt cccgtttccg gtcgacgatg tagatgtacc cctcctcgtc gacggaggcc
      181 acgtcccccg tccgaagcca gccgtcccgg aggaccttcg cggtgagggc cggatcgttc
      241 cggtacccct cgaacacgtt cggtccgcgc gccacgatct cgcccacctc gttcggggcg
      301 atctcccggc cgtcctcgtc gaccacccgg acctcgacgc cgatcgcctc ttttccgacg
      361 gacatgagct tccgcatgta gggggtgctc tcgtccagcg agtgatcctc ctcgtgcagg
      421 accgtcagga tgccggcggt ctccacctgg ccgtgtgact gggcgaggcc gcaccggaag
      481 aaccggatgg cgcgctttag caggtccagc gggatcaccg ccccgccgta caggacggtc
      541 ctcaatgtgg aaaggttgaa cttccccgcg gaggggaagg cgaggatctg cgccatcatc
      601 gtcggggtga ggagcacccg cgtgacggac cggcgctcga tcgcgcgcag cgcctcctcc
      661 gggtcgaact cgggctgcag gacgatcgtc gcccccacgt agaggaaccg aaggagccgt
      721 cccgtcccgc cgaggaaggg gaggtgggcg cacgaaagga agacgtcgtt ccgcgagagg
      781 gaaagctcga gcgccgagga ggcggaggcg gccagcaggt tccggtggaa gagcatcgcc
      841 ccccgtggac ggctcgatat cccgccgtcg tagatgatga gcgcgatgtc cgtctcgagg
      901 acgggtggag acgggtccgg gatgtcgtct ccccccctct tcggcaggtc cggatcgtcg
      961 atgcgcacga agcagccgat ccccggcagg gaagggcgga tctctccgac ccggccacgg
     1021 aactcctccg tgaaaaggag cgccttcacg tccgcgtcct cgaggatcgc gaccagttcc
     1081 cgcccgatca ggaggtggtt cagcggaacg agggcggcgc ccgcccgggt caccgcgaaa
     1141 agtgcctcca tgtagaggac ggagttctgc gcgaggatcg cgacgcggtc accactgccg
     1201 atcccccccg aacggagcac ggcggcgtag cctccgaccc ggtcgcgcag ttcccgatag
     1261 gtcacttcct ccttcgccga gacgagcgcg agccgggagg gatgggtgcg ggcgttgtgc
     1321 tcgaggacgt cctggatgag caatggatcc ctccgggttc cgcggcagac gggtgaattg
     1381 aaggtagcag acgggaaagg ttctttcaat cccgcgtggt agactggggc aaacggacat
     1441 ccggaagagg caagggatgg aattggacga tttcgatgtg tacccgatct accacaacgg
     1501 gcgcgtctac aacatcatca ccgccatgga ccttacgttc cgcgaggtgc gcgggatgat
     1561 cgacgcgctc gcagggatgg gggcgttcgc agccgggccc ggtgcgcacg aacagacgga
     1621 tctcttcaca tgtgccgtcg ggggattcgt cttcgaggtt gacgtccagg ggttcgatgt
     1681 gatggtctat cgccgcgtgc ccgcggagga acccgggggg caatttcctt gaattgcagg
     1741 ttccggccct cctagaatac ccggtgtatc cgcaccacca acccgcagag ggaggagtta
     1801 tggccacgac gcttgcccca agcgaaagct acagcatcac gatgcggctg gagatccaga
     1861 acaaggtggg catgctcggc aaggtgacca ctgcgatcgg cgaggtgggc ggcgacatcg
     1921 gcgccgtgga cctctccggc cacgggaagg gaacggtgat ccgggacgtc accgcgcggg
     1981 cccgcgggat cgaccacgcc caggagatca tcaataccgt gaaggcgatc ccgggggtca
     2041 aggtcgtgaa cgtctccgac cggaccttcc tgatgcacct gggggggaag atcgaggtcc
     2101 accccaaggt tccgatcaag acccggaacg acctctccat ggcgtacacc cccggcgtcg
     2161 cgcgcgtgtg catggcgatc tcgaaggacg tgaagaagtc gttcgcactc accatccgca
     2221 gaaacgccgt cgccgtcgtc tcggacggga ctgcggtgct ggggctgggc gacatcggcc
     2281 ccgaggcggc gatgcccgtc atggaaggga aggcgatgct gttcaaggag ttcggcggga
     2341 tcgacgcctg gccgatctgc ctcaacacga aggatcccga ggagatcatc cggatcgtca
     2401 aggcgctcga gcccacgttc ggggggatca acctcgaaga catctccgcg ccgcgctgct
     2461 tcgagatcga ggagcggctg aagg
//
LOCUS       DATGYW010000059         2274 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_58420, whole genome shotgun sequence.
ACCESSION   DATGYW010000059 DATGYW010000000
VERSION     DATGYW010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2274
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58420"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1185
                     /locus_tag="VK429_00760"
     CDS             <1..1185
                     /locus_tag="VK429_00760"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLN90369.1"
                     /translation="GWGIHVTTVDRSAQAFARIVGSSNTGTPFDFILVVGVGLDIDTA
                     GFARAVRSDSTIQESRLILVTGAEVGGENVGAEGYSATLPSPVDKRMLFNALHYSRAG
                     TQADGLPVDNLAEKYRRKRTGVRKLRVLVAEDNRTNQMVIGKILERAGHDFKIVANGE
                     EVLDALKEEKFDIGLLDLHMPVMGGIEAAKLSRFILQGSPRMPIVALTADATPEARAE
                     CEEAGMDACLTKPIDTRKLFDLFETLVPGGVVRTGPEAGAPEGRETAASVPEGPEEPA
                     CLDPRYLQELSDLGGNSDFVVRLAWTFLKGSKEKVRGLERAVADRDVEMARELAHALK
                     GNSGQIGALALMLACERFSGIAAGELERNGEAYLDVVKEELARARTALDEYLGTRNSA
                     VS"
     gene            complement(1213..2103)
                     /locus_tag="VK429_00765"
     CDS             complement(1213..2103)
                     /locus_tag="VK429_00765"
                     /inference="COORDINATES: protein motif:HMM:NF006452.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HLN90370.1"
                     /translation="MNVIPSCLTGLPSGYRHLSTRLDAQHGVFWCIMNPKDRSCFTIE
                     LLEELRAVEMDLEERYAGNSRPEDLPFRYFIFASGTPGVFNYGGDLELFIRCVNSMDA
                     AGLRRYARLCIDVLHSYFMNFNLPITTISLVQGDALGGGFEAALGGDVVIAEKSAQFG
                     FPEVLFNLFPGMGAYHFLSRRIGMARTERMFLGGKTYRAEELLGDGVLDIVAEDGKGE
                     NALYDYIGKHSRKKHVYESLFKIRRSVFPVRHEQMMEISELWVETAMRIGPREIRLMD
                     RLIRAQRRTPAPARTLERVL"
BASE COUNT          453 a          661 c          737 g          423 t
ORIGIN      
        1 gggtggggaa tccacgtcac aacagtggac cggtccgccc aggcgttcgc ccggatcgtc
       61 ggctcctcga acacgggaac ccccttcgac ttcatcctcg tcgtcggggt gggactggac
      121 atcgacactg ccgggttcgc ccgtgccgtc cggtccgatt ccacgatcca ggagagccgg
      181 ctcatccttg tgactggagc ggaagtcggc ggagagaatg tcggggcgga agggtacagt
      241 gccaccctcc cgtcgccggt cgacaagagg atgctcttca acgccctgca ttattcgcgc
      301 gccgggaccc aggcggacgg tctcccggtg gataatctcg cggagaagta ccggcggaag
      361 aggacgggcg tacggaagct gcgcgtcctg gtggccgagg acaaccggac gaaccagatg
      421 gtgatcggga agatcctcga acgggccggg cacgatttca agatcgtggc gaacggggaa
      481 gaggtcctcg atgccctgaa ggaggaaaag ttcgacatcg ggctcctcga cctccacatg
      541 ccggtgatgg gaggcatcga ggcggcgaag ctgtcccggt tcatattgca gggctcccca
      601 cggatgccga tcgtggcgct cacggcggac gcgacgccgg aggcgcgggc ggagtgcgag
      661 gaggcgggga tggacgcgtg ccttacaaag cccatcgata cgcggaaatt gttcgacctc
      721 ttcgagacgc tggttcccgg gggtgttgtg cggacgggtc cggaagcagg cgccccggaa
      781 ggaagggaga cggcggcatc cgtgcccgag gggccggagg aaccggcatg cctcgacccg
      841 cggtatcttc aggagctgtc ggacctcggc ggaaacagcg atttcgtggt tcgactggcg
      901 tggaccttcc tcaagggatc gaaggagaaa gtccgggggc tcgagcgggc cgtggcggat
      961 cgcgacgtcg aaatggcccg cgaactggcg cacgcgttga aggggaattc ggggcagatc
     1021 ggcgcgctcg cgctgatgct ggcatgcgag cggttttccg gcatcgccgc gggggagctg
     1081 gaacgaaacg gggaagccta cctcgatgtg gtgaaggagg aactcgcccg cgcccggacg
     1141 gcgctggacg aatacctggg aacccggaac tccgccgtct cctgaccggt cagccgctcc
     1201 cggtccccgg tgtcacagga ctctttcgag cgtcctggcg ggtgcggggg ttcttcgctg
     1261 cgccctgatc aaacggtcca tcaggcggat ctcccgcggg ccgatccgca tcgcggtctc
     1321 cacccatagt tcggagatct ccatcatctg ctcatggcga accgggaaga cgctgcgtct
     1381 gatcttgaac agggattcgt aaacatgttt cttccgggaa tgcttcccga tgtaatcgta
     1441 aagtgcgttc tccccctttc cgtcctctgc cacgatatca agcacaccgt ccccgagaag
     1501 ttcttcggcg cggtacgttt tgccaccgag gaacatccgc tcggtccgcg ccatcccgat
     1561 ccgccgggac aggaagtggt aggctcccat ccccgggaac aggttaaaca ggacctcggg
     1621 gaacccgaac tgcgcgctct tctcggcgat gacgacgtct ccccccagag cggcttcgaa
     1681 accgccgccg agagcatcgc cctggacgag ggagatggtg gtgatcggga gattgaaatt
     1741 catgaagtag gagtgcagca cgtcgatgca caaacgtgcg taacgacgaa gtccggcggc
     1801 gtccatcgaa ttcacgcacc ggatgaacaa ttcgagatcg ccgccgtagt tgaacacccc
     1861 cggagtcccg gatgcgaaga tgaaatagcg gaatgggagg tcttcgggac gggagttgcc
     1921 ggcgtacctc tcctccaggt ccatctccac cgcccggagt tcttcgagaa gttcgatggt
     1981 gaagcacgaa cggtccttgg gattcatgat gcaccaaaag actccatgtt gggcgtcgag
     2041 ccgggtggaa aggtgtcgat accccgaggg caaacccgtc aggcatgaag gtattacatt
     2101 catgatgtcc tgtaactctc tttttcccga gggaattttt tttgcctggt acggagcgga
     2161 taatagcacg tgtttcttgt aaagcaaata aaacaaaata ttcttttttc aattagtgaa
     2221 aatgtttttc catcccccga ttcttccctc cccgccccat tgtaacgaga tggc
//
LOCUS       DATGYW010000060         1827 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_326078, whole genome shotgun sequence.
ACCESSION   DATGYW010000060 DATGYW010000000
VERSION     DATGYW010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326078"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..848
                     /gene="fabG"
                     /locus_tag="VK429_00770"
     CDS             129..848
                     /gene="fabG"
                     /locus_tag="VK429_00770"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015838078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HLN90371.1"
                     /translation="MIDFLNLEGRIAVVTGGARGIGLAITRALVDHGVRVHVFDVAPG
                     KGDDAAPYSFHQADIADSASVAKAVAGLPAGVSLLVNNAGITRDRSAVNMSDDEWDSV
                     LSVNLTGAFHMIRALAPGMRKAGYGRIVNITSINGIRGKFGQANYCASKAGLIGLTKT
                     LARELGPKGITVNAVAPGMVMTEMALALPPEFVDKAKAEAVLPELAAPEDVANAVLFL
                     LSDAARRITGEVIRVDAGQYV"
     gene            848..1675
                     /locus_tag="VK429_00775"
     CDS             848..1675
                     /locus_tag="VK429_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007780229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HLN90372.1"
                     /translation="MRIDFHVHMGVYAFHNPWVTEWMKESYPGGNEEYEKYIRKYDDP
                     GAFEELLAAEGVDYACVLAELSDSTTGLCTNEQVRDFCRGRRRLIPFCDISPNRYQDP
                     GGELRRKVEDEGFRGVKLYPSYQHYYPNEQRMYPLYQAAQDLGVPVMFHVGSSVFRGT
                     RMKYCDPLHLDDVAVDFPDLNLVMAHAGRGFWYDRAFFLAKLHANLHLEISGLPPSKL
                     MTYFPELGRLAGKVIFGSDWPGMRWIRRNMEAIGKLPLPAEGVEGILGGNAARLLRL"
BASE COUNT          334 a          560 c          641 g          292 t
ORIGIN      
        1 cgataacttg ccatcgaagc cgatgccggc gcaacccatt cttcgattct cccggcgggg
       61 ctccttgaca ggcgagaacg caatggggta cttggatacg taattacctg tcaccgagcg
      121 agggagccat gatcgatttc ctgaacctgg agggacggat cgcggtcgtg accggcggcg
      181 cccgcgggat cgggctggcg atcacccgcg ccctggtcga tcacggagtc cgcgtgcacg
      241 tgttcgacgt cgcccccggg aagggggacg acgcggcgcc gtattcgttc caccaggccg
      301 acatcgccga ctccgcgagc gtggcgaagg cggtggccgg gcttcccgcc ggcgtctcgc
      361 tgttggtgaa caacgccggc atcacccgcg atcgcagcgc ggtcaacatg agcgacgacg
      421 agtgggattc cgtgctctcg gtcaacctga cgggggcgtt ccacatgatc cgggcgctgg
      481 cgccggggat gcggaaggcc ggatacgggc ggatcgtgaa catcacctcg atcaacggga
      541 tccgcgggaa gttcggccag gcgaactact gcgcctcgaa ggcgggcctg atcgggctga
      601 cgaagaccct cgcgcgggaa ctgggtccca aggggatcac ggtcaacgcc gtcgcccccg
      661 ggatggtcat gacggaaatg gcgctggcgc ttccgcccga attcgtcgac aaggcgaagg
      721 cggaggccgt gctgccggag ctggccgctc ccgaagacgt cgcgaacgcg gtccttttcc
      781 tcctgtccga cgcggcccgc aggatcaccg gcgaagtgat ccgggtcgac gccgggcaat
      841 acgtctgatg cggatcgatt tccatgtcca catgggggtg tacgccttcc ataacccctg
      901 ggtgacggag tggatgaagg agtcgtaccc cggggggaac gaggaatacg agaaatacat
      961 ccggaagtac gacgaccccg gggccttcga ggaactgctg gcggccgagg gggtggacta
     1021 cgcctgcgtg ctggccgaac tgagcgattc caccacgggg ctctgcacga acgagcaggt
     1081 gcgcgatttc tgccggggac gacgccggct gatccccttt tgcgacatca gccccaaccg
     1141 gtaccaagat cccggagggg agctccggcg gaaggtggaa gacgagggct tccggggggt
     1201 gaagctctac ccctcgtacc agcactacta tccgaacgaa cagaggatgt acccgctgta
     1261 ccaggcggcg caggacctgg gggtccccgt catgttccac gtcgggtcgt cggtcttccg
     1321 cgggacccgg atgaagtatt gcgacccgct gcacctcgac gacgtggcgg tcgatttccc
     1381 ggacctgaac ctggtgatgg cgcacgccgg ccgcggtttc tggtacgacc gggccttctt
     1441 cctcgcgaag ctgcacgcga acctccacct ggagatctcc ggcctgcccc cgtcgaagct
     1501 gatgacgtat ttcccggaac tgggccggct tgccggaaag gtgatcttcg gcagcgactg
     1561 gccggggatg cggtggatcc ggcgcaacat ggaagcgatc gggaagttgc cgctgccggc
     1621 ggaaggggtg gaggggatcc tcggcggcaa cgccgcgagg cttctgcgtc tctaacgctt
     1681 caacacataa atacggcgat gtatcgggaa gacagcacgg aaggcgcact caacggggtg
     1741 gtccggcgga gtcgccgcag gagggggggc gcagtgaggt aaagcgcagc cgtgcaggtt
     1801 catcgcacgg cgagccacga acggagc
//
LOCUS       DATGYW010000061         2695 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_162740, whole genome shotgun sequence.
ACCESSION   DATGYW010000061 DATGYW010000000
VERSION     DATGYW010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162740"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VK429_00780"
     CDS             <1..196
                     /locus_tag="VK429_00780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012525341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HLN90373.1"
                     /translation="GESPDPTVEKYPVRFDIDMLRCVFCGMCVEACPCDAILMDTGWF
                     TPPDDTREKLIFTIDTLLEK"
     gene            204..692
                     /locus_tag="VK429_00785"
     CDS             204..692
                     /locus_tag="VK429_00785"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HLN90374.1"
                     /translation="METILFILFGAIAVCGAILVVTRKNPMASALYLILTLFAVAALF
                     VLRQAHFLAAVQVIVYAGAVVVLFVFVIMLINVPEDRLPVERATTTRVLGFLAAGFFI
                     LETALLARRSSMPRGPAAEVGTVETVGRALLTDYLLAFEITSVLLLAAVIGAIALAKR
                     KI"
     gene            709..1011
                     /gene="nuoK"
                     /locus_tag="VK429_00790"
     CDS             709..1011
                     /gene="nuoK"
                     /locus_tag="VK429_00790"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HLN90375.1"
                     /translation="MISPSAYLLLSAILFGIGVVGVVARKNVLIILMSVELMLNGVNV
                     AFVAAGSYLGDAAGGVFAFMVMTVAAAEAAVGLALLIALYRLKETVDITELKVLKW"
     gene            1005..>2695
                     /gene="nuoL"
                     /locus_tag="VK429_00795"
     CDS             1005..>2695
                     /gene="nuoL"
                     /locus_tag="VK429_00795"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005141.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HLN90376.1"
                     /translation="MVSGILDYLWLVPALPLLGVVLNGAIALFAERPFLLKEAGLPLP
                     GGSHGPSAHGTSSSPSDAHSGSHGNGTHGASSAADSHGHGDSHGGHHETPSYRKWVAF
                     IAPGVVGAAFVVALLCVLSLASRPADGRTFVQILFPWIQAGSLLVPAALQLDPLSSVM
                     ALVVTGVGFLIHVYSVGYMSHERAFARYFVYLNLFMFAMLTLVLANNYLLMFVGWEGV
                     GLCSYLLIGFWYEKQSASDAGKKAFIANRVGDFGVLLAMFLVFWTFGSLSYTEVFAKV
                     PLLRESGVLTTGLATAITLLLFLGATGKSAQIPLYVWLPDAMEGPTPVSALIHAATMV
                     TAGVYMVARSSALFLLAPDTMMVVAVIGAVTAIFSATIGICQTDIKRVLAYSTVSQLG
                     YMFLACGVGAFTAGIFHLMTHAFFKALLFLGSGSVIHALSGEQDMQKMGGLRKYVPVT
                     FATMFAATLAIAGIPGLSGFFSKDEILWQSFSSPHGSPALWVIAALAAGITAFYMFRL
                     VFLTFFGESRMDPEVEKHAHESPWTMTVPLTILAVLSVAGGWIGIPAVLGGSNLF"
BASE COUNT          355 a          909 c          894 g          537 t
ORIGIN      
        1 gggggagtcg cccgacccga cggtcgaaaa gtacccggtc cggttcgaca tcgacatgct
       61 ccggtgcgtc ttctgcggca tgtgcgtgga ggcgtgcccg tgcgacgcga tcctgatgga
      121 caccgggtgg ttcacccccc cggacgacac ccgggagaag ctcatcttca cgatcgacac
      181 gctgctggag aagtagggga gcgatggaaa cgatcctctt catcctgttc ggcgcgatcg
      241 cggtctgcgg ggcgatcctg gtggtgacgc ggaagaaccc gatggcgtcc gcgctctacc
      301 tgatcctcac gctgttcgcg gtggcggcgc tgttcgtgct gcgccaggcc cacttcctcg
      361 cggcggtcca ggtgatcgtc tacgcggggg cggtggtggt gctgttcgtc ttcgtcatca
      421 tgctcatcaa cgtgccggag gaccgcctgc ccgtggagcg tgcgacgacg acgcgcgtgc
      481 tgggattcct cgccgcgggc tttttcatcc ttgaaaccgc gctgctggcg cgccggtcct
      541 cgatgccgag gggtccggcg gccgaggtgg gaacggtgga gaccgtgggg cgggcgctgc
      601 tcaccgacta cctgctcgcc ttcgagatca cctcggtgct tctcctggcc gcggtgatcg
      661 gggcgatcgc cctggcgaag aggaagatat gaaacggtgg aactcgggat gatctccccg
      721 tcggcatacc tgctcctctc ggcgatcctg ttcgggatcg gcgtcgtggg ggtggtggcg
      781 cgcaagaatg tgctgatcat cctgatgagc gtcgagctga tgctgaacgg cgtgaacgtg
      841 gcgttcgtcg cggccggctc gtacctgggc gacgccgccg gcggggtctt cgccttcatg
      901 gtgatgaccg tggcggcggc cgaggcggcg gtcgggctcg cgctgctgat cgcgctgtac
      961 cggctgaagg aaacggtcga catcacggaa ctcaaggtcc tcaaatggtg agcggcattc
     1021 tcgactacct gtggctggtc ccggcgctcc cgctgctggg ggtcgtgctc aacggcgcga
     1081 tcgccctgtt cgcggagcgg ccgtttctgc tgaaggaggc ggggctgcct ctcccgggag
     1141 gctcccatgg accttcagcc catgggactt cgtcctcgcc gtcggatgcc cactcgggct
     1201 cgcacggcaa tgggacacat ggcgcttcct cggccgccga cagccatggc catggggatt
     1261 cccatggcgg tcaccatgaa acgccttctt accggaaatg ggtcgccttc atcgcccccg
     1321 gggtggtcgg cgcggccttc gtggtggctc tcctgtgcgt gctgtcgctc gcctcccgcc
     1381 ccgcggacgg acggaccttc gtgcagatcc tcttcccctg gatccaggcg gggtcgctgc
     1441 tcgtcccggc ggcgctgcag ctcgacccgc tctcctcggt gatggccctg gtcgtcaccg
     1501 gggtcgggtt cctcatccac gtctactccg tggggtacat gtcccacgag cgcgccttcg
     1561 cccggtactt cgtctacctc aacctgttca tgttcgccat gctcaccctg gtccttgcga
     1621 acaactacct gctgatgttc gtcgggtggg agggcgtggg cctctgctcg tacctgctga
     1681 tcggcttctg gtacgagaag cagagcgcct ccgacgcggg gaagaaggcg ttcatcgcga
     1741 accgggtcgg cgacttcggc gtcctcctcg cgatgttcct cgtcttctgg accttcggct
     1801 ccctctccta cacggaggtc ttcgcgaagg tcccgctgct ccgggagagc ggggtcctga
     1861 ccaccggcct cgccacggcg atcaccctgc tcctgttcct cggcgccacc ggcaagtccg
     1921 cgcagatccc gctgtacgtc tggcttcccg acgcgatgga gggccccacg ccggtgtcgg
     1981 cgctcatcca cgcggccacg atggtcaccg ccggcgtcta catggtggcc cgttcgagcg
     2041 cccttttcct cctggccccc gacacgatga tggtcgtggc ggtcatcggc gcggtcaccg
     2101 cgatcttctc ggccacgatc ggcatctgcc agaccgacat caagcgggtc ctggcgtact
     2161 ccaccgtgtc gcagctgggg tacatgttcc tcgcctgcgg cgtcggggcg ttcaccgccg
     2221 ggatcttcca cctgatgacg cacgccttct tcaaggcgct cctcttcctc gggtccgggt
     2281 ccgtgatcca cgccctctcc ggggagcagg acatgcagaa gatggggggg ctcagaaaat
     2341 acgttcccgt caccttcgcc acgatgttcg ccgcgacgct ggcgatcgcg gggatcccgg
     2401 ggctgtcggg cttcttctcc aaggacgaga tcctgtggca gtcgttctcg tcgccccacg
     2461 ggagcccggc cctgtgggtc atcgcggcgc tcgcggcggg aatcacggcg ttctacatgt
     2521 tccggctcgt cttcctcacc ttcttcggcg aatcccgcat ggaccccgag gtggagaagc
     2581 acgcccacga gtccccctgg acgatgaccg tgccgctgac gatcctcgcg gtcctgtccg
     2641 tcgccggcgg gtggatcggg atcccggcag tcctgggcgg cagcaacctc ttcga
//
LOCUS       DATGYW010000062         1986 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_2143, whole genome shotgun sequence.
ACCESSION   DATGYW010000062 DATGYW010000000
VERSION     DATGYW010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1986
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2143"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..1562
                     /locus_tag="VK429_00800"
     CDS             165..1562
                     /locus_tag="VK429_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013908400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HLN90377.1"
                     /translation="MKKSLLIAEDEEVTLALLRTVFGRPDLLIHEARTGEEALQHIDQ
                     HPVDVILTDLKMPGADGLSVLAHARKVRPGAEVILMTGHASVETAVRAMKLGAFHYIT
                     KPFDIDEVAQLVDRALELTSVRRENVSLRSLARGRGSLENFIGVSDATKEVLSLVRKV
                     ADTDSTVLITGESGTGKELIARALHYLSPRADRMLVPINCSAIPAELLESELFGHMKG
                     AFTGAHATRAGKFETAHNGTIFLDEIAEMSPPLQAKLLRVLQEKSVTPVGGNRAIQVD
                     ARVIAATNKDLEEEVSEGRFRSDLYFRLNVIPIRIPPLRDRRDDIPLLVEHFLGKYNR
                     EKGRALAGVRPESLEILRRYTWPGNVRELENLVERIVVLKGSGWLEPSDIPEKIRRAE
                     RFLENALPVLGETGLDIRSATEDFENALIRQALHLSGGNKNRAATLLGLKRTTFVEML
                     KRKSLDAGEAPGPVS"
     gene            1559..>1986
                     /locus_tag="VK429_00805"
     CDS             1559..>1986
                     /locus_tag="VK429_00805"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HLN90378.1"
                     /translation="MISLRSRIADIVAGTDLSAEQREEILRRLETCLDALVRAGTAER
                     DERIEALSTRVRQAEEQLAQSQKMEAIGRLTGGIAHDFNNLLTGILGYSSLLKAFLPE
                     NGRGYEAATYIERSARRASELTRQLLAYSRRETSTFRPVDL"
BASE COUNT          360 a          671 c          657 g          298 t
ORIGIN      
        1 ccgcccggcg cgtctcgtcg agcagcgcgc cccacttccc ccgatcggaa accttcaatg
       61 cccctccgtt ccgccaccgg cggcacggtg gccgcacagt cctcttatcg acaggggaga
      121 tcggaaactt tacccggggg ggacgattct gtacactgga cccgatgaaa aaatccctcc
      181 tgatcgcaga ggacgaggag gtcacgctcg ccctccttcg gaccgtgttc gggcgccccg
      241 acctcctgat ccacgaggcc cgaaccgggg aggaagccct ccagcacatc gatcagcacc
      301 ccgtcgacgt gatcctcacc gacctcaaga tgccgggggc ggacgggctc tccgtgctcg
      361 cccacgcccg gaaagtacgt ccgggagccg aggtgatcct catgacgggc cacgcgtcgg
      421 tcgaaaccgc cgttcgggcg atgaaactgg gcgcgttcca ctacatcacg aaaccgttcg
      481 acatcgacga ggtcgcccag ctcgtggacc gggccctcga gctcaccagc gtgcgcaggg
      541 aaaacgtgag cctccgctcc ctggcccgcg ggcgggggag cctggaaaac ttcatcggcg
      601 tgagcgacgc gacgaaggag gtcctctccc tcgtccggaa ggtggccgac accgactcca
      661 cggtcctgat cacgggggag agcgggacgg ggaaggagct gatcgcgcgg gcgcttcact
      721 acctttcgcc gcgtgccgac cggatgctcg ttcccatcaa ctgctccgcc atccccgccg
      781 aactgctcga gagcgagctc ttcgggcaca tgaagggggc gttcacgggg gcccacgcca
      841 cgcgtgcggg aaaattcgag acggcccaca acgggacgat cttcctcgac gagatcgcgg
      901 agatgagccc cccgctgcag gcgaagctgc tccgggtgct gcaggagaag tcggtcaccc
      961 ccgtcggggg aaacagggcg atccaggtgg acgcgcgcgt catcgcggcg accaacaagg
     1021 atctggagga ggaggtctcc gaggggaggt tccgctccga tctctacttc cgcctgaacg
     1081 tgatcccgat ccggattccg ccgctccggg accggcgcga cgacatcccc ctgctggtcg
     1141 aacacttcct cgggaagtac aaccgggaga aggggcgggc gcttgcgggg gtgcgtccag
     1201 aatccctcga gatcctgcgg cgctacacct ggccggggaa cgtccgggag ctggagaacc
     1261 tcgtcgagcg gatcgtcgtc ctcaagggat cgggatggct cgagccgtcg gacatcccgg
     1321 aaaagatccg gagggcggaa cggttcctcg agaacgccct ccccgtgctg ggggagaccg
     1381 gcctcgacat ccggagcgct accgaagatt tcgagaacgc cctcatccgc caggcgctgc
     1441 atctttccgg cgggaacaag aaccgtgcgg ccaccctgct gggtctgaag aggacgacct
     1501 tcgtggagat gctgaagcgg aagagcctcg acgccggcga ggcccccggc cccgtgagtt
     1561 gatctcgctc cgatcccgaa tcgcggatat cgtcgccggg acggatcttt ctgcggaaca
     1621 gcgcgaggag atcctccggc ggctggaaac gtgcctcgac gcattggtgc gcgccgggac
     1681 cgcggagcgg gacgagcgga tcgaggcgct ttcgacccgc gtccgccagg ccgaggagca
     1741 gctggcgcag tcgcagaaga tggaggcgat cgggcggttg accggcggaa tcgcccacga
     1801 cttcaacaac ctcctgaccg ggattctcgg ctactcttcg ctcctcaagg cgttcctccc
     1861 ggaaaacggc cgggggtacg aggcggccac ctacatcgaa cggtcggctc gccgcgcctc
     1921 cgagctgacc cggcagctgc tcgcctattc acggcgggag acctcgacat tccgtccggt
     1981 ggatct
//
LOCUS       DATGYW010000063         1860 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_326410, whole genome shotgun sequence.
ACCESSION   DATGYW010000063 DATGYW010000000
VERSION     DATGYW010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326410"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VK429_00810"
     CDS             complement(<1..216)
                     /locus_tag="VK429_00810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011696934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HLN90379.1"
                     /translation="MHHFQVRNGEMHCEKVPLRRIARDVGTPVYVYSHATLAHHYRVF
                     DEAFGGIPHIICFSMKSNSNGSVIRTFT"
     gene            complement(221..361)
                     /locus_tag="VK429_00815"
     CDS             complement(221..361)
                     /locus_tag="VK429_00815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90380.1"
                     /translation="MSLARSALALLLLLAVLGSAAGCGRKAMPEPRKSGSSSAATLIG
                     AR"
     gene            complement(361..1734)
                     /gene="argH"
                     /locus_tag="VK429_00820"
     CDS             complement(361..1734)
                     /gene="argH"
                     /locus_tag="VK429_00820"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013178241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HLN90381.1"
                     /translation="MAKKKAWGGRFDGETDRFAEEFTASIPYDILLYRHDIAGSIAHA
                     RMLGKRGILPKAEAERIVKGLLAIRGEIESGKFSFDLSDEDIHMAIERRLIRRIGPVG
                     GKLHTGRSRNDQVATDLRLYLRDEIDEILRLLAEIEETVVSRAEELFGIVLPGYTHLQ
                     RAQPILFSHYLLAYREMFARDADRFMETRRRVNVSPLGAGALAGSTFPLDRAITARDL
                     GMDGVCENSVDAVSDRDFAADFLYACAVTMMHLSRLAEEMVYWSSSEFRFLSLPDALC
                     TGSSIMPQKKNPDVAELIRGKTGRAYGNLTNLLTLMKGLPLAYNRDMQEDKEPVFDSA
                     RTVKDCLTGANLLLRGMAVNEERMRAACDDGFLTATDLADYLAKKGVPFRKAHEITGR
                     IVRRCEERGARLKDLSLKELRAFSKVIGEDVRSAISLTNSVRLRKTRGGTGADAVRDR
                     LTSLRKK"
BASE COUNT          306 a          635 c          581 g          338 t
ORIGIN      
        1 ggtgaaagtc cggatgacgg atccgttcga gttcgacttc atcgagaagc agatgatgtg
       61 cggaatcccg ccgaacgcct cgtcgaagac gcggtagtgg tgggcaaggg tcgcgtggct
      121 gtacacgtac acgggggtcc ccacgtccct ggcgattcgc cgcagcggga ccttctcgca
      181 gtgcatctcc ccgttcctga cctggaaatg atgcatcggt tcacctcgcc ccgatcaggg
      241 ttgccgccga cgaacttccg cttttccgcg gctccggcat cgccttgcgc ccgcaccccg
      301 cggcggatcc gagcactgcc aacaggagga gcagcgcgag cgcagatcgc gcaagcgaca
      361 tcactttttc cggagcgacg tcaggcggtc ccggaccgca tcggcgcccg tccccccacg
      421 cgtctttcgc aggcgcacgg aattggtcag ggagatggcg ctgcggacgt cctcgccgat
      481 caccttcgaa aacgcacgga gctccttgag gctgagatcc ttgagccgcg ccccgcgttc
      541 ctcgcatcgc cggacgatcc tccctgtgat ctcgtgagcc ttgcggaacg gcaccccctt
      601 cttcgcgagg tagtccgcaa ggtcggtggc cgtgaggaac ccgtcgtcgc aagccgcccg
      661 catccgctcc tcgttcaccg ccatcccccg gagcagcaga ttcgccccgg tgaggcaatc
      721 cttcacggtg cgggccgaat cgaagaccgg ctccttgtcc tcctgcatgt cccggttgta
      781 cgcgagcgga agccccttca tgagggtgag gaggttcgtg aggttcccgt aagcgcgccc
      841 ggtcttcccc cggatgagtt cggccacatc ggggttcttc ttctgcggca tgatgctgct
      901 ccccgtgcac agggcgtccg gcagggagag gaagcgaaac tccgaggagg accagtacac
      961 catctcctcg gcgagccgcg acaggtgcat catcgtcacg gcgcacgcgt acaggaagtc
     1021 ggcggcgaag tcgcgatccg acacggcgtc gacgctgttc tcgcaaaccc cgtccatccc
     1081 cagatcccgc gccgtgatcg cccggtccag ggggaacgtg gaaccggcca gcgcccccgc
     1141 cccgagcgga gagacgttca cgcgccggcg cgtctccatg aaccggtcgg cgtccctggc
     1201 gaacatctcc cggtacgcca ggaggtagtg ggagaagagg atcggctgcg cccgctgaag
     1261 atgggtgtag ccgggaagga cgatcccgaa cagctcttcc gcccgggaga cgacggtttc
     1321 ctcgatctcc gcgaggagcc ggagaatctc gtcgatttca tcgcgcaggt acagccggag
     1381 atcggtggcg acctggtcgt tgcggctgcg ccccgtgtgc agctttcccc cgacggggcc
     1441 gatcctgcgg atcagccgac gctcgatcgc catgtggatg tcctcgtcgg agagatcgaa
     1501 ggaaaatttc cccgattcga tctccccgcg gatcgccagc agtcccttga cgatccgctc
     1561 cgcctcggcc ttcggcagga ttccccgctt ccccagcatc cgcgcgtggg cgatgctgcc
     1621 ggcgatgtcg tgccggtata gcaggatgtc gtacgggatc gaagcggtga actcctcggc
     1681 gaaccggtcg gtctcaccgt cgaagcgtcc cccccaagcc ttctttttcg ccatgtcagc
     1741 ctttcccgct cttcaacatc gaccggatct tgaggcgcag cgcgttgatc ttgatgaacc
     1801 cggtcgcgtc cgcttggttg aacaccgcct ccttctcgaa ggtcgcgaag tcggtccggt
//
LOCUS       DATGYW010000064         2678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_58838, whole genome shotgun sequence.
ACCESSION   DATGYW010000064 DATGYW010000000
VERSION     DATGYW010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58838"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..1194
                     /locus_tag="VK429_00825"
     CDS             175..1194
                     /locus_tag="VK429_00825"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012501669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HLN90382.1"
                     /translation="MNIEELEAVARSLVAPGKGILAADESAPTIEKRFKAIDLPSTEE
                     NRRAYRDLLFTTQGISEFISGVILYDETIRQRSADGTPFTKVLERQGIIPGIKVDEGA
                     KALIGFPGEKITEGLDGLRGRLPEYRTLGARFAKWRAVIDIGEGIPTRYCIQANAHAL
                     ARYAALCQEAGLVPIVEPEVLMDGSHTIERCEEVTTEVLSLVYAELTAHRVALEGTLL
                     KPNMVVSGNGCPDQAGVPQVAEATVRTLRRVVPCAVPGIVFLSGGQTPRQATEHLNAM
                     NAMGSHPWELSFSYGRALQDPVLRAWKGQAANVPAAKKAFFHRSKLNGAARNGKYSPD
                     MEEVA"
     gene            1262..>2678
                     /locus_tag="VK429_00830"
     CDS             1262..>2678
                     /locus_tag="VK429_00830"
                     /inference="COORDINATES: protein motif:HMM:NF017197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF748 domain-containing protein"
                     /protein_id="HLN90383.1"
                     /translation="MPGGLQKVWSKPFVRKGLIAGGAAVLVYTLFGFLALPAILKSIL
                     SKTLSETLHRKAELREIRVNPLDLSVSVRGLAISERDAPGTWISAEEIFANFQLASVI
                     QGGAVLSEVRVTHPFVNIVRRKDGSYNFSDLIEEFTKKRAESKEGRLLKLSLNNIRIF
                     DGSIDFDDAPKKTHHAVRGIQVGIPFLSNFRYYVEQYVHPSFSAVVNGKRISLKGKTK
                     PFSESLETTFDVNISNLDIPYYLEYVPVRRDYVISSAFLDVNVVVTFTQHKEKPPTLS
                     AKGDVILREVRVLGKDKSPMVHLPMVKAVIYPSDLAARDFRLTSLQVRDPEIDVSKDR
                     NGKFNILSLITEKQKDNSTERRGGKTSSKEEPGAVKEQNFTVDSIRMSGGKIRFADAS
                     LGSPFKTALGELRVDVDGLGTEEGKKADARFSFSTDSGETLELKGNLSLFPLGSEGTV
                     ALAKVLLKKYAPYYGSAVRFDI"
BASE COUNT          565 a          784 c          837 g          492 t
ORIGIN      
        1 aggtgggccg gcggcacatc gggcagacga gcccccgctc cgtggagtag accatcaccg
       61 ggtcgtcccg tcgtcccgcc acgtctttcc ctcctgcagt cgatcttcga cgacccgatc
      121 gcatatgata ataaatgaag cgggatcgga aaacgactcg ggaggaacct ggagatgaat
      181 atcgaagaac tcgaagcggt cgcacggtcc ctcgtcgccc ccggcaaggg gatcctggcg
      241 gcggacgaga gcgcgccaac gattgagaaa cggttcaagg cgatcgatct accctccacg
      301 gaggagaacc ggcgtgcgta ccgggatctc ctcttcacga cccaggggat ttccgagttc
      361 atcagcggcg tgatccttta cgacgaaacg atccggcaac gctccgccga cgggacgccg
      421 ttcacgaagg tgcttgaacg gcaggggatc ataccgggga tcaaggtcga cgagggggcg
      481 aaggcgctga tcgggttccc cggggaaaag atcaccgagg gtctggacgg gttgcggggg
      541 cgcctgccgg aatatcggac gctgggcgcc cgtttcgcaa agtggcgcgc ggtgatcgac
      601 atcggggaag ggatcccgac gagatactgc atccaggcca acgcccacgc gctggcccgt
      661 tacgccgcgc tatgccagga agcggggctc gttcccatcg tcgaaccgga ggtgttgatg
      721 gacgggtccc acacgatcga gcgttgcgaa gaagtgacca cggaggtgct ctcgctggtc
      781 tacgcggagc ttacggccca tcgcgtggcg ctcgagggta cgctgctgaa accgaacatg
      841 gtcgtttcgg ggaatgggtg tccggaccag gctggcgtgc ctcaggtcgc cgaggcgacg
      901 gtccggacgc tcaggagggt agtgccgtgc gcggtcccgg ggattgtttt tctttccggt
      961 ggccagacgc cgcggcaggc cacggagcac ctgaacgcca tgaacgccat ggggagtcat
     1021 ccgtgggaac tcagcttctc ctacggcagg gcattgcagg atccggtgct tcgggcgtgg
     1081 aaggggcagg cggccaacgt cccggcagcg aagaaggcgt ttttccaccg gtccaagctg
     1141 aacggtgcgg cccgcaacgg caaatactcc cccgatatgg aggaggtcgc gtaggcatac
     1201 cccatccccc cggatggatg tatgatcgcg gcaggagacc gcgtgcaggg gggggcgtcc
     1261 catgccagga gggctgcaaa aggtctggtc gaaacccttc gtgcggaagg gattgatcgc
     1321 ggggggggcc gcggttctgg tctataccct cttcggtttc ctcgctctcc ccgccatcct
     1381 caaatccatc ctttcgaaaa ccctctccga aacgctccac cggaaggccg aactccgcga
     1441 gattcgggta aaccctctcg atctgtccgt ctccgtccgg ggactcgcga tctcggagcg
     1501 ggacgccccg ggcacctgga tttccgcgga ggagatcttc gcgaacttcc agttggcgtc
     1561 ggtgatccag ggaggcgccg tcctcagcga ggttcgggtc acccatccct tcgtcaacat
     1621 cgtccggcgc aaggacggct cctacaactt ctcggatctg atagaggaat tcacgaaaaa
     1681 acgtgcagaa tcaaaagaag ggaggttatt gaaattatcg cttaataaca tacggatttt
     1741 cgacgggagc atcgatttcg acgacgcccc gaagaaaaca caccacgcgg tccgtgggat
     1801 ccaggtcggc atcccgttcc tgtcgaactt caggtattat gtcgagcagt acgtgcatcc
     1861 ttccttctcc gcggtggtga acggaaagcg gatctcgctc aaaggaaaga ccaagccgtt
     1921 cagcgagtcg ctggaaacca ccttcgacgt gaacatctcg aacctcgaca ttccgtacta
     1981 cctcgaatac gtcccggtgc gtcgggatta cgtgatttcc tccgcgttcc tggacgtgaa
     2041 cgttgtcgtt acattcacgc agcataagga gaaaccgccc accctctctg cgaaagggga
     2101 cgtaatcctg agggaggtcc gcgtcctggg gaaggacaag agccccatgg tccacctccc
     2161 catggtgaag gcggtgatct acccctcgga ccttgccgca cgcgatttcc gcctgacgtc
     2221 cctgcaggtg cgggatcccg aaatcgacgt ctccaaagat cgaaacggaa agttcaatat
     2281 tttgtcttta attacagaaa aacaaaagga taattctacg gagagaaggg gggggaagac
     2341 ctcatcgaaa gaagagccag gtgcagtaaa ggaacagaac ttcaccgtcg attccatccg
     2401 gatgtccggg ggaaagatcc ggttcgccga cgcctcgctt ggatcccctt tcaagactgc
     2461 gttgggagaa ctccgggtcg acgtggacgg ccttggcacc gaggagggta agaaggccga
     2521 cgcccggttc tccttttcga ccgattccgg ggagacactg gaactcaagg gaaacttgtc
     2581 ccttttcccc ctgggctcgg aaggaacggt cgccctcgcg aaggtgctcc tgaagaagta
     2641 cgcaccgtac tatgggagcg ccgttcggtt cgacatca
//
LOCUS       DATGYW010000065         1624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_58848, whole genome shotgun sequence.
ACCESSION   DATGYW010000065 DATGYW010000000
VERSION     DATGYW010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58848"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            48..1022
                     /locus_tag="VK429_00835"
     CDS             48..1022
                     /locus_tag="VK429_00835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013706328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLN90384.1"
                     /translation="MLRYIARRLLLTVPLLVGISLVSFLMMHMAPGGPIGAGTDMNPK
                     ATAESRTRLRAYYGLDQPLHVQYGRWLGQMATLDFGDSFSPDGRSVAEKIKERIPITL
                     TINVLSMGLIFVVAIPVGVYSAVRKGSLFDRISTVAVFTGFAIPTFWLALLMMILFGV
                     KLGWLPISGISSLDHESLGTLGRIADRGRHLVLPVLLAGFGGLAGMSRYMRSNMLEVI
                     RQDYIATARAKGLPERTVVFRHAMRNALLPVITILGLSVPDLLGGSVIFETIFAIPGM
                     GQLFYQGVMSRDYPLIMGILTIGAFLTLLGNLLADVGYALADPRIRQG"
     gene            1201..>1624
                     /locus_tag="VK429_00840"
     CDS             1201..>1624
                     /locus_tag="VK429_00840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011417169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease"
                     /protein_id="HLN90385.1"
                     /translation="MNGSRFIGRAFARRLLRNRLAAAGGAVILFFFLVSALPGLFASH
                     EPNRIDIVNILRPPSEAHPLGTDDLGRDVLARVVYGARVSLKVGFVAVGIATVLGLLV
                     GLLSGFYGGWVDAVLMRIVDMMLCFPTFFLILSVIAFLE"
BASE COUNT          211 a          549 c          540 g          324 t
ORIGIN      
        1 agccgctcca gaagcaccaa gtccagccgt gatgccgtag ggacgcgatg ctccggtata
       61 tcgcgcggag gctcctgctg accgtccccc tcctcgtcgg gatcagcctc gtctcgttcc
      121 ttatgatgca catggctccc ggggggccga tcggcgcggg gaccgacatg aatccgaagg
      181 cgacggcgga gtcgcggacg cggctcaggg cgtattacgg cctcgaccag ccgctccacg
      241 tccagtacgg gcggtggctc ggccagatgg cgacgctgga tttcggcgac agcttctccc
      301 ccgacgggcg gtcggtggcg gagaagatca aggaacggat cccgatcacg cttacgatca
      361 acgtcctgtc gatggggctg atcttcgtgg tcgccatccc cgtgggggtc tactcggcgg
      421 tgcggaaggg atccctcttc gaccggatct ccacggtggc cgtcttcacc gggttcgcca
      481 tccccacctt ctggctcgcg ctgctgatga tgatcctctt cggggtgaag ctcgggtggc
      541 tcccgatctc cgggatctcg tcgctggacc acgagtcgct cgggacgctc gggcggatcg
      601 ccgaccgcgg gcggcacctg gtccttcccg tcctgctggc ggggttcggg ggactggcgg
      661 ggatgtcgcg gtacatgcgg tcgaacatgc tcgaggtgat ccggcaggac tacatcgcga
      721 ccgcacgggc caaggggctc cccgagagga cggtcgtctt ccgtcacgcg atgcggaacg
      781 cccttctccc ggtgatcacg atcctcgggc tgtcggtgcc cgacctgctc gggggctcgg
      841 tgatcttcga gacgatcttc gcgataccgg ggatgggcca gctgttctac cagggggtga
      901 tgtcgcggga ctaccccctg atcatgggga tcctgacgat cggcgcgttc ctcaccctcc
      961 tcggcaacct gctggcggat gtggggtacg ccctcgccga tccgcggatc cggcaagggt
     1021 gagcccggtg tcccgtctcg caaatatctt ggcattcgaa cgccgctgca tccgctccgg
     1081 ctgcgttgca ctccctcgcc gtactttcaa gtacgcctcg gtcgcgcgcc ttgccgggcg
     1141 cggcgcatcg acgttctcgg tgcttcaagc tctttgcgag acggggcacc gggctcacct
     1201 atgaacggat cgcggttcat cgggcgcgcc ttcgcgcgga ggcttctccg gaaccggctg
     1261 gcggcggccg gcggcgccgt catcctcttt ttcttcctcg tctcggccct gccgggactc
     1321 ttcgcctcgc acgagccgaa ccggatcgac atcgtgaaca tcctgcgccc cccctcggag
     1381 gcacacccgc tcgggacgga cgatctgggg cgggacgtcc tcgcccgggt ggtctacggc
     1441 gcccgcgtct ccctgaaggt cgggtttgtc gcggtcggga tcgccaccgt gctggggttg
     1501 ctcgtggggc tcctgtcggg cttctacggc ggctgggtcg atgcggtcct gatgcggatc
     1561 gtcgacatga tgctctgctt cccgaccttc ttcctcatcc tgtccgtgat cgccttcctc
     1621 gaac
//
LOCUS       DATGYW010000066         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_326501, whole genome shotgun sequence.
ACCESSION   DATGYW010000066 DATGYW010000000
VERSION     DATGYW010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326501"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..74
                     /locus_tag="VK429_00845"
     CDS             <1..74
                     /locus_tag="VK429_00845"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: protein motif:HMM:NF013494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HLN90386.1"
                     /translation="RTHSIRGLHENDFIMAAKVNRLL"
     gene            338..1243
                     /locus_tag="VK429_00850"
     CDS             338..1243
                     /locus_tag="VK429_00850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006826779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphosulfolactate synthase"
                     /protein_id="HLN90387.1"
                     /translation="MEHDTERSFGFLHINERGGKPRRTGVTEIRGPYYSPLGKRALLD
                     IFETMGAYVDVLKFAGGSFALMPERAVRELIDTCHSHDILVSTGGFIEHVLTMGPAAV
                     DGYLEECKRLEFDIVEVSSGFISIPDDDLVRLVEKVRNLGMLPKPEVGIQFGAGGASS
                     AAELEAEGISDPSRAIRQAKRYLEAGAHLVMIESEGITEQVTSWRTEVPARFINELGL
                     DKVMFEAADPEVFSWYVKSYGPEVNLFVDHSQIVQLECLRSGIWGTKSTWGRVVTYKG
                     SGKSVPAEVSPVRHIATHPKARGAV"
     gene            1240..>2279
                     /locus_tag="VK429_00855"
     CDS             1240..>2279
                     /locus_tag="VK429_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003860267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HLN90388.1"
                     /translation="MTPYRSAAAWRLDEPRTQAERLASFVSRANWALISPAAREALKI
                     RVLDSLGCAYGAITGEPVRMLRKQVDEFGGKPLCTLIGGGRSAPDRAAFYNGALVRYL
                     DYNDSYLAKGETCHPSDSLGAVLAAAEYAGVPGKEFLTALAVAYQVQCRLSDTAPIRA
                     RGFDHVTHGVIAAAAGSAKALRLDPPRIANAVAIAGTANNALRVTRTGELSHWKGLAA
                     PNAGAAGLQAAFLAMRGITGPREMFEGAKGWMHVVSGPFEIDWEGENLERVNRTILKK
                     YNAEIHSQSAIEGMIGLMAEGGRTAAEIERIRIDIFDVAHLIIGGGAEGDKTAVRTKE
                     EADHSLPYIVAVA"
BASE COUNT          438 a          697 c          778 g          366 t
ORIGIN      
        1 tccggaccca ctcgatccgg ggcctgcacg aaaacgattt catcatggcg gcgaaggtca
       61 accgcctcct atagacgggg tcactgccgt catgaacggt cccctgctga ttcgcctcct
      121 gccccccgaa cagctcgcgc ctccaatctc tttggcgccg aaggcccgtc ggtagaaatc
      181 gatggcgcga tcggctcccc gcaccgtcag attacgtcga ctcggcaatc tgcgccgtcg
      241 cgcaggaaag tttggccatg gcgaaacggc ccgatttgcc ggcttcatct tatgtaaaag
      301 ggacgagaag aaaccggctt gaggaggagg gagttccatg gagcacgata ccgaaaggag
      361 tttcgggttt ctccacataa atgagagggg cggcaagcca cgtcggaccg gcgtcacgga
      421 gatccggggt ccgtattact cccccctggg aaagcgggca ctactggata tcttcgagac
      481 gatgggggcc tatgtcgacg tgctcaaatt cgccgggggc tcttttgcac tgatgccgga
      541 gagagccgtg cgtgaactga tcgacacctg tcattcgcat gacattctgg tgtcgaccgg
      601 ggggttcatc gagcacgtcc tgacgatggg gcccgcagcc gtggacgggt acctcgagga
      661 gtgtaaacga ctggaattcg acatcgtgga agtgtccagc gggttcatct cgatccccga
      721 cgacgacctc gtccgcctcg tggagaaggt acggaacctg ggcatgctcc cgaagcccga
      781 ggtcggcata cagttcgggg ccggaggcgc cagctcggcg gcggagctcg aagccgaggg
      841 gatttccgac ccgtcccgcg cgattcgcca ggcgaagcgg tacctggagg cgggagcgca
      901 cctcgtgatg atcgaatcgg aggggatcac tgagcaggtc acgtcgtggc gcacggaggt
      961 gccggcccgg ttcatcaacg aactcgggct ggacaaggtg atgttcgagg cggccgatcc
     1021 ggaggtgttc tcctggtacg tgaagtcgta cggcccggag gtcaacctct tcgtggacca
     1081 ctcccagatc gtccagctcg aatgcctgcg gtcggggatc tgggggacga agagcacatg
     1141 gggccgcgtg gtgacataca agggaagcgg gaaatccgtg cccgccgagg tgtcccccgt
     1201 gcggcacatc gcgacccacc cgaaggccag gggcgcagta tgacaccgta ccgcagcgcg
     1261 gccgcctggc gtctcgacga accccggacg caggcggaga gattggcctc gttcgtgtcc
     1321 agggcgaact gggcattgat ctccccggcc gcccgggagg cgctgaagat ccgcgtcctc
     1381 gattccctcg gctgcgcgta cggagcgatc acgggggaac ccgtgcggat gctgcggaaa
     1441 caggtggacg agttcggtgg aaagccgttg tgcaccctga tcgggggcgg gcgttccgcg
     1501 ccggaccggg ccgccttcta caacggggcg ctggtccgat acctggacta caacgacagc
     1561 tacctggcga agggagaaac atgccacccc agcgacagcc tcggagctgt actggcggcg
     1621 gcggaatacg ccggggtccc ggggaaagag ttcctcaccg cgctggcggt ggcgtaccaa
     1681 gtccagtgcc gcctctccga caccgcaccg atccgggcgc gcggtttcga ccacgtgacc
     1741 cacggtgtaa tcgccgccgc cgcgggttcg gcgaaagcgc tgcgcctcga tcccccacgg
     1801 atcgcgaatg ccgtggccat cgcaggcacg gcgaacaacg cgctgagagt aacccgcacc
     1861 ggagaactgt cgcactggaa agggcttgcc gccccgaacg ccggggccgc cggcttgcag
     1921 gccgccttcc tcgccatgcg gggtattacc ggtccgcggg aaatgttcga gggcgccaag
     1981 gggtggatgc acgtcgtttc gggtcccttc gaaatcgact gggaggggga gaacctggag
     2041 cgcgtcaacc ggaccatcct gaaaaaatac aacgcggaaa tccactccca gtcggccatc
     2101 gagggaatga tcgggctgat ggcggagggg ggccgtacgg ccgcggagat cgaacggatc
     2161 cggatcgaca tcttcgacgt ggcccacctg atcatcgggg gtggcgccga aggagacaag
     2221 acggcggtcc gcacgaaaga ggaggcggac cacagcctgc cgtacatcgt tgcggtggc
//
LOCUS       DATGYW010000067         2625 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_379512, whole genome shotgun sequence.
ACCESSION   DATGYW010000067 DATGYW010000000
VERSION     DATGYW010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_379512"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="VK429_00860"
     CDS             complement(<1..779)
                     /locus_tag="VK429_00860"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLN90389.1"
                     /translation="MPKKLLLVEDSLTIRKVFELALSRSDISITAVDNGEDAIRLAGE
                     ISPDLVVADLTLPGKNGFAVAVELRAREKTEKIPVLILSGTLVPLDEARFKASGARGV
                     LFKPFESRELLENIERILHEETPAPESRKPQEAPAVDERWDFSDVLDEVEADAGKSAA
                     RAPAAREGLLPGAILPGGGKVPPVFNEFDVSIDEIEERAREFSAEPPRPPLTVEHMDS
                     DHPVDSPPPVTDLSPALDEVEEIEEIEPLEDVEVPLPPTDAV"
     gene            complement(804..>2625)
                     /locus_tag="VK429_00865"
     CDS             complement(804..>2625)
                     /locus_tag="VK429_00865"
                     /inference="COORDINATES: protein motif:HMM:TIGR00358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016896 - RNA exonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HLN90390.1"
                     /translation="SYGRVERILERGIRTFVGRYAPKGDRSFVRFRDRESDLLLEVDL
                     PAGFSAEPGDLVLAEVAEYPEGGKEGRARLVRALGKSHTMETLFLAVTSAMDLPVAFP
                     DPVLEEAAAVPQSVRLSARGAGVCHGDEALPRVDQRELPFVTIDGKDARDFDDAVCLV
                     REGGGFRLFVAIADVAHYVKPGSPLDREAYLRGTSVYFPDRCIPMLPPELSEGVCSLK
                     PGVNRLAMTVEIPIRAAGTPGTPSFHPSVIRSRARLTYDEVHSFLGNGTPAGEGGKPG
                     GAKMTAEIGRMLRDMAVAGGGLTLARFGRGALDLDLPEAEIGVVEGMPVSVKPSERFE
                     SHRLIEEFMLLANTAVAEYLSGRGDAFLFRIHEEPAMQKIEEFEAAAGKLLRRSRPTD
                     RRDTSSLLRAWADLARGGKFERAVHRMLLRSLMLARYGPETKGHFGLALPRYTHFTSP
                     IRRYPDLLVHRVLKAALGDPGSADSLRILHEKGPEVGVHLSGRERLAMEAERALEQRA
                     KALFIGGKVGRTFEGTVSSIVSSGFFLELDGWMIDGMVHVSTLRDDEYRFSPDRMEWV
                     GQYRKRRIGLGDRVRVRVRRADPDRGEIDFLLVEKMPESP"
BASE COUNT          471 a          910 c          821 g          423 t
ORIGIN      
        1 acggcgtcgg tcggaggcag gggaacctcc acatcctcga gaggctcgat ctcctcgatc
       61 tcctccactt cgtccagcgc cggcgaaaga tcggtcacgg gcggaggtga atccaccgga
      121 tggtccgaat ccatgtgttc gaccgtcagc ggggggcggg gcggctccgc ggagaattcg
      181 cgcgcgcgct cttcgatctc gtcgatcgac acatcgaact cgttgaaaac gggagggacc
      241 ttcccacccc cggggaggat cgccccgggg agcagccctt cccgcgccgc cggtgcgcgc
      301 gccgccgatt tccccgcatc ggcctcgacc tcgtccagta cgtcgctaaa gtcccaacgc
      361 tcgtcgaccg ccggcgcctc ctgcggtttg cgggactccg gggccggcgt ttcctcgtgc
      421 agaatacgtt cgatgttctc cagcaattcc ctggattcga agggcttgaa aagcacgcct
      481 ctcgctccgc tcgccttgaa gcgcgcctca tcgagaggga ccagggtccc ggagaggatg
      541 aggacaggaa tcttttccgt cttctccctg gcgcggagtt ccacggcgac ggcaaaaccg
      601 tttttcccgg gcagcgtgag gtcggcgacc accaggtcgg gggagatctc tcccgcgagg
      661 cggatggcat cctccccgtt gtcgactgct gtgatcgaga tgtccgaacg ggagagggcg
      721 agctcgaaca ctttccggat ggtcagactg tcttccacaa gaagaagctt tttcggcatg
      781 gtcacccccg actgtccttc atattaagga gattccggca tcttttcaac cagcaggaaa
      841 tcgatctcgc ccctgtcggg gtcggcgcgg cgcacccgca cgcgcacacg gtcgccaagc
      901 ccgatccggc gtttccgata ttggccgacc cactccatcc gatccggcga gaaccggtat
      961 tcatcatccc gaagcgtcga gacgtgaacc atcccgtcga tcatccagcc atccagctcc
     1021 aaaaagaatc ccgaggagac gatggaggag acggtcccct cgaaggtgcg ccccacctta
     1081 ccccctatga acaacgcctt cgcccgctgt tcgagcgccc gctccgcctc catcgccagc
     1141 cgctccctcc cggaaaggtg gaccccgacc tccggtccct tctcatggag gatccgaagg
     1201 gagtcggccg atcccggatc cccgagcgcc gccttgagca cccgatggac gaggaggtcc
     1261 gggtagcggc ggatggggga ggtaaaatga gtataccgcg ggagggcgag cccgaaatgc
     1321 cccttcgtct cagggccgta acgcgcaagc atcaggcttc gcaagagcat cctgtggacc
     1381 gcccgctcga atttcccccc tcgcgcgaga tccgcccacg cccgcaaaag ggaagacgtg
     1441 tcgcggcgat cggtgggacg ggagcggcgc agaagcttgc ctgccgccgc ctcgaactcc
     1501 tcgatcttct gcattgcggg ctcctcgtga atccggaaga ggaaggcgtc gccgcggccg
     1561 gaaagatact cggccaccgc cgtgttcgca agcagcatga actcctcgat cagccggtgg
     1621 gattcgaacc gttccgacgg ctttacggag acgggcatcc cctccacgac gccgatctcc
     1681 gcctcgggca ggtcaaggtc gagggcgccg cgaccgaagc gcgcaagggt caatcctccc
     1741 cccgccaccg ccatgtcgcg cagcatccgc ccgatctccg cggtcatctt tgcgccgccg
     1801 ggctttcctc cctcccctgc gggagttccg ttcccgagaa aggagtgcac ctcgtcgtag
     1861 gtcaggcgcg cccggcttcg gatgacggaa gggtggaagg agggagtccc cggcgtcccc
     1921 gccgcccgga tcggaatttc gaccgtcatc gccagacggt tcaccccggg cttcaggctg
     1981 cataccccct ccgagagttc gggcggcagc atcggaatgc aacgatcggg gaagtagacg
     2041 ctggtgccgc ggaggtacgc ctcccggtca agaggcgacc ccggcttgac gtaatgggcg
     2101 acatcggcga tcgcgacaaa caggcggaaa ccgcccccct cacggacgag gcaaacggcg
     2161 tcgtcgaagt cccgggcatc cttcccgtca atcgtgacga acggaagttc cctctggtcg
     2221 acgcggggga gcgcctcgtc cccatggcac accccggcgc cgcgggcgga aagtcggacc
     2281 gactggggga cggccgccgc ctcctcgagc acagggtcgg ggaatgcgac gggtagatcc
     2341 atcgcggagg tcacggcaag gaaaagggtc tccatcgtgt gcgacttccc gagggcgcgg
     2401 accaggcggg cccgcccctc ctttccccct tcggggtatt cggcaacctc cgcgaggaca
     2461 aggtccccgg gttcggccga aaaacccgcc gggaggtcca cctcgaggag caggtcggac
     2521 tcccggtcgc ggaagcgcac gaaggaacga tcccccttcg gcgcgtaccg gccgacgaac
     2581 gtccggatcc cccgctcgag tatccgctcg acccgtccat acgac
//
LOCUS       DATGYW010000068         2049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_379818, whole genome shotgun sequence.
ACCESSION   DATGYW010000068 DATGYW010000000
VERSION     DATGYW010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_379818"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..87)
                     /locus_tag="VK429_00870"
     CDS             complement(<1..87)
                     /locus_tag="VK429_00870"
                     /inference="COORDINATES: protein motif:HMM:NF024207.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HLN90391.1"
                     /translation="MAQVRVGFLVDTSRCIGCRSCQVACKAWN"
     gene            complement(93..617)
                     /locus_tag="VK429_00875"
     CDS             complement(93..617)
                     /locus_tag="VK429_00875"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HLN90392.1"
                     /translation="MAQVRVGFLVDTSRCIGCRSCQVACKAWNHMDADKTVEKGSYEN
                     PTDLTPNLYNRIRFLESADDRGNVKWLFMNERCVHCGDAGCMKVCPAPGALHRTKEGI
                     VVFDKEKCIACKYCVSACPFNIPRYGADDKVTKCHLCFDRIGAGRLPACAQACPTQTL
                     QFGSRDALIAKAKG"
     gene            complement(623..>2049)
                     /locus_tag="VK429_00880"
     CDS             complement(623..>2049)
                     /locus_tag="VK429_00880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011940192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HLN90393.1"
                     /translation="KVRKAVSTLEWMVTVNLFDNETASFWKGPGVDPSKVNTEVFFLP
                     AAASFEKEGSVTNSSRMGQWRTAAIRPLGQSKPDAEIMNDLFFRLKALYASGGGAYPD
                     PLMNLTWNYGFKRADGTVRSVDIHAVAKEINGYFLDNVEEKPKPGQPAPKEKKLVGKK
                     GELAAGFAQLQADGTTSCGNWLYCQSYNEKGNMMARRVKKDPTGLGLFPEWAWAWPVN
                     RRILYNRASVDLAGKPYNVKKAVIYWNANAVLPDGKLGKWEGDVPDGPWPPMGDAKEG
                     KKPYIMRADGVAAIFGPGLKDGPFPEHYEPLECPVQENLLSKQRTNPASKMFSDGGLP
                     EDVYATCDTRYPYVATTYRVTEHWQTGVLSRNVPWLLELQPRQFVEMGLDLAKEKKIR
                     NGDLVEVSSARGKIEAVAIVTPRFRPFKVAGSTVHGVGLPWCFGWFTPGVGDSANLLT
                     PTAGDANTMIPETKAFMVNIKAKG"
BASE COUNT          308 a          724 c          635 g          382 t
ORIGIN      
        1 gttccacgcc ttgcacgcga cctggcagga gcggcaaccg atgcaacgcg acgtgtcgac
       61 gagaaatcca acgcgtacct gggccatggc ggtcacccct tcgccttcgc gatcaaggcg
      121 tcccggctcc cgaactgcag cgtctgggtc ggacacgcct gggcgcacgc cgggagcctg
      181 cccgccccga tccggtcgaa gcacaggtgg cacttggtca ccttgtcgtc cgcaccgtag
      241 cgggggatgt tgaacggaca ggcggagacg caatacttgc acgcaatgca cttctccttg
      301 tcgaagacga cgatcccttc cttcgtccga tggagcgccc ccggcgccgg gcagaccttc
      361 atgcaccccg cgtcgccgca gtggacgcac cgctcgttca tgaagagcca cttcacgttc
      421 ccccggtcgt ccgcactctc gaggaaccgg atccggttgt agaggttggg ggtcaggtcg
      481 gtcgggtttt cgtagctccc cttctcgacc gtcttgtccg cgtccatgtg gttccacgcc
      541 ttgcacgcga cctggcagga gcggcaaccg atgcaacgcg acgtgtcgac gagaaatcca
      601 acgcgtacct gggccatggc ggtcacccct tcgccttgat gttgaccatg aacgccttcg
      661 tttccgggat catggtgttg gcgtcccccg ccgtcggcgt gagcaggttg gcggagtcgc
      721 ccacccccgg cgtgaaccag ccgaagcacc aggggaggcc caccccgtgg accgtggagc
      781 cggccacctt gaaggggcga aaacgggggg tcacgatggc gaccgcctcg atctttcccc
      841 gggccgagga gacttcgacc aggtcgccgt tccggatctt cttctccttc gcaagatcga
      901 gccccatctc cacgaactgc cgcggctgca gctcgaggag ccacgggacg ttccgggaga
      961 ggaccccggt ctgccaatgc tcggtcaccc ggtacgtcgt ggcgacgtac gggtaccggg
     1021 tgtcgcacgt cgcgtacacg tcttccggca gccccccgtc ggagaacatc ttcgaggccg
     1081 ggttcgtccg ctgcttcgac agcaggttct cctggacggg gcactccagc ggctcgtaat
     1141 gctcggggaa cgggccatcc ttgaggcccg gcccgaagat cgcggccacg ccgtcggccc
     1201 gcatgatgta cggcttcttc ccctccttcg cgtcgcccat cgggggccac ggcccgtcgg
     1261 gaacgtcccc ttcccacttg ccgagctttc cgtcgggcag gacggcgttc gcgttccagt
     1321 agatgaccgc cttcttcacg ttgtacggct tccccgccag atcgaccgac gcccggttgt
     1381 agaggatgcg ccggttcacc ggccacgccc acgcccactc ggggaagagc cccaggcccg
     1441 tggggtcctt cttcacccgg cgggccatca tgttcccctt ctcgttgtag ctctggcagt
     1501 agagccagtt gccgcaggag gtggtgccgt cggcctgcag ctgggcgaac ccggcggcga
     1561 gttccccctt cttcccgacg agcttcttct ccttcggcgc cggctgcccc ggcttcggtt
     1621 tctcctccac gttgtccagg aagtagccgt tgatctcctt cgccacggcg tggatgtcga
     1681 ccgaccggac cgtgccgtcc gcccgtttga acccgtagtt ccacgtgagg ttcatgagcg
     1741 ggtcggggta ggcgcccccg cccgaagcgt agagcgcctt gagccggaag aagaggtcgt
     1801 tcatgatctc ggcgtcgggc ttcgactgcc cgagagggcg gattgccgcg gtccgccact
     1861 gccccatcct cgacgagttg gtgacgctcc cctccttctc gaacgacgcg gccgcgggga
     1921 ggaagaagac ctccgtgttc accttcgacg ggtccacccc cggccccttc cagaacgacg
     1981 ccgtctcgtt gtcgaacagg ttgaccgtca ccatccactc gagcgtggac accgcctttc
     2041 ggactttcc
//
LOCUS       DATGYW010000069         2250 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_112582, whole genome shotgun sequence.
ACCESSION   DATGYW010000069 DATGYW010000000
VERSION     DATGYW010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112582"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..529)
                     /locus_tag="VK429_00885"
     CDS             complement(<1..529)
                     /locus_tag="VK429_00885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020710830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90394.1"
                     /translation="MRNRHLILLVSILLATFLVAGCSGPRQVTKAETDQFNAISKKIA
                     EAEGMTPKSAKVCAPKELAAAKANLDAARHEAVEYWETPNQYIVAADKSADVVVAKTK
                     ACQPPIVKYSAAPAEIAPGQCSTLTWSLQNTQKAEIDQEVGAVPASGSKQVCPTKTTD
                     YILTATGTGGTVSETA"
     gene            complement(526..813)
                     /locus_tag="VK429_00890"
     CDS             complement(526..813)
                     /locus_tag="VK429_00890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90395.1"
                     /translation="MRRASIVLCAVMLIAGLSAGCATKNALESTRMSLDQAKAAGAEK
                     KAAYEYYMGEAYLGKAVYQAEKGDTKQAGIFNKQAADYSAQALQMSKGGAK"
     gene            complement(1119..1604)
                     /gene="moaC"
                     /locus_tag="VK429_00895"
     CDS             complement(1119..1604)
                     /gene="moaC"
                     /locus_tag="VK429_00895"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HLN90396.1"
                     /translation="MPFNHFDDGGRAVMVDVGAKEPTRRTAVARATVFMKRETVAAIA
                     TGGVKKGDVLGIARIAGIAAAKKTCDLIPLAHPIALTQASVDFEVEGERGTIVVTSTV
                     KAFDRTGVEMEAMVSASVAALTIYDMCKGEDRGISIGDVFLLSKEGGRSGVYRREDPR
                     V"
     gene            complement(1632..2090)
                     /locus_tag="VK429_00900"
     CDS             complement(1632..2090)
                     /locus_tag="VK429_00900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HLN90397.1"
                     /translation="MNPTGRIGPGARVAAVCVSERKGERKTPVPSVSLVADHGVLGDA
                     HAGDGHRQVSLLAAESIEKMRQKGLSVSAGDFAENVTTEGILLPELPVGARFRIGEAV
                     LEVTQIGKECHTRCAIYHQAGDCVMPREGIFARVVEPGKVSPGDVIERIP"
BASE COUNT          358 a          811 c          626 g          455 t
ORIGIN      
        1 ttgccgtctc ggaaacggtc ccaccggtcc cggtcgcggt caagatgtaa tcggtggtct
       61 tggtggggca tacctgcttg gaaccgctcg ccggcacggc tcccacctcc tgatcgatct
      121 ccgccttctg cgtattttgc aaagaccacg tcagggtcga gcactgtccg ggggcaatct
      181 ccgccggggc cgccgaatat ttcacaatgg gaggttgaca cgccttcgtc ttggcaacga
      241 ccacatcggc ggacttgtcc gcggcgacga tatactgatt gggcgtctcc caatactcga
      301 ccgcttcgtg gcgggcagcg tcaaggttcg ccttggcggc agccagttcc ttgggagcgc
      361 ataccttggc gctcttgggc gtcatcccct ccgcctcggc gatcttcttc gagatggcat
      421 tgaactggtc cgtttcagcc ttggtcacct gacgggggcc gctgcagcca gccaccagga
      481 acgtcgcgag aagaatcgac acgagaagta ttagatgccg gttcctcatt tcgcacctcc
      541 cttggacatc tgcagtgcct gggcggaata gtctgccgcc tgcttattga agatcccggc
      601 ctgcttcgta tccccttttt ccgcctggta aaccgctttc ccgaggtacg cctcccccat
      661 gtaatactcg tacgccgcct ttttctcggc tcccgcggct ttcgcctggt ccagcgacat
      721 ccgggtgctc tcgagagcgt ttttcgtcgc gcatccggcg gacagcccgg cgatcagcat
      781 caccgcgcat aagacaatcg atgctcgtct catcaacagc ctcctttcga tttgttttcg
      841 ctaccgaagt ccgtttccaa tacgtcaaag cacacgcaca cacacgtccc gaacaccccc
      901 tctctaacga atatcgcctc cgcctttcag gcaaccggct atttctatga gtggaatccg
      961 cattcatcct attaaatttt ccgggttgta tacaagcacg atttttccgc acggaatgac
     1021 gacggggtgc cgttgccaga tatagtgaca tttctgcggg ttcgagacac ggtccgcctt
     1081 gccgtttgac ccgaaaggcg cgctggtgcg aaccgccttc aaacgcgggg gtcttccctc
     1141 cggtacacgc cgctcctgcc cccctccttc gagagcagga agacgtcccc gatcgagatc
     1201 ccccggtcct cccccttgca catgtcgtag atcgtgagcg cggcgacgga cgccgagacc
     1261 atcgcctcca tctccacgcc ggtccggtcg aacgccttca cggtgctcgt gacgacgatc
     1321 gtcccccgtt cgccctccac ctcgaaatcg accgacgcct gggtaagcgc gatcgggtgg
     1381 gccagcggga tcaggtcgca cgtcttcttg gcggcggcga tccccgcgat ccgcgcgatc
     1441 ccgagcacgt cgcccttctt caccccgccg gtcgcgatcg ccgcgaccgt ctccctcttc
     1501 atgaagaccg tggcgcgcgc caccgccgtc cggcgcgtcg gctccttcgc ccccacgtcc
     1561 accatcacgg cccgcccgcc gtcgtcgaaa tggttgaacg gcattgcccc gctccttcct
     1621 cccccgtgcc cttacgggat ccgctcgatg acgtccccgg gagaaacctt gccgggctcg
     1681 acgacccggg cgaagatccc ctccctcggc atcacgcagt cgcccgcctg gtggtagatg
     1741 gcgcaccgcg tgtggcactc cttcccgatc tgcgtcacct cgaggaccgc ctccccgatg
     1801 cggaaccgcg cccccaccgg aagctccggc agcaggatcc cctcggtggt cacgttctcg
     1861 gcgaagtcgc cggccgacac ggagagcccc ttttgccgca tcttctcgat gctctcggcc
     1921 gccaggaggc tcacctggcg gtggccgtcg cccgcgtggg cgtcccccag caccccgtgg
     1981 tccgcgacga gtgaaaccga ggggaccgga gtcttccgtt ctcccttccg ctcgctgacg
     2041 cagaccgctg cgaccctcgc ccccggtccg atcctccccg ttgggttcat ccgcgtgccc
     2101 tccgggggat gattatctca cgggcatcgc gcggtacgca cacgcgggaa ttcaccggag
     2161 cgtttccccg agcaggaaga tgtccaccgt ttcccccgcg gcgaaggagg tcctgtcggc
     2221 cggaagaacg gcaagtgcgt cggcgagaac
//
LOCUS       DATGYW010000070         2903 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_112833, whole genome shotgun sequence.
ACCESSION   DATGYW010000070 DATGYW010000000
VERSION     DATGYW010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2903)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2903)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2903
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112833"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="VK429_00905"
     CDS             complement(<1..365)
                     /locus_tag="VK429_00905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HLN90398.1"
                     /translation="MARKRRKRYHPPGTQPGTLAAHAEAGDAPVRITSFLYDANRCEE
                     RTVSPSEVSSLSPPEGGVLWLDVSGLSDPAVVRVIGERFGFHTLALEDVLNVPQRPKV
                     EWYDEHLLVVLREIRYPEPA"
     gene            531..1778
                     /locus_tag="VK429_00910"
     CDS             531..1778
                     /locus_tag="VK429_00910"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HLN90399.1"
                     /translation="MKERNHGALAAALVLICLLAVAVYSCAVNPVTGRSELALVSFSE
                     EEEAALGAKAYTPAVQQQGGFYRDPALEEYVQGVGMRLARVSHRPNLDYRYRVLNSSV
                     PNAFALPGGFIVINRGLLVGLSSEAEMAAVLGHETGHVTAKHSLAGYQRAMAANVLVT
                     GVVLGTGGRAGVQELSGVTASLLENGFSRDQEREADWLGIDYMVKAGYNPEGAVRLQE
                     YFFTQLEGGKNPMWAEGLFRTHPFSKERLDNARARIAQQYPDTVKNPNYTFNETIFRQ
                     KTARLREVQKAYEIADQGDKLLKEKRYDEALERYREAERKEPAQSPFHSSAGQVYLAQ
                     KNYGAAEEELRKAIELDGEFFEPRLLMGALRYQQKEYRAAIPQLERSMDLYPTKTAAA
                     LLSKSYEAVGDAVNAKKYADMAR"
     gene            1817..>2903
                     /locus_tag="VK429_00915"
     CDS             1817..>2903
                     /locus_tag="VK429_00915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005997318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLN90400.1"
                     /translation="MKGILLAKEEFIPKWIAWEVTGRCNLNCIHCRASSSMTSHDSDF
                     SLPEAKQLIDDIAEISKPVLVLSGGEPLLRKDLFEIAKYGTEKGFRMCIATNGVLVTD
                     EVVGKMKASGIRICSLSLDGSTAAVHDDFRKQPGAFEATLRAAEIFNRNGMQFIVNSS
                     FTKRNQHDIAATCKLAKSIGAHAWYMFMIVPTGRGEAIMSELISKEDYEEILEWHYRM
                     EKQETEMLVRPTCAPHYYRVRLQKMKEEGEKFQPRSLTFSTGGGKGCICAQSICFIDS
                     KGNVQPCSYFPVVAGNVKQRKFGEIWHKSELFESLRDFGKYKGRCGECEYINVCGGCR
                     ARADAVLEDYLEEEPFCNYVPIKTRKRL"
BASE COUNT          568 a          885 c          983 g          467 t
ORIGIN      
        1 gcgggttccg ggtagcggat ctcccgcagc acgaccagaa gatgctcgtc gtaccactcc
       61 accttcgggc gttgcgggac gttcaacaca tcctccagtg cgagggtatg gaatccgaaa
      121 cgctccccga tcacgcggac gacggctggg tcggacagac cagagacgtc aagccacagc
      181 acccctccct ccgggggaga cagggaagag acctcggagg gggaaaccgt ccgctcctcg
      241 caccggttcg catcgtacag gaaggacgtg atccggaccg gcgcgtcccc cgcctcggca
      301 tgcgccgcga gggtcccggg ctgggtccca ggcgggtggt accgcttcct tcgttttctc
      361 gccatcggtc tcctcccggg tgcatgcctg tcatcggaaa cggtcccgcc cctctttata
      421 tcaaacttgc gggcggggta cagcggcggg tcggaggatc cttgtcgcct ctcgcggcag
      481 cgtggataat ggaacgacaa cccggaagtt cccgtgcgga gggaatcccc atgaaggagc
      541 gaaatcacgg agcactcgcc gcagcgctcg ttctgatctg tctgctcgcc gtcgctgtct
      601 acagctgcgc ggtcaacccg gtcaccgggc ggtccgaact cgcgctcgtc tccttctccg
      661 aggaggagga agcggcgctg ggcgcgaaag cgtacactcc cgccgtgcag caacagggcg
      721 gcttctaccg ggaccccgcc ctggaggagt acgtccaggg cgtcggaatg cggctggccc
      781 gcgtctccca ccgccccaac ctcgactacc ggtaccgggt gctgaactcc tccgtcccca
      841 acgccttcgc cctccccggc ggattcatcg tgatcaaccg ggggctcctc gtggggcttt
      901 cgagcgaggc ggagatggcc gcggtgctgg gacacgagac ggggcacgtg acggcgaagc
      961 attccctggc cggataccag cgggcgatgg cggcgaacgt tctcgtcacc ggggtcgtcc
     1021 tcgggacggg gggacgcgcg ggagtccagg aactgtcggg ggtcaccgca tccctcctcg
     1081 agaacggctt ctcccgcgac caggagcggg aggcggactg gctcggaatc gactacatgg
     1141 tcaaggccgg gtacaacccg gaaggggcgg tccggctgca ggaatatttc ttcacccagc
     1201 tggagggcgg aaagaacccc atgtgggccg aagggctctt ccgcacccac ccgttttcga
     1261 aggagcggct cgacaacgcc cgcgcccgga tcgcgcagca atatccggac acggtgaaga
     1321 acccgaacta caccttcaac gagacgatct tccgccagaa gaccgcgcgc ctgagggagg
     1381 tgcagaaggc gtacgagatc gcggaccagg gggacaagct cctcaaagag aaacggtacg
     1441 acgaggcgct cgaaaggtac cgggaggcgg agcggaagga gccggcgcaa tcgccgttcc
     1501 actcttcggc ggggcaggtg tacctggcgc agaagaatta cggggccgcg gaggaagagc
     1561 tgcgaaaggc gatcgagctc gacggggagt tcttcgagcc gcgcctcctg atgggcgcgc
     1621 tccggtatca gcagaaggag taccgggcgg cgatcccgca gctagagcga agtatggatc
     1681 tgtacccgac gaagaccgcg gcggccctgt tatcgaagtc gtacgaggcg gtgggggacg
     1741 cggtcaacgc gaaaaagtac gccgacatgg cacggtgatg ggatcctccg gggtataatc
     1801 ttttgttacc ccgattatga aaggaattct tttggccaag gaagagttca tcccgaagtg
     1861 gatcgcatgg gaagtgaccg gccgatgcaa cctgaactgc atccattgcc gcgcctcttc
     1921 ctcgatgacg tcgcacgact cggatttttc gctcccggag gcgaaacagc tcatcgacga
     1981 catcgcggag atctcgaagc cggtcctggt tctctcgggc ggggagccgc ttctgcggaa
     2041 ggacctcttc gagatcgcga agtacgggac ggagaagggg ttccggatgt gcatcgccac
     2101 gaacggcgtg ctcgtcacgg acgaggtcgt tggaaagatg aaggcgtcgg gaatccggat
     2161 ctgctccctg tcgctggacg gctccaccgc ggcggtccac gacgacttcc gcaagcagcc
     2221 gggggcgttc gaggcgacgc tgcgggcggc ggagatcttc aaccgcaacg ggatgcagtt
     2281 catcgtcaac tcctccttca cgaagaggaa ccagcacgac atcgcggcca cctgcaagct
     2341 ggcgaagtcg atcggcgccc acgcgtggta catgttcatg atcgtcccca cgggccgcgg
     2401 ggaggcgatc atgagcgaac tgatcagcaa ggaggattac gaggagatcc tggagtggca
     2461 ctaccggatg gagaagcagg agacggagat gctcgtacgg cccacctgcg cgccgcacta
     2521 ctaccgtgtc cgcctgcaga agatgaagga ggagggggag aaattccagc cccggtccct
     2581 gacgttctcc acgggcggcg gcaaggggtg catctgcgcc cagtcgatct gcttcatcga
     2641 ctcgaagggg aacgtccagc cgtgctcgta cttccccgtg gtggcgggga acgtgaagca
     2701 gcggaagttc ggggagatct ggcataaatc ggagctgttc gagtcccttc gcgacttcgg
     2761 gaagtacaag gggcggtgcg gcgagtgcga atacatcaac gtctgcggcg gatgccgggc
     2821 gcgggccgac gcggtactgg aggattatct cgaggaggag ccgttctgca actacgtccc
     2881 gatcaagacc cgcaagcgcc tgg
//
LOCUS       DATGYW010000071         1584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_59729, whole genome shotgun sequence.
ACCESSION   DATGYW010000071 DATGYW010000000
VERSION     DATGYW010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59729"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1341)
                     /locus_tag="VK429_00920"
     CDS             complement(<1..1341)
                     /locus_tag="VK429_00920"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013779933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HLN90401.1"
                     /translation="MAAKRVFFFGGGKAEGNGTMKDVLGGKGAGLAEMTNLGVPVPPG
                     FTISTEACNLYYRHRGKLPQDVKAEVAANLAKLERAIGKKLGDPKNPLLVSVRSGAKF
                     SMPGMMDTVLNLGLNDKTVEGLARLSKNPRFAYDSYRRFLMMFSDVVLNLPKSNFEHI
                     FDAKKQERGVAYDVDLTAEDLMDLCGKYKALVKERLKREFPQDPLVQLELARDAVFRS
                     WNNDRAKYYRKTNGIPDDIGTAVNVQAMVFGNMGDDCATGVGFTRNPATGAKEFYGEY
                     LINAQGEDVVAGIRTPHQIRDMRKELPKVFNQLMRITAKLEKHYKDVQDFEFTIEGNI
                     LYMLQTRNGKRTAAAAVKIAVDMVKEKLLTKEEALLRLEPQQIDQLLHPVIDPKAKLD
                     VIAKGLPASPGAATGAAVFHADRAVEWATEGKDVILVRKETSPDDIHGMDVARGI"
     gene            complement(1357..>1584)
                     /locus_tag="VK429_00925"
     CDS             complement(1357..>1584)
                     /locus_tag="VK429_00925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DALR anticodon-binding domain-containing
                     protein"
                     /protein_id="HLN90402.1"
                     /translation="GRVVAAARDGRYGEAFREMAGLQPLVAAFFEKVLVMAKDETVRN
                     NRLALLKGLSAVFASVADFSKVASSGQPKQG"
BASE COUNT          232 a          555 c          468 g          329 t
ORIGIN      
        1 gatcccccgc gccacgtcca tcccgtggat gtcgtcgggg ctcgtctcct tgcggaccag
       61 gatcacgtcc ttcccctcgg tggcccactc caccgccctg tcggcgtgga agaccgccgc
      121 gccggtcgcc gcgccggggg aggccgggag ccctttggcg atgacgtcaa gcttcgcctt
      181 cgggtcgatc accgggtgaa gcagctggtc gatctgctgg ggctcgaggc gcaggagcgc
      241 ctcctccttg gtgagcagct tctccttcac catgtccacg gcgatcttga cggccgccgc
      301 ggcggtccgc ttcccgttcc gcgtctggag catgtacagg atgtttccct cgatggtgaa
      361 ttcgaaatcc tgcacgtcct tgtaatgctt ctcgagcttc gcggtgatcc gcatcaactg
      421 gttgaagacc ttggggagtt ccttcctcat gtcgcggatc tggtgcgggg tgcggatgcc
      481 ggcgacgacg tcctcgccct gcgcgtttat cagatactcg ccgtaaaact ccttcgcccc
      541 cgtggcgggg ttccgcgtga agccgacgcc ggtggcgcaa tcgtccccca tgttgccgaa
      601 caccatcgcc tggacgttca cggccgtccc gatgtcgtcg gggatcccgt tcgtcttccg
      661 gtaatatttc gcccggtcgt tgttccacga ccggaacacc gcgtcccgcg ccagttccag
      721 ctggaccagc gggtcctgcg ggaactccct cttcaggcgc tccttgacca gcgccttgta
      781 ttttccgcac aggtccatca ggtcctcggc ggtaaggtcg acgtcgtagg ccacgccgcg
      841 ctcctgcttc ttcgcgtcga agatgtgttc gaagttgctc ttggggaggt tgaggacgac
      901 gtcggagaac atcatcagga agcgccggta ggagtcgtac gcgaaccgtg gatttttgga
      961 cagccgcgcg agcccttcga ccgtcttgtc gttcagcccg aggttgagga ccgtgtccat
     1021 catgccgggc atggagaact tcgcccccga ccggacggag acgagcagcg gatttttcgg
     1081 atcgccgagc ttcttgccga tcgcccgctc gagcttcgcg aggttcgccg cgacctccgc
     1141 cttgacatcc tgggggagct ttccccggtg cctgtaatac aggttgcacg cctcggtgct
     1201 gatggtgaac cccggaggaa ccggcacgcc gaggttcgtc atctcggcga gtcccgctcc
     1261 tttcccgccg aggacgtcct tcatcgttcc gttcccctcg gccttacccc ccccgaaaaa
     1321 gaagacccgt ttcgccgcca ttcgcctctc ctccgatcac ccttgtttcg gctgccctga
     1381 agacgccacc tttgaaaagt ccgccaccga cgcgaacacc gccgacagcc ccttcaggag
     1441 cgcaagccgg ttgttcctga ccgtttcgtc cttcgccatc acgagcactt tttcgaagaa
     1501 ggcggccacc agcggctgga gccccgccat ctcgcggaac gcctcgccgt accgcccgtc
     1561 gcgcgccgcc gccacgacgc ggcc
//
LOCUS       DATGYW010000072         1655 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_327145, whole genome shotgun sequence.
ACCESSION   DATGYW010000072 DATGYW010000000
VERSION     DATGYW010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327145"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            102..656
                     /gene="narJ"
                     /locus_tag="VK429_00930"
     CDS             102..656
                     /gene="narJ"
                     /locus_tag="VK429_00930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012468294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051131 - chaperone-mediated protein
                     complex assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HLN90403.1"
                     /translation="MSISDCYSSLARMLDYPGGKEGMAADCDMASKGLQGQGIESPLE
                     PFGRFVQTSTLARLQEEYVATFDFNPAVALYLGHHLFGDNRKKGAYLIRLKQEFGRHG
                     FTPPGNELPDHLPLVLGFLAYLAGNAEDGVRRSFISECVLPGVERLGASFSGRAESPW
                     KPVVEAAMLLCASDSAVPEEGKPC"
     gene            650..1339
                     /gene="narI"
                     /locus_tag="VK429_00935"
     CDS             650..1339
                     /gene="narI"
                     /locus_tag="VK429_00935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012468295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009325 - nitrate reductase complex
                     [Evidence IEA];
                     GO_function: GO:0008940 - nitrate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0019645 - anaerobic electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HLN90404.1"
                     /translation="MLNSFIFIVLPYVALALFLFVTPYRYFSNRLTWSAYSTQFLEQK
                     ELYWGSNPWHYGIIPVLIAHLVSVIAPGPMRTILGNQRVLILLEDVGQGLALLALFGC
                     LVLLVRRLRAPILRPVTSAGDWALLVLLLVEVATGVYMGVFIRGGPLWYLYTAVPYFH
                     SLLAFNPQIGYMADLPLVFKLHAAGSFLIVALLPFTKLVHLLYLPIGFLIDPPILYRW
                     RSSKAGEGADR"
     gene            1336..>1655
                     /locus_tag="VK429_00940"
     CDS             1336..>1655
                     /locus_tag="VK429_00940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015720763.1"
                     /note="involved in the transport of nitrate and nitrite;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite transporter"
                     /protein_id="HLN90405.1"
                     /translation="MTSRVLTVWNPEDSAFWEREGKAIASRNLWISIPALFLAFAVWM
                     VWSVVVVTLPTIGFGFDPDRLFWLAALPGLAGATLRIFYSFMVPIFGGRKWTTLSTAS
                     LLIPA"
BASE COUNT          264 a          519 c          511 g          361 t
ORIGIN      
        1 gagcggaacg tcatcccgtc ccagcagaga gaggagcagg atccgtacac ccgcaagggg
       61 gcgagcggct tcgggatact gaagagggcg gggaggggga aatgagcatc tcggattgct
      121 actcctccct ggcccgcatg ctcgattatc ccgggggtaa agaagggatg gcggcggact
      181 gcgatatggc gagcaagggc ctgcagggcc agggtatcga atccccgctg gaacccttcg
      241 gcaggttcgt gcagacctcg accctggcac ggctccagga ggaatatgtc gcgaccttcg
      301 acttcaatcc ggcggtcgct ctttacctgg ggcaccacct ctttggcgac aaccggaaaa
      361 agggagcgta cctgatccgc ctgaagcagg agttcggccg ccacgggttt acccctcccg
      421 gcaacgaact ccccgatcac ctgccgctgg tgctcgggtt ccttgcatac cttgcaggga
      481 acgcggagga cggcgtccgg cggtccttca tctcagagtg cgtgctgccg ggagtggaac
      541 gacttggcgc ctctttttcc ggccgtgcgg aatccccctg gaagccggtc gtcgaggcgg
      601 caatgctcct gtgcgcctcg gactctgcag ttccggagga gggcaagcca tgctgaattc
      661 ctttatattc atcgttctcc cctatgttgc gctggcgctg ttccttttcg tgacccctta
      721 ccggtacttc tcgaaccggc tcacctggtc ggcctattcc acccagtttc tggagcagaa
      781 ggaactctac tgggggagca acccgtggca ttacggcatt attccggtac tgatcgccca
      841 cttggtgagt gtgatcgcac ccggcccgat gaggacgatc cttggaaacc agcgagtcct
      901 gatcctgctg gaggacgtcg ggcaggggct agcgttgctg gccctgttcg gctgcctggt
      961 gcttctggtc cgtcgcctga gagcacccat cctgagaccg gtgacctccg ccggtgattg
     1021 ggctctcctg gttcttctgc tcgtcgaagt cgccaccgga gtttacatgg gagtcttcat
     1081 tcgcgggggc ccactctggt acctgtatac ggcggtcccg tacttccatt cgctcctggc
     1141 gttcaatccc cagatcgggt acatggccga cctccctctg gtgttcaagc tgcacgcggc
     1201 ggggtcgttc ctgatcgtcg ccctgttgcc gttcaccaag ctggtgcatc ttctctatct
     1261 cccgatcggc tttctcatcg acccgcccat tctttaccgc tggcggtcct cgaaggcggg
     1321 ggaaggagcg gaccgatgac gtcccgggtg ttgacggtct ggaacccgga agacagcgcg
     1381 ttctgggaac gggaagggaa ggccatcgcg agccggaatc tctggatctc catcccggcg
     1441 ctcttccttg ccttcgccgt ctggatggtc tggagcgtgg tggtcgtgac cctcccgacc
     1501 atcggtttcg gattcgatcc cgacaggctc ttctggctgg ccgcgctgcc cgggctggca
     1561 ggcgcgacgc tccgtatctt ctactccttc atggtgccga tcttcggagg acggaaatgg
     1621 accaccctta gcaccgcttc cctgctgatt ccggc
//
LOCUS       DATGYW010000073         1503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_380324, whole genome shotgun sequence.
ACCESSION   DATGYW010000073 DATGYW010000000
VERSION     DATGYW010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380324"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VK429_00945"
     CDS             complement(<1..185)
                     /locus_tag="VK429_00945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020888191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HLN90406.1"
                     /translation="MLTTGVAYALGGSPGGGAGGGGGLMGLLPILLMFVIFYFLLIRP
                     QQKQAAKQRDFIKNLKVG"
     gene            complement(208..1317)
                     /gene="tgt"
                     /locus_tag="VK429_00950"
     CDS             complement(208..1317)
                     /gene="tgt"
                     /locus_tag="VK429_00950"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: protein motif:HMM:TIGR00449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HLN90407.1"
                     /translation="MTLRFTVEARDGGTAARAGTISTDRGTLGTPAFMPVGTAGTVKG
                     VWPDQLREMGYGCILGNTYHLYLRPGPERIRGQGGLHRFMGWDRLILTDSGGFQVFSL
                     SALRKVSDEAVTFRSHLDGSAHTLTPELAVQVQEALGSDVRMALDECVEYPADRGEVE
                     EAVRRTTLWATRSLAARTFEGGGMFGIVQGGMFPDLRRRSVEEICALPFQGFAVGGVS
                     VGEGKELQRDTVAGTAPMLPASMPRYLMGVGTPADIFFAIAQGVDLFDCVLPTRNARN
                     GMMFTSAGPVSIKQARYADDSLPPDARCDCPTCRGFSRAYLRHLYLQREMLGSMAMTV
                     HNLHFYGQMMQRAREAICRGNFGELVKESVVSENE"
     gene            complement(1328..>1503)
                     /locus_tag="VK429_00955"
     CDS             complement(1328..>1503)
                     /locus_tag="VK429_00955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011002619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S-adenosylmethionine:tRNA
                     ribosyltransferase-isomerase"
                     /protein_id="HLN90408.1"
                     /translation="YRFRAVDALVTNFHLPRSSLLALVMAFSGVDALRAAYREAVVRE
                     YRFYSYGDAMFIS"
BASE COUNT          264 a          545 c          458 g          236 t
ORIGIN      
        1 cccaccttga gattcttgat gaaatcgcgc tgcttggccg cctgcttctg ctgcggacgg
       61 atcagaagga agtagaagat gacgaacatg agcaggatcg ggagaagtcc catcaggccg
      121 ccgcccccgc cggcaccacc gcccggggat ccgcccaacg cgtacgccac gccggtcgtc
      181 aacataaggg tttcgcctcc ttggccgtta ctcgttttct gaaacgactg attctttcac
      241 aagttccccg aaatttccac ggcaaatcgc ctcccgcgcc ctttgcatca tctgcccgta
      301 gaaatggagg ttgtggacgg tcatcgccat cgaccccagc atctcccgct ggagatagag
      361 gtggcgcagg tacgcgcggg agaagccgcg gcacgttggg cagtcgcacc gcgcgtccgg
      421 cgggagagag tcgtccgcgt accgggcctg cttgatcgag accggccccg cggaggtgaa
      481 catcatcccg tttcgcgcgt tgcgcgtcgg cagtacgcag tcgaacaggt ccaccccctg
      541 cgcgatcgcg aaaaagatgt ccgcgggcgt tcccaccccc atcaggtagc gcggcatgga
      601 agcgggaagc atcggcgccg tcccggccac ggtatcgcgc tggagttcct tcccctcccc
      661 gacgctcacc ccgccgacgg cgaatccctg gaacgggagg gcgcagatct cctcgacact
      721 gcgtcgccgc aggtccggga acatccctcc ctggacgatc ccgaacatgc cgccgccctc
      781 gaaggtccgc gccgcgaggg agcgggtcgc ccacaacgtc gtccggcgca ccgcctcttc
      841 gacctctccc ctgtccgccg ggtattccac gcactcgtcc agcgccatcc taacgtccga
      901 cccgagcgcc tcctgcacct gcaccgcaag ctccggagtg agggtgtgcg ccgagccatc
      961 gaggtgggac cggaacgtca ccgcctcgtc ggacaccttc cgcagagcgc tgagggagaa
     1021 gacctggaac ccgccgctgt cggtcaggat caggcggtcc caccccatga accggtggag
     1081 ccccccctgt ccccggattc gctcgggacc ggggcgcagg tacaggtgat acgtgttgcc
     1141 gaggatgcag ccgtacccca tctcccgcag ctggtccggc cagaccccct tgaccgtccc
     1201 cgcggttccc acgggcatga acgccggggt gcccagggtg ccccgatctg tcgagatcgt
     1261 gcccgcccgg gccgcggtgc cgccatcccg agcctctacc gtgaaccgga gcgtcaaagc
     1321 gccctcctca tgagatgaac atcgcgtcgc cataactgta gaagcggtat tcccgcacca
     1381 ccgcttcccg gtacgccgcc cgcagcgcgt cgacgccgct gaacgccatc accagggcga
     1441 gaagactcga acgcgggagg tggaagttcg tcacgagtgc gtcgacggcc cggaaccggt
     1501 agc
//
LOCUS       DATGYW010000074         4259 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_487408, whole genome shotgun sequence.
ACCESSION   DATGYW010000074 DATGYW010000000
VERSION     DATGYW010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4259
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_487408"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="VK429_00960"
     CDS             complement(<1..330)
                     /locus_tag="VK429_00960"
                     /inference="COORDINATES: protein motif:HMM:NF024833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper domain-containing protein"
                     /protein_id="HLN90409.1"
                     /translation="MIDAEKDVRWSMKITRAAFVGVLLLSAGCATNPDGSTEYKRTAV
                     GTLGGAAVGAGAGALIAGSGHRGTGALIGGVVGAAAGGAIGNYMDRQAAEVLVKYPDT
                     YITVEGHT"
     gene            complement(351..536)
                     /locus_tag="VK429_00965"
     CDS             complement(351..536)
                     /locus_tag="VK429_00965"
                     /inference="COORDINATES: protein motif:HMM:NF018096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1059 domain-containing protein"
                     /protein_id="HLN90410.1"
                     /translation="MLKFICFRDIDFDCDFEAWGETEEVLFRKVLEHGKVYHGMEYIP
                     TDLQERMRKRIREENAA"
     gene            complement(739..1512)
                     /locus_tag="VK429_00970"
     CDS             complement(739..1512)
                     /locus_tag="VK429_00970"
                     /inference="COORDINATES: protein motif:HMM:NF024498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HLN90411.1"
                     /translation="MKPFLSACVLAACLALLLTAPAAAFRKEAAAPGDCTECHKLTKE
                     EAGKILGKVVDNVVAVAPGPFAGVWEVDVARNGKTYPLFLDYSLKYLLSGQFIRLADM
                     TNLTSLRYQDLNRVDVASIPVQDAIRVGSTKAKKTVIVLSDPTCPYCVKLHGEIRKAA
                     AKDPDVAFLVMPYPRNPNDMATYRKCQAVVCSKSEKLLDDAYAGKALPEATCKTDAVD
                     ETIRLAKRLKIEGTPTMILPDGRMISGYMEVEALLALLR"
     gene            1710..3032
                     /locus_tag="VK429_00975"
     CDS             1710..3032
                     /locus_tag="VK429_00975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90412.1"
                     /translation="MGIRTTGGNLRKSLSPAFLAIACSLILSYLPTGPATAADVTVSS
                     KTYGLLYERELAGGQKDRYAPLYEYLSADAANLGGKPLSLHFYGWGRVDLGEQTGTGN
                     TSGEIGSLYLEYQHPEGNTQGKLGRFFLTEGAAMDTIDGAFVKATTPVGLGVSLYGGV
                     PVEYSTLENAKGGDSIFGGRVFFVRSGFAEIGASYLKESNASDALDRELYGGDLWVRV
                     AGPVELTAKAYYNDSAGEMASQRYAVRIVPNATFDITAGYEAYNYKGLFRSAVNPAFT
                     FPSVDNNDDVRTIFGIVDWEFTPGWTLEVAGKNIRHDLSDPGDANRGEIGLRHAYNGK
                     KDVAGLSAAFVSADRDENEYQEYRAFASYSPDKLRLTIDGLIQKYKQEINGKKNAYQV
                     VATAGYQIFAALQVSGNLTYTQSPNFENDYAGLVRVSYDLATSTGGKK"
     gene            3029..3499
                     /locus_tag="VK429_00980"
     CDS             3029..3499
                     /locus_tag="VK429_00980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HLN90413.1"
                     /translation="MMRRAHAANILGGILVTLLIGCSYTSTTPSVPPKHPEELPIGRV
                     NCLECHENVSTGAMKPYGTFRHSRVFIDSHGTYARQGQNLCASCHAPAFCQTCHAGKE
                     EIKPSTKMGDRPDRRAPHRGDYLVAHRIDGRLDPGSCFQCHGNKNDARCKQCHR"
     gene            3573..>4259
                     /locus_tag="VK429_00985"
     CDS             3573..>4259
                     /locus_tag="VK429_00985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90414.1"
                     /translation="MPGSRKKRPVRPFLLLSLLAALAFAAGCSDANTPGGESHIDASG
                     KSVSGWMVVPTVGSHSSTATQEYGSGSFSCTQCHGADLSGGINGVSCFGNPAGCHHDP
                     VAGWIADSPAAQNHGVSAKKAPGSSGFVSCKICHGNGFSGGGSKVSCFTCHGVNAPHP
                     AQPWRGSPYTHTNVDNANVPVCAQCHFPGSPNNPPNHPATPAPAGTAPGCLNNTLCHG
                     ENPVPHPVDNA"
BASE COUNT          783 a         1385 c         1304 g          787 t
ORIGIN      
        1 ggtgtgcccc tccaccgtga tgtaggtgtc cgggtatttc accagcacct ccgccgcttg
       61 cctgtccatg tagtttccga tggcgccacc cgcggctgcg cctacgacac cgccgatgag
      121 agcccccgtt ccgcggtgcc cgctgcccgc gatcaaagcc ccggcacctg cgcctaccgc
      181 ggcgcctccc aaggtcccga ccgccgtgcg tttgtactcc gtgctcccgt cggggtttgt
      241 tgcacatccg gccgatagca gcaggacccc aacaaacgcc gccctggtga ttttcatgct
      301 ccaccgcaca tccttttccg cgtcgatcat atgatgttga cggaacctcc ttacgccgcg
      361 ttctcctccc ggatgcgctt ccgcattctt tcctggaggt ctgttggaat atactccatg
      421 ccgtggtaaa ccttcccgtg ctcaaggact ttgcgaaaca ggacctcttc cgtctccccc
      481 caggcctcga aatcacagtc aaaatcaatg tcccggaaac agatgaattt cagcatggag
      541 cacctccatc ttctccgtgc aaccgaagat attcttttga ttttcccctg cgttgcaagg
      601 tttcccgaac ccgccaaatt tccggtccgg ggtgagaagg ggatttcgca gagatgcggt
      661 ttgacgtggg atatccttta catttcaaca tgaaacgatg gatatcttta taatccgctg
      721 gtcctttccg gggccgccct accggagcag tgcgaggagc gcctcgacct ccatgtagcc
      781 gctgatcatg cgcccgtccg ggaggatcat cgtcggcgtt ccctcgatct tcagccgctt
      841 ggcgagccgg atcgtttcgt ccaccgcgtc ggtcttgcag gtggcctcgg gaagcgcctt
      901 cccggcgtag gcgtcgtcga gcaacttctc ggacttcgag cagaccaccg cttggcactt
      961 ccggtaggtg gccatgtcat tcgggttccg ggggtagggc atgacgagga acgccacgtc
     1021 cggatccttc gccgccgctt tcctgatctc cccgtgcagc ttcacgcaat aggggcatgt
     1081 cgggtcggac aggacgatca ccgtcttctt cgccttcgtg ctcccgaccc ggatggcgtc
     1141 ctggaccggg atggaggcga cgtccacgcg gttgaggtcc tgataccgaa ggctggtcag
     1201 gttcgtcatg tcggccaggc ggatgaattg cccgctgaga aggtacttca gggaatagtc
     1261 caggaagagc ggatacgtct tcccgtttcg ggcgacgtcc acctcccaga cgccggcgaa
     1321 cggtcccggg gcgacggcga cgacgttgtc cacgaccttc ccgaggatct tccccgcttc
     1381 ctccttcgtg agcttgtggc actccgtgca atccccgggc gcagcggcct ctttccggaa
     1441 agccgcggcg ggggcggtca ggagcagggc gagacacgcg gcaagtacgc aggcggacag
     1501 gaacggtttc atccggggtc tccttgtaag ggaccgttac tttaagaaag caccaacctg
     1561 caattgtaca ccggcctcct cggaatggtc gacgaattcg ggacacgaat ccgggtcacg
     1621 gcgttcgcag gcaaaaaaac gttgttgcta aaaaccggtt ttttttgaga tcatgaacac
     1681 tcaaaatccc gtcttgtctg ggggtacgaa tgggaatccg gacgaccgga ggaaacctcc
     1741 ggaagagcct ctccccagcg ttccttgcga ttgcctgttc cctcatcctt tcctacctgc
     1801 cgaccggtcc cgccaccgcg gccgacgtga ccgtgtcctc gaagacctac ggcttgttgt
     1861 acgagcggga gctcgccggg ggtcagaagg accgctacgc cccgctgtac gaatatctgt
     1921 cggcggacgc ggcgaacctg ggcggcaaac cgctctcctt gcacttctac ggttgggggc
     1981 gggtcgatct cggggagcag accgggaccg gcaatacgtc gggggaaatc ggcagcctct
     2041 acctcgagta ccagcacccg gaggggaaca cccaggggaa gctgggtcga ttcttcctta
     2101 cggaaggagc ggcgatggat acgatcgatg gggcgttcgt caaggcgacg acccccgtcg
     2161 ggctgggggt atccctctac ggcggcgtcc ccgtggagta ctccaccctt gagaatgcca
     2221 agggggggga ctccattttc ggcggccggg tcttcttcgt ccggtccgga ttcgccgaga
     2281 tcggggcctc gtacctgaag gagagcaacg catccgacgc gctggaccgc gagttgtacg
     2341 gcggcgatct gtgggtgcgc gtcgccgggc cggtggagct caccgcgaag gcgtactaca
     2401 acgattccgc gggcgagatg gcgtcccagc ggtacgcggt ccggatcgtt cccaatgcga
     2461 ctttcgacat caccgcgggg tacgaggcgt ataactacaa ggggctcttc cggtcggcgg
     2521 tgaacccggc cttcacattc ccctcggtgg acaacaacga cgatgtccgg acgatcttcg
     2581 gcatcgtgga ttgggagttc acccccggat ggaccctgga ggtggcgggc aagaacatcc
     2641 ggcacgacct gtcggatccc ggcgacgcca accggggcga gatcgggttg cggcacgcgt
     2701 acaacggcaa gaaggatgtg gcggggctct ccgccgcctt cgtttcggcc gaccgcgatg
     2761 aaaacgagta ccaggaatac cgcgcttttg cctcctattc tcccgacaag ctccgcctga
     2821 cgatcgacgg actcatccag aagtacaagc aggagatcaa cggaaagaag aacgcctacc
     2881 aggttgtcgc cacggcggga taccagatct tcgccgcgct gcaggtctcc ggtaacctga
     2941 cctacacgca gagcccgaat ttcgagaacg attatgcagg gttggtccgg gtgagttacg
     3001 acctcgccac cagcacggga gggaagaaat gatgcgccgc gcgcacgccg cgaacatcct
     3061 cggggggatc ctggtcaccc ttctgatcgg ttgctcctac acttccacca ccccttcggt
     3121 gcctccgaag cacccggaag agctgccgat cggccgtgtc aattgcctcg aatgccacga
     3181 gaacgtgtcc accggggcga tgaagccgta cggcacgttc cgccactccc gcgtcttcat
     3241 cgattcccac ggcacgtacg cgcggcaggg gcagaacctg tgcgcctcct gccatgcccc
     3301 ggcgttctgc cagacgtgcc acgccgggaa ggaagagata aagcccagca cgaagatggg
     3361 cgatcggccg gaccggaggg cgccgcatcg tggcgactat ctggtcgcgc accggatcga
     3421 cgggcgcctc gaccccggct cgtgcttcca gtgtcacggg aacaagaacg acgcgcgctg
     3481 caagcagtgc catcggtaaa gcgtcccgca tccttcgaac gtacgatctc gggggagcgc
     3541 agcggattcc aagcggtaag gaggaacgag aaatgccggg atcccgaaag aaacggcccg
     3601 tgaggccttt cctactgctg tccctccttg cggcgctggc gtttgccgcc gggtgctcgg
     3661 acgccaatac acccggcggg gagagccaca tcgacgcgtc cggcaaaagc gtctccggat
     3721 ggatggtcgt cccgaccgtc gggtcgcatt ccagtaccgc cacgcaggaa tatggcagcg
     3781 ggagcttcag ctgcacccag tgccacgggg cggacctttc gggcggaatt aacggggtct
     3841 cctgcttcgg caacccggca ggatgccacc acgacccggt ggccgggtgg atcgccgact
     3901 cccccgcggc ccagaatcat ggggtttccg cgaagaaagc ccccggaagc tccgggttcg
     3961 tctcctgcaa gatctgccac gggaatggat tctcgggcgg cggctccaag gtctcgtgct
     4021 tcacctgtca cggtgtgaac gccccccatc cggcccagcc ctggcggggg tccccctaca
     4081 cgcacacgaa cgtcgacaat gcgaacgtgc cggtctgcgc gcagtgccac ttcccggggt
     4141 ccccgaacaa cccgccgaac catccggcga cgccagcccc ggcagggacg gcgcccgggt
     4201 gcctcaataa cacgctgtgc cacggggaga acccggttcc gcacccggtg gacaacgcc
//
LOCUS       DATGYW010000075         1869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_59909, whole genome shotgun sequence.
ACCESSION   DATGYW010000075 DATGYW010000000
VERSION     DATGYW010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59909"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..945
                     /locus_tag="VK429_00990"
     CDS             <1..945
                     /locus_tag="VK429_00990"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN90415.1"
                     /translation="ALILFHFIERPVKELVLGTKRISGGDLGHMIDVTTSDEMGHLAT
                     SFNQMTLDLQNAQKQIQEGIRNLEHKVEERTQELKTTQSQLLHSEKLAAVGALAATVA
                     HEINNPLTGVYTYIRLMERKIDQGQYGAEDIAKYKGYLDTMRREVERTTAIVQNLLDF
                     TRPKDPVRKPMNLVKVMEESLALISNKLSLTNIEVVKLLNPLPEIQADPAHMKQVFLN
                     LLINACEAMEEGGTLTIRSDYHPDTNTVTMSVRDTGTGIEEKDLARIFDPFFSTKKKG
                     TGLGLSVVNGIVTRHNGKVEIDSTPGKGTDFRVTLPVG"
     gene            979..1512
                     /locus_tag="VK429_00995"
     CDS             979..1512
                     /locus_tag="VK429_00995"
                     /inference="COORDINATES: protein motif:HMM:NF033823.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaemetzincin family Zn-dependent
                     metalloprotease"
                     /protein_id="HLN90416.1"
                     /translation="MRPVGAVDHAILEWLRKEMGDSLMATVRTLPSIPVPPESFEARR
                     NQYYSTKILKEMLGDVPQDTLKLLGVTDKDLCIPILTYVFGEAQVGGTAAVVSLARLQ
                     QEHYGLAPDRPMLLERLRKECLHELGHTFGLFHCPSRDCVMHLSNTVVDVDIRGRDFC
                     IGCHTVVASKTGTERRG"
     gene            1509..>1869
                     /locus_tag="VK429_01000"
     CDS             1509..>1869
                     /locus_tag="VK429_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012096577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLN90417.1"
                     /translation="MTMEKKVNIMVVDDEEIVRASLSSWLEEDGYQVEAVESGRKALE
                     RLPERNWDLMLVDLKMPGMDGIQLMDEVHKTAPEMLVIIMTAYATVDTAVKAMKKGAY
                     DYFVKPFNPDDISLTIRK"
BASE COUNT          434 a          523 c          605 g          307 t
ORIGIN      
        1 gccctcatcc tcttccactt catagagagg ccggtgaagg agcttgttct cggcacgaag
       61 cggatctcgg gaggagatct cggccatatg atcgacgtca cgacgagcga cgagatggga
      121 cacctggcga cgtcgttcaa ccagatgacc ctggacctgc agaacgccca gaagcagatc
      181 caggaaggga tccggaacct ggagcacaag gtggaagagc ggacgcagga actcaaaacg
      241 acccaatcac agctccttca ttcggagaag cttgccgccg tgggagcgct ggcggcgacc
      301 gttgcgcacg agatcaacaa cccgctgacc ggcgtctaca cgtacatccg gctcatggag
      361 agaaagatcg accagggaca gtacggggcg gaggatatcg cgaaatacaa ggggtacctc
      421 gatacgatgc gcagggaggt cgagaggacg accgccatcg tgcagaacct tctcgatttc
      481 acgcggccga aagatccggt ccgcaagccc atgaacctcg tcaaggtgat ggaggagtcc
      541 ctcgccctca tctcgaacaa gctgagcctc accaatatcg aggtggtgaa gctcctgaac
      601 cccttgccgg agatccaggc cgacccggcg cacatgaagc aggtgttcct caacctcctc
      661 atcaacgcct gcgaagcgat ggaagaaggg ggaaccctga cgatccggtc cgattaccac
      721 ccggatacga acaccgtaac gatgagcgtt cgtgacacgg ggaccgggat cgaggagaag
      781 gacctcgccc ggatcttcga tcccttcttc tcgacgaaga agaaggggac cgggctgggc
      841 ctatcggtcg tcaacggcat cgtgacccgc cataacggca aggtggaaat cgacagcacc
      901 cccgggaagg gaaccgattt ccgggtgacc ctgcccgtcg ggtaaaggaa agcggagaac
      961 atcggcaacg tcatctacat ccggcctgtc ggggcggtgg atcatgcgat cctcgaatgg
     1021 ctgaggaaag agatgggtga ctccctcatg gcgaccgtgc ggaccctgcc gtcgatcccc
     1081 gttccgcccg aaagcttcga ggcccgtcgg aaccagtatt actcgacgaa gatcctcaag
     1141 gagatgctgg gggacgtccc gcaggatacg ctgaagctcc tgggggtgac ggacaaggat
     1201 ctctgtatcc cgatcctgac gtacgtgttc ggggaggcgc aggtgggggg gacggccgcc
     1261 gtcgtttccc tggcacggct gcaacaggag cattacggcc tggcgccgga ccggccgatg
     1321 ctcctggaga gacttcgaaa ggaatgcctc cacgagctgg ggcacacgtt cggtctcttt
     1381 cattgtccat cgagggattg cgtgatgcac ctttcgaaca ccgtggtgga tgtggacatc
     1441 aggggacggg acttctgcat aggttgccat acggtcgtgg cgtccaaaac cgggacggag
     1501 aggcggggat gacgatggaa aaaaaggtca acatcatggt ggtggacgac gaggaaatcg
     1561 tccgggcttc gctgagcagt tggctcgagg aggacgggta ccaggtggag gccgtggaga
     1621 gcggcaggaa ggcgctggaa cgcctcccgg agaggaactg ggacctgatg ttggtggacc
     1681 tgaagatgcc cgggatggac ggaatccagc tgatggacga ggtccacaag accgcgcccg
     1741 agatgctggt catcatcatg acggcctacg cgacggtcga caccgcggtg aaggcgatga
     1801 agaagggggc ctacgattat ttcgtcaaac ctttcaatcc cgacgacatc tccctgacga
     1861 tccgcaaga
//
LOCUS       DATGYW010000076         1766 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_380498, whole genome shotgun sequence.
ACCESSION   DATGYW010000076 DATGYW010000000
VERSION     DATGYW010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380498"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..1331
                     /gene="glp"
                     /locus_tag="VK429_01005"
     CDS             129..1331
                     /gene="glp"
                     /locus_tag="VK429_01005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004512308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HLN90418.1"
                     /translation="MVDIEEARQIILRHIAPLPTEELLLLQGLGRVAGEDVCAPRDIP
                     ATDNSAMDGYAFSFASLQGNCLFVSGNIPAGKEWSTPVSAGDAVRIMTGAPIPRGCDT
                     VVPIENVETIGDTIRLAGEVKPGSHIRKQGEDLRVGQRAIAANSPLRPQEIGMLASLG
                     KTSVRVYRRPGVGVLATGDELLEIGSPPAPGKIINSNSYSIAAQVMEAGGDPVLLGIA
                     GDEVARTCDRIREGIRGDCLITTGGVSVGDRDCVKEAIVALGGEIRFWKVHMKPGKPF
                     AFAILEGKPVFALPGNPAAAMISFEVFVRPALLKMMGHTRIFRPTVTAALTGPIANKG
                     DRPHLIRVRVEARQYGYVASATGNQSSARLSSLTAANGFMTIAPGTALPSGESVVVSL
                     LDRPGVLP"
     gene            1328..1711
                     /locus_tag="VK429_01010"
     CDS             1328..1711
                     /locus_tag="VK429_01010"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HLN90419.1"
                     /translation="MSVPLLLGLSLCILVVAVLYSSVGHGGASGYIAILALFSLAPAA
                     FKPTALVLNILVSAIATFNFSRAGHFSWRLFWPFAATSIPFSFLGGYLRLPTHVYQPL
                     VGIVLLASACRLFPRKEERFQALSS"
BASE COUNT          322 a          564 c          535 g          345 t
ORIGIN      
        1 aggagaatcc gttctcagcc cgcaggcggc cgccttactg gaaaaattcc acgcgctgaa
       61 ggaggatttc aacgacatgg tgaaccgcaa gttcatcaaa ctccgcttct gaacggggtg
      121 cggaacgcat ggtcgacata gaggaagcgc gacaaatcat tctgcggcat attgctcctc
      181 ttccgacgga agaactcctc ctcctgcagg ggctggggag agtggccggc gaggacgtat
      241 gtgccccccg ggatatcccg gcgacggaca actccgccat ggacggttac gctttctcct
      301 tcgcctcgct ccaagggaac tgcctcttcg tatccggcaa tatccctgca ggtaaggagt
      361 ggagcacgcc ggtttccgcg ggcgatgcgg tccggatcat gaccggggca cccatccctc
      421 gaggatgcga tacggtcgtt ccgatcgaga acgtagaaac gatcggagac acgatccgtc
      481 tcgcagggga agtaaaaccc ggttcccaca tccggaagca gggcgaggac ctccgggtgg
      541 gacaacgggc tattgccgcg aactcccccc tccgaccgca ggagatcggg atgcttgcct
      601 ccctcgggaa gacatcggtt cgcgtctacc gcagacccgg ggtgggcgtg ctcgccacgg
      661 gggacgaact tctcgaaatc ggttcccccc ctgctcccgg aaagatcatc aacagcaaca
      721 gctacagcat cgccgcacag gtaatggagg ccggcggcga tccggtcctg ctgggaatcg
      781 ccggggatga ggtggcaaga acttgcgacc ggatccgtga agggattcgg ggagactgcc
      841 ttatcaccac cgggggggtt tcggtcggcg acagggactg cgtgaaagag gcaatcgtcg
      901 cgctgggagg tgaaatcagg ttctggaagg tccacatgaa gcccgggaaa ccgttcgcct
      961 tcgccatcct ggaggggaag ccggtatttg ccctcccggg aaacccggcg gcggcaatga
     1021 tctccttcga ggtgttcgtc cgccccgccc ttctgaaaat gatggggcac acgcgcatct
     1081 tccgcccaac cgtgacggcc gccttgaccg ggccgattgc aaacaagggg gatcgccccc
     1141 acctcatccg ggtgcgggta gaggcgcggc agtacggtta tgtcgcatcc gctaccggca
     1201 accagagttc cgcgcgactt tcctctctga cggcagccaa cgggttcatg acgatagcgc
     1261 ctggaaccgc tcttccttcc ggggaaagcg tggtcgtttc cctgctggac cggcccggag
     1321 tcctgccgtg agcgttcccc tgctcctcgg tctgtcgctc tgcatcctcg tggtagcggt
     1381 cctctactcc agtgtcggcc acggcggggc atccgggtac atcgccatcc tggccctttt
     1441 cagtcttgct cccgccgcct tcaagcctac cgcattggtc ctgaacatcc tggtttcggc
     1501 aatcgccacc ttcaatttct cgcgcgccgg gcatttctcc tggcgtttgt tctggccgtt
     1561 cgcggcaacc tccatcccct tcagctttct gggaggctac ctccgcctgc ccacgcatgt
     1621 ataccagcca ctcgttggaa tcgtgctgct ggcatccgcc tgtcgccttt tcccccggaa
     1681 ggaagagcgg ttccaggcgc tatcgtcatg aacccgttgg ctgccgtcag agaggaaagt
     1741 cgcgcggaac tctggttgcc ggtagc
//
LOCUS       DATGYW010000077         2156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_327488, whole genome shotgun sequence.
ACCESSION   DATGYW010000077 DATGYW010000000
VERSION     DATGYW010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2156
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327488"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..607
                     /locus_tag="VK429_01015"
     CDS             <1..607
                     /locus_tag="VK429_01015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HLN90420.1"
                     /translation="PEGANNATSSAGFVPLFAFGLPTGPALAVLLGGLIMYGLQPGPM
                     LFQTNPKFVWAVIASMYIGNVILLVLNLPLVGFWARIALIPFPVLGPLIILCSVIGAY
                     SIRFMLFDVWVALLFGGIGYGMRKLHFPIAPLVLATVLAQMLETSLQQSLLISQGSWL
                     IFFNRPIAGFFMVLALASIARGVWLQVRSHAPEIAIDDADE"
     gene            complement(652..1275)
                     /locus_tag="VK429_01020"
     CDS             complement(652..1275)
                     /locus_tag="VK429_01020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012899693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRIC cation channel family protein"
                     /protein_id="HLN90421.1"
                     /translation="MNQESLFLLFDLVGTFAFAMSGAFKAIRKNLDLLGILILGFATA
                     IGGGVIRDALLHRTPVSFTTNLYALFAFLGCLSAVAWHYVAKGKRFLDEDRAFLLVDA
                     IGLAVFAVIGASAGAAAGLKPWSVVVLAALTAAGGGAVRDLLVMEIPMMLHADFYATA
                     ALLGGLAFVLLSAAGFQPSVVSAAAFLTTLLLRTAAIYLGWSLPKLR"
     gene            1394..>2156
                     /locus_tag="VK429_01025"
     CDS             1394..>2156
                     /locus_tag="VK429_01025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015719212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HLN90422.1"
                     /translation="MAILRTIRKVWRSRPTIEGAGVHLKRAFGNQEVPLLDPFLLLDD
                     FRSDDPSKYLPGFPWHPHRGIETITYVLQGEVEHGDSMGNRGDITAGDVQWMTAGSGI
                     VHQEMPRGDAQGRMGGFQLWANLPASDKMMDPRYRDVKRGEIPEVSTEGGALVKVVCG
                     LVNNVQGPVRDIVTDPEYLDVAVPAGARFTHPVKRGHTVFAYVILGSATFGTERESLC
                     GSETLVHFADGDAVSITAEKEPVRFLLVSGKPIGEP"
BASE COUNT          397 a          720 c          680 g          359 t
ORIGIN      
        1 gccggaagga gcgaacaacg ccacgtccag cgccggcttc gtcccgctct tcgccttcgg
       61 gctgccgacc ggccccgcgc tcgccgtgct gctgggcggc ctcattatgt acgggcttca
      121 gcccgggccg atgctcttcc agacgaaccc gaagttcgta tgggcggtca tcgccagcat
      181 gtacatcggg aacgtgatcc tcctggtatt gaaccttccg ctcgtgggat tctgggcacg
      241 gatcgccctc attccttttc cggtcctggg acccctcatc atcttatgct ccgtgatcgg
      301 ggcgtacagc atccggttca tgctcttcga cgtctgggtc gcgctcctgt tcggggggat
      361 cggctacggg atgcggaagc tgcacttccc gatcgctccg ctggtgctcg ccaccgtcct
      421 cgcgcagatg ctggagacgt ccctgcagca gtcgctgctg atctcccaag gctcctggct
      481 catcttcttc aaccggccca tcgccggctt cttcatggtc ctggccctcg cctccatcgc
      541 aaggggggtc tggctccagg ttcgttccca cgcccccgaa atcgccatcg acgacgcgga
      601 cgagtgaccc gcctttcacc gcccggatac cctgcgacgc gtccgggaat tctaccgaag
      661 cttggggagg ctccagccca ggtagatcgc ggcggtccgc aacaggagcg tcgtgaggaa
      721 cgcggcggcc gaaacgacgg agggttgaaa acccgccgcg gaaagaagga caaaggcgag
      781 cccccccagc agcgccgcgg tggcgtagaa gtccgcgtgc agcatcatcg ggatctccat
      841 gacgaggagg tcgcggaccg ccccgccccc cgcggcggtc aaggccgcga gcaccacgac
      901 gctccacggc ttcaaccccg ccgcggcgcc ggcggaagcc ccgatcacgg cgaagacggc
      961 caaaccgatc gcatccacca gcagaaaagc acgatcttca tccaggaacc tcttcccctt
     1021 cgcgacgtag tgccacgcga ccgccgacag gcagcccagg aatgcgaaca gggcgtacag
     1081 gttcgtggta aaggaaaccg gggtgcgatg aaggagggcg tcgcggataa cgccgccacc
     1141 gatggccgtg gcgaacccga gaatgaggat gccgaggaga tcgaggtttt tccggatcgc
     1201 cttgaacgct ccggacatcg cgaacgcgaa ggtccccacg aggtcgaaga gcaggaacaa
     1261 cgattcctgg ttcatccggg caatttccca caatccagcc cgaatgacaa cgcgccgttc
     1321 gccatgcatc cgccgcaacg attgaccctc tcgtcccttc cggcctatat tccctgatgg
     1381 aggaggtgcg atcatggcga tccttaggac gatccggaag gtgtggcggt cccggcccac
     1441 gatcgaagga gcgggcgttc atctcaagcg tgcgtttgga aaccaggagg ttcccctgct
     1501 cgaccccttc ctgctcctcg acgacttccg ctcggacgac ccctcgaaat accttcccgg
     1561 attcccctgg cacccgcacc gcgggattga gacgatcacc tacgttctcc agggggaggt
     1621 ggagcacggg gacagcatgg gaaaccgggg ggatatcacc gcaggcgacg tccagtggat
     1681 gaccgcgggc agcgggatcg tccaccagga gatgccaagg ggcgacgccc agggacggat
     1741 gggagggttc cagctctggg ccaacctgcc cgcctccgac aagatgatgg acccgcgata
     1801 ccgggacgtg aagcgcggcg agatcccgga agtatccacg gagggcggtg cgctggtgaa
     1861 ggttgtctgc ggactggtga acaatgtcca ggggcccgtc cgggacattg taaccgaccc
     1921 ggagtacctc gatgtcgccg tcccggccgg ggcgagattc acccacccgg tgaagcgggg
     1981 gcacacggtc ttcgcttacg tcattctggg gagcgcaacc ttcggcacgg agcgggaatc
     2041 cttgtgcggg tcggagaccc ttgtccactt cgccgacggg gacgccgtct ccatcaccgc
     2101 cgaaaaggaa ccggtccgct tcctcctcgt gtccgggaaa ccgatcggcg agccgg
//
LOCUS       DATGYW010000078         1958 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_435121, whole genome shotgun sequence.
ACCESSION   DATGYW010000078 DATGYW010000000
VERSION     DATGYW010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435121"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..384)
                     /locus_tag="VK429_01030"
     CDS             complement(<1..384)
                     /locus_tag="VK429_01030"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLN90423.1"
                     /translation="MILIISLFMTAPAIAGQFEEATKAIDRGDYATAYRLFMPLAERG
                     DTKAQYNLGVMYLEGQGVRQDYSKAAKWFRKAAEQGYDTAQLGLGIMYHNGQGVPQDY
                     GEAAKWLRRAAGQENDTAMNNLGLMF"
     gene            complement(513..>1958)
                     /gene="carB"
                     /locus_tag="VK429_01035"
     CDS             complement(513..>1958)
                     /gene="carB"
                     /locus_tag="VK429_01035"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015750781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HLN90424.1"
                     /translation="NPETVSTDYDSSDRLYFEPLTKEDVLAIIEEEKPVGVIVQFGGQ
                     TPLKLAVPLEKEGVRILGTSPESIDRAEDRERFAEMLNHLGLSQPPNGIARSTPDAVA
                     IAARIGYPVLLRPSYVLGGRAMEIVHDEDGLRRYLTEAVSASEEKPVLVDRFLEDAIE
                     VDVDAISDGETVVVGGIMEHIEEAGVHSGDSACSLPPHSISRETIAEITRQTKALASE
                     LSVIGLMNVQFAIQRGRIFILEVNPRASRTIPFVSKAIGVPLAKLAAKVMAGRKLEDL
                     GFTSEVVPGHVCVKEAVFPFIKFPDVDTLLGPEMKSTGEVMGIDRTFGTAFAKAQIGA
                     GMILPRSGKVFVSVRDEDKEGVLAAAEGLKRCGFSFVATRGTAAFLTGRGLPCDTVRK
                     VNEGRPHVADLIRNGEIALVINTPLGAQSKADSYYIRRASLVYNVPYFTTLAAARAVS
                     LAISALIADDLSVRSLQEYHGITRNAAPGAQ"
BASE COUNT          330 a          613 c          628 g          387 t
ORIGIN      
        1 gaacatgagg ccgaggttgt tcattgcggt gtcgttttcc tgccctgctg cccttcgaag
       61 ccacttcgcc gcctcgccgt aatcctgcgg gacgccttga ccgttgtggt acatgatgcc
      121 gaggcccaac tgggcggtgt cgtatccctg ctctgctgcc ttccggaacc acttcgccgc
      181 cttggagtag tcctgccgga cgccttgacc ctctaagtac atgacgccga ggttgtactg
      241 ggcttttgtg tcccctcgtt ctgccaatgg catgaagagg cgataggcgg tcgcgtagtc
      301 accacggtcg attgcttttg tggcctcctc gaactgtcct gcgattgccg gagcagtcat
      361 gaataaggag atgatcagga tcaaggtggc ggaaggtctt cgcatatgcc acctcattga
      421 cgagcataac cgcaagcctt tgatatcgat aagtatgcgt aatctttcaa cacacgtttc
      481 agaattggcg tactggatgg ggtgcggtgc ggtcactgcg ctccaggggc tgcgtttcgc
      541 gtgatcccgt gatactcctg gagactccgg accgacaggt cgtccgcgat cagggccgag
      601 atcgcgagcg agacggcgcg cgccgcggcc agggtggtga agtacggcac gttgtagacc
      661 agggatgcgc gtcgtatgta gtaggagtcg gccttcgact gggcgccgag cggcgtgttg
      721 atgaccagcg cgatctcccc gtttctgatc aggtccgcca cgtggggacg cccctcgttc
      781 accttccgca ccgtgtcgca agggagcccg cgcccggtca ggaacgccgc cgttccgcgg
      841 gtggcgacga acgagaaccc gcaccgcttc agcccttcgg ctgcagcgag aactccctcc
      901 ttgtcctcgt cgcgcacgct cacgaacact ttcccggaac gcggcaggat catccccgcg
      961 ccgatctgcg ccttggcgaa ggcggtgccg aacgtcctgt cgatccccat cacctctccg
     1021 gtcgacttca tctccggacc gagcagcgtg tcaacgtcgg ggaacttgat gaaggggaag
     1081 accgcctcct tgacgcagac gtggcccggc acgacttcgg atgtgaaccc gaggtcctcc
     1141 agctttcggc cggccatcac cttcgcggca agcttggcca gcggcacccc gatcgccttg
     1201 cttacgaaag ggatggtgcg ggaagcccgc gggttgacct cgaggatgaa gatcctgccg
     1261 cgctggatgg cgaactggac gttcatcagg ccgatgacgg aaagttcgga cgccagcgcc
     1321 ttcgtctggc gggtgatctc ggcgatcgtc tcccttgaga tggagtgcgg gggaagggaa
     1381 catgccgaat cccccgaatg gacgcccgcc tcctcgatat gctccatgat tccaccgacc
     1441 acgaccgttt ccccgtcgga gatcgcgtcc acgtcgacct cgatggcgtc ctcgaggaac
     1501 cggtcgacga ggaccggttt ctcctcggaa gcggagacgg cctccgtgag gtatcttcga
     1561 agaccgtcct cgtcgtggac gatctccatc gcgcgcccgc cgaggacgta ggacggccga
     1621 agcaggacgg ggtagccgat ccgggcggcg atcgcgaccg catcgggggt ggatcgcgcg
     1681 atcccgttcg gcggctgcga cagaccgagg tggttcagca tctccgcgaa ccgctcgcga
     1741 tcttccgcgc ggtcgatgct ctccggcgac gtcccgagga tccggactcc ctccttttcg
     1801 agggggacgg cgagcttcag cggggtctgg ccgccgaact ggacgattac gccgaccggc
     1861 ttctcttcct cgatgatggc gagaacgtcc tccttcgtca ggggctcgaa gtagaggcgg
     1921 tcggaggagt cgtagtcggt ggagacggtc tcgggatt
//
LOCUS       DATGYW010000079         1522 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_2916, whole genome shotgun sequence.
ACCESSION   DATGYW010000079 DATGYW010000000
VERSION     DATGYW010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2916"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VK429_01040"
     CDS             complement(<1..214)
                     /locus_tag="VK429_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014088613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HLN90425.1"
                     /translation="MRFMMMMIPRVYQPDAPPGEKAGEGFAPPAEAVARMMKYNEELA
                     KAGALIALDGLHPSSKGARVAFSGGKP"
     gene            complement(227..847)
                     /locus_tag="VK429_01045"
     CDS             complement(227..847)
                     /locus_tag="VK429_01045"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010941230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HLN90426.1"
                     /translation="MRPEGIPRCGWVGSEPLFRTYHDREWGVPVHDDRLLFEFLILEG
                     AQAGLSWITILRKRDAYRAAFAGFDPGAVAGFDGRKVAQLLADPGIVRNRLKVESAIT
                     NARSFLKIQEEFGSFDAYQWRFVDGRPIRNTWRNIKDVPASTSVSDAMSRDLKRRGFR
                     FVGSTICYAHMQAVGMVNDHTVDCFRWREVGRKPGVHRRIEHIPEP"
     gene            complement(844..>1522)
                     /locus_tag="VK429_01050"
     CDS             complement(844..>1522)
                     /locus_tag="VK429_01050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011421303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLN90427.1"
                     /translation="TSFGKVLPALARNRQVIAFEQQGHGHTADIADRPFTFGQSADDA
                     AGLLRHLNIGKADIFGYSNGGHIALQMAIRHPDLVRKLVVESAMFNHGGSDPGFWKSF
                     ERAKLDDMPPELREAYLGVAPHPEDLPTFFAKSVQRMVNFKDWTPEDIQSINAPTLIV
                     IGDHDIVRPEHAVLMFRLLPNAQLAVLPGTDHMTIVNRSDWLVPMVEVFLDSPMPPAR
                     SNGKEKR"
BASE COUNT          270 a          466 c          473 g          313 t
ORIGIN      
        1 cgggcttccc gccggaaaac gcgacccgcg cgcccttcga gcttgggtga agcccgtcga
       61 gcgcgatgag cgcaccggct ttcgcaagtt cctcgttgta cttcatcatc ctggcgacgg
      121 cttcggcggg aggggcgaac ccttcccccg ccttctcccc cggaggggca tcgggttgat
      181 aaacccgcgg gatcatcatc atcatgaatc gcattgtcat tcctccttat ggttcgggga
      241 tgtgctcgat gcgtcgatga actcccggtt tccggcctac ctcccgccat cggaaacaat
      301 ccaccgtgtg atcattcacc atgccgaccg cctgcatgtg ggcgtagcag atggtgctgc
      361 cgacgaagcg gaaaccgcgc cgtttcaggt cgcgactcat ggcgtccgat accgacgtgc
      421 tggcgggaac atcctttatg tttcgccagg tgttccggat cggcctgccg tccacaaaac
      481 gccactggta ggcgtcgaag gagccgaact cctcctgtat cttcaggaag gagcgggcat
      541 tcgttatggc ggattccacc ttcaggcggt tgcgtacgat tccggggtcg gccagaagtt
      601 gtgctacctt ccttccatcg aaaccggcca ccgctccggg gtcgaagccg gcgaaggcgg
      661 cgcggtaggc atcccgtttc ctcaggatcg tgatccagga gagcccggcc tgggctccct
      721 ccagtatcag gaactcgaac aagagccggt cgtcgtggac cggtaccccc cattcccggt
      781 cgtgataggt ccgaaaaagc ggttcgctgc cgacccagcc gcaccggggg atgccttcgg
      841 gtctcatcgt ttctctttcc cgttcgatcg agccggcggc atgggcgaat cgagaaacac
      901 ctcgaccatc gggaccagcc aatcggagcg gtttacaatc gtcatgtggt ccgtgcctgg
      961 taatacggcg agctgggcat tcgggagcag gcggaacata aggacggcgt gttcgggacg
     1021 gacgatatcg tggtcaccga tcacgatcag ggtcggtgcg ttgatcgact ggatgtcttc
     1081 cggcgtccag tccttgaaat tcaccatccg ttgcacgctc tttgcgaaaa acgttggcaa
     1141 atcctcgggg tggggcgcca ctccgaggta agcctctcgc agttccgggg gcatgtcgtc
     1201 cagtttcgcg cgctcgaaag acttccagaa cccggggtcg cttccgccgt ggttgaacat
     1261 ggcggattca acaaccagtt tccgcaccag gtcggggtgg cggatggcca tctggagggc
     1321 aatgtggcct ccgttgctgt atccgaagat gtccgcctta ccgatgttga ggtgccggag
     1381 caggccggcg gcatcgtccg cggactgccc gaaggtaaac ggccgatcgg caatgtcggc
     1441 ggtgtgcccg tgtccctgct gctcgaaagc gatgacctgc cgattccttg ccagggccgg
     1501 cagaaccttt ccgaaggagg tt
//
LOCUS       DATGYW010000080         1512 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_380719, whole genome shotgun sequence.
ACCESSION   DATGYW010000080 DATGYW010000000
VERSION     DATGYW010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1512
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380719"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..259)
                     /locus_tag="VK429_01055"
     CDS             complement(<1..259)
                     /locus_tag="VK429_01055"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLN90428.1"
                     /translation="MNGRFRLKAREWLDVPERKRAYNERHFAEAASRYDLATRRMSLG
                     RDVAWKQALVAALPVLSSPVCVDLACGTGDVAFLLGGRYPGG"
     gene            complement(256..>1512)
                     /locus_tag="VK429_01060"
     CDS             complement(256..>1512)
                     /locus_tag="VK429_01060"
                     /inference="COORDINATES: protein motif:HMM:NF013316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HLN90429.1"
                     /translation="GMRLSVATNFDPALVDALRGYPVVELFGKLREDAVGGGRAPYQL
                     APVSRSLLAAHVRDARAAGISFNYLLNASCLGNREITRTGQAEIEDLCGWLCGIGVET
                     VTVSSPFLLRIVKTRYPELKVRVSVFAGVDRVRKARMWEEMGADGIVLDSLLVNREFA
                     TLARIRESVKCDLELLVNNNCLSSCALSPAHMNALAHAGQSWHGNRGFFIDWCFLRCT
                     EMKLRDPVNYIRSEWIRPEDIPAYEEMGYDLFKVTERDLPTTVMVNRVRAYAARQYDG
                     NLLDLVQPYALQEVNGSERYYRKGIGWLLRFLLRPGLVNPARMLPLKRLADLRHMTRP
                     VTGAPPVVVDNRALDGFMERFREKGCRDVECEACRWCHDFAAKAVRIDPEESRRALAA
                     YDEVFRSLDGGAMWRYFPGGNGVGNP"
BASE COUNT          255 a          544 c          477 g          236 t
ORIGIN      
        1 tccctccggg gtagcgtccc ccgagaagaa atgccacgtc gccggtgccg cacgcgaggt
       61 ccacgcaaac gggcgaagag aggaccggca gggctgcgac gagcgcctgc ttccacgcca
      121 cgtcccgccc gagggacatc cttcgtgtcg ccaggtcgta ccgcgacgcc gcctcggcga
      181 agtggcgttc gttgtaggcc cgcttccgct cggggacgtc taaccactcc cgcgctttga
      241 ggcggaatcg cccattcacg ggttgccgac cccgttcccg cccggaaagt atcgccacat
      301 cgccccgccg tcgagggagc ggaatacctc gtcgtacgcc gccagcgcgc gtcggctctc
      361 ctccgggtcg atccggaccg ccttcgccgc gaaatcgtgg caccagcggc acgcctcgca
      421 ctccacgtcg cggcacccct tctcccggaa ccgttccatg aagccgtcga gcgcccggtt
      481 gtcgacgacc accggaggcg cgcccgtcac cggacgggtc atgtgccgca agtccgccag
      541 cctcttcagc gggagcatcc gggccgggtt gaccagcccc ggccgaagga ggaaccggag
      601 cagccacccg atccccttcc ggtagtaccg ttcgctcccg ttcacctcct gcaaggcgta
      661 cggctggacc aggtcgagga gattgccgtc gtactgtcgc gccgcatagg cccggacccg
      721 gttgaccatc accgtcgtgg gaaggtcccg ctccgtcacc ttgaacaggt cgtaccccat
      781 ctcttcgtac gccgggatgt cttccgggcg gatccactcc gagcggatgt aattcaccgg
      841 atcccgcagc ttcatctccg tgcaccgcag gaagcaccag tcgatgaaga agccgcggtt
      901 gccgtgccac gactggccgg cgtgggccag ggcgttcatg tgggcagggg agagggcgca
      961 cgaggagagg cagttgttgt tcaccagcag ttcgaggtcg catttcaccg attcgcggat
     1021 ccgtgcgagc gtcgcgaatt cccggttcac gaggaggctg tcgaggacga tcccgtccgc
     1081 gcccatctct tcccacatcc gcgccttgcg cacgcgatcc acgcctgcga acacggagac
     1141 ccggaccttg agctccgggt agcgcgtctt gacgatccgg agcagaaacg gggaggaaac
     1201 ggtaaccgtc tccacgccga tgccgcaaag ccagccgcag aggtcctcga tctccgcctg
     1261 ccccgtgcgc gtgatctccc ggttcccgag acaggacgcg ttgaggagat agttgaagga
     1321 gatccccgcc gccctcgcgt cccgcacgtg cgcggcgagc agtgaacggg acaccggcgc
     1381 gagctggtag ggggcgcgcc cgccgcccac tgcgtcctcc cgcaacttgc cgaacaattc
     1441 tacgaccggg tacccccgga gcgcatcgac cagcgcgggg tcgaaattcg tggcgacgga
     1501 aagcctcatc cc
//
LOCUS       DATGYW010000081         2858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_60256, whole genome shotgun sequence.
ACCESSION   DATGYW010000081 DATGYW010000000
VERSION     DATGYW010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2858
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60256"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..802
                     /locus_tag="VK429_01065"
     CDS             <1..802
                     /locus_tag="VK429_01065"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HLN90430.1"
                     /translation="AAVLLTGWHGVPWGYRETQRTLSQIVSERAGAGASEHVFREIAP
                     DVLVYPDRVSPDGQRMSGVFLSFRPEGDDPLLVFAHEGRFMPATGDGVVGLELSDGTI
                     HGEPTGKPLYRVASFGRMTFRIPLEASSNPRGDNPKGMTLPELSRKVDATGGRGTNAT
                     YRYHFHRRLSLAVSCLSFGLLAIPLGFSLRSRGRSSAVGITVALFLVYYLFIAAAGAM
                     ERYSGPLMIALLWAPNTLGLSLSAWILWRSERSVILFPRPFGKGRLRK"
     gene            799..1875
                     /gene="lptG"
                     /locus_tag="VK429_01070"
     CDS             799..1875
                     /gene="lptG"
                     /locus_tag="VK429_01070"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR04408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HLN90431.1"
                     /translation="MTVLFRYLFREFLRAAAVCILGFLLLFLLIDFVDHAEKLLRHNA
                     GLREIGWYYLTRVPGIFVLISPVGTMLAVLVAVSLRVRSNELTAIFSGGVSLLRTCLP
                     ILAGCALVSALSLLCSEVLAPAANRHAREIERLRVRPGKVAAQFSGNRYWMRGERGIL
                     SAQVVDGPSRSLRGFQYIEVDPEFRPLRRIESRRARLLPDGAWELAEGRERILGERPS
                     VEAFPLRTYRFPETMEGFIEGETPPEEMTYAQLSRYVGEVRRKGYEARGYETDLHAKI
                     AYPLLNVLISMLAIPFALRSPRSGGVWRSIGLGLLMGFACWVVLSASLSLGRKGMLPA
                     LLAAWLPGVLFAGSGAALFRGVGR"
     gene            complement(1879..>2858)
                     /locus_tag="VK429_01075"
     CDS             complement(1879..>2858)
                     /locus_tag="VK429_01075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013537999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HLN90432.1"
                     /translation="ISVYAIKGENRKTYYRHILAALAVGPHMTMDDGADLVSMVHSER
                     KEYLKEIVGGTEETTTGVIRLSAMGQKGVLRYPIIAVNEAKTKHFFDNRYGTGQSTLD
                     GILRATNRLLAGSCFVVAGYGWCGRGLAMRARGMGARVIVTEIDPLPALEALMDGFEG
                     QPMAEAAKVGDFFCTVTGNLHVIRREHFERMKDGAIVCNSGHFNVEIDIPALAKMAKS
                     VRAVRPFVEEYVLRNGRAVHVLAEGRLINLAAAEGHPANVMDMSFANQALSAEYMVRN
                     HGSLSNTVHMVPEAIDREIARLKLASSGARIDRLTPEQRNYLVSWEMGT"
BASE COUNT          395 a         1019 c          909 g          535 t
ORIGIN      
        1 cgccgcggtg ctgctcaccg gatggcacgg ggtcccctgg gggtaccgcg agacgcagcg
       61 caccctctca cagattgtct ccgagcgcgc cggcgccggc gcctccgagc acgtcttccg
      121 cgaaatcgcc cccgatgtgc tggtgtaccc cgaccgggtc tccccggacg ggcagcggat
      181 gtccggcgtc ttcctctcct tccgtccgga gggggacgac ccgcttctcg tattcgcgca
      241 cgagggccgc ttcatgcccg ccaccggcga cggggtcgtg ggcctggagt tgtccgatgg
      301 gacgatccac ggcgagccga ccggaaagcc gttgtaccgg gtcgcctcct tcggccggat
      361 gacgttccgg atccccctcg aagcctcctc caatccccgg ggggacaacc ccaagggcat
      421 gaccctcccc gaactgtcac ggaaggtcga cgcgaccgga ggcaggggga cgaacgccac
      481 ctatcggtac catttccacc gccggctctc cctcgccgtc tcctgcctct ccttcggcct
      541 gctcgcgatt ccgctcggat tctccctgcg gtcccgggga agatcgtccg ccgtcgggat
      601 caccgtcgcc ctgttcctgg tctactacct gttcatcgcc gcggcgggag cgatggagag
      661 atactccggt cccttgatga tcgccctcct ctgggcgccc aacaccctcg ggctctccct
      721 ttccgcgtgg atcctctggc ggtcggagcg gagcgtgatc ctcttccccc gccccttcgg
      781 caagggtcgg ctccgcaaat gaccgtcctc ttccgctacc tgttccggga gttcctccgc
      841 gcggcggcgg tgtgcatcct cggctttctc ctcctgttcc tgctgatcga cttcgtcgac
      901 cacgccgaga aattgctgcg gcacaacgcg ggcctccggg aaatcggatg gtactacctc
      961 acccgggtgc cgggcatctt cgtgctgatc tccccggtcg ggacgatgct ggccgtgctg
     1021 gtcgccgtct ccctgcgcgt ccgctcgaac gagctgacgg cgatcttctc cggcggggtg
     1081 agccttctcc ggacctgcct cccgatcctt gcaggatgcg cgctggtgtc ggccctgtcg
     1141 cttctctgct ccgaggtcct ggcgccggcc gcgaaccggc acgcccggga gatcgagcgg
     1201 ctccgggtgc gccccggaaa agtcgctgcg cagttctcgg gaaaccggta ctggatgcgg
     1261 ggcgagcggg ggatcctctc cgcccaggtg gtggacggcc cgtcccgctc gctgcggggg
     1321 ttccagtaca tcgaggtcga tccggagttc cgcccgctgc gcaggatcga gtcccggagg
     1381 gcccgtctcc ttcccgatgg cgcgtgggaa cttgccgaag gcagggagcg gatcctcggg
     1441 gaaagaccgt cggtggaggc gtttcccctc cggacgtacc ggttcccgga aacgatggag
     1501 gggttcatcg agggggaaac cccccccgag gagatgacct acgcgcagct ctcgcggtac
     1561 gtcggggaag tgcggcggaa ggggtacgag gcgagggggt acgaaaccga cctgcacgcg
     1621 aagatcgcct accctctgct gaacgtcctc atcagcatgc tggcgattcc cttcgccctg
     1681 cgctcgcccc ggtcgggcgg cgtctggcgc agcatcgggc tcgggctcct gatgggattc
     1741 gcctgctggg tcgtcctgtc ggcgtcgctc tcgctgggca ggaaggggat gctaccggct
     1801 ctgctcgccg cctggctccc cggggtcctc ttcgccggct cgggagccgc gctattccgg
     1861 ggcgttggcc gatagacctc aggtccccat ttcccaggag acgaggtagt tgcgctgctc
     1921 gggcgtgagg cggtcgatcc gggcgccgga ggacgcgagc ttgagccgcg cgatctcccg
     1981 gtcgatcgcc tccgggacca tgtggacggt gttcgacagc gatccgtggt tccggaccat
     2041 gtactccgcc gaaagcgcct ggttggcgaa gctcatgtcc atcacgtttg ccgggtgccc
     2101 ttccgcggcc gccaggttga ttagccgtcc ttctgccagg acatggaccg cgcggccgtt
     2161 cctcaggacg tactcctcga caaacggtct gaccgcgcgc accgacttcg ccatcttcgc
     2221 cagcgcggga atgtcgatct cgacgttgaa gtggccggag ttgcacacga tcgccccgtc
     2281 cttcatccgc tcgaaatgct ccctgcggat cacgtgcagg ttcccggtga cggtgcagaa
     2341 gaagtccccg accttcgccg cctcggccat cggctgcccc tcgaagccgt ccatcagcgc
     2401 ctcgagcgcc ggaagaggat cgatctcggt gacgatcacc cgggcaccca ttccccgggc
     2461 acgcatcgcc agcccccgtc cgcaccagcc gtagccggcc acgacgaaac agctccccgc
     2521 cagcaggcga ttcgtcgccc tgaggatgcc gtcgagcgtc gactgacccg ttccgtaccg
     2581 gttatcgaag aagtgcttcg tcttcgcctc gttcaccgcg ataatggggt accgcaggac
     2641 gcccttctgt cccatcgcgc tcaaccggat gacgcccgtg gtcgtttcct cggtcccccc
     2701 aacgatctcc ttcaggtact ccttcctctc cgagtggacc atcgagacca ggtccgcccc
     2761 gtcgtccatg gtcatgtgag gtcccacggc gagtgccgcg agaatgtgcc ggtagtacgt
     2821 cttccggttc tcccccttga tcgcgtagac ggagatgc
//
LOCUS       DATGYW010000082         1562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_60387, whole genome shotgun sequence.
ACCESSION   DATGYW010000082 DATGYW010000000
VERSION     DATGYW010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60387"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..1041
                     /locus_tag="VK429_01080"
     CDS             97..1041
                     /locus_tag="VK429_01080"
                     /inference="COORDINATES: protein motif:HMM:NF013998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HLN90433.1"
                     /translation="MSSVPRRFRLPRHLRVPFAGRAFLLVTLGVGVAAVNTGNNLLYL
                     AVSLNLSLVLLSGVLSEGTLRHVTLKVRLSSEAFAGGGTFLAVTCSAEAKRFPGISLV
                     AILRAGVDSATVRFPDIAPGTSATRVVPFRPSLRGKVDSIHASLSTRFPFSLFEKSVE
                     LDVPARILVYPRPSPPATRGEDLPVAAPSGRPFLSGRASAFPRGVREHLPADPVRDIH
                     WKATARRGRWMVKEREAEATPAIDLWVEEGGTQEAFEDRLSDACGAVLELERRAVPFR
                     LRIGDRLCAESHDPDRRSKALEALAKARFDPAPPVTPP"
     gene            1038..>1562
                     /locus_tag="VK429_01085"
     CDS             1038..>1562
                     /locus_tag="VK429_01085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90434.1"
                     /translation="MTRRFPTREFLWWSLRAHWALALALLALFTDAARWALLLAAFAW
                     AGGVAMDRADTPRATLSRLGSPIVALFLAASAADFLFGSRDLLASLSLLVLGVQSVKF
                     LLPKGSRDGWQLCAVALLEFLAAASGTDALVFALFSFLFFVASAGAMGALHDQEAEEA
                     GRPPCGYAAPVRTAA"
BASE COUNT          183 a          590 c          509 g          280 t
ORIGIN      
        1 cctctgccac cgcgtcttcc cgaaggggga cgacgccggg tcggaagccg cccaagcgat
       61 cctcgaggag gttctctcgg tggtgccgtc gccgctgtga gctccgtgcc gcgacggttt
      121 cgccttcccc ggcatctccg ggtacccttc gcggggaggg cgttcctcct cgtcaccctc
      181 ggggtcggcg tcgccgccgt caacacgggg aacaacctcc tctatctcgc cgtgagccta
      241 aacctgtccc tggtcctcct gtcgggcgtt ctgtccgaag ggacgctgcg gcacgtcacg
      301 ctgaaggttc gtctctcctc ggaggcgttc gcggggggcg gaacgttcct cgccgtcacc
      361 tgttcggccg aagcgaaacg gtttcccggc atctccctcg ttgcgatcct tcgggccggg
      421 gtggattccg cgacggtccg tttcccggac atcgcccccg ggacgtccgc cacccgcgtc
      481 gtcccgttcc ggccctccct gcgggggaaa gtcgattcga tccacgcctc actctcgacg
      541 cggttcccgt tttccctgtt cgagaaatcg gtcgaactcg acgttcccgc ccgcatcctc
      601 gtctaccccc ggccgtcccc tcccgcgacg cgtggcgaag accttccggt cgcggccccg
      661 tcgggacgcc cgttcctgtc cggtcgggcc agcgccttcc cccggggagt gcgggagcac
      721 ctcccagcgg accccgtgcg cgacatccac tggaaggcga cggcgcggag aggacgctgg
      781 atggtcaagg agcgggaagc ggaagccacg ccggcgatcg acctttgggt ggaagagggt
      841 ggcacgcagg aggcgttcga agaccggctt tcggatgcgt gcggcgccgt gctggaactc
      901 gagcgacggg ccgtcccgtt ccgactacgg atcggagacc ggctttgcgc cgaatcgcac
      961 gacccggatc ggcgatcgaa ggccctcgag gccctcgcga aagcgcggtt cgacccggcg
     1021 ccgccggtga cgccaccgtg acccgccgct tcccgacacg ggagttcctc tggtggtcgc
     1081 tgcgcgcaca ctgggcgctc gccctcgcac tcctcgccct cttcaccgac gcggcgcgat
     1141 gggccctcct gctcgccgcc tttgcctggg ccggcggcgt ggcgatggat cgggcggaca
     1201 cgccgcgcgc caccctctcc cggctcggat cgccgatcgt cgccctcttc cttgccgcgt
     1261 ccgctgcaga cttcctgttc ggaagccgtg acctcctcgc ctccctttcg ctgctcgtgc
     1321 tcggggtgca gtcggtgaag ttcctcctcc cgaagggaag ccgggacgga tggcagctgt
     1381 gcgccgttgc actcctcgag tttctcgccg ccgcctccgg gaccgacgcg ctggtcttcg
     1441 ccctcttctc gttcctcttt ttcgtcgcct ccgccggcgc gatgggagcc ctccacgacc
     1501 aggaggcgga agaggcgggg cgccccccgt gcggctacgc cgcccctgtg cggaccgcgg
     1561 cc
//
LOCUS       DATGYW010000083         1824 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_380992, whole genome shotgun sequence.
ACCESSION   DATGYW010000083 DATGYW010000000
VERSION     DATGYW010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_380992"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..960)
                     /locus_tag="VK429_01090"
     CDS             complement(34..960)
                     /locus_tag="VK429_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015246942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="HLN90435.1"
                     /translation="MSAVRKEGPGKFAVALVQMAMGTDPRENLEKGMERVREAARRGA
                     QVVCLPELFRTRYFCQTEETAFFDLAEPLPGPTTYALSAVARDSGIVVIAPVFERRAP
                     GVCHNSAAVIDADGTIAGVYRKMHIPDDPAFYEKFYFTPGDLGFRAFDTRAGSIGTLI
                     CWDQWYPEGARLTALAGASVLFYPTAIGWHPREKQEHGERQRDAWRTVQRGHAVANGV
                     YVAAVNRVGKEVPGGGDGIEFWGSSFICDPQGAVLAEASADREEILFAEVDLARIEEV
                     RRNWPFLRDRRIDAYGGITSRVLDGEPWGKAR"
     gene            complement(957..1583)
                     /gene="leuD"
                     /locus_tag="VK429_01095"
     CDS             complement(957..1583)
                     /gene="leuD"
                     /locus_tag="VK429_01095"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011628973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HLN90436.1"
                     /translation="MIETFVRLNAVGVPLDRGNVDTDAIIPARYLKTLKRTGLGVGLF
                     FAWRYDAGGAELPDFPLNRPEFRGGEVLVAGENFGCGSSREHAVWALMDFGFRAVIAP
                     SFSDIFHNNCLKNGMLPVTLPAAEVRSMIDALLAAPGGKVEVDLPAQTVRGPGGDIHP
                     FRIDPFAKKCLLEGLDEIALTLTSASEIDRYERERKKATPWLFLDLAG"
     gene            complement(1580..>1824)
                     /locus_tag="VK429_01100"
     CDS             complement(1580..>1824)
                     /locus_tag="VK429_01100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006116497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HLN90437.1"
                     /translation="EEGLDRVFVEAGFQWRLPGCSMCLGMNPDRLKPGERCASTSNRN
                     FEGRQGPGGRTHLMSPAMAAAAAVSGRIADVREVAR"
BASE COUNT          274 a          688 c          586 g          276 t
ORIGIN      
        1 ctcgtaatgg gccggccgtc cccgccgcgg cggtcaccgc gccttccccc acggctcgcc
       61 gtcgaggacg cggcttgtga tcccgccgta ggcgtcgatc cgccggtccc gcaggaacgg
      121 ccagttccgg cgtacctcct cgatgcgggc aaggtcgacc tcggcgaaaa ggatctcctc
      181 ccggtccgcg gacgcctccg cgaggaccgc gccctgcgga tcgcagatga acgaggagcc
      241 ccagaattcg atcccgtcgc cgccgccagg gacctccttc cccacccggt tgaccgccgc
      301 cacgtagacg ccgttcgcga cggcgtgccc ccgctgcacg gtgcgccagg cgtcgcgctg
      361 ccgctctcca tgctcctgct tttcgcgggg gtgccagccg atcgccgtcg ggtaaaagag
      421 gacgctcgcc ccggcgaggg ccgtcaggcg cgccccttcc gggtaccact ggtcccagca
      481 gatgagggtg ccgatcgatc ccgcgcgggt gtcgaaggcg cgaaagccga ggtcccccgg
      541 ggtgaagtag aacttctcgt agaacgccgg gtcgtccggg atgtgcatct tccggtagac
      601 cccggcgatc gtcccgtcgg cgtcgatcac cgcggcgctg ttatggcaca cccccggggc
      661 gcggcgctcg aagaccgggg cgatcacgac gatccccgaa tcccgcgcca cggcggaaag
      721 ggcgtacgtg gtcggccctg gaagcggctc cgctagatcg aagaaggccg tctcctcggt
      781 ctggcagaag taccgggtac ggaacagttc gggcaggcac accacctgcg ccccccggcg
      841 agccgcctcg cggacccgtt ccatgccctt ttcaaggttc tcacgcgggt ccgtccccat
      901 cgccatctgg acgagggcga ccgcgaactt ccctggtcct tccttccgga ccgcgctcat
      961 ccggcgagat ccagaaaaag ccacggcgtc gccttcttcc tctcccgctc gtaccggtcg
     1021 atctccgatg cgctcgtgag ggtcagggcg atctcgtcca acccctcgag aaggcacttc
     1081 ttcgcgaagg ggtcgatccg gaaggggtgg atgtcgcccc ccgggcccct gaccgtctgc
     1141 gcgggcagat ccacctcgac cttgccgccc ggcgcggcca ggagggcgtc gatcatcgat
     1201 cgcacctccg ccgccggaag cgtcacgggg agcatcccgt tcttcaggca gttgttgtgg
     1261 aagatgtcgc tgaacgacgg ggcgatcacc gcgcggaaac cgaagtccat caacgcccac
     1321 acggcgtgct cgcgcgagga gccgcagccg aagttctcgc ccgccaccag gacctcgccg
     1381 ccccggaact ccggccggtt cagcgggaag tcgggcagct ccgctccccc cgcgtcgtat
     1441 cgccacgcga agaagagccc gacgcccagc cccgtccgct tcagcgtctt caggtaccgc
     1501 gccgggatga tggcgtcggt gtcgacgttc ccacggtcga gggggacgcc cacggcgttc
     1561 aaccgcacga acgtttcgat catcgcgcca cctcccgcac gtcggcgatg cggccggaaa
     1621 ccgccgcggc ggccgccatc gcggggctca tcaggtgcgt ccgccccccg ggtccctgcc
     1681 gcccctcgaa attccggttc gacgtcgagg cgcaccgctc gccgggtttc aggcggtccg
     1741 ggttcatccc gaggcacatg gagcaccccg gaagccgcca ctggaacccg gcctcgacga
     1801 agacccggtc gagtccctct tcct
//
LOCUS       DATGYW010000084         1898 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_435595, whole genome shotgun sequence.
ACCESSION   DATGYW010000084 DATGYW010000000
VERSION     DATGYW010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435595"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VK429_01105"
     CDS             <1..180
                     /locus_tag="VK429_01105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90438.1"
                     /translation="PVGAARLWYGDKPVGYVASLPVSEPLRTEHVLHAIVHSHGTEFL
                     SAYFDSEIWNREEGH"
     gene            444..1376
                     /locus_tag="VK429_01110"
     CDS             444..1376
                     /locus_tag="VK429_01110"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLN90439.1"
                     /translation="MVVCTRDRPRSLRRCLASLMRLDPGAGEVIVVDNASLTEETREI
                     VTRTPFRYVREERPGLNWARNRGAGEARYDIVAYVDDDVRVDSGWIRGIARGFHSPDV
                     DAVTGLVVPAEMETRPQHLFEIYGGMGKGMEARRFQGASMSHRALIRVQDVGVGANMA
                     FRRPRLENLGGFDTALDVGTPSCGGGDLDMFQRVLVSGGTLRYEPSAVVWHYHRRDFE
                     GLRRQLYCNGRSYGVYLIKNWRDGRIGRIPLSSFVLFQWLPWLIGRLGLGIFRRHRLP
                     MRLLWAEFRGAIDSPWAYMKTYQHDRNVRKKITA"
BASE COUNT          339 a          552 c          625 g          382 t
ORIGIN      
        1 ccggtggggg cggcgaggct ttggtacggc gacaagccgg tcggctatgt cgcatccttg
       61 cccgtttcgg agcccctgcg gaccgaacac gtcctccatg ccattgtcca ctcacacgga
      121 accgagttcc tttcggcgta ctttgacagt gaaatatgga accgggagga agggcactga
      181 aaaccttcat cgccgaatac gatctcgacc gcccggttcg agccgtctgg ggcctccagg
      241 ggtataccca agggatcatt ctcgttcgga aggccgggca accgatcgat ctgctgtggt
      301 tgccccatga cccttgccgg tttgcgctca caggccggga gatcgaacag aacgtctacg
      361 gccggcttgg gatttccccg gcgatacggg tttcttccgg aatgtccggg gaggacccaa
      421 cggagtcgct tccggagatc agcgtggtcg tctgcacacg ggaccggccg cgatccctgc
      481 gccgttgcct ggcttccctg atgcggctcg atcccggagc cggcgaagtc atcgtggttg
      541 acaacgcgtc cctcacggag gaaacgaggg aaatcgtaac aaggactcct ttccggtacg
      601 ttcgtgagga gcggccggga ctgaactggg ctcgaaaccg gggggcgggc gaggcaaggt
      661 atgacatcgt cgcgtacgtg gatgacgatg tccgggtgga ttcgggctgg atccggggca
      721 tcgcccgtgg tttccattcc cccgatgtcg atgccgtaac cggcctcgtg gttcccgccg
      781 agatggaaac ccggccccag cacctgttcg agatctacgg cgggatgggc aaaggaatgg
      841 aagcgcggcg cttccagggc gcttccatgt ctcaccgcgc gctcatccgc gtgcaggacg
      901 tcggtgtggg ggcgaacatg gcgtttcggc gcccgcgtct cgagaacctt ggggggtttg
      961 atacggccct ggacgtgggg acgccctcgt gcgggggcgg cgatctcgac atgttccagc
     1021 gggtgctcgt ctcgggaggg acgctgcgat acgagccgag cgccgttgtc tggcactatc
     1081 atcgccgcga cttcgagggt ctgcgccggc agctatattg caatgggcgc tcctacgggg
     1141 tttacctgat caagaactgg agggacggcc gcattgggag aatccctctc tcctccttcg
     1201 ttcttttcca gtggttgccc tggctcatcg ggcgcctcgg gctgggaatc ttccggcgcc
     1261 accgccttcc catgcggctc ctgtgggcgg agttccgtgg agccatcgat tctccgtggg
     1321 cctatatgaa aacgtatcaa cacgaccgca atgtccggaa aaaaatcacc gcgtgatgag
     1381 cctgtctatc atcattcccg cttcgatacg atccgcatga atacacgaag gaaagaaaat
     1441 tgaatggaag gacggggtgt gcgccatctt gtgcatcctc ttataccttg agcgggggga
     1501 cggaagggaa acggacggag cgtatccggt cgcttgaacg gatcgggatt gcgttcgtcc
     1561 tgttccttgc ctcgatactg ctgatcggga ttccctcccc ggaagcgtcc cagtccaagg
     1621 tggggccgag caggaccctg gaattccgct accgggctcc cgaagccggc gaagtcttcc
     1681 ttgtctgggg gattgagggc tggcaggccg taccggagag ggaacaaccg ccggggacta
     1741 cgatacggaa ccgggtgatg ctcacaccca tggtccgccg ggggagcagt ttccaggcca
     1801 atgtgcaggt tgttcccggc gtttcggtcg aatacgggtt tctggtcaca aaaacctgcg
     1861 acggattgga actcgaggtc cgcccggttt gggatggc
//
LOCUS       DATGYW010000085         2114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_113992, whole genome shotgun sequence.
ACCESSION   DATGYW010000085 DATGYW010000000
VERSION     DATGYW010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113992"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..621
                     /locus_tag="VK429_01115"
     CDS             <1..621
                     /locus_tag="VK429_01115"
                     /inference="COORDINATES: protein motif:HMM:NF015948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF362 domain-containing protein"
                     /protein_id="HLN90440.1"
                     /translation="AGARSVRVFDRTCNDARRCYVNSGIKDAVERFARKNRVEDALRI
                     YHVEDRKFVRTSIPNALSIKEWDLYRDALEADKIVNVPIAKHHSLAGITLGLKNMMGI
                     MGGNRGQIHYRLPECLVDIHRRVPVALTVIDAGRVLLRNGPSGGNLADVKSFGKAFAS
                     RDVVAADVVAAETTFRLAPRDVGHIAKAMESGLGVSSRAQIRLVEG"
     gene            633..989
                     /locus_tag="VK429_01120"
     CDS             633..989
                     /locus_tag="VK429_01120"
                     /inference="COORDINATES: protein motif:HMM:NF017239.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqqD family peptide modification chaperone"
                     /protein_id="HLN90441.1"
                     /translation="MIVPKRNPEVVWRLEKGLHEIAWEKARKEEEYEDLGVLTLLVKG
                     EIRQLNLVGAEIWTRLNGINTLRKISAEVSALFSWELEEAEGAVLEFLRGIEEKGWVT
                     LVERPETSPAPGRRAD"
     gene            1051..>2114
                     /locus_tag="VK429_01125"
     CDS             1051..>2114
                     /locus_tag="VK429_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90442.1"
                     /translation="MNRLQRKSLMLLLVAGIAGGVFITGCASKDVRQEAVATVNGDPI
                     KGAELREFLGVPAGVFAVVDIPVEKKKEALDQLVAVRLLAQEGRSRGIDNTSQYKEIL
                     QRNDQLVRIKALVRKEIEAKLKVTDKEIKAEIAKVKEANKGISDADAAIRAAKSVSGS
                     QVQKIQEDLIAAAKKDTAAAVDPKAVARIGKEENVPDNVVLASAGDEKILYGDVKKIL
                     RGLSPGGVPKGQPDLSKNPVLVGNVLERELTMRALAAYAKKQGVDGSEGYKAMRQEME
                     RYVLRGMLADNVAAKNVEVTDKEIEAAYTEHSATMVRDGKKVPLAMVKEQIRAALRNE
                     KGKKVIEAYIDDLKKKAKITV"
BASE COUNT          453 a          579 c          774 g          308 t
ORIGIN      
        1 gcaggcgccc ggtcggtgcg cgtcttcgac cgcacctgca acgacgcgcg gcgctgctac
       61 gtcaacagcg ggatcaagga cgccgtggag cggttcgcgc ggaagaatcg ggtcgaggac
      121 gcgctgcgga tctatcacgt cgaggaccgg aagttcgtcc gcacgtccat tccgaacgcg
      181 ctgtcgatca aggagtggga tctttaccgg gacgcgctcg aagcggacaa gatcgtcaac
      241 gtgccgatcg cgaagcatca ctcgctggcc ggcatcacgc tcgggctcaa gaacatgatg
      301 gggatcatgg ggggaaaccg gggccagatc cactaccggc tgccggagtg cctcgtggac
      361 atccaccgcc gggtcccggt cgccctcacc gtgatcgacg cggggagggt cctcctgcgg
      421 aacggcccct caggtgggaa cctcgcggac gtgaaatcgt tcgggaaggc gttcgcctcc
      481 cgggacgtgg ttgcggccga cgtggtcgcg gccgaaacga ccttccgcct ggcgccacgg
      541 gacgtcggac acatcgcgaa agcgatggag tcgggcctgg gggtttcttc ccgcgcgcag
      601 atccgcctcg tcgaggggtg agggggagcg ggatgatcgt accgaaacgg aaccccgagg
      661 tggtctggcg cctcgaaaag gggttgcacg agatcgcgtg ggagaaggcg cgcaaggagg
      721 aggagtacga ggaccttggc gtgctcaccc ttctggtcaa gggagagatc cgccagctga
      781 atctcgtggg cgcggagatc tggacccgcc tgaacgggat caatacgctc cgtaaaatct
      841 ccgcggaggt ctcggcgctc ttctcgtggg aattggaaga ggcggaaggg gcggtgctcg
      901 aattcctccg ggggatcgag gagaaagggt gggtgacgct cgtggagagg ccggagactt
      961 cgccggctcc cggacggcgc gccgattgaa ctccatcccc gggttatggt gtaatcacac
     1021 gctttcagac gatcgaaggg agaaacgaac gtgaatcgac tgcagaggaa gtccctgatg
     1081 cttctcctcg tggcgggaat cgccgggggg gtattcatca cggggtgcgc aagcaaggac
     1141 gtacgacagg aggcggtcgc cacggtgaac ggcgatccga tcaagggggc cgaactcagg
     1201 gagttccttg gcgttccggc cggcgtgttc gcggtggtgg acatcccggt ggaaaagaag
     1261 aaggaagccc tcgaccagct ggtggcggtg aggctcctgg cccaggaggg ccgctcgcgc
     1321 gggatcgaca acacgtccca gtacaaggag atcctccagc ggaacgacca gttggtccgg
     1381 atcaaggcgc tggtgcgcaa ggagatcgag gcgaagctca aggtgacgga caaggagatc
     1441 aaggcggaga ttgccaaggt caaggaggcg aacaagggga tctccgacgc ggacgccgcg
     1501 atacgcgcgg cgaaatcggt ctccgggagc caggtacaaa agatccagga agacctgatc
     1561 gccgcggcga agaaggatac cgcggccgcg gtggacccga aggcggtggc ccggatcggc
     1621 aaggaggaga acgtgcccga caacgtcgtt ctcgcctccg ccggggacga gaagatcctc
     1681 tacggcgacg tcaagaagat cctccgtggc ctgtcgccgg ggggcgtacc gaaaggacag
     1741 cccgaccttt cgaaaaaccc ggtgctggtc ggaaacgttc tcgagcggga actgacgatg
     1801 cgggcacttg cggcgtacgc gaagaagcag ggagtcgacg gctccgaggg atacaaggcg
     1861 atgcggcagg aaatggagcg gtacgttctc cgcggcatgc tggccgacaa tgtcgccgca
     1921 aaaaacgtcg aggtcacgga caaggagatc gaggcggcat acacggaaca ctccgcgacg
     1981 atggtgcggg acggtaagaa ggtcccgctg gccatggtga aggagcagat ccgggcggcg
     2041 ttgcggaacg aaaaggggaa gaaggtgatc gaggcgtaca ttgacgactt gaagaagaag
     2101 gcgaagatca cggt
//
LOCUS       DATGYW010000086         1681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_435774, whole genome shotgun sequence.
ACCESSION   DATGYW010000086 DATGYW010000000
VERSION     DATGYW010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435774"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..536
                     /locus_tag="VK429_01130"
     CDS             <1..536
                     /locus_tag="VK429_01130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011194957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN90443.1"
                     /translation="QNIRLFRELTVVDNVRIAHHPHVRYGPVDALLRTGAFYREERRT
                     REQVEEYLSIFSLQDRRKELAKNLPYGDQRKLEIARALASCPKILLLDEPAAGLNPFE
                     VGTLMEFLLGIRERFSLTVLLIEHQMRLVMGICERLIVMDFGQVIAQGLPAEIRRDPK
                     VIEAYLGRRDDTAGRRN"
     gene            552..1277
                     /locus_tag="VK429_01135"
     CDS             552..1277
                     /locus_tag="VK429_01135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003801461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN90444.1"
                     /translation="MLLTVDHLSVFYGPVQAIRDVSFTVGKGEIVTLIGANGAGKSTT
                     LRALSGVVRTEAGSIVHDGKSIAGLPSHRIARLGIAHVPEGRGVFANMSVRENLEMGG
                     YTRSSRKEVEESFERVFALFPRLAERGSQFAGTLSGGEQQMLAIGRGLVQHPDLLLLD
                     EPSMGLSPVLVSEIFRMIEEINKEGTTILLVEQNASMALAIADRAYVLEAGAIALEGK
                     ASDLQEDPKVRAAYLGEETGVEK"
     gene            1274..>1681
                     /locus_tag="VK429_01140"
     CDS             1274..>1681
                     /locus_tag="VK429_01140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013164783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF523 domain-containing protein"
                     /protein_id="HLN90445.1"
                     /translation="MTNRIKILVSACLLGEKVRYDGGHKRDHFLNETLGPFVEWVRVC
                     PEVDCGLPVPREAMRLVGDPNRPRLVTSRTGIDQTERMERWAKARLDALSSLDLCGYI
                     CKKDSPSSGMERVKVYGGDGIPARTGAGVFTRMF"
BASE COUNT          318 a          480 c          591 g          292 t
ORIGIN      
        1 tccagaacat ccgcctcttc agggagttga cggtggtgga caacgtgcgg atcgcgcacc
       61 acccgcacgt ccggtatggg cccgtcgacg ccctgctccg gaccggagcg ttttaccggg
      121 aggaacggcg gacgcgggag caggttgaag aatatctctc gatcttttcc ctccaggatc
      181 ggcggaagga gcttgcgaaa aacctgccgt acggcgatca acggaaattg gaaatagccc
      241 gcgccctcgc gtcgtgcccc aagattctcc tgctggacga gcccgcggcc ggattgaacc
      301 cgttcgaggt gggcacgctg atggagttcc ttctcgggat ccgggagcgg ttctccttga
      361 ccgtcctgct gatcgagcac cagatgcgcc tggtgatggg gatctgcgag cggctgatcg
      421 tgatggactt cggccaggtg atcgcccagg gtctacccgc ggagatccgg agggacccga
      481 aggtgatcga ggcgtacctc gggagaagag atgacaccgc cgggagaaga aattaggaaa
      541 cgggtgagac attgctatta accgtcgatc atctaagcgt attttatgga ccggtccagg
      601 cgattcggga tgtctccttc accgtcggga aaggggagat cgtcaccctt atcggtgcga
      661 acggggcggg taagagcacc accctgcggg cactctccgg cgtcgtccgt accgaagcgg
      721 ggagcatcgt gcacgatggg aaatcgatcg cgggcctccc gtcccaccgg atcgcacgcc
      781 tcgggatcgc ccacgtcccg gagggtcgcg gcgtcttcgc caacatgagc gtccgggaga
      841 acctggagat gggggggtac acccgctcct cgagaaagga ggtggaggag agcttcgaac
      901 gggtcttcgc cctcttcccc cggctggccg aacgcgggag ccagttcgcc gggaccttgt
      961 ccgggggaga gcagcagatg ctggccatcg ggaggggtct tgtccagcac cccgacctgc
     1021 tgcttctcga cgagccgtcc atggggttgt ccccagtgct ggtgagcgag atcttccgga
     1081 tgatcgagga gatcaacaag gagggaacaa cgatcctgct tgtcgagcag aacgcctcca
     1141 tggccctcgc catcgcggat cgtgcctacg tcctcgaggc gggggcgatt gcactcgaag
     1201 ggaaggcgtc cgatctgcag gaggatccga aggtgcgggc cgcctacctg ggagaggaga
     1261 caggagtgga aaaatgacga ataggatcaa gatcctggtc agcgcctgcc tcttggggga
     1321 gaaagtacgc tacgacggcg ggcacaagcg ggaccacttc ctgaacgaaa cgctgggtcc
     1381 cttcgtcgag tgggtgcggg tctgcccgga ggtcgactgc gggcttcccg tcccgcgtga
     1441 ggcgatgcga ctcgtcgggg atccgaaccg gccgcggctg gtcacgagcc ggaccgggat
     1501 cgatcaaacg gagcggatgg agcggtgggc gaaggcccgg cttgacgcgt tgtccagcct
     1561 cgatttatgc gggtatatct gcaagaagga ttccccgagt tcggggatgg agcgggtgaa
     1621 ggtgtacggc ggcgacggga tcccggcgcg gaccggtgcc ggggtcttca cccggatgtt
     1681 c
//
LOCUS       DATGYW010000087         1543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_220696, whole genome shotgun sequence.
ACCESSION   DATGYW010000087 DATGYW010000000
VERSION     DATGYW010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220696"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1019)
                     /locus_tag="VK429_01145"
     CDS             complement(<1..1019)
                     /locus_tag="VK429_01145"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF045194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HLN90446.1"
                     /translation="MTVLYPVPEILPDPRARFIQIVHTCHALATRGVRVHLLAGIRRG
                     CDGEGLLRDYGLSPVPFLRIVPLPVLRGRISWHAPFHAALLPRAMREPDGVIFVRYLK
                     LAGFLLRWRRAHRLPVIFEAHEIFHKTTERPGKAATLKAMESFVYREADRLITISNVL
                     SEDLRELFGRPADAVIPDGVPSDFLEIRREVPGNGILYVGQLYPWKGVDVLLRAMSRI
                     PDERLVVVGGGGESLDRAKRIAGEEGVAERVDFRGTVPHVEVRSFLGATRVAVVPNRA
                     EGVSKYTSPLKLFEAMAAGVPIVASDLPSLREVLRDGENALLVPPGEPEALAGAIRRL
                     LQDTAL"
     gene            complement(1016..>1543)
                     /locus_tag="VK429_01150"
     CDS             complement(1016..>1543)
                     /locus_tag="VK429_01150"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase C-terminal domain-containing
                     protein"
                     /protein_id="HLN90447.1"
                     /translation="LYTPFLRENRWGAAGYWEPRLRRAAGLDRYLYADQTSFLPEDVL
                     FKVDICSMMNSLECRSPLLDHKLVEFAATLPAAYKLRGKEGKYILKEAFRDWFAPGFF
                     EGPKVGFAAPTHLWLKGDRKEWCREMILGCLPLGRLLRPEAIERLFGDEETHHKRIWC
                     LLALAEWINAMGVRV"
BASE COUNT          280 a          523 c          499 g          241 t
ORIGIN      
        1 agggcagtgt cctgcaggag ccggcggatg gcgcctgcca gcgcctccgg ttccccgggg
       61 gggaccagga gcgcattctc cccgtcccgc aacacctccc gcagcgatgg gaggtccgag
      121 gcgacgatcg ggacacctgc cgccatggct tcgaaaagtt tgaggggaga ggtgtacttc
      181 gacacgcctt ccgcacggtt ggggacaacg gcaacccgtg tggcgcccag gaagctgcga
      241 acctccacgt gagggacggt gccccggaaa tcgacccgtt ccgcgacccc ctcttctccg
      301 gcgatccgtt tcgcccggtc gagggactcc ccgcccccgc ccacgacgac gagacgttcg
      361 tccgggatgc gggacattgc gcggaggagc acatccaccc ccttccaggg gtacagctgc
      421 cccacgtaca ggatcccgtt cccgggtact tccctgcgga tctccaggaa gtccgatgga
      481 acaccgtccg gtatgaccgc gtccgcggga cgcccgaaca gctcccgcag gtcctccgac
      541 aggacgttcg atatcgtgat caggcggtcg gcttcccggt agacgaaaga ctccatcgct
      601 ttcagggtgg cggccttccc cggacgttcg gtcgtcttgt ggaagatctc gtgggcctcg
      661 aagatcacgg ggagacggtg ggccctgcgc cagcggagga ggaacccggc gagcttcagg
      721 taccggacga agatcacccc gtcgggttcc ctcatcgcgc gcggaaggag cgctgcgtgg
      781 aagggtgcgt gccaggagat cctgccgcgc agaaccggca acgggacgat ccggaggaac
      841 gggacaggcg aaagaccgta gtcccgcagc agcccttccc catcgcaacc gcgccggata
      901 cccgccagga ggtgaacccg cacgccacgg gtcgccaagg cgtggcatgt gtgcacgatc
      961 tggatgaacc gcgcccgggg atccggcagg atctcgggga ccggatagag taccgtcata
     1021 cccggacgcc catcgcattg atccattccg ccagggcgag gagacaccag atccgcttgt
     1081 ggtgggtctc ctcgtctccg aaaaggcgct cgatcgcttc gggacgcagg agccgtccga
     1141 gcggcaggca cccgaggatc atttcacggc accactcctt ccgatcccct ttcagccaca
     1201 ggtgcgtcgg cgcggcaaac cccaccttcg gcccttcgaa gaaacccggg gcgaaccagt
     1261 ccctgaatgc ctccttcagg atgtatttcc cctccttccc gcgcagcttg taggcggcgg
     1321 gcaaggtcgc cgcgaactcg acgagtttat ggtccagcag gggagaccgg cattccaggg
     1381 agttcatcat gctgcagatg tccaccttga agaggacatc ctccggaagg aagctcgtct
     1441 ggtccgcgta caggtaccgg tccaggccgg cagcccggcg gagcctcggc tcccagtagc
     1501 ctgcggcccc ccaccggttc tcgcggagaa acggggtgta cag
//
LOCUS       DATGYW010000088         2690 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_163816, whole genome shotgun sequence.
ACCESSION   DATGYW010000088 DATGYW010000000
VERSION     DATGYW010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2690)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2690)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2690
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163816"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VK429_01155"
     CDS             <1..216
                     /locus_tag="VK429_01155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004081023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HLN90448.1"
                     /translation="AKKAAKAAVPAGPVNLNTASKEQLVALPGIGEKKAQAIIDGRPY
                     QKTEDIMKVKGIKQGIYNKIKDKITVQ"
     gene            248..529
                     /locus_tag="VK429_01160"
     CDS             248..529
                     /locus_tag="VK429_01160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007417770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90449.1"
                     /translation="MKKMLLIVCAVLLVTSLAFAGAPKTYQVTGPVLEVKDDLIVVQK
                     GKDRWEIARGADTKVTGDLKVGSKVTIEYRMTAATVEVKDAKAKETKKK"
     gene            567..1016
                     /gene="mscL"
                     /locus_tag="VK429_01165"
     CDS             567..1016
                     /gene="mscL"
                     /locus_tag="VK429_01165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HLN90450.1"
                     /translation="MLKEFKEFAMRGNVIDMAVGIIIGAAFGTIIATLVSDVLMPPIG
                     LLLGNVDFANLFLVLKEGKIAGPYATVAAAKGAGAVTLNYGLFLNTVVNFLIVAFAIF
                     FVIRGMNSMKKKEEAPAPTTKECPHCLSTIPIKATRCGHCTSELRAA"
     gene            1145..>2690
                     /locus_tag="VK429_01170"
     CDS             1145..>2690
                     /locus_tag="VK429_01170"
                     /inference="COORDINATES: protein motif:HMM:NF026177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLN90451.1"
                     /translation="MAGLSEFREDILMRIRKIRVRNSIAIPILLVLLSIALVVLVTGY
                     YVNKSVFYSVFEERESNKARNIHLTIESIVATEVKRISSIAKILKNDTDIVYGLFHYT
                     GTHGDTKPLKSAMDQLYPKMNLSVFAMADPGGNILYRAGKGKDLPEGRLRELPAFRQA
                     LKGEQVITASLGPGAGGIWAIVPVYSFGKEKPSGMIFLGSRIDNTFARRIAQETGSQV
                     FIATAERVIAGSYESPLHKGFDSSLAKSSLAARKPIFQMDRANYRSYMYVPMNIVDNE
                     FCLVIETDISVIRDLLAKNRIKMMEWGIVLLFGIALIGIVLTLTLIWPLNRLYGKALH
                     VIREYSGTGLDAAPRGNEITTLVWANDVMLESIKNHLSERTRAEEALREISRTLQALI
                     EASPLAVVVSDASGMVRVWNPAAVRLFGWREEEAVGHPNPLLSPEGNPELCVTCNLVL
                     RGEKFSNTEIPARRCDGSEVILAFSGAPLTDAGGNVVAMMAIVADISDAKRAESALRK
                     SEEQLRQ"
BASE COUNT          599 a          781 c          835 g          475 t
ORIGIN      
        1 gcgaagaagg cggccaaagc cgcggttccc gcagggcccg tcaacctcaa cacggcgtcg
       61 aaggagcagc tggtggcgct gccggggatc ggcgagaaaa aagcgcaggc catcatcgac
      121 gggcggccgt atcagaagac cgaggacatc atgaaggtca aggggatcaa gcaggggatc
      181 tacaacaaga tcaaggacaa gatcacggtc cagtgacccg aatccacaac caaaaggagg
      241 attaccgatg aagaagatgc tgttgatcgt ttgcgccgtc ctgctcgtca cctcgctcgc
      301 cttcgcggga gcgccgaaga cctaccaggt gacgggcccc gtcctcgagg tcaaggacga
      361 cctcatcgtg gtgcaaaagg ggaaggacag gtgggagatc gcccggggag ccgacacgaa
      421 ggtcacgggg gatctgaagg tcggctccaa ggtgacgatc gagtacagaa tgaccgccgc
      481 caccgtcgag gtgaaggacg cgaaggcaaa ggaaacgaag aagaagtaac ccatcaacga
      541 agcagacacc ggagagggga tcggacatgc tgaaggagtt caaggaattc gccatgcggg
      601 ggaacgtcat cgacatggcg gtgggcatca tcatcggcgc ggccttcggg acgatcatcg
      661 ccacgctggt atccgacgtc ctgatgccgc cgatcgggct cctcctgggg aacgtcgact
      721 tcgcgaacct cttcctcgtg ctcaaggaag ggaagatcgc cggcccctac gcgacggtcg
      781 ccgccgccaa gggggcggga gcggtgacgc tcaactacgg gctgttcctg aacaccgtcg
      841 tcaatttcct gatcgtcgcc ttcgccatct tcttcgtgat ccgcggcatg aactccatga
      901 agaagaagga agaggccccc gcgccgacga cgaaagagtg cccgcattgc ctgtcgacca
      961 tcccgatcaa ggcgacgcga tgcggccact gcacctcgga actcagggcc gcatagaggc
     1021 aaacggtttt tccggcacgg cattccccgg gacgacgggg aatgccgtgc ttttcatatg
     1081 aagatacgac aggttatcgc cgataagcac cccggggata ttgcgttttc cacgaggagc
     1141 ggtgatggcc ggtttatcgg agttccgtga agatatcctg atgcgaatcc ggaagatccg
     1201 cgtccggaat tccatcgcaa tccccatcct gctggtcctc ctctccatcg ccctggtcgt
     1261 tcttgttacc gggtattacg tcaacaaatc cgtcttttac tccgtcttcg aggaaaggga
     1321 gagcaacaag gcccgcaata tccacctgac gatcgagtcc atcgttgcca cggaggtcaa
     1381 gcggatctcg agtatcgcga agatcctcaa aaacgatacg gacatcgtgt acgggctgtt
     1441 ccattacacc ggcacgcatg gcgacacgaa acccctgaaa tccgcgatgg atcagctcta
     1501 tccgaagatg aacctttcgg tctttgccat ggcggatccc ggcgggaaca tcctgtaccg
     1561 tgccgggaag ggaaaggacc tgccggaggg gagacttcgg gagttgcctg cgtttcgaca
     1621 ggcgttaaaa ggcgaacagg tcatcaccgc cagcctgggg ccgggagcgg ggggaatatg
     1681 ggccatcgtt cccgtctaca gtttcggcaa ggagaagccc tccggaatga tcttcctcgg
     1741 gagtcggatc gacaacacgt tcgcgagaag gatcgcccag gaaaccggaa gccaggtgtt
     1801 catcgcgacc gccgaacgcg taatcgcggg ttcgtacgaa agcccccttc acaagggatt
     1861 cgactcttcg cttgcgaaga gcagcctcgc cgcgcggaaa ccgatttttc agatggaccg
     1921 cgccaattac cggtcgtaca tgtacgtccc catgaatatc gtcgacaacg agttctgtct
     1981 tgtgatcgag acggacatca gcgtcatccg ggacctcctg gcgaaaaacc ggatcaagat
     2041 gatggagtgg gggatcgtcc tcctgttcgg catcgccttg atcgggatcg tcctcacgct
     2101 caccctcatc tggccgctga accggctgta cggaaaggcg ctccacgtca tccgtgaata
     2161 ctccgggacg ggactcgatg ccgctccccg gggaaacgag atcacgacgc ttgtctgggc
     2221 gaacgacgta atgctggaga gcatcaagaa ccacctttcg gaacggaccc gggcagagga
     2281 ggcgttgcgg gagatcagtc gcaccttgca ggccctgatc gaggcgtctc ctttggccgt
     2341 ggtcgtcagc gacgcttccg ggatggtgcg tgtttggaac cctgccgccg tccgcctgtt
     2401 cgggtggcgg gaagaggagg cggtcggcca cccgaaccct ctcctttccc cggaagggaa
     2461 cccggagttg tgtgtgacct gcaatcttgt cctgcgggga gagaaattct ccaacacgga
     2521 gatccccgcg cggcggtgcg acggatcgga ggtcatcctt gccttctcgg gagcgcccct
     2581 caccgatgcg ggtggaaacg tagtcgccat gatggcgatc gtcgccgaca tcagcgatgc
     2641 gaaacgggcg gagagcgctt tgcgaaaaag cgaggaacag ctccgccaat
//
LOCUS       DATGYW010000089         2255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_328621, whole genome shotgun sequence.
ACCESSION   DATGYW010000089 DATGYW010000000
VERSION     DATGYW010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2255
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_328621"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1965
                     /gene="acsB"
                     /locus_tag="VK429_01175"
     CDS             <1..1965
                     /gene="acsB"
                     /locus_tag="VK429_01175"
                     /EC_number="2.3.1.169"
                     /inference="COORDINATES: protein motif:HMM:NF007078.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA decarbonylase/synthase complex
                     subunit alpha/beta"
                     /protein_id="HLN90452.1"
                     /translation="TDLRVATLADAGKVLDLAGTLVRDGATAENAVDAGAATLLAADV
                     IGAVSHENGNPFMPPATGFVSDSTLRKLGIYLVDGSVPGVAVVIGKATDPAAAAAMVR
                     RFQEIGLLVFLAGDVVPQLDAQGVKLGEDFKTFPLGPLPAVIHAVNFAVRAGLTFGGI
                     GRGQGAAMLSYLGNRVKAFVCALGPLDDVALAIAAGAMKAGLTVLSDQPVPEIPGLLL
                     SRPAGDGMVQAGMEARGIKVKMVKVPIPIAFGPAFEGERIRKSDTHVEFGGGRSVAYE
                     LVRSAPPEEVHDREIVVDGPDLRGLPIGSVLPLGIVVRVAGARMQHDFESVLERRIHR
                     IVNYGEGTMHVAQRDTTWIRVSTEAVEKGFSLADLGLMLYAKLHADFENIVDKVSVSI
                     TTRPEDVQAGLAGARAAYAERDARARTLTDDAVSEFYSCTLCQSFAPNHVCIVSPERL
                     GLCGAINWLDGKAGFEITPTGPNQPVLKGAVRDAVKGSFDGVNAFVRENSRNTVTEMN
                     LYSIMESPMTSCGCFECVLAVIPEANGVMAVNREFTGQETPCGMGFSTLAGSVGGGVQ
                     TPGFMGVGKHYLLSRKFLGAEGGLARVVWMTREMKEYLGPLLRERAAEIGMPDLVDQI
                     ADETVAVTPDALVEHLVKVGHPALKLPPLL"
     gene            2010..>2255
                     /locus_tag="VK429_01180"
     CDS             2010..>2255
                     /locus_tag="VK429_01180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90453.1"
                     /translation="MTLPAGPGGTPVTVGGQNALPLLPEGEHPNAPAVGMEVRTGPLE
                     LPPALAGTIGDFAGDPVVMARKCAGDWGARFLFLSLSG"
BASE COUNT          340 a          760 c          809 g          346 t
ORIGIN      
        1 accgacctcc gggtggcgac cctggccgac gcggggaagg tgctcgacct cgcggggacg
       61 ctcgtgaggg acggcgccac cgcggaaaac gcggtcgacg ccggcgcggc cacgcttctc
      121 gccgcggacg tgatcggcgc cgtctcccac gagaacggca accccttcat gcccccggcg
      181 acgggcttcg tatccgattc gaccctgcga aaactcggga tctatctggt ggacggctcc
      241 gttcccgggg tcgccgtggt gatcgggaag gcgacggacc ccgcggccgc ggcggcgatg
      301 gtccggcggt tccaggagat cgggctcctc gtgttcctcg cgggggacgt cgtcccgcag
      361 ctcgacgcgc agggagtgaa actcggagag gatttcaaga cgttcccgct ggggccgctg
      421 ccggcggtga tccacgccgt caacttcgcc gtacgcgcgg ggctcacctt cgggggaatc
      481 ggccgcggcc agggagccgc gatgctctcc tatctcggca accgcgtgaa ggcgttcgtg
      541 tgcgccctcg gacccctgga cgacgtcgcc ctggcgatcg ccgccggcgc gatgaaggcg
      601 gggctgacgg tcctgtccga ccagcccgtg ccggagatcc cggggctgct cctctcgcgt
      661 cccgcgggcg acggcatggt ccaggcgggg atggaggcgc ggggcatcaa ggtgaaaatg
      721 gtcaaggtgc cgatccccat cgccttcggt cccgccttcg aaggggagcg gatccggaag
      781 tccgacacgc acgtcgagtt cggcggcggc cgctccgtgg cctacgaact cgtgcgcagc
      841 gcccccccgg aagaggtaca cgaccgggag atcgtcgtgg acggccccga tctccggggg
      901 ctgcccatag ggagcgtcct accgctgggg atcgtcgtcc gggtcgccgg cgcgcggatg
      961 cagcacgact tcgaatcggt cctcgagcgc cgtatccacc ggatcgtcaa ttacggcgag
     1021 gggacgatgc acgtcgcaca gcgggacacc acctggatcc gcgtctcgac ggaagcggtg
     1081 gagaagggat tctccctcgc ggacctcggc ctgatgctct acgccaagct ccacgcggac
     1141 ttcgagaaca tcgtggacaa ggtgtcggta tcgatcacga cccgaccgga ggacgtgcag
     1201 gcggggctgg ccggggcgcg ggccgcctac gccgagcggg acgcgcgggc gcgcacgctg
     1261 accgacgacg ccgtctccga gttctactcc tgcacattgt gccagtcgtt cgcccccaac
     1321 cacgtctgca tcgtctcccc cgagcgcctc gggctgtgcg gagcgatcaa ctggctcgac
     1381 gggaaggcgg ggttcgagat caccccgacc ggccccaacc agccggtgct gaagggagcg
     1441 gtccgggacg ccgtgaaggg atcgttcgac ggggtgaacg cgttcgtccg ggagaattcc
     1501 cgcaacaccg tgaccgagat gaacctctat tccatcatgg agtcgccgat gacctcgtgc
     1561 ggctgcttcg aatgcgtcct ggccgtcatc cccgaggcga acggcgtgat ggcggtcaac
     1621 cgcgagttca ccggacagga aacgccgtgc gggatggggt tctccaccct ggccggttcc
     1681 gtcgggggcg gcgtgcagac cccgggcttc atgggcgtgg ggaaacatta cctgctgagc
     1741 cggaaattcc tcggggccga gggaggcctt gcgcgcgtcg tctggatgac ccgggagatg
     1801 aaggaatacc tcggtccgct gctgcgggag cgggcggcgg agatcgggat gcccgacctc
     1861 gtcgatcaga tcgcggacga aacggtcgcg gtgacgccgg acgcgctcgt cgaacacctg
     1921 gtgaaggtgg gacaccccgc cctcaagctc cccccgctgt tgtgagcgtg gcgcttccca
     1981 tcccggtctt tcccgggagg atcctcgcgg tgacgctgcc cgccggcccg gggggaactc
     2041 cggtcaccgt gggagggcag aacgccttgc cgctcctgcc ggagggggaa caccccaacg
     2101 cacccgcggt ggggatggag gttcgcacgg ggccgctgga gctccccccc gccctggccg
     2161 ggacgatcgg ggacttcgcc ggagaccccg tcgtgatggc ccgcaagtgc gcgggcgact
     2221 ggggagcgcg cttccttttc ctttcccttt ccggt
//
LOCUS       DATGYW010000090         3384 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_274135, whole genome shotgun sequence.
ACCESSION   DATGYW010000090 DATGYW010000000
VERSION     DATGYW010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3384
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_274135"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..461)
                     /locus_tag="VK429_01185"
     CDS             complement(<1..461)
                     /locus_tag="VK429_01185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012646747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLN90454.1"
                     /translation="MVPTTDFRRRAAEKTIQYLVLPAMLLAVWQVLFQTGFLRAMTLP
                     PPTRLARTFLELLENGQLLRHVEISVLRVLEGFALASLLGTILGVGIGLSGKLDRLTD
                     LVLQLMKPIPPIAWIPMAILWFGIEEASKIFIIFMGAFFPILVNVTDGIRQT"
     gene            complement(639..929)
                     /locus_tag="VK429_01190"
     CDS             complement(639..929)
                     /locus_tag="VK429_01190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90455.1"
                     /translation="MMGKGWIRVLIVAFVAIAAAILWIAQPDVATAAKMEAAVDGQNL
                     EVSERILFPITPGEQTQKIAAIDPGPVIVFEGSWCALVGGRWIAYPPDTVCP"
     gene            complement(1008..1373)
                     /locus_tag="VK429_01195"
     CDS             complement(1008..1373)
                     /locus_tag="VK429_01195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90456.1"
                     /translation="MGRKSMVLFLVAFMVFVGTNVYAGSHMVVVFDVESGDVVNVYDA
                     KTSGVIEKGKITFEGEVAAKDSVKDKDFTVNKRGVGKTASKIKDRNGIPDYTVILSNA
                     SPGCTTYTYNGYSWTVCGP"
     gene            complement(1492..>3384)
                     /locus_tag="VK429_01200"
     CDS             complement(1492..>3384)
                     /locus_tag="VK429_01200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HLN90457.1"
                     /translation="LKQSVNRPVEALQDLQRSISLNDNRAVYRSRLLLDEDLAARSAS
                     LGRIYDDLGFQQLALVEGWKSVNTDPANYSAHRFLADSYSALPRHEVARVSELLQSQL
                     LQPININPVQPQFAESKRLILGGTGPASPSFNEFSPLFNRNRLALQASGVVGNQKTVG
                     DEVVLSGLWNRFSGSVGQYHYETDGFRTNDDLTDDVFNIFLQGSLTSKTSIQAEYRYR
                     DTEKGDRTLRFDPDNYSQALRQEDKSNSARFGFLHGLSPGSDLIGSFIYRHADDALRD
                     TNPIVSVDWKTEEKSYIAELEYLYRSERLNVNVGAGRSEIDSTIQRDGVIFVPFPPFE
                     LPISETVDERPRHTNAYLYSRIALPGNVNLTLGASGDFYKDEFVERNQFNPKLGLTWS
                     PLPGTTIRAAAFRTLKRTLNTDQTIEPTQVAGFNQFFDDFNGTTFWRYGAAVDQAFSS
                     DLSGGAEYAWRDLNYTNALVTSAGTVLRDIDWDERTGRAYLYWTPRPWVAVRAEYFYE
                     WLDRGTVATLDGIDQVTTHRFPVGASFFHPCGATAGVKATYIDQNGRFVPEFGEEGVP
                     GEQGADRFWLVDATAGYRLPNRWGIVTLEGKNLFDQSFRYQDTDHDNPSIQPSRTVVF
                     RFTLSI"
BASE COUNT          672 a         1018 c          966 g          728 t
ORIGIN      
        1 gtctgccgga tcccgtcggt cacgttgacg aggatgggga aaaaagctcc catgaagatg
       61 atgaagatct tcgacgcctc ctcgatgccg aaccagagga tggccatggg gatccacgcg
      121 atgggaggga tcggcttcat cagctggagg acaaggtccg tcaaccgatc cagttttccg
      181 gacaacccaa tacctacccc caggatcgtc cccaagaggg aggcgagagc gaacccttcc
      241 aggacccgga ggacgctgat ctcgacgtgg cggaggagct gcccgttctc aagcagttcg
      301 aggaaggtgc gggcaagacg ggtcggaggc ggcagcgtca tggcccggag gaatccggtt
      361 tggaagagga cctgccagac cgcaaggagc atggccggca ggaccagata ttggatcgtc
      421 ttctccgcgg cgcgtcgacg gaagtccgtg gtcgggacca tggcgggcac ctccttcccg
      481 tgttgcctcc accgtcgcac gggggaagtg acggatcagt tacggattag tggaaaaagg
      541 agggagggta taactaaccg aaagaaataa aaaaagcccg gcggagagcc gggcttttcg
      601 aagcgattgt tccaacccgg aacggatccc atcactcctt acggacagac ggtgtcggga
      661 ggataagcga tccacctgcc cccgaccaaa gcgcaccagc ttccttcgaa aacgatcacc
      721 ggtccggggt cgattgccgc gattttttgg gtctgttctc ccggtgtgat gggaaagagg
      781 attctttcgg aaacttccaa attctgtcca tccacggcgg cttccatttt cgccgcggtc
      841 gccacatcgg gttgggcaat ccacagaatc gctgccgcaa tcgccacgaa cgccacgatg
      901 agtaccctga tccatccctt gcccatcacc tctcctgact gcctcgacat ggctttcttc
      961 tttcatgatt ggataaaaag ttatccgaat catcctatta acattcttta tgggccgcag
     1021 accgtccaag agtaaccgtt atatgtgtaa gtagtgcatc cgggacttgc attgctgaga
     1081 atcacggtat agtccggaat gccgttcctg tccttgatct tggaagccgt tttccccact
     1141 cctcttttgt tgaccgtgaa atccttatcc tttacggagt cttttgcagc aacctccccc
     1201 tcgaatgtga tttttccttt ttcaataact ccgctggttt ttgcatcgta aacgttgact
     1261 acgtccccgc tttctacatc aaaaacaacc accatgtgtg atcccgcata aacgtttgtt
     1321 cccacgaaca ccatgaaagc gactaagaaa agtaccatgg atttcctgcc catctccccc
     1381 tcctctcgat tgtcttgcgt tccctgcatg tgaccacctc ctggacgccg gcaaccacgt
     1441 tccggattct tggcgactcc ctcctttctg aagggcagat ccctcccctt ttcagatgga
     1501 caacgtgaac cggaaaacga ctgtacgcga gggctgaatc gaaggattgt cgtggtccgt
     1561 atcctgatac cggaacgatt ggtcgaacag gttcttcccc tccagggtca ctatccccca
     1621 tcgattcgga aggcggtacc cggccgttgc atccacaagc cagaaccggt cggcgccttg
     1681 ctcgcccggg acgccttcct ccccaaactc cgggacgaat cttccgttct ggtcgatata
     1741 ggtggctttg accccggcag tcgcgccgca agggtggaag aaactggccc ctacaggaaa
     1801 gcggtgcgtg gtgacctgat cgatgccgtc gagggtggcg acggttcccc ggtccagcca
     1861 ctcataaaag tattcggcgc ggaccgcaac ccacgggcgc ggcgtccagt acaggtaggc
     1921 gcgtcccgtc cgctcgtccc aatcgatgtc ccgcaggaca gtccccgctg aggtaacgag
     1981 tgcattcgtg tagttcagat cccgccatgc gtattccgct cccccggaca ggtccgagga
     2041 gaatgcctgg tcgaccgccg cgccgtatcg ccagaatgtc gtcccgttga agtcgtcgaa
     2101 gaactggttg aaccccgcca cctgggtcgg ctcgatcgtc tggtccgtat tcagcgtcct
     2161 cttcagcgtg cggaatgccg ccgcgcggat ggtggttccc gggagcgggc tccaggtcag
     2221 ccccagcttc gggttgaact ggttcctttc gacgaactcg tctttgtaga agtcgccgct
     2281 tgcgcccagt gtgaggttca cgttgcccgg cagcgcgatc cgggagtata gatacgcgtt
     2341 cgtatggcga ggacgttcgt cgacggtctc gcttatcggg agctcaaacg gcgggaaggg
     2401 gacgaaaatg acgccatccc tttgaatcgt ggaatcgatt tccgatcttc ccgctccgac
     2461 gttcacattc aggcgttccg agcggtacag atattcaagt tcggcgatgt aacttttctc
     2521 ttccgtcttc cagtcaaccg atacgatggg atttgtatcc cgcagagcat catctgcatg
     2581 ccggtagatg aacgaaccga tgagatccga cccgggggaa aggccgtgca ggaacccgaa
     2641 cctcgccgag ttgctcttgt cctcctgccg cagcgcttgg gaatagttgt ccggatcgaa
     2701 ccgcagggta cgatccccct tctccgtatc ccggtaccgg tactccgcct ggatgcttgt
     2761 tttactcgta aggcttccct ggaggaagat gttgaagaca tcgtcggtca ggtcatcgtt
     2821 cgtccggaaa ccgtccgtct cgtaatggta ctgccccacg cttccggaga accggttcca
     2881 caagccggaa aggacgacct cgtcccccac cgttttctgg ttcccgacca cgccgctcgc
     2941 ttggagcgcc aggcggttcc ggttgaacag ggggctgaat tcgttgaacg agggggaagc
     3001 gggaccggtt ccgccgagga tcaaccgctt gctctctgcg aattggggct gcaccgggtt
     3061 gatgttgatc ggctggagca gctgcgactg cagcagctcg cttacccggg cgacctcgtg
     3121 ccggggcagc gcgctgtagg agtccgccag gaaccggtgc gcggaatagt tcgccgggtc
     3181 ggtgttgacc gacttccacc cttccaccag tgccagctgc tgaaagccca agtcgtcgta
     3241 gatcctcccg aggctcgcgc tacgggccgc caggtcctcg tccagaagga ggcgggaccg
     3301 gtagaccgcc cggttgtcgt tcagggagat cgaccgctgc aggtcctgca gggcctccac
     3361 cggccggttc acggactgtt tcag
//
LOCUS       DATGYW010000091         1629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_221473, whole genome shotgun sequence.
ACCESSION   DATGYW010000091 DATGYW010000000
VERSION     DATGYW010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_221473"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            527..721
                     /locus_tag="VK429_01205"
     CDS             527..721
                     /locus_tag="VK429_01205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90458.1"
                     /translation="MATFTVYSVDKVHERKVQVGTVVERRRTDRGNNIVGLLKLAANR
                     FKLSPGQKIQVKFGGILVEL"
     gene            756..935
                     /locus_tag="VK429_01210"
     CDS             756..935
                     /locus_tag="VK429_01210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90459.1"
                     /translation="MKTYTVYRFDYIRLVREPVGELVERRSKDRGNNTEALLRLAQRL
                     YSTSSLDSHLIITPE"
     gene            984..1181
                     /locus_tag="VK429_01215"
     CDS             984..1181
                     /locus_tag="VK429_01215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90460.1"
                     /translation="MGKVYKVYRVDYLTKVEIPVGTVTERRNQSRGTASYFGLMKLAR
                     KMFAQSPEDQVRITIGEEHTA"
     gene            complement(1188..1628)
                     /locus_tag="VK429_01220"
     CDS             complement(1188..1628)
                     /locus_tag="VK429_01220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012527142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA deacylase"
                     /protein_id="HLN90461.1"
                     /translation="MRAAGSAYTEHPYDYEEKGGTAVSARELGVDEHSVVKTLVMEDD
                     RKRPLIVLMHGDREVSTKELARAIGVRSVAPCSPEGAHRHSGYIVGGISPFGTRHPMQ
                     VYMEGTILDLPKIYINGGRRGFLVGMNPGDVARILSTIPVRVAI"
BASE COUNT          353 a          483 c          473 g          320 t
ORIGIN      
        1 gtaagacctt gaaaccttta cggggcgagg gttcgcgccg catttcgtaa tcagcaggtc
       61 gtcggttcaa tcccgaccgc cggctccatg aaatcaagga caaaaagggc ggtgtacgaa
      121 ccgttgatac gtcgaatcga ctccgcagat gtgaaaatct tttccgtttt actggataag
      181 acggccgcaa ttaagggaaa aattgccgtc ggattcgaca accggaaatt ttcgtagcca
      241 acccattgaa attgaaagga tttaccgcag cacccctttg gcattccctt tgctttatat
      301 acgggcatga acttcgtccc tgtatatagg ctctgccgat ccaacgggtc gttctcgcgg
      361 atcggttccc tgctggaacc ttgccagcag tggaacaccc aaatataccc acacatcctg
      421 aagcaggcga tggcactctt cgaacaaggt cccggggata cgatccttct cggtccccgg
      481 tgcgaaccga ttcggagaga cgcctttacg gatgaagggg gatgagatgg cgacattcac
      541 cgtctacagt gtcgacaagg ttcatgagag gaaggtgcag gtgggaacgg tcgtggagcg
      601 caggagaaca gatcgcggaa acaacatcgt cggattgttg aaactcgctg caaaccggtt
      661 caagttgtcg cctggtcaga agatccaggt caagttcggg ggtatcctcg tcgagctgta
      721 agtcaaggga ttcacctccc ttggggagga tgcgcatgaa gacctacacc gtttatcgat
      781 tcgattacat tcgcctggtg agggagccgg tcggggaact ggtcgaacgg cggagcaagg
      841 accgggggaa taacaccgag gctctcttaa ggctggcgca acgattatat tccacctcgt
      901 cgctggattc gcacctcatc atcactccgg aataggggga gcactccccg ttccgggaaa
      961 gaccggcgac gaaggggcat cggatgggga aggtttataa agtgtaccgg gtcgactacc
     1021 tcaccaaggt ggagatcccg gtcggaaccg tcaccgaacg gaggaaccag tcgcggggta
     1081 ccgccagcta cttcggcctc atgaaactcg cccggaagat gttcgcgcaa tcccccgagg
     1141 accaggtgcg gatcaccatc ggggaagagc atactgcctg aaccgcatca gatcgcaacg
     1201 cgcacgggga tcgtcgacag gatccgcgcg acgtcccccg gattcatccc cacaaggaac
     1261 ccgcggcgcc ctccgttgat gtagatcttc ggaaggtcga ggatcgttcc ctccatgtag
     1321 acctgcatcg ggtgcctcgt cccgaacggc gagatccccc cgacgatgta ccccgagtgc
     1381 ctgtgggcgc cctccgggga gcatggcgcc acgcttctta cgccgatcgc ccgggcgagc
     1441 tccttcgtcg acacctcgcg gtccccgtgc atcaggacga tcagcggccg cttccggtcg
     1501 tcctccatca cgagcgtctt caccacgctg tgctcgtcga ctccgagctc ccgcgcggac
     1561 acggccgtcc cgcccttctc ctcgtagtcg tacgggtgct cggtgtacgc cgatccggcc
     1621 gcccgcaga
//
LOCUS       DATGYW010000092         1605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_114947, whole genome shotgun sequence.
ACCESSION   DATGYW010000092 DATGYW010000000
VERSION     DATGYW010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114947"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..940
                     /gene="aroC"
                     /locus_tag="VK429_01225"
     CDS             <1..940
                     /gene="aroC"
                     /locus_tag="VK429_01225"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HLN90462.1"
                     /translation="NWREKMAQDGDGEGIPKLDTARPGHADLPGVLKYGHGDVRNVLE
                     RASARETAARVMAGSLAKAILRELGVDIVGHVLSIGKYRVTAGIEGNRIAAARAEGSP
                     LRMADPGVEAEVKRWIDELKEAGTTAGGVVEVIAGGVPPGLGSYVAWDRRLDGRIGQA
                     LMCIPAIKGVEIGGGVGLAGMPGIDVHDEVFPGGNPAAPFLGKYLLPFHRDTNRAGGL
                     EGGMTNGEPVVVRAAMKPIPTQSVPLRTVTVDRFIASTAHRERSDVCAVPAASVVAET
                     MVAIVLADAFLEKFGGDAMRDILYNYSGYLRRICGE"
     gene            937..1476
                     /locus_tag="VK429_01230"
     CDS             937..1476
                     /locus_tag="VK429_01230"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013534454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004765 - shikimate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HLN90463.1"
                     /translation="MNRGAAFPGVVLVGFMGSGKSSVGRELSRRFGAPFVDVDERIES
                     ATGSTIRDLFAREGEPAFREREKAALRDALSVKGCVIATGGGAFSDEENRVLLRSYAP
                     VVYLEAAVETLLERLAGDLGRPLLRGADREEVVRELLSRRVPGYRTADVTVRTDGRTV
                     EEVAGQVADWIDRTEGRTG"
BASE COUNT          249 a          469 c          629 g          258 t
ORIGIN      
        1 caactggcgg gagaagatgg cacaggacgg ggacggggag gggataccga agctcgacac
       61 cgcccgcccc gggcacgcgg accttcccgg cgtactgaaa tacgggcacg gagacgtccg
      121 gaacgtgctc gagcgggcga gtgcgaggga gaccgccgcg cgggtcatgg ccggttcgct
      181 ggcgaaggcg atcctccgcg aactcggggt cgacatcgtc ggccacgttc tctcgatcgg
      241 caagtatcgg gtgacggccg ggatcgaggg aaatcgcatc gcggccgcgc gtgcggaggg
      301 gagcccgctg cggatggcgg acccgggggt cgaggccgag gtcaagcggt ggatcgacga
      361 attaaaggag gccggcacga cggccggggg ggtcgtcgag gtgatcgccg ggggggtccc
      421 tccgggtctc gggtcgtacg tcgcctggga ccggcgtctc gacggccgga ttggacaggc
      481 gctgatgtgc atccccgcca tcaagggggt ggagatcggc ggcggggtgg gactggccgg
      541 gatgccgggg atcgacgttc acgacgaggt gttcccaggc gggaacccgg cggcgccgtt
      601 cctcgggaaa tatctgctgc cgttccatcg ggacacgaac cgggccgggg ggctggaggg
      661 ggggatgacc aacggggagc ccgtggtcgt ccgtgccgcg atgaagccga tcccgacaca
      721 gtcggtacct ctccggacgg tcacggtaga ccgtttcatc gcctcgaccg cgcatcgcga
      781 gcgcagcgac gtctgcgccg tccccgccgc gtccgtggtc gccgagacga tggtggcgat
      841 cgtcctggcc gacgccttcc tcgagaaatt cgggggcgat gcgatgcggg atatcctcta
      901 taattattcc ggctacctgc gacgcatctg cggggaatga accgcggcgc ggcgttcccg
      961 ggagtcgtgc tggtcgggtt catggggtcc gggaaaagtt ccgtcggccg ggagttgtca
     1021 cggaggttcg gcgcgccgtt cgtcgacgtg gacgagcgga tcgagtcggc gaccggatcc
     1081 accatccggg atctgttcgc gcgggagggg gagccggcgt ttcgcgagcg ggagaaagcg
     1141 gcccttcgcg atgccctctc cgtgaaggga tgcgtgatcg cgacgggagg cggggcgttc
     1201 tccgacgagg agaaccgggt tctcctccgt tcgtacgccc cggtggtcta cctcgaggcc
     1261 gccgtggaaa cccttctcga gcggcttgcc ggggatctcg ggcgtccgct gcttcgcggg
     1321 gcggatcggg aagaggtggt gcgggagttg ctgtcgcgca gggtccccgg atatcgcacc
     1381 gccgacgtca cggtgcggac cgacgggcga acggtggagg aagtggccgg gcaggtggcg
     1441 gattggatcg accggacgga gggacggacg ggttgaatcc tgaaacgatg acggtggccc
     1501 ttggcgaccg ttcctacgac atcttcttcg gcagggggat ctactccctg ttccaggaat
     1561 ggatctgccg cttttatccc ggcgggaccg tccatgtagt gaccg
//
LOCUS       DATGYW010000093         2248 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_114973, whole genome shotgun sequence.
ACCESSION   DATGYW010000093 DATGYW010000000
VERSION     DATGYW010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114973"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..696
                     /gene="nuoB"
                     /locus_tag="VK429_01235"
     CDS             <1..696
                     /gene="nuoB"
                     /locus_tag="VK429_01235"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF005012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HLN90464.1"
                     /translation="MPAGDLPAPFRGMPVINMAFRTGNVAETCAKVCATEAIDPEKKT
                     IDLGRCVFCGLCEEACDGEGIRFSQDPRLPWGKREHLLLGGPPVPPATASNDLRSLLG
                     RSLHLREVSAGGCNGCDLEAQALGNPIFDMQRFGIDFVASPRHADGLLVTGPVSKNMR
                     EALVKTFEAIAEPRIVIAIGACAASGGIFRGSYAVENGVGGVLPVDLFIPGCPPHPLT
                     LLYAILGFLGRSP"
     gene            1399..1821
                     /locus_tag="VK429_01240"
     CDS             1399..1821
                     /locus_tag="VK429_01240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90465.1"
                     /translation="MIIVKSTEEALKMIREMDGESHLVEDEPYLIEEDRAHTHDGLTM
                     IDGSGNRYVIHPVSGEIGIYMGISSTKAVEKWTEAGGRDWDTICERTSVLSRGESEHK
                     DIMKEVIVHLLRTIASTGLQPYDKYNNPVRIAGRRDVG"
     gene            1952..2179
                     /locus_tag="VK429_01245"
     CDS             1952..2179
                     /locus_tag="VK429_01245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90466.1"
                     /translation="METCMVYLVNKQRASKIPVGTLMERRGAERGNNIAGLLKLAAIR
                     FNVLLGQTIQINFRGICAEMEIRAVKGFRPK"
BASE COUNT          508 a          630 c          672 g          438 t
ORIGIN      
        1 atgccggcgg gtgacctccc ggccccattc cgcgggatgc cggtgatcaa catggcgttc
       61 cggacgggga acgtcgccga aacgtgcgcg aaggtgtgcg cgacggaggc gatcgacccg
      121 gagaagaaga cgatcgacct cggaaggtgc gtcttctgcg gcctctgcga ggaggcgtgc
      181 gacggcgagg ggatccgctt ttcgcaggac cctcggctcc cctgggggaa acgggagcac
      241 ctgctcctcg gaggcccccc cgttccccct gcgacggcat ccaacgatct ccgctccctg
      301 ctcggccggt cgctgcacct gcgggaggtg tccgccggcg gctgcaacgg ctgcgacctc
      361 gaagcgcagg cgctcgggaa cccgatcttc gatatgcagc ggttcgggat cgatttcgtc
      421 gcctcgccac ggcacgcgga cggcctgctg gtcaccggtc ccgtgtcgaa gaacatgcgg
      481 gaggcactgg tgaagacctt cgaggcgatc gcggagcccc ggatcgtcat cgccatcggg
      541 gcgtgcgccg ccagcggcgg aatcttccgg ggatcgtacg ccgtcgaaaa cggcgtggga
      601 ggcgtgcttc cggtcgacct gttcatcccc ggttgcccgc cccaccccct caccctgcta
      661 tacgccatcc tgggtttcct cggccgctcc ccttaaagaa agccgcagga tttacccgac
      721 ggcctggtcc cttcgcgtcc cttcccaatt cactccaact aactaaagac gctcttgccg
      781 atccccgctt ttcccgcttt cggggaaggt tcctccaacg catccgtcac gatatccacg
      841 ggcataggca acgacgtggg aatcaccgtc atatctgccg gcaatttcgt gaaggtgatc
      901 atggtcgcgg taggatgccc acgtattatc ctggaaacgg aacctgatcc cctcacgata
      961 cccccgccag tattccgccc gcctcggttc ggactgcgcg atcatctgat cgatcgggcg
     1021 gatcagagtt atgaattccg atggatccaa ctctccccct tggcccaagc gaaaaacggg
     1081 tccttagggg tatatcggca gatgcgggtg gaatcttcgg gagcaggtaa gacaaaggga
     1141 gatacaatgg ggcagccgat acgtaggacc tggtgggttc ggtttctttc gttcccaaga
     1201 tgtaccgccc gtgcagttcg cgccacttgc ggttagtacc cacccttagc gcctctcggc
     1261 aattattttc ccaataaggt gcaatccctc caccgataca tcctcatgaa agttaaacgg
     1321 ttcgcatttt caactggtta aatacacacc atctaccggt gcgaatattg cagggataac
     1381 aactatgggg acgcaaccat gataatcgtg aaaagtacgg aagaagcgtt gaagatgatc
     1441 agggaaatgg acggtgaatc acatcttgtg gaggatgaac cgtatctgat agaggaagac
     1501 agggcgcaca cgcacgacgg gttaaccatg atcgatggtt ccgggaaccg ctatgttatt
     1561 catccggtat ccggggagat cgggatctac atggggattt cgtccaccaa agcggtagaa
     1621 aagtggacgg aggcaggggg gagggactgg gacacgatct gcgagaggac aagtgtattg
     1681 tcacggggcg aatcggagca taaggacata atgaaggagg taatcgtgca cttgctacga
     1741 acgatagcgt ctacgggact ccaaccgtac gataaatata ataaccccgt acgaattgca
     1801 gggagaaggg acgtcggata gagaagaata ccctccctgc tccagatgtg tttacgtgga
     1861 tgtgggaacg gaggaggatg aagaagtaga cgatcccaca gattctaaca atagggcgtg
     1921 gggcataccg tccgcacggg agaccagtta aatggaaacc tgcatggttt atctcgtcaa
     1981 caaacagcgg gcgtcgaaga tcccggtagg caccctcatg gagcgcaggg gggcagaacg
     2041 cggaaacaac atcgccggtt tgctgaagct tgccgcaatc cgattcaatg tactattggg
     2101 ccagacgatc cagatcaatt tcaggggtat ctgtgccgag atggagatac gcgccgtaaa
     2161 aggatttcga cccaaataat aatggagttt cccgcgatgg acggggccgc aaaccccgcc
     2221 ctttggagat attcgacgga tgcggatt
//
LOCUS       DATGYW010000094         2579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_115038, whole genome shotgun sequence.
ACCESSION   DATGYW010000094 DATGYW010000000
VERSION     DATGYW010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2579
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115038"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(327..1448)
                     /locus_tag="VK429_01250"
     CDS             complement(327..1448)
                     /locus_tag="VK429_01250"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HLN90467.1"
                     /translation="MYRKVIAPFIACTLLAFLAYLVYRLAQPFLAAIGVGVVLTVITF
                     PLYERLRRKIGGRDGVAATLMVLLILFLLVAPAVGLIGALGQQATDVYRWGEKAAGQD
                     KLVQRILDTLDAYRGHPILGRGVEWVRPQIEAFATNAEQTVPEAMKKLIGAVTGMLTS
                     ILANVLTFLLNLILALAAMGIFYARGESLLGEVIALVPLPRGRTRELFARLGMVMKAV
                     VKGVGLTCLAQGALGGVGFWVAGIPSPLLFGTVMAFMGLIPVVGTAIVWVPGVLYLFF
                     TGQTTWAVGLLLWCALVVGNIDNVLRPLLIGGKAGMPLPLLIVGILGGLFSFGLMGLI
                     IGPLVLTVLLFVLEEYHREFPDAEESLPQVAPGPPPAQG"
     gene            complement(1636..2238)
                     /locus_tag="VK429_01255"
     CDS             complement(1636..2238)
                     /locus_tag="VK429_01255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90468.1"
                     /translation="MRRTGIALLAGLFVFSIAAGGCATAPAGKSAGTGESPSWQTSSV
                     VEETATVMAVNQSTRMVTLKGPEGNSITFKASDEVRNLAQVQVGDEVKFAYYESVAVR
                     VLKAGEAFPAAGESTAMSRAKPGEKPAGVVGTETTVNATITAIDKKAKTATLMGENGK
                     SVTVTPLRPEKLDEVKVGDRLVITYTEAVAVRVEKAEKKQ"
     gene            complement(2311..>2579)
                     /locus_tag="VK429_01260"
     CDS             complement(2311..>2579)
                     /locus_tag="VK429_01260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HLN90469.1"
                     /translation="SEATRVTEEMFFAAAKTLAAMVTDEDRATGRIYPGLDRIREVSS
                     AIAVAVAEVVFRRGLTKMNRPADLAGHVKSQMFDPTYVEYTPRR"
BASE COUNT          462 a          903 c          768 g          446 t
ORIGIN      
        1 acgaggccgt gatctcgggg gccaggttgt actgcatcag ggagagagcg ccattcacac
       61 gctcctggag ccgggtgccg gtcaccgtga actcgctcct cgccgttccg gacgcaaaca
      121 ggatcccgag ggcaaggacc accgcaaggg cattccgcgg gcgcaccccc gtgccgattg
      181 aggcggatcg attcaattcg ttcgcatttc ccttctcacc cccgcggcca tgccatccac
      241 agtaaattca aaccgattcc atttccagtc cgtttcggtg cgtcccggga tgcgagcgcg
      301 tccggatgca aggagcggcg catcgtctac ccttgtgcgg gcggcggtcc gggagcgacc
      361 tgggggaggg attcctccgc gtcgggaaac tcgcggtggt actcctccag gacgaacagg
      421 aggacggtca gtaccagcgg gccgatgatc agccccatga gcccgaagga gaacaaccct
      481 ccgaggatgc cgacgatcag caggggcagg ggcatgccgg ccttcccgcc gatcagcagg
      541 ggtcgcagca cgttgtcgat gttgccgacc accagggcgc accagaggag caatcccacg
      601 gcccaggttg tctgacccgt gaagaacagg tagagcaccc ccgggaccca gacgatcgcg
      661 gtcccaacca ccgggatcag ccccatgaac gccatcaccg tgccgaagag gagcggagaa
      721 gggatcccgg cgacccagaa gcccaccccc ccgagggccc cttgcgcgag gcaggtcagc
      781 cccacccctt tcaccaccgc tttcatgacc atcccgaggc gggcgaacag ctcccgggtc
      841 cgcccgcggg gaagcggaac aagcgcgatc acctccccga gcagggactc cccccgggcg
      901 tagaatatgc ccatggccgc cagcgcgagg atcaggttga ggagaaacgt cagaacgttc
      961 gccaggatcg aggtgagcat gccggtgaca gcgccgatca gcttcttcat cgcctcgggc
     1021 accgtctgct ctgcattcgt ggcaaacgcc tcgatctgcg ggcggaccca ctcgaccccc
     1081 cggccgagaa tcgggtggcc ccggtacgcg tcgagcgtgt ccaggatgcg ctgtaccagc
     1141 ttatcctgac ccgccgcctt ttcgccccaa cggtagacgt ccgtcgcctg ctggcccaag
     1201 gcgccgatca gacccacggc gggggcgacc agaaggaaga ggatcagcag gaccataaga
     1261 gtcgccgcca ccccgtctct cccgccgatt ttccgccgga gccgctcgta cagggggaag
     1321 gtgatcaccg tgaggaccac cccgacaccg atcgcggcca ggaacggctg ggcgagccgg
     1381 tacacgaggt acgcgaggaa ggcgagcagg gtgcaggcga tgaacggtgc gatcactttt
     1441 cggtacatgg cttcctccgc gtttcctgta aaactataag tatacctccc atggaatggg
     1501 ggacaaaccg aacccgtgcg ggcatgatca attcttgtgg atgaaactgc aggggggtgc
     1561 ggaccgtcgc ccgccccccc ctacctgccg ctccggatac cgcgcatgcg gccgttccgc
     1621 cgcgtgcgta cggggctatt gcttcttttc cgccttctct acccttactg cgaccgcttc
     1681 cgtgtacgtg atcaccagcc ggtcccccac cttgacctcg tcgagtttct ccgggcgcaa
     1741 cggggtcacc gtcacggact tcccgttctc ccccatcagg gtcgcggtct tcgccttctt
     1801 gtcgatggcc gtgatcgtgg cgttgacggt cgtttccgtc ccgacgaccc ccgccggctt
     1861 ctcccccggt ttcgcgcggg acatcgccgt gctctcgccc gccgccggga acgcctcccc
     1921 cgccttcagc acgcgcaccg cgacggattc gtagtaggcg aatttcacct cgtcgcccac
     1981 ctgcacctgc gccagattcc tcacttcatc actggccttg aaggtgatcg agttcccctc
     2041 cggccccttc agggtgacca tccgggtcga ctggttcacc gccatgaccg tagccgtctc
     2101 ctcgaccacc gaggatgtct gccaggaagg agattccccc gtaccggcgg atttacccgc
     2161 cggcgccgtc gcgcaccctc ctgccgcgat cgaaaaaacg aacaaccccg caagcaacgc
     2221 aattccggtt ctcctcatga acattcccct ccttgttgta ttgtccgttc gatgcccgga
     2281 catgcggccg tttcggccgt aacgtcgatc ctatcgcctc ggagtgtact ccacgtaggt
     2341 cgggtcgaac atctgcgact tcacatgccc ggcaaggtcg gccggacggt tcatcttcgt
     2401 caatccccga cggaagacca cttccgccac ggcgacggcg atcgcggagg agacttcccg
     2461 gatccggtcg agaccgggat agatgcggcc tgtggcacgg tcctcatccg tgaccatcgc
     2521 cgcaagggtt ttcgccgcgg cgaagaacat ctcttccgtg acacgggtcg cttcgctgg
//
LOCUS       DATGYW010000095         2233 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_3710, whole genome shotgun sequence.
ACCESSION   DATGYW010000095 DATGYW010000000
VERSION     DATGYW010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2233
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3710"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..186)
                     /locus_tag="VK429_01265"
     CDS             complement(<1..186)
                     /locus_tag="VK429_01265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90470.1"
                     /translation="MVLPAVQCISAIFQFVAAWQSVVFLSTGRLGRVWSFVSLALFLK
                     GLLSLWVVFSSPWSMVTP"
     gene            379..1764
                     /locus_tag="VK429_01270"
     CDS             379..1764
                     /locus_tag="VK429_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011985532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HLN90471.1"
                     /translation="MANGARNDSIVRGFALSSVFWLLVGLLIGLWLAAEMVYPALNLA
                     PWLAFGRLRVVHTNGLIYGFTIAGIFACSFYMLEKLTRTPLAFPRLAKAQLWLFNLAI
                     ALAALSLFAGMNTSKEYAELEWPLDIVVVILWVMFAVNVMGTLVKRREKQMYVSLWFM
                     IATVVTVAVVYILNNLAIPVSLTKSYSAYAGVNDANVQWWFGHNAVASVFTFPILAMF
                     YYFLPKSTGLPIYSHRLSIIAFWSLVFGYLWTGAHHLMLTPVPEWIQTVALAFSMFLI
                     APSWASVINGFYTMNGNWEQMRSNYLVKFFILGITFYGLQTIQGPTQAIRALSGFLHY
                     TEYIPGHVHMGTMGWVTMVITASMYFMMTKISGREIHSVKLANVHFWLILVGQLLFTV
                     TLWIAGIVQGAMWKATNPDGSLAYTFLDSVAAMYPYWTVRLLGGLLYFAGVAVFAYNL
                     YMTSRLKARAV"
     gene            1768..>2233
                     /locus_tag="VK429_01275"
     CDS             1768..>2233
                     /locus_tag="VK429_01275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012502886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit II"
                     /protein_id="HLN90472.1"
                     /translation="MKIDSLYEKPVLFALAAVVVISVGTLVTTFIPLFLPSTQPVSSL
                     IKPYTAVETEGRDIYIREGCNNCHTQTVRPMRTEVARYGDYSEAEESAWDRPFLWGSR
                     RTGPDLARLGGKYPDAWHYRHMANPQAMFDKSNMPAYPWLGNAKLDTSFTAKK"
BASE COUNT          413 a          728 c          660 g          432 t
ORIGIN      
        1 cggggtgacc atggaccagg gcgaggagaa gacgacccag agcgatagaa gccccttcag
       61 gaagagtgcg agggagacga aggaccagac gcggccgagc cggccggtcg atagaaacac
      121 gacggactgc cacgcggcga cgaactggaa gatcgccgag atgcactgga ccgcaggaag
      181 caccatccgg cagttccact cccctggctt ctttcgagaa cgactcctgt tccacgtatc
      241 ggcggaatac gcccggaact tcaggagaat cctcgtgcca tcgggatcat atcaaatctt
      301 tcgggtacat gcttccctgt ggcgaacgcg tccggaaata tgtacactgt cgacaatatc
      361 gtccaacagg agattcggat ggcgaacggg gcacgaaacg actcgatcgt caggggattc
      421 gccctctctt cggtgttctg gctgctggtc gggttgctga tcgggctctg gctggccgcc
      481 gagatggtct accccgccct gaaccttgcg ccctggctcg cgttcgggcg cctgcgcgtt
      541 gtccacacca acgggctgat ctacgggttc accatcgccg ggatcttcgc ctgcagtttc
      601 tacatgctgg aaaaactgac aaggaccccg ctcgcctttc cgcgcctcgc gaaggcacaa
      661 ctctggctgt tcaacctcgc catcgccctc gcggccctct ccctgttcgc cgggatgaac
      721 acctccaagg agtatgcgga actggagtgg cccctcgaca tcgtggtggt gatcctgtgg
      781 gtgatgttcg ccgtgaacgt gatggggacg ctcgtcaagc ggcgggagaa gcagatgtac
      841 gtctccctct ggttcatgat cgcgaccgtc gtcacggtgg cggtcgtcta catcctcaac
      901 aacctcgcga taccggtcag cctcaccaag tcgtactcgg cgtatgctgg cgtgaacgac
      961 gccaacgtcc agtggtggtt cgggcacaac gccgtggcat ccgtcttcac cttcccgatc
     1021 ctcgcgatgt tctactactt ccttccgaag tccacggggc tgccgatcta cagccaccgc
     1081 ctctccatca tcgccttctg gtccctcgtc ttcggctacc tgtggaccgg ggcgcaccac
     1141 ctgatgctga ccccggtgcc cgagtggatc cagacggtcg ctctcgcgtt cagcatgttc
     1201 ctcatcgccc cctcctgggc gtcggtcatc aacggcttct acacgatgaa cgggaactgg
     1261 gaacagatga ggtcgaacta cctggtgaag ttcttcatcc tcgggatcac cttctacggt
     1321 cttcagacga tccagggacc gacccaggcg atccgggccc tctccggctt cctgcactac
     1381 accgaataca tccccggcca cgtccacatg gggacgatgg ggtgggtgac gatggtcatc
     1441 acggcatcca tgtatttcat gatgacgaag atctccggcc gggagatcca cagcgtcaag
     1501 ctggcgaacg tccatttctg gctgatcctc gtggggcagc tcctgttcac cgtgaccttg
     1561 tggatcgccg gcatcgtcca gggcgccatg tggaaggcca ccaaccccga cggctccctc
     1621 gcgtacacgt tcctcgactc cgtggcggcg atgtacccgt actggaccgt gaggctcctc
     1681 ggcggccttc tctacttcgc cggggtcgcg gtcttcgcct acaacctcta tatgacatcg
     1741 cggctgaaag cccgggcggt gtgaccgatg aagatcgaca gcctctatga aaaaccggtt
     1801 ctcttcgccc tcgcggcggt ggtcgtcatc tcggtgggga cgctggtgac gaccttcatc
     1861 cccctcttcc tgccgtcgac ccagccggtg agctccctga tcaagccgta cacggccgtc
     1921 gagacggaag ggagggacat ctacatccgg gaagggtgca acaattgcca cacccagacg
     1981 gtgcggccga tgcgcaccga ggtcgcccgg tacggcgact actccgaggc cgaggagtcg
     2041 gcctgggacc ggcctttcct ctggggttcg cggcgcacgg gtcccgacct cgcccggctg
     2101 gggggaaagt acccggacgc gtggcattac cgccacatgg cgaacccgca ggcgatgttc
     2161 gacaagtcga acatgcccgc gtacccgtgg ctcgggaacg cgaagctaga cacctccttc
     2221 acggccaaaa agg
//
LOCUS       DATGYW010000096         2546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_222059, whole genome shotgun sequence.
ACCESSION   DATGYW010000096 DATGYW010000000
VERSION     DATGYW010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222059"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1267)
                     /locus_tag="VK429_01280"
     CDS             complement(<1..1267)
                     /locus_tag="VK429_01280"
                     /inference="COORDINATES: protein motif:HMM:NF014398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0042279 - nitrite reductase (cytochrome,
                     ammonia-forming) activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HLN90473.1"
                     /translation="MKKGAWVGIVVLVGALSVYLMSGSAMADKSSQKKADGGIGTEGQ
                     IYGPMTVRAVPKAPKPADPAVREEKCFECHDEIQALKQGGKHGKVNCTSCHDGTADHL
                     KDSDKRPATRVDLETCGGCHPDQYASFATLNLKKIARTEKSLLTERAPNPFWDKLMMG
                     HGFTKEHANPRSHAFMLVDHLIVDRAYGGRFQSKDGWGYVSMPGPVKAWDVLVDRYPD
                     SKEHKAFLPESAAAANPTCLQCKTQDKVLQWKYLGDKDDRAKWNRGSNVVEYVKELNT
                     AMNCFMCHDPHAAKPRIVRDGLIQALTRPEKDTLWHKDPGATKIDVKEFRGGYRKIAL
                     LEKYDAKLQCGQCHVEYNCNPGFDPKTGEYSIKAPDQRTNHFPFKNVLQIYDHYNDLG
                     FRDFKHTLTGGLLWKAQHPEAETYWGSTHD"
     gene            complement(1440..1850)
                     /locus_tag="VK429_01285"
     CDS             complement(1440..1850)
                     /locus_tag="VK429_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018294387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90474.1"
                     /translation="MAVAAILFGVMTALTGGRALFGSLESRADFGNTVPFVLWFNFLA
                     GFIYIVTGAGLLLYRRWAVYASLFVAVSTILVFVAFGVHVISGGAYERRTIGALIIRS
                     LFWIAVTIVSIRARSFSGPGGRWFKSGHPDHLFK"
     gene            complement(1885..>2546)
                     /locus_tag="VK429_01290"
     CDS             complement(1885..>2546)
                     /locus_tag="VK429_01290"
                     /inference="COORDINATES: protein motif:HMM:NF017262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HLN90475.1"
                     /translation="LLTAVMWFGTILYVHLLLKPAYASRGLPRGELIVGWGSIVLIAV
                     TGTILTFYRVPSTDVLLHTRFGMLLMAKIGIFLVMTATAFIVTFAIGPRLKARHAKVD
                     PQKKDMSMEVLSSFTGKDGSPAYFAYQGMIYNASGSKLWRKGLHVGKHQAGFDLTDVL
                     KLAPHGEDRVFRLPVVGKLLATTEPERKPLHLKAFYFMTFLNLFLVLAVLLIIAVWRW
                     W"
BASE COUNT          497 a          795 c          750 g          504 t
ORIGIN      
        1 tgtcgtgcgt cgatccccag tacgtctccg cttccggatg ctgggccttc cacaacagcc
       61 cgccggtcaa ggtgtgcttg aagtcgcgga acccgaggtc gttgtaatgg tcgtagatct
      121 gaaggacgtt cttgaacggg aagtggttcg ttctctgatc cggcgccttg atcgagtatt
      181 cgccggtctt cgggtcgaag ccggggttgc agttgtactc cacgtggcac tggccgcact
      241 ggagcttcgc gtcgtacttc tccagcaggg cgatcttccg gtagcccccg cggaactcct
      301 tcacgtcgat cttcgtcgcc cccgggtcct tgtgccagag cgtgtccttc tccggacggg
      361 tcagcgcctg gatcaggccg tcccggacga tccggggctt cgccgcgtgc gggtcatggc
      421 acatgaagca attcatcgcc gtgttcagtt ccttcacgta ctcgacgacg ttcgaaccgc
      481 ggttccactt cgcccggtcg tccttgtccc ccaggtactt ccactggaga accttgtcct
      541 gcgtcttgca ctgcaggcac gtcgggttgg cggccgcggc gctctccggg aggaacgcct
      601 tgtgctcctt gctgtccgga taccggtcga ccagcacgtc ccacgccttc accggtccgg
      661 gcatggagac gtacccccac ccgtccttcg actggaaccg cccgccgtac gcccggtcga
      721 cgatcaggtg gtcgacgagc atgaaggcgt ggctgcgcgg gttggcgtgc tccttcgtga
      781 agccgtgccc catcatcagc ttgtcccaga acgggttcgg ggcgcgctcc gtgaggagcg
      841 acttctccgt gcgggcaatc tttttcaggt tcagggtggc gaaactggcg tactggtccg
      901 ggtggcagcc gccgcacgtc tcgaggtcga cgcgggtcgc cgggcgcttg tcgctgtcct
      961 tcaggtggtc cgccgtcccg tcgtggcagc tcgtgcagtt gaccttcccg tgcttcccgc
     1021 cctgcttcag cgcctggatc tcgtcgtggc actcgaagca cttctcctcg cgaaccgcgg
     1081 gatcggccgg cttcggcgcc ttcgggacgg cgcggaccgt catcgggccg tagatctggc
     1141 cttccgtacc gataccccca tccgcttttt tctgtgacga cttgtcggcc atcgcgctgc
     1201 cggacatcag gtacaccgac agggcgccca ccagaacgac gatcccgacc cacgctcctt
     1261 ttttcatacc tcgccctcct tccggggttc ttcgtaggca gattgtatac agtatacact
     1321 ttcgtcttga cgtggcatcc cgaaacagga accgggagac ctgacccagg tcaggaggac
     1381 tggcggagga ggttgcggat cgctacggca atgagactcc cgggaggggc ggcccgcaac
     1441 tacttgaaaa gatggtcggg atgaccggat ttgaaccaac gaccccctgg tcccgaaaag
     1501 gaccgggcac gtatcgagac aatcgtcact gcaatccaga agagcgatct gataatcagc
     1561 gcgccaatgg tccgcctctc gtacgcccca ccgctaatta cgtgtacgcc aaatgccaca
     1621 aagacaagga ttgtggaaac tgcaacgaac agtgaggcat agacggccca gcgcctgtac
     1681 agcagaagac ccgccccggt tacgatataa ataaatccgg cgagaaaatt gaaccagagc
     1741 acaaagggga ccgtattgcc gaaatcggca cgcgattcca aactgccaaa caatgctcga
     1801 ccaccagtca aagcggtcat aacaccgaac aggattgcag cgactgccat ccagttcact
     1861 atacgatttg cattcatgca gacatcacca ccaccgccac acggcgatga tcagcagcac
     1921 ggcgaggacc aggaaaagat tcaggaaggt catgaaatag aacgccttaa ggtgcagggg
     1981 tttcctttcc ggctcggtag tagccaggag tttccctacc acggggagtc gaaaaacccg
     2041 gtcctccccg tggggagcaa gtttcaggac gtccgtgaga tcgaatcccg cctggtgctt
     2101 ccccacgtgg agccccttcc gccatagctt gctgcccgag gcgttgtaga tcatcccctg
     2161 atatgcgaag taggcaggtg aaccgtcttt ccccgtaaac gacgaaagta cttccatgct
     2221 catgtctttc ttctgcggat cgaccttcgc atggcgggct ttcaggcggg gtccgatagc
     2281 gaacgtcacg atgaacgccg tggccgtcat gacgaggaag atgccaatct tggccatcag
     2341 cagcatcccg aagcgagtgt ggaggaggac gtctgtcgag ggaacccggt agaacgtgag
     2401 gatcgtccca gtgacggcga tcaggacgat ggaaccccac ccgacgatca gctccccgcg
     2461 gggcaaaccc cgggacgcat atgcgggctt gaggagaagg tgaacgtaca ggatggtgcc
     2521 gaaccacatc acagccgtca gcaggt
//
LOCUS       DATGYW010000097         1867 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_382664, whole genome shotgun sequence.
ACCESSION   DATGYW010000097 DATGYW010000000
VERSION     DATGYW010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382664"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..234)
                     /locus_tag="VK429_01295"
     CDS             complement(<1..234)
                     /locus_tag="VK429_01295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018619905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HLN90476.1"
                     /translation="MKALLCTEFGPLEKLTIQEIPKPSPGPGQVLLDVKASSLNFPDV
                     LMAQGLYQVKPPLPFSPGTEMAGVVVETGVDVQG"
     gene            359..1795
                     /locus_tag="VK429_01300"
     CDS             359..1795
                     /locus_tag="VK429_01300"
                     /inference="COORDINATES: protein motif:HMM:NF023222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HLN90477.1"
                     /translation="MGLKSFEKHRESLRDGREVYFEGERVMDVTTHPILGAGMAFAAI
                     DYRLAEEKEHRELAVCTDPRTGELYSRFYRIPETADDLLKRRELIAAGSRVNGGPPLI
                     KEIGTDALFALHIVSDHMDKRLGTFVLPRVRDYFGTCRSLDLSFAVAQTDVKGDRGKR
                     PSEQHNPDVYLRVVERRKDGIVVRGAKAHTTASPFADELIVLPTRAMAEADADYAVAF
                     AVPVATPGIKLIAGVSSHPGGNRFDYPVTTDLKMVDTVTVFDDVFVPWERVFLCGEWQ
                     YAGALANAFVEFHRFTAASYKLPMCELFIGSAQLIAEYNGVANVTHVRDKIMELIAWT
                     ETTRGLLVAAAMEHRVVSPGIAVPSVTLTNIAKHHFARNYHAMVQNLQDIAGGLLVTA
                     PFRKDWENEATRGYLDHYLGGVEGVSGVQRVRAMKLIRDIAASAFGGYQEILSIHAEG
                     SLAAQRITVLRDYDVKRCVDIVKSYLKD"
BASE COUNT          380 a          542 c          587 g          358 t
ORIGIN      
        1 tccctgtaca tctacaccgg tctcgaccac cacgcccgcc atttcggtgc cgggcgagaa
       61 agggagcggc ggcttcacct gatagaggcc ctgcgccatc aaaacatcgg ggaagttgag
      121 cgaactggcc ttgacatcga gcaggacctg tccgggaccg gggctcggtt tcgggatttc
      181 ctgaatcgta agtttttcaa gggggccgaa ttcggtgcac agcagggctt tcatgttttt
      241 ccctcctcca taagagcctc gaccatgccg tgcgcttctt cggaatcgaa atgccgccat
      301 ggttgatctc aagtataaag caacggaagg tcggccgaac tgcgaggagg tgaccgccat
      361 ggggttgaaa tcgtttgaaa agcaccggga aagccttcgc gacggcaggg aggtgtattt
      421 cgagggggaa cgggtcatgg atgtcacgac gcatccgata ttgggtgccg ggatggcctt
      481 cgcggcgatc gactaccgtc tggcggagga gaaggagcat cgggaattgg cggtatgcac
      541 agacccgagg accggcgagc tgtacagccg gttctatagg atccccgaaa ccgcagatga
      601 tcttctgaag cgccgtgaac tgattgcggc cggctcgcgc gtcaacgggg gaccgccact
      661 gatcaaggag atcgggacag acgccctctt cgccctgcac atcgtctcgg accacatgga
      721 caagcgcctt ggtacgttcg ttcttccaag ggtcagagac tatttcggaa catgccgctc
      781 cctggacctc agcttcgccg tggcgcagac ggacgtgaag ggagatcgag ggaagaggcc
      841 ctcagaacag cataatccgg acgtctacct ccgcgtggtg gaacgacgca aggacggcat
      901 cgtcgtccgg ggagcgaaag cgcacaccac ggcatccccg tttgcagacg aactgatcgt
      961 gctcccgacg cgtgctatgg ccgaagcgga tgcagactat gccgtcgcct tcgccgtacc
     1021 ggtggctacc cccgggataa aactcatcgc cggggtctca agccaccccg gaggcaaccg
     1081 cttcgactat cccgtcacca cggatctgaa gatggtggat accgtgacag tcttcgacga
     1141 cgtcttcgta ccgtgggaga gggtttttct ctgtggggag tggcagtacg cgggcgccct
     1201 tgccaatgcc ttcgtcgaat tccatcggtt caccgcggct tcctacaagc ttccgatgtg
     1261 cgagctgttc atcggctccg cccaattgat cgccgagtac aatggcgtgg cgaacgtcac
     1321 ccatgtccgt gacaagatta tggagttgat cgcttggacg gagaccaccc gcgggttact
     1381 cgtggccgcc gcgatggagc atcgggttgt gtcaccgggg atcgccgtgc ccagcgtcac
     1441 gctgacgaac atcgccaagc atcatttcgc ccgaaattac catgcaatgg tccagaatct
     1501 ccaggacatc gcgggaggac tcctggtcac ggctccgttc cgaaaggact gggagaacga
     1561 agccacgcgc ggttacctgg accattatct cggcggggtg gaaggcgtgt cgggggttca
     1621 gcgggtccgg gccatgaaac tgatccggga catcgcggca tcggcattcg gggggtacca
     1681 ggaaatcctg tcgatccacg cggagggatc gttggccgcc caacggatca cggttctccg
     1741 ggattacgac gtgaagcggt gcgtcgacat tgtgaaatcg tacctcaagg attgagtcgg
     1801 aaggccccct cttccggccg acgtcttgtg ggtcgaatcg gccccgacgg ctccgaacgc
     1861 cggaacc
//
LOCUS       DATGYW010000098         2025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_222249, whole genome shotgun sequence.
ACCESSION   DATGYW010000098 DATGYW010000000
VERSION     DATGYW010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222249"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            27..1754
                     /gene="aspS"
                     /locus_tag="VK429_01305"
     CDS             27..1754
                     /gene="aspS"
                     /locus_tag="VK429_01305"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HLN90478.1"
                     /translation="MGKEVVLCGWVHRRRDHGGLVFVDLRDREGLAQVVIDPVTSPEA
                     HAKADALRVEYVLSVRGVVRRRPTGTENPNLPTGEVEVSATALAILNESKPIPFSLED
                     DTDVAENVRLKYRYLDLRRPSIQAMFMKRAKLARSVREYFFENGFLEVETPVLTKSTP
                     EGARDYLVPSRVNPGMFYALPQSPQLFKQILMIAGYDRYAQIVKCFRDEDLRADRQPE
                     FTQIDVEMSFIDRDDIFAMMEGLMARVFRDVLGEEIRNPIPRMSYREAMDRFGVDKPD
                     TRFGLEITDHTALLSKTDFRVFAEVASRGGVIRGITAPGLGESSRSEIAALEEVAKIG
                     GASGLASFKVTEAGLTSSLGKFFRAEQLVSLREESGAKPGDLILLVADSFDVACSSLG
                     RLRLHLGEKLGMIDASLHHLLWVTDFPLLEWDKEEKRWGAMHHPFTAPVDEDLPLLST
                     DPGKVRAKAYDMVLNGSEIGGGSIRIHRKDVQSRMFELLNIGPEDARVKFGFLLEALE
                     FGAPPHGGIAFGLDRLAMLFSGAKSLRDVIAFPKTQKATCLMTEAPSAVDAKQLRELS
                     IRVTVPEKK"
     gene            1774..>2025
                     /locus_tag="VK429_01310"
     CDS             1774..>2025
                     /locus_tag="VK429_01310"
                     /inference="COORDINATES: protein motif:HMM:NF014666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HLN90479.1"
                     /translation="MLPGELFHPGSVAVVGASRNPEKVGYGVFANLVQAGFQGKIHGV
                     NPGGGELFGHPLCPSIEAIPGPVDLGIFVVPPNAVLEGIP"
BASE COUNT          332 a          650 c          703 g          340 t
ORIGIN      
        1 actgcggcca gctccggccg gaggatatcg gcaaggaggt cgtcctgtgc ggctgggtcc
       61 accggcgccg ggatcacggg gggctcgtgt tcgtggacct gcgcgatcgg gaggggctgg
      121 cgcaggtcgt gatcgatccc gtcacctctc cggaggcgca cgcgaaggcc gacgccctgc
      181 gggtggagta cgtcctttcg gtgcgcggcg tcgtccgccg ccgtcctacg ggtacggaaa
      241 acccgaacct cccgacggga gaggtggagg tgtcggcgac cgcgcttgcg atcctgaacg
      301 agtcgaagcc gatccccttc tccctcgagg acgacaccga cgtggccgaa aacgtccggc
      361 tcaagtaccg ctatctcgac ctccggcggc cgtcgatcca ggcgatgttc atgaaacgcg
      421 cgaagcttgc ccgctccgtc cgggagtact tcttcgagaa cggattcctc gaggtggaga
      481 cgcctgtgct gaccaagagc acccccgagg gggcgcggga ctacctggtg ccgtcccgcg
      541 tcaatccggg gatgttctac gcccttcccc agtccccgca actgttcaag cagatcctga
      601 tgatcgccgg atacgaccgg tacgcgcaga tcgtcaagtg ctttcgcgac gaggacctgc
      661 gcgccgaccg ccagcccgag ttcacgcaga tcgacgtcga gatgtcgttc atcgaccggg
      721 acgacatctt cgcgatgatg gaaggtctca tggcccgcgt cttccgcgac gttcttggcg
      781 aggagatccg gaaccccatc ccgcggatga gctaccggga ggcgatggac cggttcgggg
      841 tcgacaagcc ggacacccgg ttcgggctgg agatcacgga ccacacggcg ctcctgtcga
      901 agaccgactt ccgggtattc gccgaggtgg catcgcgcgg tggcgtgatc cgggggatca
      961 cggctcccgg cctgggcgaa tcgagccgct ccgagatcgc cgcgctcgaa gaggtggcca
     1021 aaatcggggg ggcctccggc ctcgcctcgt tcaaggtgac cgaggcgggg ctgacctcct
     1081 ccctggggaa gttcttccgg gcggagcagc tggtctccct gcgggaggag agtggcgcga
     1141 agccggggga cctgatcctc ctggtggccg attcgttcga cgtggcgtgc tcctccctcg
     1201 gacgtctccg cctccacctc ggggaaaagc tcgggatgat cgacgcctcc ctgcaccacc
     1261 tgctgtgggt gaccgacttc ccgctcctcg agtgggacaa ggaggagaag cggtgggggg
     1321 cgatgcacca cccgttcacc gcgccggtcg acgaggacct cccgctgctt tcgacggatc
     1381 cagggaaggt ccgcgccaag gcgtacgaca tggtgctgaa cggctcggag atcggggggg
     1441 ggagcatccg tatccaccgg aaggacgtgc agtcccggat gttcgagctg ctgaacatcg
     1501 gaccggagga tgcccgggtg aagttcgggt tcctcctgga ggcgctggaa ttcggcgcgc
     1561 cgccgcacgg ggggatcgcc ttcgggctgg accggctggc gatgctattc tcgggggcaa
     1621 aatcgcttcg cgacgtgatc gccttcccga agacccagaa ggcgacgtgc ctcatgacgg
     1681 aggctccgtc cgcggtcgac gcgaagcagc tgcgcgagct ttcgatccgg gtgacggtgc
     1741 cggaaaagaa gtagcccgca tcggagaggg gccatgctcc ctggcgaact gttccatccc
     1801 ggatcggtcg ccgtcgtcgg ggcttcccga aatccggaga aagtcgggta cggggtgttc
     1861 gccaacctcg tgcaggccgg tttccagggg aagatccacg gggtgaatcc cggcggcgga
     1921 gagcttttcg gccacccgct gtgcccgtcc atcgaagcga tccccgggcc cgtcgacctg
     1981 ggaatcttcg tcgtcccgcc gaacgccgtt ctcgaaggga tccca
//
LOCUS       DATGYW010000099         1588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_382850, whole genome shotgun sequence.
ACCESSION   DATGYW010000099 DATGYW010000000
VERSION     DATGYW010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_382850"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..545)
                     /locus_tag="VK429_01315"
     CDS             complement(<1..545)
                     /locus_tag="VK429_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002766081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLN90480.1"
                     /translation="MRYKLLGRTGLRVSELCLGTMTFGEEWGWGASKEESRAIFDAFA
                     DAGGNFVDTANLYTGGTSEKFVGDFLKGRRERFVLATKYTLNMAPDDPNGGGNHRKNL
                     VQSLDASLKRIGTDYIDLYWVHAWDGMTPLEETMRALDDVVRAGKVLYVGISDAPAWV
                     VSRANTLAELKDWSPFVALQI"
     gene            755..943
                     /locus_tag="VK429_01320"
     CDS             755..943
                     /locus_tag="VK429_01320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90481.1"
                     /translation="MEITLTGAEKFVLRETVEKALHDMLLEIAHTDNRRMREGLKERE
                     EILSTILAKLPVEERVAV"
     gene            1143..>1588
                     /locus_tag="VK429_01325"
     CDS             1143..>1588
                     /locus_tag="VK429_01325"
                     /inference="COORDINATES: protein motif:HMM:NF020036.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HLN90482.1"
                     /translation="MAHEGNLPPQWQCAAPPGAGGDGQVQTDPDGRQQQWLLLSLLEN
                     IPGIVYRGMPDWSLTFVGGEVERLTGYTSREMLGALTPWRGLIHPDDIEPVFESIRNA
                     VCRRERILRIECRIVRKNGEIRWVSDRRQMIYDDSGMLLCVDGLCM"
BASE COUNT          292 a          488 c          503 g          305 t
ORIGIN      
        1 tggatctgca gggcgacgaa gggactccag tctttcagtt cggcgagcgt attcgcccgc
       61 gacacgaccc aggcgggggc gtcggagatc ccgacgtaga ggacttttcc ggcccgcacc
      121 acgtcgtcca gggcccgcat cgtctcctcg agcggggtca tcccgtccca ggcgtggacc
      181 cagtagaggt cgatgtagtc ggtgccgatg cgcttcaggc tcgcgtcgag ggactgcacc
      241 aggttcttcc ggtggttccc tccgccgttc gggtcgtccg gggccatgtt cagggtgtat
      301 ttcgtggcga ggacgaaccg ttccctccgg cccttcagaa aatcgcctac gaacttttcg
      361 ctggtgccgc cggtgtacag gttcgcagtg tcgacgaagt tccccccggc atccgcgaac
      421 gcatcgaaaa tggcgcgact ctcctccttc gacgctcccc agccccactc ctcgccgaac
      481 gtcatcgtcc ccaggcacag ttcggagacc cgaaggcccg tccttcccag aagtttgtag
      541 cgcatcgccc gcctcctttt tctttcccgc ggaataccac taacctatat ggatgagcgc
      601 tgcgcgcaat ccgtcgcttc caacggcggt ttttcctcgg acaagggatc gggatagagg
      661 ggatccttcc gtcccggcgg gagtataatg tagatgcggg agcaggtatc ggtcggcaac
      721 ggaacgcctc tgagggatcg aaggaggtgg gagtatggaa atcaccctga ccggcgccga
      781 gaagttcgtc ctgcgggaga ccgtggagaa ggcgctccac gatatgttgt tggagatcgc
      841 ccacacggac aaccggagaa tgcgcgaagg cctgaaggag cgcgaggaga ttctgagcac
      901 gatccttgcg aagcttcctg tcgaggaacg cgtggcggta tgagcacccc cccgtcgtaa
      961 cggggaagga atgaccggga aaggccgggg ccggtccggt cggtctctca ggacctccgg
     1021 agcggacgcg tggttctgtt cattttcagg ctatttcccg gaatccatgt gaagtttcag
     1081 ccccttcctg ccgaaacatc attccgaaac atcatttgac aaatgcatcc ggaggggccg
     1141 cattggcgca cgaggggaat cttccgccgc aatggcaatg tgctgcaccg ccgggtgcgg
     1201 gcggggacgg tcaggtccag accgatcccg acggtcgtca acagcaatgg ctcctcctct
     1261 cccttctcga gaacatcccg ggaatcgtct accgggggat gccggactgg agcctcacct
     1321 tcgttggggg cgaggtggag cggctcacgg gatacacctc ccgggagatg ctgggcgcgt
     1381 tgactccatg gcgtggactg atccaccccg acgacatcga accggtcttc gagtcgatcc
     1441 ggaatgccgt ctgccgccgg gagcggatcc tgcgcatcga atgccggatc gtgcgcaaga
     1501 atggcgaaat ccgttgggtc tccgaccggc gccagatgat ctacgacgac agcgggatgc
     1561 ttctctgcgt cgacggcctc tgcatgga
//
LOCUS       DATGYW010000100         2995 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_437558, whole genome shotgun sequence.
ACCESSION   DATGYW010000100 DATGYW010000000
VERSION     DATGYW010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_437558"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /gene="rplJ"
                     /locus_tag="VK429_01330"
     CDS             <1..537
                     /gene="rplJ"
                     /locus_tag="VK429_01330"
                     /inference="COORDINATES: protein motif:HMM:NF000955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HLN90483.1"
                     /translation="AVNKIGKAETVEALKAAIAAQRGAVVAEYKGLKVLEITALRKKL
                     RAIDAEVRVVKNTLIRRAAEGTPFGALSAHFTGPTAVAFSHGDPVAMAKVMKEFAAAT
                     PKVTLRAGFVEGRVLSAKDVETLASVPSREVLLSRLVGGLASPITRLAMALSGPPRKL
                     VYVLESIRKQKPAEAVAG"
     gene            593..961
                     /gene="rplL"
                     /locus_tag="VK429_01335"
     CDS             593..961
                     /gene="rplL"
                     /locus_tag="VK429_01335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015310886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HLN90484.1"
                     /translation="MNKDEFIAMVEGMTVLELHEIVKALEDRFGVTAAAPAVAAAAPG
                     AAAPVAEEKTEFDVILTGFGANKIQVIKVVRELTGLGLKEAKDLVEGVPKPVKEAIAK
                     KDAEGMKKKIEDVGGTADIK"
     gene            1043..>2995
                     /locus_tag="VK429_01340"
     CDS             1043..>2995
                     /locus_tag="VK429_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HLN90485.1"
                     /translation="MAYLDYRNRIKRVDFSKNEKVQEIPNLIQVQQESYAEFLQANVP
                     PEKRKDVGLQTVFKGIFPITDYNGRASLEFLSYAIGDLKWSEEECRERGVTYAAPIKV
                     TVQLVIFDVDEKTGARTIRDVKEQEVFFGEIPLMSERATFIINGTERVIVSQLHRSPG
                     VFFEHDKGRSHASGKVLFSARIIPYRGSWLDFEFDHKDALYIKIDRKRKFPIAVLLRA
                     FGRTTEELLRIFYDAEEVTLQGEKYAKDFRPELMVGLKMPVEVRHPSKPGEIAFKKGV
                     KISKKRVERYAREGVTFGRILLPSDDLIGKVVVSDVADPATGEVVVECGQQITPEILG
                     KLWEKNVERLTIFTIENSDRAVWEGLVSDKIKTRDEALKEIYKKMRPGDPPTKDAAKT
                     LFENMFFNPERYSLSRVGRLKLDHKLGITESDLEKTVLTQEDILRVIRYLIGLKNGVG
                     EADDIDNLGNRRVRTVGELIENQFRMGLVRVERAIREKMGLQDIETLMPHDIINAKPV
                     SAVIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYG
                     RICPIETPEGPNIGLIASLSTFARINEFGFIETPYRVVRESAVTKEIVFLSAMEEERH
                     VIAQANAKIDAKGKFVQDVVIARQGGE"
BASE COUNT          607 a          899 c         1003 g          486 t
ORIGIN      
        1 gcggtgaata aaatcggaaa ggcagaaacg gtcgaggcgt tgaaggccgc catcgcggcg
       61 cagcgcgggg ccgtggtcgc ggagtacaag gggctgaagg ttttggagat cacggccctc
      121 cggaagaagc ttcgcgcgat cgacgccgag gtcagggtgg tgaagaacac cttgatccgg
      181 cgggccgcgg aggggacgcc gttcggggcg ctctccgcgc atttcacggg gccgacggcg
      241 gttgcgtttt cgcatggcga ccctgtcgcg atggcgaagg tgatgaagga gttcgcggcg
      301 gccactccaa aggtgacgct gcgcgcaggg ttcgtcgagg gcagggtgct ctccgcgaag
      361 gacgtcgaga ccctggcgtc cgttccgtcc cgcgaggtcc tgctctcgcg gctggtcggc
      421 gggctggctt cgccgatcac ccgcctggcc atggcgctct cggggccgcc tcgcaaactg
      481 gtgtacgtcc tcgagtccat ccgcaaacag aagcccgcgg aagcggtcgc aggctgaacc
      541 cgaacgaaca aattcacaat acctttaggg aggatcgaac gaaatggctt ccatgaacaa
      601 ggatgaattc atcgcaatgg tcgaggggat gacggttctc gagcttcacg agatcgtgaa
      661 ggcgctcgag gaccgtttcg gcgttacggc ggcggctccc gcggtggccg cggcggctcc
      721 cggtgcggcg gcccccgtcg cggaggagaa gacggagttc gacgtcatcc tcaccgggtt
      781 cggcgccaac aagatccagg tcatcaaggt ggtccgcgag ctcaccggcc tgggcctcaa
      841 ggaggccaag gacctggtcg agggcgttcc caagccggtc aaggaagcga tcgccaagaa
      901 ggacgccgag gggatgaaga agaagatcga ggatgtcggc gggaccgcgg atataaagta
      961 gccgctctct tcggcgtcgg caaccgcggc gggggacgac cgtcccccgt cgcattcacg
     1021 gttttacccc cggggtgaca cgatggctta tctggattac aggaaccgga tcaagcgggt
     1081 ggacttctcg aagaacgaga aggtccagga gattccgaac ctcatacagg ttcagcagga
     1141 gtcgtacgcg gagttcctgc aggcgaacgt tccgcccgag aagcgcaagg acgtggggct
     1201 ccagaccgtc ttcaagggaa tctttcccat caccgactac aatgggcgcg cctccctcga
     1261 gttcctctcc tacgcgatcg gcgatctgaa gtggtcggaa gaggagtgcc gcgagcgcgg
     1321 ggtgacgtat gccgccccca tcaaggtgac ggtccagctg gtcatcttcg atgtggacga
     1381 gaagaccggg gccaggacca tccgggacgt caaggagcag gaggtcttct tcggagagat
     1441 ccccctcatg tcggagcggg ccacgttcat catcaacggc accgagcggg ttatcgtcag
     1501 ccagctgcac cggtctcccg gcgtcttctt cgagcacgac aagggccgct cccacgcatc
     1561 cgggaaagtg ctcttcagtg cgcggatcat cccgtatcgc ggttcgtggc tcgatttcga
     1621 gttcgaccac aaggacgcgc tctacatcaa gatcgaccgg aagcggaagt tccccatcgc
     1681 cgttctgctg cgggcgttcg ggcgaaccac cgaggagctc ctgcggatct tctacgacgc
     1741 ggaagaggtc accctccagg gggaaaagta cgcaaaggat ttccggccgg agctgatggt
     1801 ggggctgaag atgcccgtgg aggtccgtca cccctccaag ccgggtgaga tcgccttcaa
     1861 gaagggcgtg aagatcagca agaagcgcgt cgaacggtac gcccgcgagg gtgtcacctt
     1921 cggccggatc ctgctgccgt cggacgatct catcggcaag gtggtcgtct ccgacgtcgc
     1981 cgaccccgcg accggggagg tcgtcgtcga gtgcggccag cagatcacac ccgaaatcct
     2041 cgggaaactg tgggagaaga atgtcgaacg gctcaccatc ttcacgatcg agaactccga
     2101 ccgcgccgtc tgggagggtc tggtctccga caagatcaag acccgcgacg aggccctgaa
     2161 ggagatctac aagaagatgc gcccgggcga tcccccgacg aaggacgccg ccaagacgct
     2221 cttcgaaaac atgttcttca atcccgagag gtacagcctg tcgcgggtcg gccgcctgaa
     2281 gctcgaccac aaactcggga tcacggaaag cgacctcgag aagacggtcc tgacccagga
     2341 ggatatcctc cgggtcatcc gctacctgat cggtctgaag aacggcgtcg gggaggccga
     2401 cgacatcgac aacctcggaa accgccgtgt ccgcaccgtg ggcgaattga tcgagaacca
     2461 gttccggatg ggcctggtcc gcgtcgagcg cgccatccgt gaaaagatgg gtctgcagga
     2521 catcgagacg ctgatgcccc acgacatcat caacgcgaag ccggtgtccg ccgtcatcaa
     2581 ggagttcttc ggatcgtccc agctgtcgca gttcatggac cagacgaatc cgctctccga
     2641 ggtgacgcac aagcggcgcg tctccgccct cgggcccggg ggcttgaccc gggagcgcgc
     2701 ggggttcgag gtgcgcgacg tccacccgac gcactacggg cgcatctgcc cgatcgagac
     2761 gccggaagga ccgaacatcg ggctgatcgc ctcgctgtcg accttcgcga ggatcaatga
     2821 gttcggattc atcgaaacac cgtaccgggt cgtcagggaa tcggccgtga cgaaggagat
     2881 cgtcttcctc tccgcgatgg aggaggagcg gcacgtcatc gcgcaggcca acgcgaagat
     2941 cgacgcgaag gggaagttcg tacaggacgt ggtgatcgcg cgccagggcg gtgag
//
LOCUS       DATGYW010000101         1730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_4010, whole genome shotgun sequence.
ACCESSION   DATGYW010000101 DATGYW010000000
VERSION     DATGYW010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4010"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..457)
                     /locus_tag="VK429_01345"
     CDS             complement(<1..457)
                     /locus_tag="VK429_01345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HLN90486.1"
                     /translation="MTELSKERLERYLSTLFHAPVAVTALVSLRESKASGAAKEYGYG
                     HPVKVEFTVGGSLRAAVLETTSPGPFGHEHMADRARMMLWDHGAYNALPNHVRSLDVG
                     AFDREGNLLSVANAEEFFLLVEHVEGAGYILDLARLQEGGPLRDLDLSRA"
     gene            complement(642..1409)
                     /locus_tag="VK429_01350"
     CDS             complement(642..1409)
                     /locus_tag="VK429_01350"
                     /EC_number="3.1.4.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011700867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004114 - 3',5'-cyclic-nucleotide
                     phosphodiesterase activity [Evidence IEA];
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-nucleotide phosphodiesterase"
                     /protein_id="HLN90487.1"
                     /translation="MRIKVLGAAGSEVPGHNCPAFLIDGKILLDAGTIALALNISEEH
                     SLGWILLTHAHLDHIKGIPFLLDNLVTRNTGNTITVLGGKDVLDDLRKNIFNDRIWPD
                     FSRIPTRGHPVLRYRNIGTTRPFLIDGYRITMEKVHHTVPAYGYIVEKPGKKTIAYTG
                     DTGPTDLFWEKMAAHDVKYLITETSFPNRLEKLALTTGHLSPSLVEGEIAKMSRLPEK
                     IFIMHLKPQFRQEIETEIRALGHDFIEFLKDGEVILA"
     gene            complement(1513..>1730)
                     /locus_tag="VK429_01355"
     CDS             complement(1513..>1730)
                     /locus_tag="VK429_01355"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HLN90488.1"
                     /translation="QGEFFGEMALFGKGVRSATVRPLGEVRVLSVDKRLFLRKIHEDP
                     ALAFRIMQKMSRRILELDKELANLRTE"
BASE COUNT          294 a          540 c          539 g          357 t
ORIGIN      
        1 ccgcccgcga gagatccagg tcgcgaagcg gacccccctc ctggagacgc gcgaggtcca
       61 ggatgtagcc cgccccttcg acgtgctcga ccaggaggaa gaactcctcg gcgttcgcga
      121 cggagaggag attcccttcg cggtcgaacg cgccgacgtc gagggagcgg acatggttcg
      181 gaagcgcatt gtacgcgcca tggtcccaca gcatcatcct ggcgcgatcc gccatatgct
      241 cgtggccgaa gggaccgggg ctcgtcgtct cgagcacggc ggcgcgcagc gaaccgccga
      301 cggtgaactc caccttcacc gggtggccgt acccgtactc cttggcggcg ccggacgcct
      361 tcgattcacg aagcgacacc agggcggtga cggccaccgg cgcatggaac aacgtgctca
      421 ggtaccgctc caggcgttcc ttcgagagtt ccgtcatcgg cgcgcctcct gcaaatccgg
      481 tgaagacctc cccagtcttt atccgcggac aggaatattc tcccacgttc cgccaccgaa
      541 ccgttacgct ctttcaactc cagaaattga tgaggttttt cggaatctcc tgatggtaag
      601 tccgccgggg agggcggtcc gaagttcttc ccgaattctt ttcaggccag gatcacttcc
      661 ccgtccttca gaaactcgat gaagtcgtgc cccagcgccc ggatctccgt ctcgatctcc
      721 tgccggaatt gcggcttgag gtgcatgatg aagatcttct ccggcaggcg cgacatcttc
      781 gcgatctccc cttcgacaag ggagggggag aggtgaccgg tcgtcagcgc aagtttttcc
      841 aggcggttgg ggaaggaggt ctccgtgatg aggtacttaa cgtcgtgggc ggccatcttc
      901 tcccagaaaa ggtcggtcgg ccccgtgtcc cccgtgtagg cgatcgtctt cttccccggt
      961 ttctcgacga tatatccgta tgccggcacg gtgtgatgga ctttctccat cgtgatccgg
     1021 tatccgtcga tcagaaacgg cctcgtcgtg ccgatgttcc tgtaccgtaa caccgggtgt
     1081 ccgcgcgtcg ggatccggga gaagtcgggc catatcctgt cgttgaagat gttcttcctc
     1141 aggtcgtcca ggacgtcctt cccgccgagg acggtgatgg tgttcccggt gttccgggtc
     1201 accaggttgt cgagcaggaa cgggatcccc ttgatgtggt cgaggtgggc gtgggtgagg
     1261 aggatccacc ccaggctgtg ctcctcgctg atgttcaggg ccagggcgat cgtccccgcg
     1321 tccaggagga tcttcccgtc gatcaggaac gccgggcagt tgtgcccggg gacctcggag
     1381 ccggcggcgc ccaacacctt gattctcaac ctcgatgcct ccctgtacga tgcattgctc
     1441 gggtccgatg tacggttatg gcgggtggtg aaatcggcag aatccgcacg gtaccgtcgg
     1501 gtccctcgtg gatcactcgg ttcgcaggtt cgccagttcc ttgtcgagtt ccaggatccg
     1561 tcgcgacatc ttctgcatga tgcggaaagc gagcgccggg tcttcgtgaa ttttccgaag
     1621 gaacagccgc ttgtcgacgg agaggacccg gacttccccc agcgggcgga cggttgcgga
     1681 gcggactccc ttcccgaaga gggccatctc cccgaagaac tcgccttgtc
//
LOCUS       DATGYW010000102         1781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_222604, whole genome shotgun sequence.
ACCESSION   DATGYW010000102 DATGYW010000000
VERSION     DATGYW010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222604"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..137)
                     /locus_tag="VK429_01360"
     CDS             complement(<1..137)
                     /locus_tag="VK429_01360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014960554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLN90489.1"
                     /translation="MKYLVTGGAGFIGSNLTRALLASGQNVRVLDNFLTGKRENLAGL
                     A"
     gene            complement(158..1474)
                     /locus_tag="VK429_01365"
     CDS             complement(158..1474)
                     /locus_tag="VK429_01365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020718814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HLN90490.1"
                     /translation="MAGTRSEKGLLSRIKEKNFTAAIVGMGYVGLPLAMEYADAGIPV
                     IGIDIDGSKVRALRSGKSYIGDVPSEAVKSAIDAGLFTPTTDYSAVGMADTVNICVPT
                     PLRKTKDPDLSYIVGAMEHLSEYLHKDMLIVLESTTYPGTTQEVLGPMVEKKGFKVGK
                     DIFLAFSPERVDPGNPKFTTKNIPKVVGGVTPACTKVAVALYSSVLENVHPVSTAAVA
                     EMVKLLENTFRSVNIALVNEIALMSNRMGIDVWEVIDAAGTKPFGFMPFYPGPGIGGH
                     CIPLDPFYLSWKAKQFGFESRFIELAGVVNGQMPHYTVEKVAEALNRSRKAVNGAKVL
                     VLGVAYKKDISDVRESPALDILQLLAKKGAHLSYCDPYVAEVREAGMALDASPFSAAT
                     LRKADCVVIVTNHAAFDYKMVAREAKMIVDTRNALKGHNGRKIVKL"
     gene            complement(1559..>1781)
                     /locus_tag="VK429_01370"
     CDS             complement(1559..>1781)
                     /locus_tag="VK429_01370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012978299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HLN90491.1"
                     /translation="GQTGKIVAPELYIALGISGAIQHLAGMKDSKVIVAINKDEEAPI
                     FQVADYGLVADLFKAVPEMIAELKKLKSA"
BASE COUNT          276 a          657 c          502 g          346 t
ORIGIN      
        1 tccgccagcc cggcgaggtt ttccctcttc ccggtgagga agttgtcgag gacccgcacg
       61 ttctgcccgg acgccagcag cgcccgcgtc aggttcgacc cgataaaccc cgccccgccc
      121 gtcaccagat acttcatccc gcccgcctcc cccgcggtca gagcttgacg atcttgcgtc
      181 cgttgtgacc cttcagcgcg ttgcgggtgt cgacgatcat cttcgcctcg cgggcgacca
      241 ttttatagtc gaacgcggca tggttcgtca cgatcaccac gcagtcggcc ttccggagcg
      301 tcgcggcgga aaacggcgat gcgtcgagcg ccatccccgc ctcccgcacc tcggccacgt
      361 acgggtcgca gtacgacagg tgcgccccct ttttcgccag gagctgcagg atgtcgaggg
      421 ccggcgactc gcgcacgtcg ctgatgtcct tcttgtacgc cacgcccagc accagcacct
      481 tcgccccgtt gaccgccttc cggctccggt tgagcgcctc ggccaccttt tccacggtgt
      541 agtgcggcat ctgcccgttc accacgcccg ccagctcgat gaagcgcgac tcgaacccga
      601 actgcttcgc cttccacgac aggtagaacg ggtccagcgg gatgcagtgt ccgccgatcc
      661 ccggcccggg gtagaagggc atgaagccga acggtttcgt cccggccgcg tcgatcactt
      721 cccacacgtc gatccccatc cggttcgaca tgagcgcgat ctcgttcacc agcgcgatgt
      781 tcaccgaccg gaacgtgttc tcgagcagct tcaccatctc ggccaccgcc gcggtcgaca
      841 ccgggtggac gttttcgaga acgctgctgt agagcgccac cgccaccttc gtgcacgcgg
      901 gcgtcacgcc gcccaccact ttcgggatgt tcttcgtcgt gaacttcggg tttccgggat
      961 cgacccgctc gggcgagaag gcgaggaaga tatcctttcc caccttgaac cccttcttct
     1021 ccaccatcgg gccgaggact tcctgcgtcg ttcccgggta cgtggtgctc tcgaggacga
     1081 tcagcatgtc cttgtggaga tactccgaca ggtgctccat cgcgccgacg atgtaggaga
     1141 ggtccggatc cttcgtcttg cgcagcggcg tgggaacgca gatgttgacc gtgtcggcca
     1201 ttccgaccgc cgagtagtcg gtggtcggcg tgaacagccc cgcgtcgatc gcgcttttca
     1261 ccgcctcgga cgggacgtcc ccgatgtacg acttcccgga ccgcagcgcg cgaaccttgg
     1321 acccgtcgat gtcgatcccg ataaccggaa tccccgcgtc ggcgtactcc atcgccagcg
     1381 gcagcccgac ataccccatc cccacgatcg cggcggtgaa gttcttctcc ttgatgcggg
     1441 acagcagacc cttctcgctc cgtgtgccag ccatgctccc tgccctctcc ccctcgagcc
     1501 cgccgtgtcc cggccgggcg tcacctcata cctttatcgg gcccgggccg gaaaaagatc
     1561 aggccgattt cagcttcttc agctccgcga tcatctccgg caccgccttg aacaggtccg
     1621 ccaccagccc gtaatccgcc acctggaaga tgggggcctc ctcgtccttg ttgatcgcca
     1681 cgatgacctt gctgtccttc atccccgcca ggtgctggat cgccccgctg atccccagcg
     1741 cgatgtagag ctccggcgca acgatcttgc cggtctgccc c
//
LOCUS       DATGYW010000103         5614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_329854, whole genome shotgun sequence.
ACCESSION   DATGYW010000103 DATGYW010000000
VERSION     DATGYW010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 5614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5614
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329854"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..293
                     /locus_tag="VK429_01375"
     CDS             <1..293
                     /locus_tag="VK429_01375"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009788273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HLN90492.1"
                     /translation="SESKITNPTHFNLPAAAICLVLFGVLSYAAVSTPYAVKKGVYLP
                     TTADIGELLMTRYLLPFEVVSVLLLAALIGAALLSRPDRTAPEKGEMEEGTR"
     gene            290..592
                     /gene="nuoK"
                     /locus_tag="VK429_01380"
     CDS             290..592
                     /gene="nuoK"
                     /locus_tag="VK429_01380"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009581082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HLN90493.1"
                     /translation="MTLDKLLVIAAALFCCGLYTVMTRRNAVAVLMGVELILNATNIN
                     FVAFSFFLNRVMGGQIFAVFVIVLAAAEAAVALAIFLRMFSTTGTVEVDSADQLKG"
     gene            596..2734
                     /gene="nuoL"
                     /locus_tag="VK429_01385"
     CDS             596..2734
                     /gene="nuoL"
                     /locus_tag="VK429_01385"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014857031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HLN90494.1"
                     /translation="MIRYAYIIPFLPLLSFFINIAVGRRLPRKGDWLCLGTIAIGLAM
                     SIGIFYEVFRAYDPNFRYHVVYPWLTVGDRALFNAGILIDNVTAVMLLVVTIVSTLVH
                     LFSIGYMHGDPRYSRYFAYLSIFSFSMLGLVLAESFLFIYIFWELVGLSSYLLIGFWF
                     EKKSASDAGKKAFIVNRVGDFGFLIGILIIYATCGVLGYDQVFLAIGEGKLSGTLLTL
                     AGIGVFCGAIGKSAQFPLHVWLPDAMEGPTPVSALIHAATMVAAGVYLVGRVYPMFTP
                     DAFLFIACFGLITLFLTASIALAQNDIKKVLAYSTCSQLGYMIMGLGVGGYTAGLAHL
                     TTHAAFKACLFLGSGSVIHAVHSQDIQEMGGLRKKMPITFVTFLIATLAISGVPGFSG
                     FYSKDMILGAALEFGMKSTNPLHMIFFIGALFTAGLTAFYMFRLVILTFFGAPKDHHK
                     YDHAHESPPNMWVPLVILAGLSFSFWYSGWFGTLVQKPKSVANLAGISAPATVATMEH
                     AAVMAPTPEVGSAAPHAAPPAVHGESQEGASHGETPARAGHGEDAAHDAHLAHKAHSI
                     AMYSSVAVGTLGIFLAFVVYSFGWINPDRVMNALKPLHTFLQNKWYFDELYDATAVNG
                     SKALSRGLAWFDMNVVDGLVNLSAQLGVFVSFLVGKFDDYVVDGAVNGLASATTGSGS
                     ILRRLQTGKLYHYVFVLAGGALIIFLIKAF"
     gene            2753..4282
                     /locus_tag="VK429_01390"
     CDS             2753..4282
                     /locus_tag="VK429_01390"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011744845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HLN90495.1"
                     /translation="MGFIDSHILSFMTFLPLLGAAVILCVPKGKDETIKWIAALASFL
                     PLLLAVRLWFTYDRSLAGVNVASQFQFVEHYSWIPSINVEYFVGADGISMPMLLLTAL
                     LSFLAVIGSFGIDKKIRGYMALFLLLETGMMGTFIALDFFLFYVFWEVMLLPMYFLIG
                     VWGGPRKEYAAIKFFLYTLAGSILMLIVLLALYFNTTNPETGAHTFNLLHYMSQNTHN
                     AWLKGFDVRILLFLGLFIGFAIKVPLFPFHTWLPDAHVEAPTAISVILAGVLLKMGTY
                     GLMRISFPVFPDVTVYFALPMAILGVINIIYGALCAMAQSDLKKLVAYSSVSHMGFCL
                     LGMAALTPLGMVGASMQMFSHGMITAMLFFLVGVVYDRAHHRQIDGFGGLGAVVPVYT
                     AFIGFAFFASLGLPGMSGFIAEQMVFLGTFGVFRTLVIIAALGIIFVAAFHLWALQRV
                     FLGPLNPKYATLAEINGREIFCLAPLAVLIMIVGVWPMPVLDLMNASLVRLVDLVKVV
                     I"
     gene            4284..>5614
                     /locus_tag="VK429_01395"
     CDS             4284..>5614
                     /locus_tag="VK429_01395"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HLN90496.1"
                     /translation="MFLGNLASVGYFLPEFAVTATILLLIVLHVVTKSPKSTASGFLS
                     LIGVGAAILFAGVVPAGAGRSIFEGMVAHDGFAVFFKVLTALATLVVIFMSMDSRDLA
                     GRSQAEYYIFLLSTLLGMFLLSSATDIVMLYLALELVSIPSYLLAGYLKGQEHSTEAA
                     MKYVVYGATASGVMIYGFSLLFGLTGSTQIAEIGRSLAAGKATLPMLLAAVMVAVGFG
                     YKIAAVPFHMWSPDVYEGAPTPATAFFSVGPKAAGFAVLVRFYFTVFAASEPGTGLWR
                     LTSAVDWPFLFAALSALTMTVGNLVAVKQSNVKRLLAYSSIAHAGYMLMGFVLLSSAG
                     IQAILFYLVVYLFMNLGAFYVVVLVSNATRGEDISDFTGLGSRAPFAAVALSIFLFSL
                     TGIPPFSGFIGKVYLFAEVIHRGVYWLAVVAALNSVVSLYYYARIVRAMFL"
BASE COUNT          805 a         1906 c         1718 g         1185 t
ORIGIN      
        1 tctccgaatc gaagatcacc aaccccaccc acttcaacct tcccgccgcg gcgatctgcc
       61 tggtcctgtt cggcgtgctc tcgtacgccg cggtgtcgac gccctacgcc gtgaagaagg
      121 gggtctatct ccccaccacc gcggacatcg gcgaactgct gatgacccgc tacctgctcc
      181 cattcgaggt cgtatcggtg ctgctgctcg cggcgctcat cggcgcagcg ctcctgtccc
      241 ggccggaccg gacggctccg gagaagggcg agatggagga gggaacgcga tgacgctcga
      301 caagctcctc gtcatcgccg ccgcgctctt ctgctgcggc ctctacaccg tgatgacccg
      361 ccgcaacgcc gtggcggtgc tgatgggggt cgagctgatc ctgaacgcga cgaacatcaa
      421 tttcgtggcg ttttccttct ttctcaaccg ggtgatgggc gggcagatct tcgccgtctt
      481 cgtcatcgtc ctcgcggcgg ccgaggcggc ggtggcgctt gccattttcc tgcggatgtt
      541 ctcgaccacg ggaaccgtgg aagtcgactc cgcggaccag ctgaaggggt agccggtgat
      601 ccgatacgcc tacatcatcc cgttcctccc gctgctgtcc ttcttcatca acatcgccgt
      661 cgggagacgg ctgccgcgca agggggactg gctctgcctg gggaccatcg ccatcggact
      721 cgcgatgtcg atcgggatct tctacgaagt cttccgggcg tacgacccga acttccggta
      781 ccacgtcgtc tacccctggc tcaccgtagg ggaccgcgcg ctgttcaacg cgggaatcct
      841 catcgacaac gtcaccgcgg tcatgctcct ggtggtcacc atcgtgtcga cgctggtgca
      901 cctgttctcc atcgggtaca tgcacggcga cccccggtac agccggtact tcgcctacct
      961 gtcgatcttc tccttctcga tgctggggct ggtcctcgcc gaaagcttcc tgttcatcta
     1021 catcttctgg gaactggtgg ggctttcctc ctacctcctg atcggcttct ggttcgagaa
     1081 gaagtcggcg tccgacgcgg ggaagaaggc gttcatcgtc aaccgggtgg gcgacttcgg
     1141 gttcctcatc gggatcctga tcatctacgc cacctgcggc gtgctggggt acgaccaggt
     1201 gttcctggcg atcggggaag ggaagctctc cgggacgctg ctgaccctgg cggggatcgg
     1261 agtcttctgc ggcgccatcg gcaagtccgc gcagttcccg ctgcacgtct ggctccccga
     1321 cgcgatggaa ggccccacgc cggtgtccgc gttgatccac gcggccacca tggtcgcagc
     1381 gggcgtctac ctcgtggggc gggtctaccc gatgttcacc cccgacgcgt tcctgttcat
     1441 cgcctgcttc ggcctgatca ccctgttcct caccgcctcg atcgccctgg cccagaacga
     1501 catcaagaag gtgctggcgt actcgacctg ttcccagctc ggctacatga tcatggggct
     1561 cggggtcggg ggctacacgg cggggctcgc gcaccttacc acccacgcgg cgttcaaggc
     1621 gtgcctcttc ctcggatcgg gctccgtgat ccacgccgtc cacagccagg acatccagga
     1681 gatgggcggc ctgcggaaga agatgccgat cacgttcgtt accttcctca tcgccaccct
     1741 tgcgatctct ggagtccccg gcttctccgg cttctactcc aaggacatga tcctcggagc
     1801 ggcgcttgaa ttcggcatga agagcacgaa cccgctgcac atgatctttt tcatcggcgc
     1861 cctgttcacc gccgggctga ccgccttcta catgttccgc ctggtgatcc tcaccttctt
     1921 cggcgccccg aaggaccacc acaagtacga ccacgcccac gagtcgcccc cgaacatgtg
     1981 ggtccccctc gtgatcctgg cggggctctc cttctccttc tggtactcgg ggtggttcgg
     2041 gacgctggtc cagaaaccga agtcggtcgc caacctggcc gggatttcgg ctccggccac
     2101 ggtcgccacg atggagcacg ccgccgtcat ggcgcccacg ccggaagtcg ggtccgcggc
     2161 gccccatgcg gctcctcccg ccgttcatgg ggagtcgcaa gagggggcct cccacgggga
     2221 aacgcccgcc cgggccgggc acggcgagga cgctgcgcac gacgcccacc tcgcgcacaa
     2281 ggcgcactcg attgccatgt actcctcggt ggcggtgggg accctcggga tcttcctcgc
     2341 ctttgttgtg tactccttcg ggtggatcaa cccggaccgc gtcatgaatg cgttgaaacc
     2401 gctccacacc ttcctgcaga acaagtggta cttcgacgaa ctgtacgatg cgacggcggt
     2461 caacggctcc aaggcgctct ccaggggcct ggcctggttc gacatgaacg tggtggacgg
     2521 cctggtgaac ctgtcggcgc agctcggggt cttcgtctcg ttcctcgtcg ggaagttcga
     2581 cgattacgtc gtcgacgggg ccgtcaacgg cctggcgagc gcgacgaccg gcagcggatc
     2641 gatcctgcgc cggctccaga ccggaaagct gtaccactac gtgttcgtgc tggcaggcgg
     2701 tgcgctcatc attttcctga tcaaggcgtt ctaagaacgg aggtggtcgt ccgtggggtt
     2761 catcgatagt cacattctct cgttcatgac gttcctgccg ctcctcgggg cggcggtgat
     2821 cctctgcgtg ccgaagggga aggacgagac gatcaagtgg atcgccgccc tcgcctcgtt
     2881 cctcccgctg ctgctggcgg tgcgcctctg gttcacctac gaccggtccc tggccggcgt
     2941 caacgtggcc agccagttcc agttcgtgga gcactactcc tggatcccct cgatcaacgt
     3001 ggagtacttc gtgggcgcgg acggcatctc gatgcccatg ctcctcctga cggccctgct
     3061 ctcgttcctg gcggtcatcg gctccttcgg gatcgacaag aagatccggg ggtacatggc
     3121 cctcttcctc ctcctcgaga ccggcatgat gggcaccttc atcgccctcg acttcttcct
     3181 cttctacgtc ttctgggaag tgatgctgct gccgatgtac ttcctcatcg gcgtctgggg
     3241 cggaccgcgg aaggagtacg cggcgatcaa gttcttcctg tacaccctgg cgggctcgat
     3301 cctgatgctg atcgtgctgc tggccctcta cttcaacacg acgaatcccg agacgggagc
     3361 gcacaccttc aacctgctcc actacatgtc ccagaacacg cacaacgcct ggctgaaagg
     3421 gttcgacgtc cgcatcctcc tgttcctcgg cctgttcatc ggcttcgcca tcaaggtccc
     3481 gctcttcccg ttccacacgt ggctccccga tgcccacgtc gaggcgccca ccgccatttc
     3541 ggtcatcctg gcgggcgtcc tcctgaagat ggggacgtac ggcctgatgc ggatctcctt
     3601 cccggtcttc cccgacgtga cggtgtattt cgccctcccg atggcgatcc tcggagtgat
     3661 caacatcatc tacggcgccc tgtgcgcgat ggcgcagtcc gacctgaaga aactggtcgc
     3721 ctactcctcc gtcagccaca tgggcttctg cctcctcgga atggcggcgc tgacgccgct
     3781 ggggatggtc ggcgcgtcga tgcagatgtt ctcccacggc atgatcaccg ccatgctctt
     3841 cttcctggtc ggcgtggtct acgaccgggc gcaccaccgc cagatcgacg gcttcggcgg
     3901 cctgggcgcc gtggttcccg tctacaccgc cttcatcggc ttcgcgttct tcgcatccct
     3961 tgggctgccc ggaatgtcgg gcttcatcgc cgagcagatg gtcttcctcg gcaccttcgg
     4021 ggtgttccgg accctggtga tcatcgcggc gctggggatc atcttcgtcg ccgcgttcca
     4081 cctctgggcg ctgcagcggg tcttcctcgg accgctgaac ccgaagtacg cgacccttgc
     4141 cgagatcaac gggcgggaga tcttctgcct ggcgcccttg gcagtcctga tcatgatcgt
     4201 cggcgtctgg ccgatgccgg tgctggacct catgaacgcc tccctggtgc ggctggtcga
     4261 cctcgtgaag gtggtgatct agcgtgtttc taggcaacct cgccagcgtg gggtacttcc
     4321 tgccggagtt cgccgtcacg gcgacgatcc tcctgctgat cgtgctccac gtggtcacga
     4381 agagcccgaa gtccaccgcg tccgggttcc tgtcgctcat cggtgtgggg gccgcgatcc
     4441 tcttcgcggg ggtcgtgccg gcgggcgccg gccggtcgat cttcgagggg atggtggccc
     4501 acgacgggtt cgcggtcttc ttcaaggtcc tgacggccct ggccaccctc gtggtgatct
     4561 tcatgtcgat ggacagcagg gacctggccg gtcggagcca ggcggagtat tacatcttcc
     4621 tgctctccac cctgctcggg atgttcctgc tctcctcggc gaccgacatc gtgatgctgt
     4681 acctggcgct ggagctcgtc tccatcccct cgtacctgct ggcggggtac ctcaaagggc
     4741 aggagcattc cactgaggcc gcgatgaagt acgtggtgta cggggccacg gcgtcgggcg
     4801 tgatgatcta cggcttctcc ctccttttcg ggctgaccgg ttcgacccag atcgcggaga
     4861 tcgggcggag cctggcggcc gggaaggcga cactgcccat gctgctggcc gccgtgatgg
     4921 tggccgtggg gttcgggtac aagatcgccg cggtgccgtt ccacatgtgg agccccgacg
     4981 tgtacgaagg ggcccccacg cccgcgaccg ccttcttctc cgtcgggccg aaggcggcgg
     5041 ggttcgccgt cctcgtccgc ttctacttca cggtgtttgc cgcttccgag cccggcacgg
     5101 gcctgtggcg cctgacctcc gcggtggact ggccgttcct gttcgccgcg ctgtcggcgc
     5161 tgacgatgac cgtggggaac ctggtcgcgg tcaagcagag caacgtgaag cggctcctgg
     5221 cctactcctc gatcgcccac gccggataca tgctgatggg gttcgtgctc ctctcttccg
     5281 cggggatcca ggcgatcctg ttctacctcg tggtctacct cttcatgaat ctcggagcct
     5341 tctacgtcgt ggtcctggtg agcaacgcga cccggggaga ggatatctcc gacttcacgg
     5401 ggttgggcag ccgcgccccg ttcgcggcgg tggcgctctc catcttcctg ttctcactga
     5461 ccgggatccc gccattctcc ggcttcatcg gcaaggtcta tctgttcgcc gaggtcatcc
     5521 accgcggggt atactggctc gcggtcgtcg cggcgctgaa cagcgtggtg tcgctctact
     5581 actacgcccg gatcgtacgg gcgatgttcc tcca
//
LOCUS       DATGYW010000104         1642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_116020, whole genome shotgun sequence.
ACCESSION   DATGYW010000104 DATGYW010000000
VERSION     DATGYW010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1642
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116020"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..731
                     /locus_tag="VK429_01400"
     CDS             <1..731
                     /locus_tag="VK429_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012646851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid dehydrogenase"
                     /protein_id="HLN90497.1"
                     /translation="VTADEFNKEFDGLLFTVPADLFIPAGGRPETVDATNWMRFFGLN
                     GAPTARVIVEGANSFLTPEARTELQKRGMVVLRDASANKCGVISSSYEIIGNLLMTGK
                     EFLAHKEEYVRDVLAILEKRAEDEALLIFRRKREAGASLSYTEISDAISVEINGHYAR
                     LFDFFRSRPALAQSPPYHRALLSHLPRFLSGNARFRRRIPGLPAKYRFAILASEIAST
                     IVYRGGFEQDLEGDLNRYAAKMFP"
     gene            848..1513
                     /locus_tag="VK429_01405"
     CDS             848..1513
                     /locus_tag="VK429_01405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015721673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b subunit"
                     /protein_id="HLN90498.1"
                     /translation="MRLLSDSIGRKAVVAVTGLFMVLFVVVHLLGNSTIFAGPDGINA
                     YADKLHGLGPFVWAFRAFMAVMLCLHVIFAVLLTLENRAANPEKYAVKRMLKTTFAGE
                     TMIWTGLLLLAFIVYHLLQFTVRITPDIVLGNDAKNRVDVFTMVFTSFRITPIALVYV
                     AAMVTLFLHLSHGIQSIFQTIGLNNDKTMPQFNALGKVLSAIFLVGYSAIPVLILAGI
                     LAK"
BASE COUNT          307 a          537 c          488 g          310 t
ORIGIN      
        1 gggtcacagc ggacgagttc aacaaggagt tcgacgggct cctcttcacc gtccccgccg
       61 acctcttcat cccggcgggg ggacgtcccg aaacggtgga cgccacgaac tggatgcgct
      121 tcttcgggtt gaacggggcg cccacggccc gcgtgatcgt cgagggggcg aactcctttc
      181 tcacccccga ggcccggacg gagctccaga aacggggcat ggtggtcctg cgggacgctt
      241 ccgcgaacaa gtgcggcgtc atctcctcct cctacgagat catcggcaac ctgctgatga
      301 ccgggaagga gttcctcgcg cacaaggagg agtacgtccg ggacgtgctg gccatcctgg
      361 aaaaacgggc ggaggacgag gcgcttctca tcttccggcg gaagcgtgaa gcgggagcgt
      421 cgctgtcgta caccgagatc tctgacgcga tcagcgtcga gatcaacggc cactacgccc
      481 gtctgttcga ttttttccgg tcgcggcccg cgttggcgca gtcccctccg taccaccgcg
      541 cgctcctgtc gcaccttccg cggttcctga gcgggaacgc aaggtttcgc cgccggattc
      601 ccggtctccc cgccaaatac cggttcgcga ttctcgcgag cgagatcgcg tcgacgatcg
      661 tctaccgggg cgggttcgag caggatctcg agggggacct gaaccggtac gcggcgaaga
      721 tgttcccctg acattctgca cactgtatcc attgacattc cctcggcgtt cgtcctatcc
      781 ttagcgcatt ccggcatctt gtcgcgactt caaaagcagc agaaatccac aaaagaggga
      841 agggctcatg cgactacttt cggactcgat cggaaggaag gcggtagtgg cggtgacggg
      901 gctgttcatg gtcctgttcg tcgtcgtgca ccttctcggg aactccacca tcttcgcggg
      961 gccggacggc atcaacgcct acgcggataa actccacggg ctcggtccct tcgtgtgggc
     1021 gttccgggcg ttcatggcgg tgatgctctg cctccacgtg atcttcgccg tcctgctgac
     1081 cctcgaaaac cgggcggcga acccggaaaa gtacgccgtc aagaggatgc tgaagacgac
     1141 cttcgccggc gagacgatga tctggaccgg gctcctgctg ctggccttca tcgtctacca
     1201 cctgctgcag ttcaccgtcc gcatcacccc ggacatcgtc ctggggaacg acgcgaagaa
     1261 ccgcgtggac gtcttcacca tggtcttcac cagcttccgg atcaccccga tcgccctggt
     1321 gtacgtcgcc gccatggtga cgctcttcct gcacctgtcc cacgggatcc agagcatctt
     1381 ccagacgatc gggctgaaca acgacaagac catgccgcag ttcaacgcgc tggggaaagt
     1441 cctctccgcc atcttcctcg tgggctacag cgccatcccc gtgctcattc tcgccggcat
     1501 cctggccaaa taagggagga aacaccgtga tcctcgacgg aaaggcaccg accggcccca
     1561 tcgaacagtc gtgggacaag caccggttcg agatgaagct ggtgaacccc tcgaacaagc
     1621 gcaagtacaa gatcctcgtg gt
//
LOCUS       DATGYW010000105         1839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_63368, whole genome shotgun sequence.
ACCESSION   DATGYW010000105 DATGYW010000000
VERSION     DATGYW010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63368"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..1008
                     /gene="pstS"
                     /locus_tag="VK429_01410"
     CDS             1..1008
                     /gene="pstS"
                     /locus_tag="VK429_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015837785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0042301 - phosphate ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HLN90499.1"
                     /translation="MLGVVSFASAADPLTINGAGATFPYPLYSKWFYEYSNANPGVRF
                     NYQSIGSGGGIKQIIAGTVNFGATDAPMTEEEMKKTPGPILHIPTALGAVVPVYNLAG
                     VESGLKLTPDVLAGIYLGKITRWNDPRIAELNRTVTMPNADIVVAHRSDGSGTTDIFT
                     NYLTTVNTEWRAKVGHGKAVKWPVGIGGKGNEGVAGVVKQTPGAIGYVELAYAKQNRM
                     KAASLRNREGHFVAPTLEATSAAAAGVAKSMPADFRVSLVDAPGKDSWPISGLTWLLV
                     YRDQKDAAKGKAVVQFLKWAIRDGQKMEPALDYAPLPKDVVEKVDKALRRISFMGKPL
                     Y"
     gene            1012..>1839
                     /gene="pstC"
                     /locus_tag="VK429_01415"
     CDS             1012..>1839
                     /gene="pstC"
                     /locus_tag="VK429_01415"
                     /inference="COORDINATES: protein motif:HMM:TIGR02138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HLN90500.1"
                     /translation="MAPRSGKISKDLAFEKASAFFASVVLFLAALLFAVLLRESLPAL
                     RKFGASFIVSGNWDPVLEQFGALPFIYGTVVSSFLALLIAVPLSVGAAIFIDEFAPPW
                     LKTPVSLLAELLAAIPSVIYGLWGIFVLVPILRDVFMKPVAKYLGWIPLFKGPVYGPS
                     MFAAGVLLAIMIIPFILSVTREVLATVPQRQKEAVLSLGGTRWEMLRIVIGQHCLPGI
                     FGATVLGLGRALGETMAVTMVIGNRPEIFASVFQQGYSMAAVIANEFSEAGGLQLSSL
                     "
BASE COUNT          310 a          603 c          605 g          321 t
ORIGIN      
        1 atgctcggtg tcgtgtcctt tgcgtccgcg gcggatccgt tgacgatcaa cggggcgggg
       61 gcgacgttcc cctatccgct ttactcgaag tggttttatg aatattccaa cgccaacccg
      121 ggcgtccggt tcaactacca gtcgatcggt tccggcggcg ggatcaagca gatcatcgcg
      181 ggaacagtga acttcggcgc aacggacgca ccgatgacgg aagaggagat gaagaaaacc
      241 cccggaccca tcctccacat cccgaccgcg ctcggggcgg tggtcccggt ctacaacctc
      301 gcaggcgtgg agagcgggct gaaactcacg ccggacgtcc tcgccggcat ctacctcggc
      361 aagatcaccc gctggaacga cccgaggatc gcggaactga accggacggt gacgatgccg
      421 aacgcggaca tcgtggtcgc ccaccgctcc gacgggtccg gaaccacgga catcttcacg
      481 aactacctga cgacggtgaa caccgagtgg cgcgcgaagg tcggccacgg caaggcggtc
      541 aagtggccgg tgggaatcgg aggcaagggg aacgaaggcg tggccggcgt tgtgaaacag
      601 acgccggggg ccatcgggta tgtcgagctc gcctacgcca agcagaacag gatgaaagcg
      661 gcgtcgctgc ggaaccggga ggggcacttc gtcgctccca ctctggaagc gacgtcggcc
      721 gccgccgcgg gggtggcgaa gtcgatgccc gccgatttcc gcgtctcgct ggtcgacgcc
      781 cccggaaagg actcctggcc catctccggg ctgacctggc tcctggtcta cagggaccag
      841 aaagacgccg cgaaggggaa ggccgtggtc cagttcctca agtgggcgat ccgggacggc
      901 cagaagatgg aacccgcgct cgactacgct ccgctgccga aggacgtggt cgagaaggtc
      961 gacaaggcgc tcaggcggat ctccttcatg gggaagcccc tgtactgacc catggcgcca
     1021 cgatccggaa agatatcgaa ggatctcgcg ttcgaaaagg catccgcctt cttcgcttcc
     1081 gtggtcctct tcctcgcggc gctcctgttc gccgtgctgc tgcgggagtc gctccccgcc
     1141 ctgcggaagt tcggggcctc cttcatcgtc tccgggaact gggacccggt cctcgagcag
     1201 ttcggggcgc ttcccttcat ctacggaacc gtggtctcct cctttctcgc cttgctgatc
     1261 gcggtcccgc tcagcgtggg ggcggccatc ttcatcgacg agttcgcgcc cccatggctg
     1321 aaaacccccg tatcgctgct ggcggagctc ctcgccgcca tccccagcgt catctacggc
     1381 ctgtggggga tcttcgtcct ggtgccgatc ctcagggacg tgttcatgaa accggtggcg
     1441 aaatacctcg gctggatccc cctcttcaag gggccggtgt acggcccgag catgttcgcg
     1501 gcgggggtgc tcctcgcgat aatgatcatc ccgttcatcc tgtcggtcac ccgggaggtg
     1561 ctggccaccg tcccgcagcg gcagaaggag gcggtcctct cgctcggggg cacccgatgg
     1621 gagatgctcc ggatcgtgat cgggcagcac tgcctccccg ggatcttcgg cgccaccgtc
     1681 ctcggcctcg ggcgggcgct gggggagacg atggcggtca cgatggtgat cgggaaccgg
     1741 cccgagatct tcgcctccgt gttccagcag gggtactcca tggcggcggt gatcgccaac
     1801 gagttctccg aggccggcgg cctccagctc tcctcgctc
//
LOCUS       DATGYW010000106         1784 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_330150, whole genome shotgun sequence.
ACCESSION   DATGYW010000106 DATGYW010000000
VERSION     DATGYW010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_330150"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1784)
                     /locus_tag="VK429_01420"
     CDS             complement(<1..>1784)
                     /locus_tag="VK429_01420"
                     /inference="COORDINATES: protein motif:HMM:NF012364.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase domain-containing protein"
                     /protein_id="HLN90501.1"
                     /translation="GDGTIRSARVLDSPWDVDAPHPSFSIALLRMEGTGHPAHRRVRP
                     LELIVDGVTHGLLWENGADFLRELARLIERADPDLLVTEYGDDWLLPRLLALAGQLRS
                     PLSLGRAPRTPDDVFGALRSQGTGVQPAAPGVRGGRERSYVSYGRVIFRAAPHTLSGR
                     WHVDARNSFLFGETGLPGLVELSRLSGIPLQRVARTSPGTAISAMQVATAIKGGILVP
                     YKKREPEAFKTGVDLVVTDKGGLTYLPRPGAHENVGELDFASMYPSLMDRYNISPETI
                     NCACCRPGLPVPEIGAHTCLRRRGLVPDTIAPILLKRRFLKERQKAATEPEARELFRK
                     RQTALKWLLVVCFGFLGYRNARFGRIEAHEAVTAWGREKLLSAKEIAELEGFVFLHGL
                     TDAIWVKKEGATEDDYRRLSERITAETGMPIALEGVYKWLAFLPSKRKPQVAVPNRFV
                     GVFGNGEIKARGIALRRSDTPPLVAALQREFLERMAKAGGLPELRAMLPELRRVVDAA
                     VSELRSGRIPVEGLAIARRLSKAPERYVADTASAAATRELCGRGVDLRPGSKIRYLLA
                     DRSGRAMGFLDGTETPDVGRYEEMLREAG"
BASE COUNT          277 a          631 c          615 g          261 t
ORIGIN      
        1 cccgcttcgc gcagcatctc ctcgtaccgt ccgacgtccg gggtctcggt cccgtcgagg
       61 aaccccatgg cgcggccgct ccggtccgcc aggaggtaac ggatcttcga ccctgggcgc
      121 aggtccacgc cgcggccgca cagctcccgg gtcgccgcgg cggaggccgt gtcggcgacg
      181 taccgttccg gggccttcga caggcgccgc gcgatcgcca gcccttcgac cgggatccgc
      241 ccgctccgaa gttcggaaac ggcggcgtcg acaaccctgc gcaactccgg cagcatcgcc
      301 ctcagttccg gaagaccgcc ggccttcgcc atccgttcga ggaactcccg ctgaagcgcg
      361 gccaccagcg gcggggtgtc ggagcggcgc agggcgatcc cccgggcctt gatctccccg
      421 tttccgaaca ctccgacaaa ccggttgggg accgccacct gcggtttccg cttcgatggg
      481 aggaaggcga gccacttgta gaccccttcg agcgcgatcg gcatccccgt ctccgcggtg
      541 atccgctccg agagcctgcg gtaatcgtcc tccgtcgctc cttccttttt cacccagatc
      601 gcgtccgtca gcccgtggag gaagacgaac ccttccagct cggcgatctc cttcgcggac
      661 aggagtttct cccttcccca ggcggtgacc gcctcgtgcg cctcgatccg tccgaaccgg
      721 gcgttccggt agccgaggaa accgaagcag accacgagga gccatttgag cgcggtctgc
      781 cgcttccgga agagctcccg cgcctccggc tccgtcgccg ccttctgccg ctccttcagg
      841 aaccggcgct tgaggaggat cggggcaatc gtgtcgggga cgagccccct gcggcggagg
      901 caggtgtggg cgccgatctc cgggacgggg aggccgggac ggcagcaggc gcagttgatc
      961 gtctcgggag agatgttgta ccggtccatg agcgacggat acatcgacgc gaagtcgagc
     1021 tcccccacgt tctcgtgcgc cccggggcgt ggaaggtacg tgagcccgcc cttgtcggtg
     1081 acgacgagat ccacgccggt cttgaacgcc tccggctccc gcttcttgta cggaacgagg
     1141 atccccccct tgatggcggt cgccacctgc atcgcggaga tggcggtccc cggcgacgtc
     1201 cgggcgacgc gctgcagcgg gatgccggag aggcgggaga gttcgacgag gcccggcagc
     1261 ccggtctcgc cgaagaggaa cgagttgcgg gcgtccacgt gccaccggcc cgagagggtg
     1321 tgcggcgcgg cacggaagat cacccggccg tacgacacat acgaccgttc ccgaccgcct
     1381 cgaacacccg gggcggcagg ctggacaccc gtgccctgac tccgtaacgc gccgaagacg
     1441 tcgtcggggg ttcggggagc gcgccccagg gaaagcggcg agcgaagctg gccggccagc
     1501 gcgagcaacc gcgggagcag ccagtcgtcg ccgtactcgg tgacgagcag gtcggggtcg
     1561 gcccgttcaa tgagccgagc cagttcccga aggaagtccg ccccgttctc ccagagaaga
     1621 ccgtgcgtca cgccgtcgac gatgagctcg agcgggcgga cgcgccgatg cgccgggtgg
     1681 cccgtccctt ccatccggag gagcgcgatc gaaaaggagg gatgcggcgc gtccacgtcc
     1741 cacggggaat cgagaacgcg ggcggagcgg atcgtcccgt cgcc
//
LOCUS       DATGYW010000107         1828 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_116463, whole genome shotgun sequence.
ACCESSION   DATGYW010000107 DATGYW010000000
VERSION     DATGYW010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116463"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..512)
                     /locus_tag="VK429_01425"
     CDS             complement(114..512)
                     /locus_tag="VK429_01425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011938505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HLN90502.1"
                     /translation="MKLKTSEDHQQIGELSRALGVTTRTLRLYEQMGLIEPPQRTEGG
                     IRYYTKEDIQRIKFVLKLKELGLSLQQMQELAEIYSETKMPDKVMPRLIELLDSHTDA
                     IHRRIGKLSSLARDISEYRKRIVDFYGIPR"
     gene            604..>1828
                     /locus_tag="VK429_01430"
     CDS             604..>1828
                     /locus_tag="VK429_01430"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HLN90503.1"
                     /translation="MHGTPPGGALEGERKLAAILNSLGEAVITVDRDHRISHFNRAAS
                     LLVGIPAGEAEGMDCREVLRASFGPAQHDCPMGELGEGGKPRIDVEGTLVRADGRIVP
                     VSASWAFFTSESGEVHGFVISFRSFEEIERIAEERKSKFPFRDIVGKTPRIRRIFDLI
                     EMVKDSDSTVLITGESGTGKGLFARAIHDLSPRREKPFVKVNAAALTESLLESELFGH
                     VKGAFTGAVADKVGRFEAADGGTVFLDEIGEISPALQVKLLRVLQDHEFERVGSSRTQ
                     HADVRVIAATNRELKEEMRAGRFREDLFYRLNVIPLVVPPLRERREDIPLLVDHILKA
                     LRKRGLDRVRAVSPEAMRRLMEYPWPGNVRELENVLERGTVCSRGAVLGLEDIADEVR
                     EQDRARPKETASVPSS"
BASE COUNT          303 a          588 c          601 g          336 t
ORIGIN      
        1 acccccactg taggaaaaac ggggggcacc ccactcccct atatattgcg ctccctgggg
       61 tacccccgct gtaggaataa cagggggcac gagcccgggt cccttccgac ttcctatcgt
      121 gggatgccgt agaagtcgac gatccgcttc cggtactccg agatgtcccg cgcgagcgag
      181 gataattttc cgatcctccg atggatcgcg tccgtgtggg agtcgagcag ctcgatcagt
      241 cggggcatga ccttgtccgg catcttcgtc tcgctgtaga tttccgcgag ttcctgcatc
      301 tgctggagcg acagccccag ttccttcaat ttcaggacga acttgatccg ctggatgtcc
      361 tctttcgtgt aataccggat ccccccctcg gtccgctgcg gcggttcgat cagccccatc
      421 tgctcgtaga gccggagcgt ccgggtcgtt accccgagcg cacgggaaag ctccccgatc
      481 tgctggtggt cttcgctggt tttcaacttc atttgtactt tacctcaacg ttaatgttaa
      541 ccatcggccc cacgggtgtc aaggtcttct ggtacacttg atggcatggg aagcgacgat
      601 ctgttgcacg gcacgccccc cggcggcgcg ctcgaagggg agcggaagct cgcggcgatc
      661 ctgaacagcc tgggcgaggc ggtcatcacc gtcgaccgcg accaccggat ctcccacttc
      721 aatcgcgccg cttcgctgct ggtcgggatc cccgccgggg aggcggaggg gatggattgc
      781 cgcgaagtgc ttcgcgcctc cttcggcccc gcgcagcacg actgcccgat gggagagctc
      841 ggcgaggggg gaaagccccg catcgatgtc gagggtaccc tcgtccgcgc ggacggccgc
      901 atcgttccgg tttccgcgag ttgggcgttc tttacgagcg aatcgggcga ggtccacggc
      961 ttcgtcatct ccttccgcag cttcgaggag atcgagcgga tcgccgagga gaggaagtcg
     1021 aaattcccgt tccgcgacat cgtcggaaag acgccgcgga tccggcggat cttcgatctc
     1081 atcgagatgg tgaaggactc ggattccacc gtcctgatca ccggggagag cgggaccggg
     1141 aaagggctgt tcgcccgcgc gatccacgat ctgtcgcccc gcagagagaa accgttcgtc
     1201 aaggtgaacg cggcggccct cacggaatcg cttctggaat ccgagctgtt cggccacgtg
     1261 aagggagcct tcacgggcgc cgtggcggac aaggtggggc ggttcgaggc ggccgacggc
     1321 ggtacggtct ttctcgacga gatcggcgag atctccccgg ccctccaggt gaagctgctt
     1381 cgcgtcctcc aggaccacga attcgagcgc gtcgggagca gcaggacgca gcatgccgac
     1441 gtgcgggtga tcgcagccac gaaccgggag ctgaaggagg agatgcgcgc cggccggttc
     1501 cgggaggacc tcttctaccg cctgaacgtc atccccctcg tcgtcccgcc gctgcgcgag
     1561 cgtcgggagg acatcccgct gctggtcgat cacatcctga aagccctccg gaagcgcggg
     1621 ctcgaccggg tgcgcgccgt ctcccccgag gcgatgcgcc gcctgatgga gtatccgtgg
     1681 cccggcaacg tgcgggagct cgagaacgtg ctggaacggg ggaccgtctg ctcccggggc
     1741 gcggtcctcg ggttggagga tatcgcggac gaggtccgcg agcaggaccg cgcccgcccg
     1801 aaggagacgg cttccgttcc ctcctcgg
//
LOCUS       DATGYW010000108         1633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_63462, whole genome shotgun sequence.
ACCESSION   DATGYW010000108 DATGYW010000000
VERSION     DATGYW010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63462"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VK429_01435"
     CDS             complement(<1..363)
                     /locus_tag="VK429_01435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007645282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLN90504.1"
                     /translation="MTRPEPPDVGIRALIPREIVAELDRHIVGQAGAKRAVAIALRNR
                     WRRLQVPAELRDEIVPKNIIMVGPTGVGKTEIARRLARLAQAPFVKVETSKFTEVGYV
                     GRDVESMIRDLVEVAVRMV"
     gene            complement(360..902)
                     /gene="hslV"
                     /locus_tag="VK429_01440"
     CDS             complement(360..902)
                     /gene="hslV"
                     /locus_tag="VK429_01440"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006556650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HLN90505.1"
                     /translation="MTEFRGTTIVAVARGGRVAVAGDGQVTMGNVVLKRTAKKIRRLH
                     DGHVVAGFAGSTADAFTLFEKFEAKLSEFRGNLRRAAVELAKDWRTDRMLRRLEALMV
                     VTDGKDLMLLSGTGDVVEPDDGVIGIGSGGSFALAAARALLLHSDLPAGEIAREAVRI
                     ASEICVFTNGNVVSEEIEEP"
     gene            complement(899..>1633)
                     /locus_tag="VK429_01445"
     CDS             complement(899..>1633)
                     /locus_tag="VK429_01445"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HLN90506.1"
                     /translation="VRTFLGFLVAQGEIDANPAVGIPAPRKAMRLPEFLPVDEMDAFL
                     RDLPCGTLREKRDAAILELLYSSGLRVGELCSLRMRDLSTESSTVRVTGKGRKVRVVP
                     VGGKAVAALGRYLAVRPPAQGGGFRGGLDEPLFLNLRGSVGRESGRGISPRSVARILR
                     ERLDARVGAIGRHLSPHGMRHSFATHLLESGADLRAIQEMLGHASLSTTQRYARVNVG
                     HLVRTYERAHPLATRPGISRREGRGK"
BASE COUNT          248 a          624 c          518 g          243 t
ORIGIN      
        1 gaccatccgg acggcgacct ccacgaggtc ccggatcatc gactcgacgt cccgccccac
       61 gtaccccacc tcggtgaact tcgacgtctc caccttgacg aagggggcct gcgccagcct
      121 ggcgagcctc cgcgcgatct cggtcttccc gacgcctgtc ggccccacca tgatgatgtt
      181 cttcgggacg atctcgtcgc gcagctcagc cgggacctgc agccggcgcc agcggttccg
      241 cagcgcgatc gcgaccgccc gcttcgcacc cgcctgcccg acgatgtgcc ggtcgagctc
      301 ggcgacgatc tcacggggga tcaacgcgcg gatcccgacg tccggcggtt ccgggcgcgt
      361 catggctctt cgatctcctc ggacacgacg ttcccgttcg tgaagacgca gatctccgag
      421 gcgatccgca cggcttcccg ggcgatctcc ccggcgggga ggtccgaatg gagaaggagc
      481 gcgcgcgcgg ccgccagggc gaacgacccg cccgaaccga ttccgatcac gccgtcgtcc
      541 ggctccacca cgtccccggt ccccgaaagg agcatgaggt ccttcccgtc ggtaaccacc
      601 atcagcgcct cgagccgccg aagcatgcgg tccgtgcgcc aatccttcgc cagctccacg
      661 gcggcgcgcc gcaggttccc acggaactcc gacagcttcg cctcgaactt ctcgaacagg
      721 gtgaacgcat cggcggtgct cccggcgaat cccgcgacaa catgcccgtc gtgcagccgc
      781 cggatcttct tcgccgtccg cttgagcacg acgttcccca tcgtgacctg accgtccccc
      841 gcgacggcaa cccgcccccc gcgggcgacg gcgacgatcg tcgttccacg gaactccgtc
      901 actttcccct cccctcacgc cgtgagatcc ccgggcgggt tgcgagcggg tgcgccctct
      961 cgtacgtccg gacgaggtga cccacgttga cccgcgcgta ccgctgcgtc gtcgagagcg
     1021 aggcgtggcc gagcatctcc tggatcgcgc ggaggtccgc ccccgattcg agcagatggg
     1081 tggcgaagga gtgtcgcatc ccgtggggcg acaggtggcg gccgatcgcg ccgacccgcg
     1141 cgtcgagccg ctcccggagg atcctcgcca cgctcctggg ggagatcccc cgtcccgatt
     1201 cccttccgac gctccctctc aggttgagga agagcggttc gtccagcccg ccgcggaacc
     1261 cgcccccttg cgcggggggc cggacggcca ggtacctccc gagcgcggcg accgccttcc
     1321 cgccgacggg gacgacccga acctttctcc ccttccccgt gacgcggacg gtggaggatt
     1381 cggtggagag gtcccgcatc cgcagggaac agagttcccc gacgcgaagc ccggacgagt
     1441 acaggagctc gaggatcgcg gcgtcccgct tctcccggag ggtcccgcac ggaagatccc
     1501 gcaggaaagc gtccatctcg tcgacgggga gaaactccgg cagccgcatc gccttccgcg
     1561 gcgcggggat ccccacggcg ggattggcgt cgatctcccc ctgtgcgacg agaaaaccga
     1621 ggaaggtcct tac
//
LOCUS       DATGYW010000109         2042 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_383685, whole genome shotgun sequence.
ACCESSION   DATGYW010000109 DATGYW010000000
VERSION     DATGYW010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_383685"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..368
                     /locus_tag="VK429_01450"
     CDS             <1..368
                     /locus_tag="VK429_01450"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLN90507.1"
                     /translation="YTWFYRLLVNQAIDRWRKSARSAEVPFDESWLSEDASPPDAFAY
                     PRTPEDLVRDRELGDALQRALDDLPEYHRAVIVLREVDGMAYDEIAKALGCSVGTVMS
                     RLHYARAKLKESLKAHREG"
     gene            382..858
                     /locus_tag="VK429_01455"
     CDS             382..858
                     /locus_tag="VK429_01455"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HLN90508.1"
                     /translation="MDCRAALEKIGSKADGLLPREAEAELSRHLAGCPACAAEDAAIS
                     ATGSMLRALTGIRAREKAPALDAMWTRVRAGIVESQEARRRPSWIARWGWIPAAVALA
                     VLALLFYPAGTDRSPFHPSTFDVAVEDVESDVATVALVDKGEDLPRVIWIIEDAKT"
     gene            845..1306
                     /locus_tag="VK429_01460"
     CDS             845..1306
                     /locus_tag="VK429_01460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90509.1"
                     /translation="MPRPDPRGRAGAPALFILLLLLLAAAPSEAANTVSVDVGAVYAS
                     NEGTSIDPALGTIRGKLLSMFNYTSYRMLDRKRRSLSVGETGEFELPGGRSMRATPLP
                     AQGDKVRLSIRISEGQKNLLTTTLGLRRGGMVLVGGPPHQSGVLILIISAE"
     gene            1374..1808
                     /locus_tag="VK429_01465"
     CDS             1374..1808
                     /locus_tag="VK429_01465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90510.1"
                     /translation="MKKLIAMILTVGLFAAIPGSASAEWRNGAYGHGGYQGHGGYYGH
                     GGYGAGAFFVGLLGGAILGNVLAHSYEPAYAPAPRVYSAPPPEQVWVPGRYETRYERQ
                     WVPGHYEVQADGYSGGHRIWVPGHYEDVPARVWLPGHWEERG"
BASE COUNT          319 a          679 c          697 g          347 t
ORIGIN      
        1 tctacacctg gttctaccgc ctcctcgtga accaggcgat cgaccggtgg cgaaagtcgg
       61 cgagatccgc ggaggtgccc tttgacgaga gctggctttc cgaggatgcc tcgccgcccg
      121 acgccttcgc gtacccgcgg accccggagg acctggtccg ggaccgggag ctgggggacg
      181 ccctccagcg cgccctcgac gatctcccgg agtaccaccg ggcggtgatc gtcctccggg
      241 aggtggacgg gatggcgtac gacgagatcg ccaaggctct cgggtgttcg gtcggaacgg
      301 tgatgtcccg actgcactac gcgcgcgcca agctgaaaga gtccctgaag gcgcacaggg
      361 aaggatagga aaggaacgac gatggattgc agggcggcac tggaaaagat cgggtcgaag
      421 gccgatggcc tcctcccgcg ggaggcggag gcggagctgt cccgccacct ggccgggtgt
      481 cccgcgtgcg ccgcggagga tgcggcgatc tccgcgaccg gaagcatgct gcgcgccttg
      541 accgggatac gggcaaggga gaaggctccc gctctcgacg cgatgtggac gcgggtgcgc
      601 gcagggatcg tggagagcca ggaggcgcgg cggcgcccct cctggatcgc gcggtggggg
      661 tggatccccg cggccgtcgc ccttgcggta ttggcgctcc tgttctaccc tgccgggacg
      721 gatcgatcgc cctttcatcc gagcacgttc gatgtcgccg tcgaggacgt cgagtccgat
      781 gtcgccacgg tagcgctcgt cgacaaggga gaggaccttc cgagggtgat ctggatcatc
      841 gaagatgcca agacctgacc cccgtggccg cgccggcgcg ccggcccttt tcatcctcct
      901 gctcctgctg ctcgccgccg caccgtccga agccgccaat acggtttccg tcgacgtcgg
      961 ggcggtctac gcctccaacg aggggacctc gatcgacccg gccctcggga cgatccgggg
     1021 gaaactcctt tcgatgttca actacacctc ctaccggatg ctggaccgca agcgccgctc
     1081 gctttccgtc ggggagaccg gggagttcga gctgcccggc gggcgctcga tgcgggcgac
     1141 tcctctgccg gcacagggag acaaggtccg cctctccatt cggatctccg aagggcaaaa
     1201 gaacctcctc accaccaccc tcggactccg ccggggcggc atggtgctcg tcggcggccc
     1261 tccccaccag tccggcgtcc tgatcctcat catctccgcg gagtagtttt cggttgaata
     1321 tcctccacct ccccgccgtc gaagggttac gaaggggaag gaggaagatg accatgaaga
     1381 aactgatcgc catgatcctt actgttggac ttttcgcagc gattcccggc tccgcctccg
     1441 cggagtggcg caatggggcc tacggccatg gtgggtacca aggccacggc gggtattacg
     1501 gccacggcgg ctacggcgcc ggggcgttct tcgtcggact gctggggggg gccatcctcg
     1561 gcaacgtcct cgcgcactcc tacgagccgg cctacgctcc cgcgccgcgc gtctactccg
     1621 cgcctccccc ggagcaggtc tgggtgccgg gtcgctatga aacgcgatat gagcggcagt
     1681 gggtccccgg gcattatgag gtgcaggccg acggctactc cggggggcac aggatatggg
     1741 tccccggtca ctacgaggac gtccctgcgc gggtctggct gccgggtcac tgggaagagc
     1801 gcggatagcc gatcgccggt ttcgccggcg cggcgggcgt tcggcaacgc aacccgtcat
     1861 ctccgggggg aggccccccc ggaggaacca ttttatttac ccccgtttta cgcagccggg
     1921 ggcggtataa tccccgtcgt gggcaccggt gggcacgaca ggtctggatc cccgctgtgg
     1981 aactccctct ggaacctcct gttccgggtg ttgtcctcga cggatttcgc ccgcatcgca
     2041 tg
//
LOCUS       DATGYW010000110         1680 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_116574, whole genome shotgun sequence.
ACCESSION   DATGYW010000110 DATGYW010000000
VERSION     DATGYW010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1680
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_116574"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1680)
                     /locus_tag="VK429_01470"
     CDS             complement(<1..>1680)
                     /locus_tag="VK429_01470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004512301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HLN90511.1"
                     /translation="GEFLRADELERSAGVEHADWTLCVADGKGEVKIPHGSLGSRWSK
                     AEGKWNLDMKDMVDGSDIDCRLTFLGGETRNVRFRFETDGDVVREVPVRRIATRNGEV
                     TVTTVFDLLMAQFGVSRGLGGDYPQSYEQDKPFTPKWQEKYTGIAAGSMLKVAREWAE
                     NGEKSGGRNMIIVGAGINHWFHNDLIYRAAITSLLLTGSVGRNGAGLAHYVGQEKVVP
                     LAPWTSIAMAQDWVKPSRLQNTPSFWYIHSDQWRYDRSFVDYFKPETGEKMPLHAADM
                     NAKAVRLGWLPFAPHFNDSNLRLVDAAKAAGARTDEEIRGWLVARLKSGETRFAIEDP
                     DGEGNSPKVWFIWRANAISASAKGHEFFLKHVIGAPNSSFTAKEVAKGAVRDLVWHEK
                     APEGKMDLVVDLNFRMDTSTLYSDIVLPAATWYEKSDLNTTDMHSFINCLDAAVPPAW
                     ESKPDWKIFSMIARKVSELSGKHFPEPVKDIVAAPLLHDTPGEIAQRSVKDWKLGECE
                     PVPGKTMPNLAIVERDYVNLYNRFLSVGPGMGNLGAHGVSWEAGDVHEKLL"
BASE COUNT          247 a          552 c          541 g          340 t
ORIGIN      
        1 tcgaggagct tttcgtgcac gtcgcccgcc tcccagctga cgccgtgggc tcccaggttc
       61 cccatgcccg gtcccaccga caggaagcgg ttgtagaggt tcacgtagtc ccgctccacg
      121 atggccaggt tcggcatggt cttcccgggg accggctcgc attcgccgag cttccagtcc
      181 ttcacggatc tctgtgcgat ttcccccggg gtgtcatgga ggagcggggc ggcgacgata
      241 tccttcaccg gctcggggaa atgctttccc gacagctcgc tcaccttccg ggcgatcatg
      301 ctgaagatct tccagtccgg cttcgactcc cacgccggag gcacggcggc gtccaggcag
      361 ttgatgaagg agtgcatgtc ggtggtgttc agatcggatt tctcgtacca ggtggccgcc
      421 ggcaggacga tgtcggaata gagggtcgag gtgtccatgc ggaagttgag gtccaccacg
      481 aggtccatct tcccttcggg agccttctcg tgccagacca ggtctctcac cgcccctttg
      541 gcgacttcct ttgcggtgaa gctgctgttg ggggcgccga tcacgtgctt gaggaagaac
      601 tcgtgcccct tggcgctggc ggaaatggcg ttggcgcgcc agatgaacca gaccttgggg
      661 gagttcccct ccccgtccgg atcctcgatg gcgaaccgcg tctcgccgct cttgagacga
      721 gccaccagcc agccgcggat ctcttcatcc gttcgggcac ccgccgcttt cgccgcgtcc
      781 accagccgca ggttgctgtc gttgaaatgg ggggcgaagg ggagccagcc gaggcggacc
      841 gccttggcgt tcatgtccgc ggcgtgaagc ggcatctttt cgccggtttc cggcttgaag
      901 tagtcgacga agctccggtc gtatctccac tggtcggaat ggatgtacca gaagctcggg
      961 gtgttctgca ggcgggatgg cttcacccag tcctgggcca tggcgatgga ggtccagggg
     1021 gccaggggca ccaccttttc ctgaccgacg taatgggcga ggcccgcccc gttgcgaccg
     1081 acgcttcccg tcaggaggag ggaggtgatg gcggcccggt agatcaggtc gttgtggaac
     1141 cagtggttga tgccggctcc cacgatgatc atgttccggc cgccgctctt ctccccgttc
     1201 tcggcccatt cccgggcgac cttcagcatg gacccggcgg cgatcccggt gtacttctcc
     1261 tgccacttcg gtgtgaaggg tttgtcctgt tcgtagcttt gcgggtagtc gccgcccagg
     1321 ccgcgcgaga cgccgaactg ggccatgagg agatcgaaga cggtcgtgac tgtcacctcg
     1381 ccgttccggg tcgcgatccg ccggaccggg acttccctga ccacgtcccc gtcggtctcg
     1441 aaccggaagc ggacgttgcg ggtctcgccg cccaggaagg tcaggcggca atcgatgtcc
     1501 gagccgtcaa ccatgtcctt catgtccagg ttccacttcc cctccgcctt gctccagcgg
     1561 gaaccgaggc tgccgtgggg aatcttcacc tcccccttcc cgtccgccac gcagagggtc
     1621 cagtcggcgt gctcgacccc tgcgctccgc tcgagctcgt cggcccggag gaattcgccc
//
LOCUS       DATGYW010000111         2704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_438289, whole genome shotgun sequence.
ACCESSION   DATGYW010000111 DATGYW010000000
VERSION     DATGYW010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2704
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438289"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..917
                     /gene="argF"
                     /locus_tag="VK429_01475"
     CDS             <1..917
                     /gene="argF"
                     /locus_tag="VK429_01475"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011843843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HLN90512.1"
                     /translation="GKRDLLRILDLSDKAILSLIRSGMTWKRRGVSPRAPRPLAGKSL
                     AMIFQKASTRTRVSFEVAMSRLGGHALFLSPQDTQIGRGEPIRDTARVLSRYADAVMI
                     RTFGHETAVKLAASATVPVINGLTDAHHPCQILADLMTAAERGKNVRKMRVAFIGDGN
                     NVANSWVEAAHVLGFDLRIACPKGYEPDPAVRKDAGRLGRGEVRVLRDPAEAARGADV
                     LYTDVWTSMGQEVEARKRLAAFQGYCVDAALLRLANPRAIVMHCLPAHRGEEITEAVF
                     EGPHSVVFDEAENRLHVQMAVLEKFIKH"
     gene            914..2146
                     /locus_tag="VK429_01480"
     CDS             914..2146
                     /locus_tag="VK429_01480"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010940829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HLN90513.1"
                     /translation="MKNSRRYALKKVKKVVLAYSGGLDTSVILAWLVENYGCEVIAFV
                     ADLGQGEEMGPVRAKARKTGASKVYVENVQDEFVRDFVFPALMANAVYEGQYLLGTSI
                     ARPLIAKKQIEVARREKADAVSHGATGKGNDQVRFELTYYALMPGIHVIAPWREWDLT
                     SRTDLVNYAKKRGIPTPVTAAKPYSSDRNLLHISFEGGILEDPWMEPPESMFVLTRSP
                     EKAPNRPEYVEVDFTGGTPVAVNGKKMGPAKLLAHLNALGGRHGIGRVDLVENRYVGM
                     KSHGVYETPGGTILHAAHRAVESLTLDREVMHLRDSLMPRFAELIYNGYWYSPEMDLL
                     KGMVVATQENVTGTARLKLYKGGITVAGRKSPVSLYRTDFATFEKETVFNQADATGFI
                     KINALRLKIRSMLKQRKG"
     gene            2148..>2704
                     /locus_tag="VK429_01485"
     CDS             2148..>2704
                     /locus_tag="VK429_01485"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HLN90514.1"
                     /translation="MAKKKAWGGRFGGETDRFVEEFTASIPYDVLLYRHDIAGSVAHA
                     RMLGKRGILPKGEAERIVKALGAIRGEIESGKFPFDLSDEDIHMAIERRLIRRIGPVG
                     GKLHTGRSRNDQVATDLRLYLREEIDEVLRLLAEIEETVVSRAEELFGIVLPGYTHLQ
                     RAQPILFSHSLLAYREMFARDADRFL"
BASE COUNT          499 a          868 c          919 g          418 t
ORIGIN      
        1 gcgggaagag ggacctgctc cggatcctgg acctttccga caaggcgatc ctctccctga
       61 tccggtccgg gatgacatgg aagcgccgcg gagtatctcc gagggcgccc cgcccgctcg
      121 cggggaagtc gctggcgatg atcttccaga aggcgtctac ccggacccgc gtttcgttcg
      181 aggttgcgat gagccggctg ggcggccacg cgctcttcct gtccccgcag gacacgcaga
      241 tcgggcgggg ggagccgatc cgggacacag cgcgtgtcct ttcacggtac gccgacgccg
      301 tgatgatccg gacgttcggg cacgaaacgg cggtgaagct cgccgcgtcc gcgaccgtcc
      361 cggtgatcaa cgggctgacc gacgcccatc acccgtgcca gatcctcgcc gacctgatga
      421 ccgcggcgga gcgggggaag aacgtaagga agatgcgggt cgcgttcatc ggcgacggca
      481 acaacgtagc gaattcgtgg gtcgaggcgg cccacgtcct cggtttcgac ctgcggatcg
      541 cgtgcccgaa ggggtacgaa ccggatcccg cggttcggaa ggatgcgggg aggcttggcc
      601 gcggggaggt ccgggtcctc cgcgatcccg cggaagcggc gcggggggcc gacgttcttt
      661 atacggacgt ctggaccagc atgggacagg aagtcgaggc acggaagcgg ctcgccgcct
      721 tccaggggta ctgcgtcgac gcggcgctgc tgcgactggc gaatccccgg gcgatcgtga
      781 tgcactgcct ccccgcccat cgtggcgagg agatcaccga ggcggtgttc gaggggccgc
      841 actccgtcgt cttcgacgag gcggagaacc gcctgcacgt ccagatggcc gttctggaaa
      901 agttcatcaa acactgaaga attcaaggag gtacgcgttg aaaaaagtga agaaagttgt
      961 ccttgcatat tcgggggggc tggacacctc ggtcattctc gcgtggctcg tcgagaatta
     1021 cggttgcgag gtgatcgcct tcgtcgccga cctcgggcag ggagaggaaa tgggccccgt
     1081 gcgcgccaag gcgaggaaga ccggcgcctc gaaggtctac gtggagaacg tgcaggacga
     1141 gttcgtccgc gacttcgtct tccccgcgct catggcgaac gcggtctacg agggccagta
     1201 cctcctcggc acctccatcg cccggcccct gatcgcgaag aagcagatcg aggtggccag
     1261 aagggagaag gccgacgcgg tctcccacgg cgccaccggg aaggggaacg accaggtccg
     1321 cttcgagctc acctactacg ccctgatgcc cgggatccac gtcatcgccc cctggcgcga
     1381 atgggacctc acctcgcgga ccgacctcgt gaactacgcg aagaagcgcg gcatccccac
     1441 gccggtcacc gcggccaagc cgtactccag cgaccggaac ctgctccaca tcagtttcga
     1501 gggggggatc ctcgaggatc cgtggatgga accgcccgag agcatgttcg tcctcacccg
     1561 gtctcccgag aaggcgccga accgtcctga gtacgtggaa gtcgatttca cgggcggaac
     1621 ccccgtggcg gtcaacggga agaaaatggg gccggcgaag ctcctcgccc acctgaacgc
     1681 cctcggggga aggcacggca tcggccgcgt ggacctcgtc gagaaccggt acgtggggat
     1741 gaagtcccac ggcgtgtacg agacgccggg cgggacgatc ctgcacgcgg cgcaccgggc
     1801 cgttgaatcg ctcaccctcg accgcgaggt gatgcacctg cgcgattccc tcatgccccg
     1861 gttcgcggag ctcatctaca acggctactg gtattcgccg gagatggatc tcctcaaggg
     1921 gatggtcgtc gcgacccagg agaacgtgac gggcaccgcg cggctgaagc tgtacaaggg
     1981 cgggatcacc gtggccggcc ggaagagccc cgtgtccctc taccggaccg acttcgcgac
     2041 gttcgagaag gagaccgtct tcaaccaggc cgacgcgacc gggttcatca agatcaatgc
     2101 gctgcgcctc aagatccggt cgatgctgaa acaacgaaag ggctgacatg gcgaagaaga
     2161 aggcgtgggg agggcgcttc ggcggcgaaa ccgaccggtt cgtcgaggag ttcaccgcct
     2221 cgatcccgta cgacgtcctg ctctaccggc acgacatcgc cgggagcgtc gcccacgcgc
     2281 ggatgctggg gaagcggggg atccttccga agggcgaggc ggagcggatc gtaaaggccc
     2341 tgggggcgat ccgcggggag atcgaatcgg ggaaattccc cttcgacctc tccgacgagg
     2401 acatccacat ggcgatcgag cgtcggctga tccgccggat cggccctgtt ggcggaaagc
     2461 tccacacggg gcgcagccgc aacgaccagg tcgcaaccga cctccggctg tacctgcgcg
     2521 aggagatcga cgaggttctc aggctcctcg cggagatcga ggaaaccgtc gtctcccgtg
     2581 ccgaagaact gttcgggatc gtcctccccg ggtacaccca tctccagcgg gcgcagccga
     2641 tcctcttctc ccattccctc ctggcgtacc gggagatgtt cgcccgggac gccgaccggt
     2701 tcct
//
LOCUS       DATGYW010000112         2029 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_438415, whole genome shotgun sequence.
ACCESSION   DATGYW010000112 DATGYW010000000
VERSION     DATGYW010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438415"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..194)
                     /gene="rplF"
                     /locus_tag="VK429_01490"
     CDS             complement(<1..194)
                     /gene="rplF"
                     /locus_tag="VK429_01490"
                     /inference="COORDINATES: protein motif:HMM:NF012567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HLN90515.1"
                     /translation="MEAANGVLTVTGKLGKLARPIPGKLAVEVKDGAATVVLLDKDAE
                     NLYGMYRTILANMVQGVTDG"
     gene            complement(279..677)
                     /gene="rpsH"
                     /locus_tag="VK429_01495"
     CDS             complement(279..677)
                     /gene="rpsH"
                     /locus_tag="VK429_01495"
                     /inference="COORDINATES: protein motif:HMM:NF001109.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HLN90516.1"
                     /translation="MANNDHVSDLLARLRNAQQARFEQLEIPSTNILQGITQILKEEG
                     FIKGYRVVTEKNASRLRISLKSTPETGYAIKGIRRMSRPGRRLYVGKDGIPTVKNGFG
                     IAIVSTSRGVMTGEKAKKLSIGGELLCEIW"
     gene            complement(696..881)
                     /locus_tag="VK429_01500"
     CDS             complement(696..881)
                     /locus_tag="VK429_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011293056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HLN90517.1"
                     /translation="MAKKSIIAKSKRTPKFNVRKYNRCPRCGRPRAFYRKFQLCRICL
                     RQLALRGELPGVTKASW"
     gene            complement(902..1441)
                     /gene="rplE"
                     /locus_tag="VK429_01505"
     CDS             complement(902..1441)
                     /gene="rplE"
                     /locus_tag="VK429_01505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013706410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HLN90518.1"
                     /translation="MARLQDQYKAEIVPRLKEKFGYRNVMQVPRLSKVVVNMGLGDAI
                     ENVKVIETAAAEIGIITGQKPVVTKARKSIANFKLREGVPIGVMVTLRRDRMYHFLDK
                     LIAIALPRVRDFKGVSTRGFDGRGNYTLGIKEQIMFPEVNYDKIDKIRGMNITIVTTA
                     RTDEEGLELLRLMGIPFRA"
     gene            complement(1482..1823)
                     /gene="rplX"
                     /locus_tag="VK429_01510"
     CDS             complement(1482..1823)
                     /gene="rplX"
                     /locus_tag="VK429_01510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020878734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HLN90519.1"
                     /translation="METGNKTQIRKNDIVKVISGREKGKVGRVLKIDREKGRVFVEKL
                     NLVKRHTKPGKTTPQGGIVEKEAPLAYSNLLIMCDKCNKPTRIAMAVDGDGKRSRVCK
                     RCGDVLPAKKK"
     gene            complement(1838..>2029)
                     /locus_tag="VK429_01515"
     CDS             complement(1838..>2029)
                     /locus_tag="VK429_01515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uL14 family ribosomal protein"
                     /protein_id="HLN90520.1"
                     /translation="AVVVRTVKEIGRADGSFLRFDQNSAVLVNPQGEPIGTRIFGPVA
                     RELRARKYMKIISLAPEVL"
BASE COUNT          324 a          680 c          559 g          466 t
ORIGIN      
        1 aagccgtccg tgacaccctg caccatgttg gcaaggatcg tccggtacat cccgtaaaga
       61 ttctcggcgt ccttgtcgag gagaaccacc gtcgccgctc catccttaac ttccaccgcc
      121 agcttcccgg ggatcggtcg ggcaagcttc ccgagcttcc cggtgacggt cagcactccg
      181 ttcgctgctt ccacctttac tccggcggga aggaccacag gtcttttacc gattctcgac
      241 atcgtttcgc tcctcgttgg aaagaacccg gaagccgcct accagatctc gcagagcagc
      301 tcgccgccga tcgaaagctt cttcgccttc tcccccgtca ttacgccgcg cgacgtggag
      361 acgatggcga tgccaaaccc gttcttcacc gtcgggatcc cgtccttccc gacgtacagg
      421 cgccgtcccg gacggctcat ccgtcgaata cccttgatgg cgtatcccgt ttccggggtc
      481 gacttcaggg agatgcggag gcggctcgcg ttcttttcgg tcacgacccg gtaccccttg
      541 atgaaccctt cctccttgag gatctgcgtg attccctgaa ggatgttcgt cgaggggatc
      601 tccagctgct cgaagcgtgc ctgctgggcg ttccgcagcc gcgccagcag atccgacaca
      661 tgatcgttgt tcgccatcgt catgttcttc cccccctacc agctcgcctt ggtcacgccg
      721 ggcagctctc cgcgaagcgc gagctgcctc aggcagatcc ggcacagctg gaacttccgg
      781 tagaaagcgc gcggcctgcc gcagcgcgga caccggttgt atttccggac attgaatttc
      841 ggcgtccgtt tcgacttggc gatgatcgat ttcttggcca acgtctgctc tcctctcttg
      901 cttacgcccg gaagggaatt cccatgagcc gcagcagctc aaggccttct tcatcggtcc
      961 gggccgtggt cacgatggtg atgttcatgc cgcgtatctt gtcgatcttg tcgtaattca
     1021 cttcgggaaa catgatctgt tccttgatcc cgagggtata gttgccccgg ccgtcaaacc
     1081 ccctcgtgga aacccccttg aagtcgcgca cgcgcggaag ggcgatcgcg atcagcttgt
     1141 cgagaaagtg gtacatccgg tcccgccgga gcgtgaccat gacgccgatg ggaacccctt
     1201 cccgaagctt gaagttcgcg atgctcttgc gcgccttggt gacgacgggc ttctggccgg
     1261 tgatgatgcc gatctccgcg gcggcggtct cgatcacctt gacgttttcg atcgcgtcgc
     1321 cgagccccat attgacgacg accttggaga gcctgggaac ctgcatcacg ttcctgtacc
     1381 cgaacttctc cttgagcctg ggaacgatct ccgccttgta ctggtcctgc aatctcgcca
     1441 ttccgatcac ccccatccgc cgttccggcg gaggtatcct ttcacttctt ttttgccggg
     1501 aggacgtccc cacaccgctt gcagacgcgg cttcgtttcc cgtcaccgtc caccgccatc
     1561 gcgatccggg tcggcttgtt gcacttgtcg cacatgatga gaaggttgga gtaggcgagc
     1621 ggcgcttcct tctccacgat cccgccttgg ggagtcgtct tcccgggctt cgtgtgccgc
     1681 ttcaccaggt tgagcttctc gacgaagacc ctccccttct cgcggtcgat cttgagaacc
     1741 cggccgacct tccccttctc ccgacccgag atcaccttga cgatgtcgtt cttgcggatc
     1801 tgcgttttat ttccggtttc cattccgccc ctccggctca caggacttcc ggcgccagtg
     1861 agatgatctt catgtacttc ctggcgcgca gctcgcgggc gacgggcccg aagatgcggg
     1921 tcccgatcgg ctcgccttgc ggattgacga gtacggcgga gttctggtcg aagcgaagga
     1981 aactaccgtc ggcacgtccg atctccttca cggtgcggac gacgaccgc
//
LOCUS       DATGYW010000113         1630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_63746, whole genome shotgun sequence.
ACCESSION   DATGYW010000113 DATGYW010000000
VERSION     DATGYW010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1630
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63746"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..913)
                     /gene="recA"
                     /locus_tag="VK429_01520"
     CDS             complement(<1..913)
                     /gene="recA"
                     /locus_tag="VK429_01520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010940821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HLN90521.1"
                     /translation="MSQDAGRRKALDMAVAAIEKNYGKGAIMRLGADAPVENVPVIST
                     GAISLDAALGIGGIPRGRVTEIFGPESSGKTTLALHIIAEAQRTGGIAGFVDAEHALD
                     LAYARRLGISTEDLLISQPDTGEQALEIAEMLVRSGALDVLVVDSVAALVPKAEIEGE
                     MGDAHMGLQARLMSQALRKLTGTISKSRTAIIFINQIRQKIGVMFGNPETTTGGNALK
                     FYATVRLDIRRIAQIKKDDSVIGGRTRVKVVKNKVAPPFREAEFDILYGEGISRHGEI
                     IELGVLQNIIEKSGSWYAYKGERIGQGK"
     gene            complement(910..1506)
                     /gene="thpR"
                     /locus_tag="VK429_01525"
     CDS             complement(910..1506)
                     /gene="thpR"
                     /locus_tag="VK429_01525"
                     /inference="COORDINATES: protein motif:HMM:TIGR02258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HLN90522.1"
                     /translation="MRAFLGIGLPADVRETIVSAIAQVRALHAPVAWTAPQNLHITLF
                     FLGEISPERAALVERSMQVVASGIEPFSLTPEGGGAFPGTRNPRILWVGFLEPLELVR
                     QLQQNMESALSEAGFPREDRPFHPHITVGRSRGALPPAWGERFVQALAGKRFGVVPVS
                     SFTLYESRPESGGAVYTPVCDFRLERSAKREIREEKEP"
BASE COUNT          257 a          566 c          517 g          290 t
ORIGIN      
        1 ccttgccctg gccgatgcgc tcgcccttgt acgcgtacca cgagccggac ttctcgatga
       61 tgttctgcaa cacgcccagc tcgatgatct cgccgtggcg cgagatgccc tcgccgtaca
      121 ggatgtcgaa ctcggcttcg cggaacggcg gcgccacctt gttcttgacc accttgaccc
      181 gcgtgcggcc gccgatcacg gagtcgtcct tcttgatctg ggcgatccgg cgtatatcga
      241 gccgaacggt cgcatagaac ttgagcgcgt tccccccggt cgtggtctcg gggttgccga
      301 acatgacccc gatcttctgc cggatctggt tgataaagat gatcgccgtc cgggacttgc
      361 tgatcgtccc ggtgagtttc cgcagcgcct gggacatgag gcgcgcctgg agccccatgt
      421 gggcgtcccc catctccccc tcgatctccg ccttcggaac cagcgcggcg acggagtcga
      481 ccaccaggac gtcgagcgcg ccgctgcgga ccagcatttc cgcgatctcg agggcctgct
      541 cccccgtgtc gggctgggag atcaggaggt cttccgtgga gatcccaagc ctcctcgcat
      601 aagcgaggtc gagggcgtgc tccgcgtcga cgaacccggc gatccccccc gtgcgctgcg
      661 cctcggcgat gatgtggagt gcgagcgtgg tcttgccgga cgattccggt ccgaagatct
      721 ccgtgacgcg gccccgcggg attccgccga tgccgagcgc ggcgtcgagg gagatcgcgc
      781 cggtggagat gacggggacg ttctcgacgg gggcgtccgc ccccagccgc atgatggccc
      841 ccttgccgta atttttctcg atcgccgcga cggccatgtc gagcgccttg cggcggcctg
      901 catcctggct catggttcct tctcctctcg tatttcccgc ttggcggagc gttcgaggcg
      961 gaaatcgcac accggcgtat agaccgcccc ccccgattcc gggcggcttt cgtacaacgt
     1021 gaaggacgac acgggaacaa cgccgaatct tttcccggca agcgcctgga caaaccgctc
     1081 tccccacgct ggagggagcg ccccgcggct acgccctacc gtgatgtgcg ggtggaacgg
     1141 acggtcctcc cggggaaacc cggcctccga gagggcgctt tccatattct gttgcaactg
     1201 ccttaccaat tcaagcggtt cgagaaaacc gacccagagg attcgcgggt tcctcgtgcc
     1261 ggggaacgct ccccctcctt ccggcgtcag ggagaacggc tcgatcccgg aggccacgac
     1321 ctgcatcgac cgctcaacga gcgccgcccg ttccggtgaa atttccccaa ggaaaaacag
     1381 ggtgatgtgc agattttgcg gcgccgtcca cgcgacgggg gcgtggaggg cccgcacctg
     1441 cgcgatcgcc gacacgatgg tctccctgac gtcggcggga agaccgatgc cgaggaacgc
     1501 tctcatgccc cctcctccgc ttcggatcgc agaacgtcga tggcggcgcg aagcgaggcc
     1561 ctgacggtct cccggcggac cgcctcgcgg cctccgggaa accggaaccg gtgcgcatac
     1621 cggaccccgc
//
LOCUS       DATGYW010000114         2851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_117183, whole genome shotgun sequence.
ACCESSION   DATGYW010000114 DATGYW010000000
VERSION     DATGYW010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117183"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /gene="tuf"
                     /locus_tag="VK429_01530"
     CDS             <1..247
                     /gene="tuf"
                     /locus_tag="VK429_01530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006420927.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HLN90523.1"
                     /translation="KEEGGRHTPFFNGYRPQFYFRTTDVTGVGTLPEGVEMVMPGDNI
                     QMSVELITPVAMEKELRFAIREGGRTVGAGVVSEIIE"
     gene            263..412
                     /gene="rpmG"
                     /locus_tag="VK429_01535"
     CDS             263..412
                     /gene="rpmG"
                     /locus_tag="VK429_01535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012648707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HLN90524.1"
                     /translation="MRDIITLACVDCKNRNYTTTKNKKTTPDKLELKKFCSTCRKHTA
                     HKETK"
     gene            438..514
                     /locus_tag="VK429_01540"
     tRNA            438..514
                     /locus_tag="VK429_01540"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:472..474,aa:Trp,seq:cca)
     gene            545..826
                     /gene="secE"
                     /locus_tag="VK429_01545"
     CDS             545..826
                     /gene="secE"
                     /locus_tag="VK429_01545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011416200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HLN90525.1"
                     /translation="MAKTIKDRLLERLPGTRTATDEGRGAAAPVGLVPRVTGFYQEWI
                     TEMKKVTWPGRKDTLSSTAVVIVTVLIIVAFLGLVDFALGRITQSILSF"
     gene            844..1371
                     /gene="nusG"
                     /locus_tag="VK429_01550"
     CDS             844..1371
                     /gene="nusG"
                     /locus_tag="VK429_01550"
                     /inference="COORDINATES: protein motif:HMM:TIGR00922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HLN90526.1"
                     /translation="MPKQWFVVHTYSGYEKKVRESLLNRIVTEGMQERFGDVLIPAET
                     VVEMKNGKKKTGTRSFFPGYLLVNMDLDEETWHLVRHTPKVTGFVGGQHPAPIPEPDV
                     EDIKSQMVEGRLKPKPKITFTEGESVRVIDGPFATFTGVVDSVKPDKGKVVVLVSIFG
                     RATPVELDFTQVEKG"
     gene            1399..1821
                     /gene="rplK"
                     /locus_tag="VK429_01555"
     CDS             1399..1821
                     /gene="rplK"
                     /locus_tag="VK429_01555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009108922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HLN90527.1"
                     /translation="MAKKVVAQIKLQIVAGKANPSPPVGPALGQHGVNIMEFCKAFNA
                     KTASQEGMVIPVVITVFADRSFTFITKTPPASVLLLKAAGLEKGSKTPKKEKCGKITR
                     DKVEEIAKLKLVDLDVKDLAAAVKTVEGTARSMGLDVV"
     gene            1888..2589
                     /gene="rplA"
                     /locus_tag="VK429_01560"
     CDS             1888..2589
                     /gene="rplA"
                     /locus_tag="VK429_01560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013779202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HLN90528.1"
                     /translation="MPRQGKKYLEARGKVNREAKYSLDEALDLLKETARAKFDETVEV
                     AMRLGVDPKYPDQQVRGSVVLPHGTGKSVRVLVFAKGEKVKEAEDAGADFVGSDDLLA
                     KIQGGWLDFDKAVATPDMMGGVGRIGKLLGPRGLMPNPKVGTVTFDVARAVRDLKGGK
                     VEFRVDKTATLHAGIGKASFGKEKLRENFLAFFEAIMKAKPSGAKGMYIRTLSLSTTM
                     GPGIRMNFNALLTEK"
BASE COUNT          626 a          803 c          986 g          436 t
ORIGIN      
        1 gaaggaggag ggcggtcgtc acacgccgtt tttcaacggg taccgtccgc agttctactt
       61 ccggacgacg gacgtgacgg gcgtggggac gcttcccgag ggcgtggaga tggtgatgcc
      121 cggggacaac atccagatgt ctgtcgagct gatcacaccg gtggcgatgg agaaggagct
      181 tcggttcgcg atccgcgagg gcggacggac cgtgggcgcc ggcgtcgtct cggaaatcat
      241 cgagtagggg aagggaacgg cgatgcggga catcatcacg ctggcgtgcg tcgactgcaa
      301 gaaccggaac tacacgacca cgaagaacaa gaagaccacg cccgacaaac tcgagttgaa
      361 gaagttctgc tccacgtgcc gcaagcacac ggcgcacaag gagaccaagt agaacaggta
      421 gaaggggcgg ggagcgaagg ccagtagctc taacggctag agcagcggac tccaaatccg
      481 cgggttgggg gttcgaatcc ctcctggcct gccacttttc tccgaagacg ggagcgtttc
      541 gatcatggcg aagacgatca aggacaggtt gctggagcgg ttgcccggca cccgcaccgc
      601 caccgacgag ggcaggggtg cggcggctcc ggtgggcctg gtcccccgtg taaccggttt
      661 ttaccaggag tggatcaccg agatgaagaa agtcacctgg ccagggcgga aggacaccct
      721 ctcctccacg gccgtggtca tcgtgacggt cctgatcatc gtggcgtttc ttggcctggt
      781 ggacttcgcc ctcggacgaa tcacccagtc gatcctgagt ttctgaacca ccaagaggaa
      841 gcgatgccga aacagtggtt cgtcgttcat acctattcag ggtatgagaa gaaggtcagg
      901 gaatccctgc tgaaccggat cgtcacggaa gggatgcagg aacgcttcgg cgacgtcctg
      961 atcccggccg aaacggtcgt ggagatgaaa aacggtaaga agaagaccgg gacccggtcc
     1021 ttcttccccg gataccttct cgtcaacatg gacctcgacg aggagacctg gcacctcgtg
     1081 cggcacaccc cgaaggtcac cggtttcgtc ggaggccagc acccggcccc catccccgag
     1141 cccgacgtcg aggacatcaa gtcccagatg gtcgagggcc gcctgaagcc gaagccgaag
     1201 atcaccttca ctgaggggga gagcgttcgg gtgatcgacg gccccttcgc gactttcacc
     1261 ggcgtcgtgg acagcgtcaa gcccgacaag gggaaggtcg tcgtcctcgt ctccatcttc
     1321 ggacgcgcca ccccggtgga gctcgatttc acacaggtcg aaaaaggata agcgcggcag
     1381 gagggaaaag gagaagccat ggcgaaaaaa gtcgttgccc agatcaagct gcagatcgtg
     1441 gccgggaagg cgaacccgtc gccccccgtg gggcccgcgc tcgggcagca cggcgtgaac
     1501 atcatggagt tctgcaaggc gttcaacgcg aagacggcgt cccaggaggg gatggtgatc
     1561 cccgtggtga tcaccgtgtt cgcggaccgg tcgttcacct tcatcacaaa gaccccgccg
     1621 gcgtcggtcc tgctgctcaa ggccgcgggg ctcgagaagg ggagcaagac cccgaaaaag
     1681 gagaagtgcg ggaagatcac ccgggacaag gtcgaggaga tcgcgaagct gaagctggtc
     1741 gacctcgacg tgaaggacct cgccgccgcg gtcaagacgg tcgaggggac ggcgcgcagc
     1801 atggggctcg acgtcgtctg acgcgaaacg caacacaacg tggaagtcgc ccccggcgcg
     1861 atccgcgggg cgggaaggga gggggaaatg ccgcggcaag ggaaaaaata cctggaagca
     1921 cggggcaagg tgaacaggga ggcaaagtac tctctcgacg aagcgctgga ccttctgaag
     1981 gagacggccc gggcgaaatt cgacgagacg gtggaggtcg cgatgcggct gggggtcgat
     2041 ccgaagtatc cggaccagca ggtccggggc tcggtggtgc tcccccacgg gacgggaaag
     2101 agcgtgcgcg tcctcgtgtt cgccaagggc gaaaaggtca aggaggcgga ggacgccggc
     2161 gccgacttcg tcggaagcga cgatcttctg gcgaagatcc agggcgggtg gctcgatttc
     2221 gacaaggcgg tcgccacgcc cgacatgatg gggggggtcg gccggatcgg gaagctgctc
     2281 ggaccccgcg gactgatgcc gaacccgaaa gtcgggaccg tcaccttcga cgtggcgagg
     2341 gcggtgcggg acctgaaggg cgggaaggtc gagttccggg tcgacaagac cgcgacgctc
     2401 catgccggaa tcggcaaggc cagtttcggg aaagagaagc tccgcgagaa tttcctcgcc
     2461 ttcttcgagg cgatcatgaa ggcgaagccg tcgggggcca aggggatgta catccggacc
     2521 ctttcgctct ccacgacgat gggtcccggg atacggatga atttcaacgc gctgctcacg
     2581 gagaagtgac cgctctttgc acgcacggga aacttccttt gccaaagacc gcgggttcgc
     2641 ctcgaggcga ccaagggggt cgaagggatc gttccttcgc ccgtcccgcg cagacaaggg
     2701 gagccggtcg aacgggatgt cctcctttcg cgccgcgccc tctttctttg acgggggttt
     2761 cgtcatagag tccaaaactt tcgaaaggga aagggggaaa cggacgcggt gaaaaaaaac
     2821 gaaaaggcgg aaacggtcga agcgttgaag g
//
LOCUS       DATGYW010000115         2239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_384331, whole genome shotgun sequence.
ACCESSION   DATGYW010000115 DATGYW010000000
VERSION     DATGYW010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2239
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384331"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..460
                     /locus_tag="VK429_01565"
     CDS             <1..460
                     /locus_tag="VK429_01565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90529.1"
                     /translation="MADRPAGEIDTVEITTTTPDVLLREALDGAVDLSLAIRRDAVTT
                     LSSLRAGDLTTAGPRYAACIESLGTFFQLAGAVFNAIGTGVFPLAARSGSASDLPSPP
                     DETAGILQRLLQTQKGNDWNAVADILEREILPNIDGWSAFFKALKEIGAE"
     gene            466..837
                     /locus_tag="VK429_01570"
     CDS             466..837
                     /locus_tag="VK429_01570"
                     /inference="COORDINATES: protein motif:HMM:NF018021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase family protein"
                     /protein_id="HLN90530.1"
                     /translation="MERQDDFDRALRMALSELPQMFRDALANVAVVVEEWAPDDLLDE
                     LGVPSDDTLYGFYHGVPLPERSVQDSGLLPDKISVYRGPLVEDFPDRRELCRQIRITL
                     LHEIGHYFGMDEEELSRLGYK"
     gene            884..1831
                     /locus_tag="VK429_01575"
     CDS             884..1831
                     /locus_tag="VK429_01575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90531.1"
                     /translation="MLLLRREYRDSAEPPEIVLLHAEVTLHGVSSGPTRRFTRAVVPL
                     DAHGRRVAHLPLPEPGEGKRILVRYRFSTVRGREEGFSPWYEVTIPSDDAIADLYHIP
                     EEGTGNLPPAPGLGHFRLVLPLGEGERASGTFRFGFGAMRKKPSPSLCRAAIDAGNGP
                     APLIEAPEALSVLKNRPMPYFLYHVSGDGKLRADKIACARITLPDPDGNVVSARMVWG
                     DSAWRATNFSLMEAKGYAPGPGAAAEEFFAEDRAAFLGAREAALSLLPVPRVFEAFVY
                     GPSGSGVEYCFQTVSRRPDGGFAVRWRNRESGGNWVVTL"
     gene            complement(1841..>2239)
                     /locus_tag="VK429_01580"
     CDS             complement(1841..>2239)
                     /locus_tag="VK429_01580"
                     /inference="COORDINATES: protein motif:HMM:NF012382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLN90532.1"
                     /translation="RIGLGFAHPRIVEGLNKVRDSYNLSRLSIVAGAAALADVGWMER
                     NAARIRKTREALAAALPGVGFTPFPSRSNFILARRTRGGSARPVYEALKRRKILVRHF
                     DTPRLAGCLRITVGTDDEVGALLDALKILR"
BASE COUNT          329 a          766 c          777 g          367 t
ORIGIN      
        1 gatggccgac cgcccggccg gtgagatcga cacggtggag atcacgacga cgacccccga
       61 cgtcctgctc cgggaggctc tcgacggcgc cgtcgacctc tccctcgcca tccgccgcga
      121 cgccgtgacg accctgtcgt ccctgcgcgc gggggacctc acgacggcgg gtccccggta
      181 cgcggcctgc atcgagtccc tcgggacgtt cttccagctg gccggggcgg tcttcaacgc
      241 catcgggacc ggtgtgttcc cgctcgccgc ccgttccggg agcgcgtcgg atcttccgtc
      301 cccccccgat gagacggccg gaatcctgca gcgcctgctc cagacgcaga aggggaacga
      361 ctggaacgcc gtggcggaca ttctcgagcg ggagatcctg cccaatatcg acgggtggtc
      421 cgcctttttc aaggcgctga aggagatcgg agcggagtag ggggaatgga gcggcaagac
      481 gatttcgacc gggcgctccg gatggcgctc tcggaactcc cgcagatgtt ccgcgacgcg
      541 ctggcgaacg tcgcggtggt cgtggaggag tgggcgccgg acgatctgct cgacgagctg
      601 ggtgtcccgt cggacgacac gctgtacggc ttctaccacg gtgtgccgct ccccgagcgg
      661 tcggtccagg attccggcct tcttcccgac aagatctccg tctaccgggg gccgctcgtc
      721 gaggattttc cggaccggcg ggagctgtgc cgacagatcc ggatcacgct gcttcacgag
      781 atcggccact acttcgggat ggacgaggag gaactctccc gcctcggata caaatgaggc
      841 ctcctccagg ctgatcccaa gacgctgcac caggaggttc ggaatgctcc ttcttcgacg
      901 agagtaccgt gacagcgccg aaccgccgga gatcgtgctg ctgcacgccg aggtgacgct
      961 gcacggggtc tcctccggcc cgacgcggcg gttcacccgg gcggtcgtcc ccttggacgc
     1021 gcacggccgc cgggtggcgc accttccgct ccccgagccg ggggagggga agcggatcct
     1081 cgtgcgatac cgtttttcca ccgttcgcgg cagggaagag ggtttctctc cgtggtacga
     1141 ggtgacgatt ccctcggacg atgcgatcgc ggatctctac cacatccccg aggaggggac
     1201 ggggaacctt ccccccgctc cggggctcgg acatttccgc ctggtcctgc cgctggggga
     1261 aggggagcgc gcatccggca ccttccggtt cggtttcggc gcgatgcgga aaaagccgtc
     1321 cccgtcgctt tgccgcgccg ccatcgacgc gggaaacggg ccggcgccgc tgatcgaagc
     1381 cccggaagcc ctctcggtcc tcaagaaccg gccgatgccg tactttctgt accacgtctc
     1441 gggggacgga aaactgcgcg ccgacaagat cgcgtgcgcc cgcatcaccc tccccgatcc
     1501 cgacgggaac gtcgtctccg cccggatggt ctggggcgac tccgcgtggc gggccacgaa
     1561 cttctccctc atggaggcca aggggtacgc gcccggaccc ggagcggcgg ccgaggagtt
     1621 tttcgcggaa gaccgggcgg cgtttctcgg cgcgagggag gccgcccttt cgctcctgcc
     1681 ggttcctcgc gtcttcgagg cgttcgtgta cgggccttcg gggagcgggg tggagtattg
     1741 cttccagacc gtctcgcggc ggccggacgg gggcttcgcg gtgcgatggc ggaaccggga
     1801 aagcggtggg aactgggtcg tgaccctgtg acgaggcggt tcagcggagg attttcagcg
     1861 cgtccaggag cgccccgacc tcgtcgtccg tcccgacggt gatgcggagg caccccgcga
     1921 gccgcggggt gtcgaagtgc cgcacgagga tcttccggcg cttgagcgcc tcgtagaccg
     1981 gccgggccga tcctccccgc gtgcgccggg cgaggatgaa gttgctccgc gacggaaacg
     2041 gcgtgaaccc gactccggga agggccgccg ccagggcctc gcgggttttc cggatcctcg
     2101 ccgcgttccg ttccatccac ccgacgtccg cgagcgcggc cgctcccgcc acgatcgaca
     2161 agcggctcag attgtacgag tcgcgcacct tgttcagacc ctcgacgatc cgcgggtggg
     2221 cgaacccgag cccgatccg
//
LOCUS       DATGYW010000116         2336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_64241, whole genome shotgun sequence.
ACCESSION   DATGYW010000116 DATGYW010000000
VERSION     DATGYW010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2336
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64241"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1695)
                     /locus_tag="VK429_01585"
     CDS             complement(<1..1695)
                     /locus_tag="VK429_01585"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF028500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HLN90533.1"
                     /translation="MADTKQAHPIQYVKGVGPRLGEKLAARGIRTPHDALYFFPKDYE
                     DRRKVVPIRELKAGMTVPVRGKILSVHGGGKGFRPHRVLDVVIGDGSGRLSAKWFRFH
                     PSLAERFRVGEPVTLCGTARWFRFFPEMHHPEILAEEDAADPVHSGRIVPVYPEVEGV
                     PPRVLRKIQWEVVQRHSSLEIECFPAGILARVGVPPLQESLASIHFPHDDADAERFRA
                     FSSPQQRRLIFGELFALQWELALRRAGTEREDAIPLPWDREIVDEIKRRLPFDLTGAQ
                     RRVVNEILKDLGKPHPMHRLLQGDVGSGKTIVAWIAAMVAWRHGVQAAVMAPTEILAE
                     QHYRRFLEQSAGLPVRVALLSAALPPREREAVRKRIQEGEADIVVGTHALIQESVAFR
                     NLALGIIDEQHRFGVLQRASLRRKGKIAPHLLVMTATPIPRTLAITLYGDLDVSVLDE
                     MPRGRVPVRTKVVTEDGRRKVFEEIRSEIARGGRAYVVLPLVEESEKIALRDATRTAE
                     RLREAFPGVGVGLLHGRMKASEKEETMRRFKDGDLQLLVSTTVVEVGVDVPEATVMV"
     gene            complement(1700..2266)
                     /locus_tag="VK429_01590"
     CDS             complement(1700..2266)
                     /locus_tag="VK429_01590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90534.1"
                     /translation="MGVDKYTGKKGTGYGVDYSFKVKRIRERVGSNKKEAAEYLGKKM
                     KEIRDGQFREGPERGVLFDELIADYEKQAEAKKIYHNERYYIDTLQEHFTGRVITELT
                     VLDIGRFRTQRKESPTKAKKIRGGATVNREIACLRGMLNKAVKWELIPKNPASPEWKV
                     WQKALTNLEGAEKANSSIEAQSIGIAGA"
BASE COUNT          383 a          778 c          693 g          482 t
ORIGIN      
        1 gaccatcacc gtggcctccg ggacgtccac acccacctct acgaccgtgg tggagacgag
       61 cagctgcagg tcgccgtcct tgaaccgcct cattgtctct tccttctcgg acgccttcat
      121 ccgaccgtgc agcagcccca cccccacgcc ggggaacgct tcccggagac gttcggcggt
      181 gcgcgtggcg tcccgaaggg cgattttttc cgactcctcc accaatggga ggacgacgta
      241 cgccctccct ccccgagcga tctcgctgcg gatctcctcg aagactttcc gccgaccgtc
      301 ctccgtgacg actttcgtgc ggaccggaac ccttccccga ggcatctcgt cgagcaccga
      361 aacgtcgagg tcgccgtaca gcgtgatcgc gagcgtccga ggaatcggcg tggcggtcat
      421 gacgaggagg tgcggggcga tctttccctt cctgcggagg gaagcgcgtt ggagcacccc
      481 gaacctgtgc tgctcgtcga taatcccaag tgcgagattg cggaacgcga cgctctcctg
      541 gatcagggcg tgcgtcccca cgacgatatc cgcctccccc tcctggatcc gttttcgcac
      601 cgcctcgcgc tccctcgggg gaagcgcggc ggagaggagc gcgacacgaa ccgggagtcc
      661 cgctgactgt tccaggaacc tccggtaatg ctgttccgcc aggatctccg tgggcgccat
      721 cacggcggcc tgcacgccgt gccgccacgc caccatcgcc gcgatccacg caacgatcgt
      781 ctttccgctg cccacgtccc cctggaggag ccggtgcatc gggtggggtt tcccgaggtc
      841 tttcaggatc tcgttgacga cgcgccgctg ggcgccggtc aggtcgaacg gaagccggcg
      901 cttgatctcg tcgacgatct cgcggtccca cggaagcgga atcgcatcct cccgctccgt
      961 tcccgctcgc cggagtgcaa gctcccattg cagggcgaac agttcgccga agatcaggcg
     1021 ccgctgctgg ggggaggaga atgcccgaaa ccgttccgca tcggcgtcgt cgtgcggaaa
     1081 gtggatggaa gcgagcgact cctggagggg gggtacgccg accctcgcga ggatgccggc
     1141 agggaaacac tcgatctcga gcgaagagtg ccgctggacc acctcccact ggatcttgcg
     1201 gaggacccgc ggcgggaccc cctccacctc cgggtagacg gggacgatcc ggccggaatg
     1261 gaccggatcg gccgcgtcct cctccgcgag gatctccggg tggtgcattt cggggaagaa
     1321 gcggaaccac cgcgctgttc cgcagagcgt caccggctcg ccaacgcgga accgttcggc
     1381 aagggaggga tggaaccgga accatttcgc ggagaggcgc ccggacccgt cgccgatcac
     1441 gacatcgagg acccggtgcg gacggaaccc ctttcctcct ccatgcacgg aaaggatctt
     1501 cccgcggacg ggtacggtca tccccgcctt gagttcccgg atgggaacca ccttgcgacg
     1561 gtcttcgtaa tccttcggga agaagtagag ggcgtcgtgg ggcgtccgga tcccccgggc
     1621 ggcaagcttc tcgccgaggc gggggcccac ccccttgacg tattggatgg gatgagcttg
     1681 ttttgtgtcg gccaccccgt tatgctcctg caattccaat ggattgcgct tcaatagaac
     1741 tatttgcctt ctccgctccc tccaaatttg tgagggcttt ttgccatact ttccactcag
     1801 gagacgcggg attcttcggg atcaactccc atttgacggc cttgttcagc attccccgga
     1861 ggcaagctat ctcccgatta acagtcgcgc cgccacggat tttcttggct ttcgtcggag
     1921 actccttccg ctgcgtcctg aatcgcccga tgtccaggac agtgagttcc gtgattaccc
     1981 tgccggtgaa gtgctcttgg agggtgtcga tataatacct ctcattgtgg tagatcttct
     2041 tggcctcggc ttgcttttcg taatcggcaa tcaattcatc gaagagtacc cccctctccg
     2101 ggccttcccg gaactggccg tcgcggatct ccttcatttt cttccctaga tactccgctg
     2161 cctccttctt gttcgacccc acccgctccc ggattcgttt gaccttgaag gagtaatcga
     2221 cgccgtagcc tgtacccttc ttgccggtgt acttgtcgac gcccatcacg ggtctccttt
     2281 actttttctt ggaaaaggat ttgacgttat ttgtttccgg tgtcccctcc gggggc
//
LOCUS       DATGYW010000117         1832 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_439055, whole genome shotgun sequence.
ACCESSION   DATGYW010000117 DATGYW010000000
VERSION     DATGYW010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_439055"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..665)
                     /locus_tag="VK429_01595"
     CDS             complement(<1..665)
                     /locus_tag="VK429_01595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006425289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN90535.1"
                     /translation="MLRVESVVKSFGGFKAVDGANLHVEAGEIVAVIGPNGAGKTTLF
                     HLLTGHLSPDSGRILFKGVEIGGLSPHVICRRGITRSFQVVNIFPRLSVFENVQIAVL
                     ARERKTFRIFSPVAGMAEEEVHRTLRSVGLFDQRDVESDLLSHGDKKVLEIAVALSGN
                     PELLILDEPTAGMAPEETERCIRLIRKLSEESGVTILFCEHDIALVFEIANRIMVMVR
                     GATV"
     gene            complement(658..1593)
                     /locus_tag="VK429_01600"
     CDS             complement(658..1593)
                     /locus_tag="VK429_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014811988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN90536.1"
                     /translation="MRRSAAPLFLLLLLATLLALPQFLPRFHTYVAAIVLLTALLATS
                     LNIAIGYTGLYQFGHAVFYGIGAYGTALTLTRSGMPAPVAFLAGPLAAAALSLAMGLV
                     CIRLSKLYFGMLQISLGSLVWAVVYRWYSFTGGDDGIHGIPLPDAIATPKGSYYCTLI
                     VTTLCVIAMHRIVRSPFGKVIQGIRDNPVRAAAIGVDVKLHQLASLVIAGFFGGVAGS
                     LFVIVENSVFPDMMFWTFSLEVLIMCLLGGMYTFFGPLVGASVIVLLRVFAGVHTQYW
                     SLILGTILTLVIIFLPDGVLGLFARRSLRKADRGA"
     gene            complement(1601..>1832)
                     /locus_tag="VK429_01605"
     CDS             complement(1601..>1832)
                     /locus_tag="VK429_01605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006425254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN90537.1"
                     /translation="VNISLGMDHSLIMETFLIVIIGGLGNMWGALLGSLIFGLTQSLG
                     ILVWPQFGIAFPYLAVVAVLVVRPRGLLRSTW"
BASE COUNT          378 a          585 c          612 g          257 t
ORIGIN      
        1 acggtcgccc cccgcaccat caccatgatc cggttcgcga tctcgaacac gagcgcgatg
       61 tcgtgctcgc agaagaggat cgtcaccccg gactcctcgg aaagcttccg gatcaggcgg
      121 atgcaccgct ccgtctcctc cggcgccatc cccgccgtcg gctcgtcgag gatgaggagt
      181 tccgggttcc cgctcagcgc gacggcgatc tcgaggacct tcttgtcccc gtgggagaga
      241 agatcgcttt cgacgtccct ctggtcgaac aggcccacgc tccggagggt ccggtggact
      301 tcctcctccg ccatccccgc aacaggcgaa aagatccgga acgtcttccg ttcccgcgcc
      361 aggaccgcga tctggacgtt ctcgaagacc gagagccgcg gaaagatgtt caccacctgg
      421 aaggagcggg tgatccccct ccggcagatg acgtgcgggg aaagtccgcc gatctccact
      481 cccttgaaga ggatccgccc cgaatcgggg gaaaggtgcc ccgtcagcag gtggaacagc
      541 gtcgtcttcc ccgcgccgtt cggcccgatg acggccacga tctctcccgc ctcgacatga
      601 aggttcgccc cgtcgaccgc cttgaagccg ccgaacgact tgacgaccga ttccacccta
      661 agcaccgcgg tccgccttcc gcagggaccg gcgggcgaag agaccgagca cgccgtcggg
      721 gaggaagatg atcacgagcg tcaggatcgt gcctaggatg agggaccagt actgggtgtg
      781 gacgccggcg aagacccgca ggagcacgat gacggaggcg ccgacgagcg gcccgaagaa
      841 cgtgtacatc cctcccagca ggcacatgat cagcacctcg agggagaacg tccagaacat
      901 catgtccgga aacaccgagt tttccacgat gacgaacagc gacccggcca cgccgccgaa
      961 aaacccggcg atcacgaggg acgccagctg gtgcaatttc acatccacgc cgatcgctgc
     1021 cgcccggacg ggattgtcac ggatcccctg gatcaccttg ccgaaggggg aacggacgat
     1081 ccggtgcatc gcgatgacgc agagcgttgt cacgatcagg gtgcagtagt aggacccttt
     1141 cggagtggcg atcgcgtcgg ggagcggaat cccgtggatc ccgtcgtcgc ctcccgtgaa
     1201 ggagtaccag cggtagacga cggcccagac gagggaaccg agggagatct ggagcatccc
     1261 gaagtagagt ttcgaaagcc ggatgcagac caggcccatc gcgaggctca aggccgcggc
     1321 ggcgagcggt ccggcgagga acgcgaccgg ggccggcatc ccgctccgcg tcagcgtcag
     1381 ggccgtaccg taggcgccga tcccgtagaa gacggcgtga ccgaactggt agaggccggt
     1441 gtagccgatg gcgatgttga ggctcgtcgc gagcagggcg gtgagcagga cgatcgccgc
     1501 gacgtaggtg tgaaaccggg ggaggaactg cggcagggcc agaagcgtgg ccagcaggag
     1561 gagcaggaag agcggcgcgg ccgatcgcct catcggcccg tcaccacgtc gacctcagga
     1621 gccctctcgg ccggacgacg aggacggcga cgacggcgag gtagggaaac gcgatcccga
     1681 actgcggcca gacgaggatt ccgagggatt gcgtgagccc gaagatgagg gaaccgagga
     1741 gggctcccca catgttcccg agaccgccga tgatgacgat gaggaacgtc tccatgatca
     1801 gcgaatgatc catcccgagc gagatgttga cc
//
LOCUS       DATGYW010000118         2730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_331034, whole genome shotgun sequence.
ACCESSION   DATGYW010000118 DATGYW010000000
VERSION     DATGYW010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2730
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331034"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..889
                     /locus_tag="VK429_01610"
     CDS             <1..889
                     /locus_tag="VK429_01610"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN90538.1"
                     /translation="LPFLKFQRATDYIIFCVFVLSFDLIYGYMGRLSFGHMLFLGAGA
                     YGATLFAEHVSPNPFLSLLFAIAAAAAVGALLGPIVVRTTGAAFALINLAFNQVGHFL
                     VLIAFARYTGGEDGMSAVFSKVGFLDFQDKRVMFGFCLACLLLTCWGMKRLTTSPFGI
                     LLRMIKENETRVKFLGYDTFRYKWAAYALSAGVAGFSGALSILNYGYVTPSFIDTNRN
                     VEVIFASLIGGAGSIYGSLAGGVVFMAISNYLPTYIPRWEMFLGFGLLLLVFRFRTGI
                     WGALSALDVFRPRREGEGG"
     gene            886..1719
                     /locus_tag="VK429_01615"
     CDS             886..1719
                     /locus_tag="VK429_01615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017873979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN90539.1"
                     /translation="MITTLVYGFTIGGILYILSIGLSLTFGSMRIVNFAHALVYTTGA
                     YFLVVALRTLGLGFLPAAAVATAAVLPIAAAIERFIIRRLYGESLDYAIIATYAVLLI
                     GVDLIKWGFGATPIPLSDPIGRDVGLFGISFPLYRLLIIALAISIHGTLYLFFKRTIV
                     GKIVVAGLEDKDAVRSLGIDVDRYFAIVFLVGSGLAALGGVLYAPITSVHPYMGFQVL
                     LICFAVVIVGGMGSLHGTFLASFALGMVIAITGRYWGPAAETMVYAVMAVVLIFKPLD
                     V"
     gene            1803..2318
                     /gene="tpx"
                     /locus_tag="VK429_01620"
     CDS             1803..2318
                     /gene="tpx"
                     /locus_tag="VK429_01620"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004512772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0016684 - oxidoreductase activity, acting
                     on peroxide as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HLN90540.1"
                     /translation="MQERKGVITFKGNPMTLLGPEIKAGDKAPDFRVVDTGLAPVTLA
                     DFRGKVKIISAVPSLDTPTCDTETRRFNQEAAKLPGNVVVLTVSLDLPFAQKRWCAAA
                     GIDKVKTLSDYQDRSFASAYGVLIKELKLLSRSIFVVDGSDKVRYVQHVKEVSQEPDY
                     AAVLAAARDLQ"
     gene            2364..>2730
                     /locus_tag="VK429_01625"
     CDS             2364..>2730
                     /locus_tag="VK429_01625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015589911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HLN90541.1"
                     /translation="MTPYATGVFYHPSFSRRSYLTVGARLADFPMALGGVLQSGRVAL
                     YEPGPVSRELVMKIHTPGLIEGVKGDPLCSTAWHSAGGMVMAGEKIAGGEIGNAFAFI
                     GAGGHHSGRDFFGGYCCFND"
BASE COUNT          404 a          883 c          896 g          547 t
ORIGIN      
        1 cctcccgttc ctcaagttcc agcgggcgac cgattacatc atcttctgcg ttttcgtgct
       61 ctccttcgac ctcatctacg gctacatggg ccgcctttcg ttcgggcaca tgctgttcct
      121 gggcgcgggc gcctacggcg cgacgctgtt cgcggagcac gtctcgccga acccgttcct
      181 ctccctcctg ttcgcgatcg ccgccgccgc cgcggtcggg gcgctgctgg gaccgatcgt
      241 cgtccggacg acgggcgcgg cgttcgcgct catcaacctg gcgttcaacc aggtcgggca
      301 tttcctcgtt ctgatcgcct tcgcccggta caccgggggg gaggacggca tgtcggccgt
      361 cttctcgaag gtcgggttcc tcgacttcca ggacaagcgg gtgatgttcg gcttctgcct
      421 ggcctgtctc ctcctcacgt gctgggggat gaagcggctc accacgtccc cgttcggcat
      481 cctgctgcgg atgatcaagg agaacgagac gcgcgtcaaa ttcctcgggt acgacacctt
      541 ccggtacaag tgggccgcct acgcgctttc cgcgggcgtc gccgggttct ccggcgcgct
      601 gtcgatcctg aactacgggt acgtcacacc cagcttcatc gacacgaacc ggaacgtgga
      661 ggtgatcttc gcgtcgctta tcggcggtgc ggggagcatc tacggctccc tggcgggagg
      721 ggtggtgttc atggcgatca gcaactacct gcccacgtac atcccccggt gggagatgtt
      781 cctcggcttc ggcctgcttc ttctcgtgtt ccggttccgg acgggtatct ggggggcgtt
      841 gtccgccctc gatgtgttcc gcccccgccg ggagggggag ggcggatgat caccacgctg
      901 gtctacgggt tcacgatcgg ggggatcctg tacatcctct ccatcgggct gtcgctgacg
      961 ttcggatcca tgcggatcgt gaacttcgcc cacgcgctgg tctacaccac cggcgcctat
     1021 ttccttgtcg tcgccctgcg gaccctcggc ctcggcttcc tgccggcggc cgcggtcgcg
     1081 acggccgcgg tccttcccat cgccgcggcg atcgagcggt tcatcatccg gaggctctac
     1141 ggggagtcgc tggactacgc gatcatcgcc acgtacgccg tcctcctgat cggggtggac
     1201 ctcatcaagt ggggcttcgg ggcgacgccc atcccgctct cggatccgat cggcagggac
     1261 gtgggcctgt tcggcatctc ctttcccctc tatcgcctgc tgatcatcgc gctggcgatc
     1321 tcgatccacg gcactctcta tcttttcttc aagcggacga tcgtggggaa gatcgtggtg
     1381 gcggggctgg aggacaagga cgcggtgcgc agcctcggca tcgacgtcga ccggtacttc
     1441 gcgatcgtct ttctcgtcgg cagcggcctg gcggcgctcg gcggggtcct ttacgctccg
     1501 atcacctctg tccacccgta catgggcttc caggtcctgc tgatctgctt cgctgtcgtc
     1561 atcgtggggg ggatgggcag cctccacggg acgttcctcg cctccttcgc ccttgggatg
     1621 gtgatcgcca tcacagggag atattggggg cccgcggccg aaacgatggt ctatgccgta
     1681 atggccgtgg tactcatctt taaaccgctc gacgtctgac cgttcgccgg aaaccttctt
     1741 tcccggcgcg cgtcaaaatc gtgaaggccg ggacacattc ttccacggaa aaggagtcca
     1801 ccatgcagga gcgcaaggga gtgatcacgt tcaagggaaa tccgatgacc ctcctcgggc
     1861 ccgagatcaa ggcgggggac aaggcccccg acttccgggt cgtggacacg gggctggcgc
     1921 cggtcacgct cgcggatttc agggggaagg tcaagatcat cagcgccgtg ccgtccctcg
     1981 acacgccgac gtgcgacacg gagacgcggc ggttcaacca ggaggcggcg aagctcccgg
     2041 ggaacgtcgt cgtcctcacg gtcagcctcg acctcccctt cgcccagaaa cggtggtgcg
     2101 cggcggccgg gatcgacaag gtgaagaccc tctcggacta ccaggaccgc tccttcgcct
     2161 ccgcctacgg ggtgctcatc aaggagctga agcttctctc gcgatcgatc ttcgtcgtcg
     2221 acgggagcga caaggtgcgg tacgtccagc atgtgaagga ggtgtcccag gagccggact
     2281 atgccgcggt ccttgcggcg gcgcgggatc tccagtagga gggaaagcgg gatccgccgg
     2341 gaacgaccgg aaagggtaga tcggtgaccc catacgccac cggcgtcttc tatcaccctt
     2401 ccttttcccg gcgcagctac ctgacggtcg gagcgcggct ggccgatttt ccgatggcgc
     2461 tgggcggggt cctgcaaagc ggccgggtcg cgctttacga gccggggccc gtttcgcgag
     2521 aattggtgat gaagatccac accccggggt tgatcgaagg ggtgaagggg gatccgctct
     2581 gctccaccgc ctggcattcg gcgggcggca tggtgatggc gggggagaag atcgccgggg
     2641 gggagatcgg caacgccttc gccttcatcg gcgcgggggg acaccactcc gggcgggact
     2701 tcttcggggg atattgctgc ttcaacgacg
//
LOCUS       DATGYW010000119         1575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_331069, whole genome shotgun sequence.
ACCESSION   DATGYW010000119 DATGYW010000000
VERSION     DATGYW010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1575
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331069"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1575)
                     /gene="glyS"
                     /locus_tag="VK429_01630"
     CDS             complement(<1..>1575)
                     /gene="glyS"
                     /locus_tag="VK429_01630"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00211.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HLN90542.1"
                     /translation="FAKSQGIDVSALSVFPTDRGDYLGFVREEAARPVQEILPKIASD
                     FLPAIPFKKSMRWADLDVKFARPVHWIVSLYGDEVLPFSFGNIASGRTTFGHRFLAPG
                     AIELPSTSEYPGRLAEARVLVDLEDRKGRIRAGIREAEQRIGMKWVEDEPLVETVANL
                     VEYPVVLLGRFEEKYLSLPREVLVTSMRNNQKYFVFEDAKGGLFPGFAFVSNMIVPDP
                     SVVVAGNERVLRARLSDAEFYYGDDLKKPLFERTEALKKVLFQADMGTYWEKVERMAD
                     IAEFVAAFGFPAKAKDCRRAAFLSKADLTTGVIKEFPELQGVMGRHYASKTGESVEVA
                     QSVFEHYLPKGQSDDLPTTDVGAATAIADKIDMVCGCFGVGLIPTGTADPYGLRRHTL
                     GILTILESRGLRIPIAELVDRSLATLAPKLTSPAAEVRRKVLEFVVARYLNLMVSQGA
                     PADLVEAVLAPGLTNVVDLRAKLDALVAFRADAAFEPLAEVFKRAINITKAYDGPLAV
                     SGKLFEHDEERALHAAA"
BASE COUNT          269 a          540 c          507 g          259 t
ORIGIN      
        1 cgcagcggcg tggagcgccc gctcctcgtc gtgctcgaaa agcttccccg agaccgcgag
       61 gggaccgtcg tatgccttgg tgatgttgat cgcgcgcttg aagacctccg cgagcggctc
      121 gaacgcggcg tccgcccgga aggcgaccag cgcgtcgagt ttcgcccgaa ggtccaccac
      181 gttcgtaagc cccggggcca gcaccgcctc gacgaggtcg gccggcgccc cctgggacac
      241 catgaggttc aggtagcggg cgacgacgaa ttcgaggacc ttcctcctca cctcggccgc
      301 cggcgaggtg agcttcggcg cgagggtcgc gagggaccgg tccaccagct ccgcgatcgg
      361 tatccggagc ccccgggatt cgaggatcgt gaggatcccc agcgtgtgac gacgcaggcc
      421 gtaggggtcc gcggttcccg tcgggatgag ccccacgccg aagcagccac acaccatgtc
      481 gatcttgtcg gcgatcgccg tcgcggcccc cacgtccgtg gtcggcaggt cgtcggactg
      541 tcccttcggc aggtagtgct cgaacaccga ctgcgccacc tcgaccgact cgccggtctt
      601 cgatgcgtag tgccgcccca tcaccccctg cagctccggg aactccttga tcacgcccgt
      661 ggtcaggtcg gccttgctga ggaacgccgc gcggcggcaa tccttcgcct tggcggggaa
      721 accgaaggcg gcgacgaact ccgcgatgtc ggccatccgt tcgacctttt cccaatacgt
      781 ccccatgtcc gcctggaaaa ggactttctt cagcgcctcc gtgcgttcga acaggggctt
      841 cttgaggtcg tccccgtagt aaaactcggc gtcggagagc cgggcccgga gaacccgctc
      901 gtttcctgcc acgacgaccg acgggtctgg aacgatcatg ttcgaaacga aggcgaaccc
      961 cgggaacagc ccccccttcg catcctcgaa gacgaaatat ttctggttgt tccgcatcga
     1021 ggtgacgagg acctccctcg gcagggagag gtacttctcc tcgaaccgcc ccaacaggac
     1081 gacgggatac tcgacgaggt tcgccacggt ctcgaccagc ggctcgtcct cgacccattt
     1141 catgccgatc cgctgttccg cctcccggat ccccgcgcgg atcctcccct tccggtcttc
     1201 caggtccacg agcacccggg cctccgcgag ccgcccgggg tattcggagg tcgagggaag
     1261 ctcgatggcc ccgggggcga ggaagcggtg cccgaaggtc gtccgccccg acgcgatgtt
     1321 tccgaacgaa aacggcagga cctcgtcgcc gtacagcgag acgatccagt gaacagggcg
     1381 tgcgaatttc acgtcgaggt cggcccaccg catcgatttc ttgaacggaa tcgcaggcag
     1441 gaagtcggag gcgatcttcg ggaggatctc ctggaccggg cgggccgcct cctcgcgaac
     1501 gaagccgagg tagtctccgc gatcggtcgg gaagacggag agggccgaga cgtcgatccc
     1561 ctgggacttg gcgaa
//
LOCUS       DATGYW010000120         1692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_331259, whole genome shotgun sequence.
ACCESSION   DATGYW010000120 DATGYW010000000
VERSION     DATGYW010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331259"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..102
                     /locus_tag="VK429_01635"
     CDS             <1..102
                     /locus_tag="VK429_01635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017933820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN90543.1"
                     /translation="FGLKIAEGSPAEIRDDPQVIEAYLGAAEGNPDA"
     gene            95..799
                     /locus_tag="VK429_01640"
     CDS             95..799
                     /locus_tag="VK429_01640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017380693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN90544.1"
                     /translation="MLEVRGIETYYGNIPALREISIDVPGGSVVAIIGANGAGKTTLM
                     KTIAGVLRPRSGTVSFLGEEITGLPSHKIVRRGVALVPEGRAILSRMTVRENLEMGAF
                     TRRDAKKASLDMDRVMERFPVLKERAGQLGGSLSGGEQQMLAIARALMSAPKLLLLDE
                     PTLGLAPLVVADIFAIIREINATGTTILLVEQNVKQALKVSGYAYVLETGEIAISGPS
                     KELLMEPRIKASYLGK"
     gene            complement(774..>1692)
                     /locus_tag="VK429_01645"
     CDS             complement(774..>1692)
                     /locus_tag="VK429_01645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012258886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLN90545.1"
                     /translation="FYNAWLPDIAPSEDRDSVSSVGWALGYLGGGILLLLNLILFSRA
                     RSFGLTTGEAVRISLASAGIWWALFSLLPLATMRRREAARRLPAGEGLLGTGFRQLRR
                     TFAEAKSHPQLLLFLGAYMLYNDGVQTVIALSSQFGQEELGLSVSTLTTAILMVQFVA
                     FFGALLFNAFAKRVGAKAAVAISLLLWTGTLVYAYAGLRDAAGFYAMAACVAVVLGGS
                     QALSRSLFSRMIPVGQEAEYFSLYEVSERGTSWLGPLLFGLALQFTGSYRVAILSLAV
                     FFIAGLALLLRVDVARAEAEAITSPGTMP"
BASE COUNT          328 a          553 c          590 g          221 t
ORIGIN      
        1 ttcggcctga agatcgcgga agggtcgccg gcggagatcc gggacgaccc gcaggtgatc
       61 gaggcatacc tcggcgccgc ggaagggaac cccgatgctt gaggtccggg ggatcgagac
      121 gtattacggc aatatccccg ccttgaggga gatctccatc gacgttcccg ggggaagcgt
      181 cgtcgccatc atcggggcga acggggcggg gaagaccacg ctgatgaaga cgatcgcggg
      241 ggtccttcgg ccgcgctccg gaacagtctc cttcctcggc gaggagatca ccggcctccc
      301 ctcccacaag atcgtgcggc gcggcgtcgc gctggtcccg gaggggcggg cgattctctc
      361 ccggatgacg gtccgcgaga acctcgagat gggggcgttc acgcggcgcg acgcgaagaa
      421 ggcgtcgctg gacatggacc gcgtgatgga gcggttcccc gtcctcaagg aacgggcggg
      481 gcagctcggc gggtcgctct cgggcggcga gcagcagatg ctggcgatcg cccgcgcgct
      541 gatgtccgcc ccgaaactcc tgctgctgga cgagcccacc ctcggcctcg cgccgctcgt
      601 ggtggccgac atcttcgcca tcatccgcga gatcaacgcg accgggacca ccatcctgct
      661 cgtcgagcag aacgtgaagc aggcgctgaa ggtctccggc tacgcctatg tcctcgagac
      721 gggggaaatc gcgatctccg gaccgtccaa ggagttgctt atggagccgc ggatcaaggc
      781 atcgtacctg gggaagtgat cgcttccgcc tcggcgcgcg cgacgtccac gcgtagcaga
      841 agggcgagcc cggcgatgaa gaagaccgcc agcgagagga tcgcgacgcg gtaggatccg
      901 gtgaactgca gcgccaaccc gaaaaggagg ggccccagcc agctcgtgcc acgctcgctc
      961 acctcgtaca gggagaagta ctcggcctcc tgcccgaccg ggatcatccg ggagaagagg
     1021 gaccgggaaa gggcctggct cccgccaagg acgacagcca cgcatgccgc catcgcgtag
     1081 aatccggccg catcccgaag cccggcgtag gcgtagacga gcgtccccgt ccacaggagg
     1141 agactgatcg ccaccgccgc cttcgccccc acccgcttcg cgaacgcgtt gaagagcagg
     1201 gccccgaaaa aggcgacgaa ctggaccatg aggatcgccg tggtcaacgt cgaaacggag
     1261 aggcccagct cctcctggcc gaactgggac gagagggcga tcacggtctg cacaccgtcg
     1321 ttgtagagca tgtaggcccc gaggaacaga aggagctgcg gatgactctt cgcctccgcg
     1381 aacgtgcgcc gcagctggcg gaatccggtt ccgaggagcc cctcccccgc cggaagccgc
     1441 cgcgcggcct cccggcgacg catcgtggca agcggcagga gggagaagag ggcccaccag
     1501 atacccgccg aggcgaggct gatccggacc gcctctccgg tcgtcagtcc gaaggagcgc
     1561 gcacgggaga aaaggatcag gttcaggaga aggaggatgc cgcccccgag gtacccgagc
     1621 gcccacccca cggaggagac ggaatcgcgg tcttccgaag gcgcgatatc gggcagccag
     1681 gcgttgtaga ag
//
LOCUS       DATGYW010000121         2624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_224493, whole genome shotgun sequence.
ACCESSION   DATGYW010000121 DATGYW010000000
VERSION     DATGYW010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2624
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224493"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1024)
                     /locus_tag="VK429_01650"
     CDS             complement(<1..1024)
                     /locus_tag="VK429_01650"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN90546.1"
                     /translation="MRLAIRMAIAGNGLAAAWMLLLPAGAGAAAPDKVKVGFMFGMTG
                     AASPIGPVQLDGAKLAVKEINAGGGVMLGGKKVPVEFVVRDDETKPDIAIRRFRELLT
                     EEKVHLIVGQTFAPISGALNKEVKKTPVLYFPVNVVALKMFEKSEMAPSTFAPHGSAY
                     AAGYAGAAYIIKNLGYKKIVFFGPAYAFGQDQWAGAKDAMKKYGVTAEYLESPVGTSD
                     FTPYLTKVAEKKPEIVMLAHWGVDAINVLKQSYEIGLKKKTKIWFNWMTNVFGTGVPA
                     DALDGVYSLMSWYYDMTGFKDAVVVKAANDFSGKFRKEYGYPPDPYSAMAYIGTMEAL
                     RGIGLAQ"
     gene            complement(1067..1717)
                     /locus_tag="VK429_01655"
     CDS             complement(1067..1717)
                     /locus_tag="VK429_01655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014271004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HLN90547.1"
                     /translation="MTGKAKVGIPAEKTAIVLIEPQNDFLSPGGTMYAYIKEQLAERG
                     VIGNLANLLAKARGKVKIFYVPFHPFEKGFPELKKGGPGCEGLRGIEMDMKADWGTGA
                     WLKGTPGPEIVKELTPRKGDIIVEGKMTLDAFHSTALDYLLRANQIEYVAFTGFHTNW
                     CVESSARSAYDKGYRVHVISDCTATDTAEEQNYAEKWIFPKIGKVMTSKEFLASLV"
     gene            complement(1714..2400)
                     /locus_tag="VK429_01660"
     CDS             complement(1714..2400)
                     /locus_tag="VK429_01660"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HLN90548.1"
                     /translation="MAKLVPVNLSERAYVKIKKMISDYRFSPGSRLNVEQLARDFGTS
                     RTPVWEAVRRLEQEGLVKNIPNRGVFLLELTREIAIELYSVREVLEGMAARLAVQGIS
                     EKTLEKMEALLRAQEKIVAEEDLVSYSKSDFEFHACIYAACGNAILREMLESIKQKAR
                     PIAMHITPILTELFHDHEMIVHALRLRDPLLAEVAFREHNQRVLRQLKQEDLNGRIRR
                     TNIPPKGRKR"
BASE COUNT          439 a          850 c          771 g          564 t
ORIGIN      
        1 actgcgccag cccgatcccg cggagcgcct ccatcgttcc gatgtacgcc atcgcgctgt
       61 acgggtcggg ggggtagccg tattccttcc ggaacttccc gctgaagtcg ttcgcggcct
      121 tgaccaccac ggcgtccttg aaccccgtca tgtcgtagta ccaggacatg agggagtaga
      181 ccccgtccag ggcgtcggcg gggacgccgg ttccgaagac gttggtcatc cagttgaacc
      241 agatcttcgt cttcttcttg agcccgattt cgtaggactg cttgaggaca ttgatcgcat
      301 ccacccccca gtgggcgagc atcacgatct cgggcttctt ctccgcaacc ttggtgaggt
      361 acggggtgaa atcgcttgtc ccgaccgggg attcaaggta ttccgccgtg acgccgtact
      421 tcttcatggc gtccttcgcg ccggcccact ggtcctgtcc gaacgcgtag gcgggcccga
      481 agaagacgat cttcttgtag ccgagattct ttatgatgta ggcggccccg gcgtacccgg
      541 cggcgtacgc gctgccgtgg ggggcgaagg tcgaaggcgc catctcggac ttttcgaaca
      601 tcttgagcgc gaccacgttg accgggaagt agagcacggg cgtcttcttc acttccttgt
      661 tcagcgcccc ggagatcggg gcgaacgtct gcccgacgat caagtggacc ttctcctccg
      721 tcaggagctc gcggaaccga cggatcgcga tgtccggctt cgtctcgtcg tcccggacga
      781 cgaattccac cgggaccttt ttcccgccga gcatcacgcc gccacccgcg ttgatctcct
      841 tgacggccag cttcgcgccg tcgagctgca ccgggccgat cggcgaagcc gcgccggtca
      901 tcccgaacat gaaccccacc ttgaccttgt cgggcgccgc cgctcccgcc cccgcgggca
      961 acaggagcat ccatgccgcc gcaagcccgt ttcccgcgat cgccatcctt atcgcaagcc
     1021 gcattcccct gcctcctctt ctcgccgtcc gccggcggtg ccttccctat acgagggaag
     1081 cgagaaattc cttggatgtc atgactttcc cgatcttcgg gaagatccac ttctccgcgt
     1141 agttctgctc ttccgcggtg tcggtcgccg tgcagtccga gatcacgtgc acccggtacc
     1201 ccttgtcata ggcggaccgt gccgacgact cgacgcacca gttggtatgg aacccggtga
     1261 acgcgacgta ctcgatctga ttggcccgca gcaggtagtc gagcgccgtc gaatggaacg
     1321 cgtcgagcgt catctttccc tccacgatga tgtcgccctt ccgcggcgtg agctccttga
     1381 cgatctcggg acccggggtc cccttcagcc acgcgccggt tccccagtcg gccttcatgt
     1441 ccatctcgat cccgcgcagt ccctcgcatc cgggcccgcc cttcttcagc tcggggaacc
     1501 ccttctcgaa cgggtgaaac gggacgtaaa agatcttcac cttgccccgc gccttcgcga
     1561 gaaggttcgc caggttcccg atcacgccgc gttccgccag ctgttccttg atgtaggcgt
     1621 acatcgtgcc gcccggcgaa agaaaatcgt tctgcggttc gatcaggacg atcgccgtct
     1681 tctccgctgg tattccgacc ttcgctttcc ctgtcatcgc ttcctccctt tcggcgggat
     1741 gttggtacgg cggattcgac cgttcaggtc ttcctgcttc aactgcctca gaaccctttg
     1801 gttgtgctca cggaaggcga cctcggcgag caggggatcg cgcaggcgca gggcgtgcac
     1861 gatcatctcg tggtcgtgga acagctccgt gaggatcggc gtgatgtgca tggcgatcgg
     1921 gcgtgctttc tgcttgatgc tttccagcat ctcgcgaagg atcgcgttac cgcaggcggc
     1981 gtagatgcag gcgtggaact cgaagtcgga cttggagtac gagaccaggt cctcctccgc
     2041 gacgatcttc tcctgcgccc gcagcagcgc ctccatcttc tcgagagtct tttcggagat
     2101 cccctgcacg gcgaggcggg cggccatccc ctcgagcact tcccggaccg agtacaactc
     2161 gatggcgatc tcgcgggtca gttccaggag aaagaccccc cggttcggaa tgttcttcac
     2221 gagcccttcc tgctccagac ggcgcacggc ttcccagacc ggagtgcggc tggtcccaaa
     2281 gtcgcgcgca agctgttcca cgttgaggcg gctgccgggg gagaaccggt agtcggagat
     2341 catcttcttg attttgacgt aggcgcgctc gctcaggttg acggggacca acttggccaa
     2401 tgcggggcac cccccgggaa ggaagcatgg tgcgttcgtt tcattgtatc gtcaggggta
     2461 cggatgtcaa gaaatttcat gacatatgaa gtataccgta cgaatatatg atatttaaca
     2521 gatagttgga acaccattgc gcttttcgtt acttttcttg cacgaacggg ggacgaagat
     2581 cccgatcacg gggtggaacg cgggtcctcg caccgtggga gatg
//
LOCUS       DATGYW010000122         1799 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_4720, whole genome shotgun sequence.
ACCESSION   DATGYW010000122 DATGYW010000000
VERSION     DATGYW010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1799)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1799)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1799
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4720"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1103
                     /locus_tag="VK429_01665"
     CDS             <1..1103
                     /locus_tag="VK429_01665"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HLN90549.1"
                     /translation="TRTSYFKDVKISTAPSTAPGEMDVKVEVQEGPTGTLSGGLGYSS
                     LDKIFGTIQVSENNLFGSGWRASLNSQFGARRTTYSLDFRDPYFLDSDFSLLLGVYKT
                     RVKYTDFEKDARGGRVGLGYNFTKFVNGAVSLRADDTSILALSGTIPSFNVQQEIDKG
                     LQKTRSIGFNVTRNTTDRFIDPSRGSVQSATLEYAGGPLLGGDSHFVKYFLNAKWFRP
                     VTATTTFSYNVLWGHVVPTGGVAEVPLFERFFLGGPYSIRGYQSRSLSPKDPNTGELI
                     GGNKELIMNLEYLFPLVGEIGFKGVLFFDAGNSWAQGSWPFNDQGVWAAYGVGVRWYS
                     PMGPLRFEVGWNLDRPEGQPRRVMEFTIGTAF"
     gene            1136..1708
                     /locus_tag="VK429_01670"
     CDS             1136..1708
                     /locus_tag="VK429_01670"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HLN90550.1"
                     /translation="MRKAGIILVAVAMAAVFAGTSLAEGLRVAVIDVNKILNDSEAGQ
                     AAKKKMEARYEELKKTIDAKQEEARKIKEEIDKQKVMLGKEKLKEKEDALQAKLNELR
                     QLTQEGEREMQTRQGEFTREVLKSIEAKVDVVVKAEKLDLVLEKSAGVVHFNESMDIT
                     KRVLALVDGDGKAAPEKKAAPEKKGAGGGK"
BASE COUNT          383 a          486 c          639 g          291 t
ORIGIN      
        1 tgacgcgcac gtcgtacttc aaggacgtga agatcagcac cgcgccttcc acggcgccgg
       61 gagaaatgga cgtgaaggtc gaggtgcagg aaggaccgac cgggaccctg tcgggcgggc
      121 tcgggtacag ttcgctcgac aagatcttcg ggaccatcca ggtgagcgag aacaacctct
      181 tcggcagcgg atggagggcg tccctcaact cccagttcgg ggcgcggcgg accacgtaca
      241 gcctcgactt ccgtgatccg tatttcctgg acagcgactt cagcctgctc ctcggcgtct
      301 acaagacgag ggtgaagtac accgatttcg agaaggatgc gagaggcggg agggtaggcc
      361 tcggatacaa ctttacgaaa ttcgtcaacg gtgccgtctc cctgcgtgcc gatgatacca
      421 gcatccttgc gctgtccggc accatcccct catttaacgt gcagcaggag atcgacaagg
      481 gcctccagaa gacccggagc atcggcttca acgtgacgcg gaacaccacg gaccggttca
      541 tcgacccctc gcggggaagc gtccaatcgg ctactctgga gtacgcgggc gggccattat
      601 tgggcggtga cagccatttc gtcaaatatt tcctgaacgc gaagtggttc cgcccggtga
      661 ccgctaccac cacattttcg tataacgtct tatgggggca cgtggttccg acgggggggg
      721 tcgcggaagt ccctctgttc gagcggtttt tcctgggcgg cccctacagc atccggggat
      781 accagtcccg gtccctctct ccgaaggacc ccaacacggg ggaattgatc ggcgggaaca
      841 aggagttgat catgaacctg gagtacctgt tccccctcgt cggcgagatc gggttcaagg
      901 gggtactctt tttcgacgcg gggaacagct gggcgcaggg atcctggccc ttcaacgacc
      961 agggggtgtg ggcggcctac ggggtcggcg tccgctggta ttcgccgatg gggccgctgc
     1021 gcttcgaggt gggatggaat ctcgaccgcc cggaggggca gccgaggcgc gtgatggaat
     1081 tcacgatcgg gacggcgttc tgatcgaact acgggaaggg aaaaggagga aggggatgcg
     1141 gaaagcggga atcatcctgg ttgcagtggc gatggcggcg gtcttcgcgg ggacctccct
     1201 cgcggaaggg ctgcgggtgg ccgtcatcga cgtcaacaag atcctcaacg actccgaggc
     1261 ggggcaggcg gcgaagaaga agatggaggc ccggtacgag gagctgaaga aaacgatcga
     1321 cgcgaagcag gaggaggcgc ggaagatcaa ggaagagatc gacaagcaga aggtgatgct
     1381 gggcaaggag aagctcaagg agaaggagga cgccctccag gcgaagctca acgaactgcg
     1441 ccagctgacc caggaggggg agcgggagat gcagacccgg cagggcgagt tcacccgcga
     1501 agtgctcaag tcgatcgagg cgaaggtgga cgtcgtcgtg aaggctgaaa agctcgacct
     1561 cgtcctcgaa aaatcggcgg gggtagtcca tttcaacgag tcgatggaca tcacgaagcg
     1621 ggtccttgcc ctcgtggacg gggacggcaa ggcggcgccg gagaagaagg cagcgccgga
     1681 gaaaaaggga gccggcggtg ggaagtagga ttctcctctc ggttctcgcg gagaagatcg
     1741 gggctcgcct ccaggggccg gacggtgagg tgagcgggat cgcggcggtg gacgaggcc
//
LOCUS       DATGYW010000123         2836 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_331516, whole genome shotgun sequence.
ACCESSION   DATGYW010000123 DATGYW010000000
VERSION     DATGYW010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2836
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_331516"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..235)
                     /locus_tag="VK429_01675"
     CDS             complement(<1..235)
                     /locus_tag="VK429_01675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90551.1"
                     /translation="MRTVAGSFFPLAFGILLLLPGTDIALGSDGEANVPARAAGEGTV
                     GSVTPDPPRVDNVPQERLERWRTMSPEERERIRE"
     gene            complement(232..831)
                     /locus_tag="VK429_01680"
     CDS             complement(232..831)
                     /locus_tag="VK429_01680"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HLN90552.1"
                     /translation="MGCRDIHETISACVDGEASPGEAAAVREHLASCERCRVLERQMR
                     AVGAGVRQVRGSVPDRFREKVFARLESEGALPKRKKVFPAAWRWAAVPLAAAAGLGLF
                     LLTSRETVRGPVPPGPGTARVETSAPHAPSPQVDPAALSTEDREMLALLDILEDPAAF
                     DANDDAEGMELLAPGDSADSPNPPRGGRSEAWPGIHSVS"
     gene            complement(880..1458)
                     /locus_tag="VK429_01685"
     CDS             complement(880..1458)
                     /locus_tag="VK429_01685"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HLN90553.1"
                     /translation="MRTDEELMLLFREGSREAFEELFSRHHGAVVRFAWRMTGDPSSA
                     EEAAQEIFLRIARAAPTYRPTAKFTTWMYTIARRATLNYLRDTNDGGEKVPILSEGEG
                     EDGVYPVQLPGPDDRNPEQVVWEAQLTERFRTALGELPEGYRAAFVLNRGDGLSYEEV
                     AQVLGVTMQAVKTRIFRAREMLLSRLSKDVSA"
     gene            complement(1487..2020)
                     /locus_tag="VK429_01690"
     CDS             complement(1487..2020)
                     /locus_tag="VK429_01690"
                     /inference="COORDINATES: protein motif:HMM:NF014912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HLN90554.1"
                     /translation="MKKGPSRARESAVVKGLKQALRNEIDGAEFYRMAAGNARRDAVR
                     QMFQFLMEEEERHRAAIVNQMQRLAEGKGMKFERSASAKKALSKFKSPLFTDDLVKLG
                     RQVEGEVAALSIGMTLEKRAIAQFNALRKTVAGDARAEQVFSDLVAWEQDHLDVLTRQ
                     YDQMREMYWEEARFWPF"
     gene            2059..2619
                     /gene="folE"
                     /locus_tag="VK429_01695"
     CDS             2059..2619
                     /gene="folE"
                     /locus_tag="VK429_01695"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015743275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HLN90555.1"
                     /translation="MQDIIRDLLIKIGEDPDREGLKKTPERFEKSIAFLTQGYQQDPR
                     EVLRSAIFHEQYDEMVTVKDIDIFSMCEHHMLPFFGKCHVAYMPRKHIVGLSKIARVV
                     ELYARRLQVQERLTQEIATALMDTLQPHGVAVVVEAFHLCMMMRGVEKQNAKAVTSAM
                     LGVFRTRESTRMEFLELIKPNLNIVR"
BASE COUNT          466 a         1000 c          877 g          493 t
ORIGIN      
        1 gctcccggat ccgctcgcgc tcctcggggg acatcgtccg ccaccgttcg agccgctcct
       61 gcggcacgtt gtccacacgc ggaggatccg gcgtgaccga ccccacggtt ccctctcctg
      121 cggcacgcgc aggaacgttc gcctccccgt cgctccccag cgcaatatcg gttccgggca
      181 acaacaggag gatcccgaac gcgagcggga aaaacgatcc cgcgaccgtt ctcatgaaac
      241 ggaatggatc ccgggccacg cctcgctcct tccgccccgg ggagggttcg gcgaatccgc
      301 ggagtctccc ggggcgagca gttccatccc ctccgcgtcg tcgttcgcgt cgaacgcggc
      361 cgggtcttcg agaatgtcga gcagtgcgag catctcccgg tcctcggtgg agagtgccgc
      421 cggatccact tgaggggacg gagcgtgcgg tgcggacgtc tcgacccggg cagttccggg
      481 acccggagga acaggtcccc ggaccgtctc ccgcgaggtg aggaggaaga gccccaaccc
      541 tgcggcggcg gccagcggga cggccgccca gcgccatgcc gcgggaaaga ccttctttcg
      601 cttcggtagc gccccttcgg attcgagacg ggcgaaaacc ttctcgcgga accggtcggg
      661 caccgatccc cggacctggc ggacacccgc ccccaccgcg cgcatctgcc gctccagcac
      721 ccggcaccgc tcgcaggaag cgaggtgctc gcgcaccgcc gccgcctccc cgggcgacgc
      781 ttcgccgtcc acgcaggcgc tgatcgtttc atggatgtcg cggcagccca tcgtcatcct
      841 ccgtcctgtt cctgtaaacc cgtggcaggg ggaaaagttt cacgccgaaa cgtccttcga
      901 cagcctggag aggagcatct cgcgggcccg gaagatgcgc gtcttcaccg cctgcatcgt
      961 gaccccgagg acctgcgcca cctcctcgta ggagagcccg tccccccggt tgaggacgaa
     1021 cgcggcccgg tacccctccg ggagttcccc aagggcggtc cggaaacgtt ccgtgagctg
     1081 cgcttcccag acgacctgct ccgggttccg gtcgtccggc ccgggcagct gcaccggata
     1141 gacgccgtcc tccccctccc cttccgaaag gatcgggacc ttctccccgc cgtcgttcgt
     1201 gtcccgcagg taattgagcg tcgcgcgccg ggcgatggtg tacatccatg tggtgaattt
     1261 cgcggtgggg cggtacgtgg gggcggcgcg ggcgatccgc agaaagatct cctgggccgc
     1321 ctcctccgcg gatgaggggt cccccgtcat ccgccaggcg aaccggacca cggcgccgtg
     1381 atggcgggaa aacagttcct cgaacgcctc ccggctcccc tcccggaaga ggagcatcaa
     1441 ctcctcgtcg gtccgcatac tcactccgac gtccgttccc cctccctcag aacggccaga
     1501 aacgcgcctc ttcccagtac atctcccgca tctggtcgta ttgccgcgtc aggacgtcca
     1561 ggtgatcctg ttcccaggcg acgaggtcgg agaagacctg ttccgcccgt gcgtcgccgg
     1621 ccaccgtctt ccgcagggcg ttgaactggg cgatcgcgcg tttctccagc gtcatcccga
     1681 tggagagcgc cgccacctca ccctccacct gccggcccag cttcacgagg tcgtccgtga
     1741 acagggggct tttgaacttc gagagcgcct tcttcgcgga cgcgctccgc tcgaatttca
     1801 tcccttttcc ctctgccaac ctctgcatct ggttcacgat cgccgcgcgg tggcgttcct
     1861 cctcctccat caggaattgg aacatctggc ggaccgcgtc ccgacgcgcg tttcccgccg
     1921 ccatccggta gaactccgcg ccatcgatct cgttgcgcag cgcctgcttc agccccttca
     1981 cgacggcgct ctccctcgcc cgcgacggac cctttttcat ttggggggat cctcctcctg
     2041 cattaagatg attccattat gcaggatatc atccgcgacc tactgatcaa gatcggggag
     2101 gatcccgacc gcgaggggct caagaaaacc ccggagcggt tcgagaaatc gatcgcgttc
     2161 ctgacgcaag ggtaccagca ggatccccgc gaggtgctgc ggagcgccat cttccacgag
     2221 cagtacgacg agatggtgac cgtcaaggac atcgacatct tctcgatgtg cgagcaccac
     2281 atgctcccgt tcttcgggaa gtgccacgtc gcgtacatgc cgcgcaagca catcgtcggg
     2341 ttgtcgaaga tcgcccgcgt cgtcgagctc tacgcccgcc ggctgcaggt gcaggagcgg
     2401 ctgacgcagg agatcgcgac cgccctcatg gacacgctgc agccgcacgg cgtggcggtg
     2461 gtcgtcgagg cgtttcacct gtgcatgatg atgcgcggcg tggagaagca gaacgccaag
     2521 gcggtcacct cggcgatgct gggggtgttc cgcacccggg aatcgacgcg gatggagttt
     2581 ttggagttga taaagccaaa tctgaacatt gtgcgttagg cagcgggagg acactccttc
     2641 ccgcagtggg aggacacacc ttccctgtat cccgggttta caccaggtat gtccccccct
     2701 gacgggaatt ttccggcaat cgccgggggg gtcaagcccg cggggggcgc tccatcgaat
     2761 cgagacgccg ggcaagctcc tcgacccggt ccgacaggcg ccggatttca tcgaagggaa
     2821 gcgctggagc ggatcc
//
LOCUS       DATGYW010000124         3066 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_439591, whole genome shotgun sequence.
ACCESSION   DATGYW010000124 DATGYW010000000
VERSION     DATGYW010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3066)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3066)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3066
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_439591"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..660
                     /locus_tag="VK429_01700"
     CDS             <1..660
                     /locus_tag="VK429_01700"
                     /inference="COORDINATES: protein motif:HMM:NF013046.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HLN90556.1"
                     /translation="AVLSGSSDNVFCAVRPPGHHAGRSTAMGFCFVNNVAAGARYARS
                     AYGVERIYILDWDVHHGNGTQALFEADPLTFFCSLHEHPSFCYPGTGRRLERGKGAGT
                     GATLNVPLAPHAGDREVIEAFEREIVPSIEAFRPGLILLSAGFDAHRDDPIAELECTE
                     EAYAHMTRRVLELADRHCEGRVVSVLEGGYRTESLVSSAIAHIKTLQGREGSPCSSAR
                     G"
     gene            639..1286
                     /locus_tag="VK429_01705"
     CDS             639..1286
                     /locus_tag="VK429_01705"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS and ACT domain-containing protein"
                     /protein_id="HLN90557.1"
                     /translation="MFVGPRMKRDLVTVTPAATLEEAARLLTAHRIHHLPVVEDGDRL
                     AGIVSDTDLRNATLDGMFGGAADRGDSGRPVTVGEIMTRDLVTLSPGDTLDDAMLILS
                     RQRIGALPVVEGGRLVGIVTKADILSALLSTLDIEGLGVRVEVVLPRDVKEVARLAAA
                     LADQGVEVRSLVLAPHGRDRYAAFVRVATIDVASVRDRLRQKGFAVGELSDFYEG"
     gene            complement(1391..2614)
                     /locus_tag="VK429_01710"
     CDS             complement(1391..2614)
                     /locus_tag="VK429_01710"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HLN90558.1"
                     /translation="MADEKLTNRWLMVAAALVMQLCLGVLYSYSVFRGPLMKEVGFTV
                     KQAGYPLMASFFFFAVGMIVAGRWQDKAGPKKVALFGGVLLAVGCFLAGLLYKTVGGL
                     VFAYGVLGGLGVGFAYVTPIATCIKWFPDMRGTITGLAVFGFGAGTLIFGPLISKLVI
                     STGIANAFFAVGVIMLVGVCGSGALFKVPPAGYKPAGWNPPAPSATTPTKADWTPNEI
                     IGNGQFWVLWLIYLFGAAAGLMIIGQAVPIGVEVAKLDKTVAAAGLGTMALLNGLGRL
                     VHGSISDKLGRKNTVILCFAEYLVAFLILLPNSDTFTKWLVGICIVGFSYGGYLAIMP
                     SMTADYFGTKSLGANYGYLFTAWGIAGVGGPFMIDAIKASTGAFTMAMYYISAACVAG
                     IVLVFISKKPVFKGA"
BASE COUNT          557 a          990 c         1010 g          509 t
ORIGIN      
        1 gcggtcctgt cggggagttc ggacaacgtc ttctgcgcgg tccgtccccc ggggcaccac
       61 gcgggacgct ccaccgcgat ggggttctgc ttcgtgaaca acgtcgccgc gggggcccgg
      121 tacgcccggt ccgcctacgg cgtggaaagg atctacatcc tcgactggga cgtccaccac
      181 gggaacggca cgcaggcgct gttcgaagcg gacccgctca cgttcttctg ctccctccac
      241 gagcatccat ccttctgcta cccggggacg gggcgccgcc tcgagcgggg gaagggcgcg
      301 ggaacgggcg ccaccctgaa tgtgccgctg gcgccgcacg ccggcgaccg ggaagtcatc
      361 gaggcgttcg aacgggaaat cgtcccgtcg atcgaggcgt tccggccggg gctgatcctc
      421 ctgtccgccg ggttcgacgc ccaccgggac gatccgatcg cggagctcga gtgcacggag
      481 gaagcctacg cccacatgac gcgccgggtc ctcgaactgg ccgaccggca ctgcgagggg
      541 cgggtcgtct cggtgctgga aggcgggtat cgcacggagt cgctggtctc ctcggcgatc
      601 gctcatataa aaacattgca gggaagggag ggttcgccat gttcgtcggc ccgaggatga
      661 agcgcgacct ggtcaccgtg actcccgcgg cgacccttga ggaggcggcc cgtctgctca
      721 cggcgcaccg gatccatcac ctgccagtgg tggaggatgg ggaccgcctc gccgggattg
      781 tctccgacac ggatctgcgg aacgcgaccc tcgacgggat gttcggcggc gccgccgacc
      841 gcggggattc cggccgcccc gtgaccgtcg gggagatcat gacgcgggac ctggtgaccc
      901 tctccccggg ggatacgctg gacgacgcga tgctgatcct ctcccgtcag cggatcggcg
      961 ccctgccggt ggtcgagggg ggccgcctcg tcgggatcgt caccaaggcg gacatcctct
     1021 cggccctgct gtccaccctc gacatcgagg gactcggcgt ccgggtcgag gtggtcctgc
     1081 cacgggacgt gaaggaagtc gcgcggctgg cagccgcgct cgccgatcag ggcgtggagg
     1141 tgcgcagcct cgtcctcgct ccccacggga gggaccggta cgccgcgttc gtccgggttg
     1201 cgacgatcga cgtggcgtcg gtgcgggacc gtctgaggca gaaggggttc gccgtcgggg
     1261 agctgtcgga cttctacgag gggtagcgga aaagggaacg gcccctcgaa aggggccgtt
     1321 ccggtcgctt gccctacgta gcggcgaagc cgcgaagtag ggttcgggtt gtttgccggt
     1381 gccgggccga tcaggctccc ttgaataccg gcttcttgga gatgaagacc agcacgatcc
     1441 ccgcgacgca ggcggcggag atgtagtaca tcgccatcgt gaatgcaccg gtggatgcct
     1501 tgatcgcgtc gatcatgaag ggtccaccga cgccggcgat gccccacgcc gtgaacaggt
     1561 agccgtagtt cgcccccagc gacttcgtgc cgaagtagtc ggccgtcatc gagggcatga
     1621 tcgccaggta tccgccgtag gagaagccga cgatgcagat cccgaccagc cacttggtga
     1681 acgtgtcgga gttcgggagc aggatcagga acgccacgag gtactccgcg aagcagagga
     1741 tgacggtgtt cttccggccc agcttgtcgg agatcgaccc gtggaccagc cggccgaggc
     1801 cgttgaggag cgccatcgtc ccgagacccg ccgccgccac cgtcttatcg agcttggcga
     1861 cttcgacccc gatcggaacg gcctgcccga tgatcatgag gcccgccgcc gcgccgaata
     1921 agtagatgag ccacagaacc cagaactggc cgttcccgat gatctcgttc ggggtccagt
     1981 cggccttggt cggcgtggtg gccgacgggg ccggcggatt ccagccggcc ggcttgtacc
     2041 cggcgggcgg gaccttgaac aaggcgccgg atccgcagac accgaccagc atgatcacgc
     2101 cgactgcgaa gaaggcgttc gcgatacccg tggagatgac aagcttggag atcagtggtc
     2161 cgaagatcag cgttccggcg ccgaacccga agaccgcgag accggtgatc gtaccgcgca
     2221 tgtcggggaa ccacttgatg caggtggcga tcggggtcac gtaggcgaac ccgacgccga
     2281 ggccgccgag gacgccgtag gcgaagacca gcccgccgac cgtcttgtac agcaggcccg
     2341 cgaggaagca acctaccgcg aggagaacac ccccgaagag cgcgaccttc ttcggcccgg
     2401 ccttgtcctg ccatcttccg gccacgatca tcccgaccgc gaagaagaag aacgaggcca
     2461 tcaacggata ccccgcctgc ttgaccgtga atccaacctc cttcatcagc ggcccgcgga
     2521 acacggagta cgaatagagg actccgaggc acagctgcat gaccaaggcg gcggcaacca
     2581 tcaaccagcg attcgtcaac ttctcatcag ccattctgtt tccccctcct tcttgaatta
     2641 tctcgttttg gatcctctga acttggtccc ctcaatcgtg gtcgatacgt cccgggtcca
     2701 cctcctttcg gggagaagcg gttttaccct gtaaaataag atttccctat cttctacctc
     2761 aaacgaaaaa ccggtgtcaa ggaattttat aaacatggtt ttattgtcgc tccccggatc
     2821 gcgtccagtg ccgccctccg gaaacgttcc ccggagggaa tccgggcact ggagcggggt
     2881 catctaaagt ggaaatacta ctagaggaga atccatcatg acccccttcc acgagatcaa
     2941 gaccgtcccc cctgtcaagg cgatcgggat gcgcggagac ctgtcgctct gggacgtcga
     3001 caccgccctc gggcggctgt acgacaaggc gatggaggga cgactgatgt tccgcgagcc
     3061 ggccat
//
LOCUS       DATGYW010000125         2779 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_65289, whole genome shotgun sequence.
ACCESSION   DATGYW010000125 DATGYW010000000
VERSION     DATGYW010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2779
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65289"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..450)
                     /locus_tag="VK429_01715"
     CDS             complement(<1..450)
                     /locus_tag="VK429_01715"
                     /inference="COORDINATES: protein motif:HMM:NF012373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I subunit 1 family protein"
                     /protein_id="HLN90559.1"
                     /translation="MTGPLFDIAVAVARIAVFFAFCFGLVVVMTWVERKGAAYIQDRR
                     GPNRADIFGIRAWGLFHPLADALKFLFKEDFIPDNAHRLFYQLAPMFSLAPAILAIAV
                     IPFGPDVTVMGRRIALQIADLNVGILYLFAVSGMTVYGVVLAGWASGS"
     gene            complement(447..2024)
                     /locus_tag="VK429_01720"
     CDS             complement(447..2024)
                     /locus_tag="VK429_01720"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HLN90560.1"
                     /translation="MPSVTIDGIVVDVPVGTTIINAAEKIGIEIPRYCYHKKLSIAGN
                     CRMCLVEVEKFPKLQTACSTVVTDGMVVRTDTEKVRKAVTGVLELMLIHHPIDCPICD
                     QAGECGLQNYYMKFGLHKSRYALEDKVHKKKVQDIGGQIVLDAERCILCSRCVRFLTE
                     VTGTQELHFFNRGDHSEISIFPGKPLDNNYTGNLADICPVGALTSKDFRFKCRVWFLN
                     VFDSICTGCSKGCNVDAHHKGDILYRLKPRWNDAVNQAWMCDFGRLTYKAMNEARLLT
                     PFVREEGARKVAAWGSLLPDVAFRLKAAAEKGGPDRVGVIASPQSSNEELYLLRRLAT
                     ELLGTKNLAFTHRVAGDGFADDFLIQADKNPNSRGAQLLGIPGGAAFDALVSKIAGGG
                     IDALLVFGNVLGALSEEETAALLAKVPFVVQVGTNEGPVSKAATAVLPSASVAERGGT
                     FTNHAGRVQRFRPGFPARGKAKNPVEILVALGNRLGAGWTFAGEASVFKGIAETEAPF
                     AGMSYDSIGMFGQEVKG"
     gene            complement(2035..>2779)
                     /locus_tag="VK429_01725"
     CDS             complement(2035..>2779)
                     /locus_tag="VK429_01725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012099171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /protein_id="HLN90561.1"
                     /translation="INSLEGKRGWPRLKPPFPASVGAFGLPTIVNNVETIADIPWIIT
                     HGGETFAALGVEKNGGTRLIGVSGAVNRPGVYELSAGINLKEIIYSHAGGIKDGKELK
                     AVIPGGSSTPVLRPDEIDVSYDIESMAKIGTMAGSGGVIVIPEGTCMVRALSVLMNFY
                     AHESCGQCTPCREGTGWLKTIVGRIEAGKGRQGDVELILDVCDNMMGRTICPLADAAA
                     MPAQSFIWKFREEFDRHIGEQKCPYGNKF"
BASE COUNT          448 a          950 c          893 g          488 t
ORIGIN      
        1 gctcccgctg gcccatccgg cgaggaccac gccgtacacg gtcatccccg agacggcgaa
       61 cagatagagg atgccgacgt tcaggtccgc gatctgcagc gcgatcctgc gtcccatcac
      121 ggtgacgtcg ggtccgaaag ggatgacggc gatcgccagg atcgccggcg ccagcgagaa
      181 catcggcgcc aactggtaga agagccggtg cgcgttgtcg gggatgaagt cctccttgaa
      241 gaggaacttc aacgcatcgg ccagagggtg gaagagcccc cacgcgcgga tgccgaaaat
      301 gtcggcccgg ttgggcccgc ggcggtcctg gatatacgcc gcccccttcc gctccaccca
      361 ggtcatcacg acgaccaggc cgaagcagaa cgcgaagaag accgcgatcc tcgcgaccgc
      421 caccgcgatg tcgaacaggg ggccggtcat cccttgacct cctgcccgaa catgccgatc
      481 gagtcgtagc tcattcccgc gaagggcgcc tcggtctccg cgatcccctt gaacaccgag
      541 gcctcgccgg cgaacgtcca cccggctccc agccggttgc ccagcgccac gaggatctcg
      601 accggattct tcgcctttcc ccgcgccggg aatccgggcc ggaaccgctg cacacggccg
      661 gcgtggttgg tgaaggtccc gccccgttcg gcgacggagg ccgacggcag gacggcggtc
      721 gccgccttcg agaccggtcc ctcgttcgtc cccacctgga cgacgaacgg gaccttggcc
      781 agcagcgcgg ccgtctcctc ttccgaaagg gctccaagga cgttgccgaa gacgaggagg
      841 gcgtcgatcc cgccgccggc gatcttcgac accagcgcgt cgaacgccgc gccgccgggg
      901 atcccgagga gttgcgcgcc gcggctgttc gggttcttgt ccgcctggat caggaagtcg
      961 tcggcgaagc cgtcccccgc gacccggtgg gtgaaggcga ggttcttcgt gccgagcagt
     1021 tccgtcgcaa ggcgtcgaag gaggtacagt tcctcgttgg aggattgcgg ggaggcgatc
     1081 acgccgaccc ggtccgggcc acccttctcc gccgccgcct tcaggcggaa cgccacatcg
     1141 gggaggagcg acccccacgc ggcgactttc cgcgcgccct cttcccgcac gaagggcgtg
     1201 agcaggcgcg cctcgttcat cgccttgtag gtgagacggc cgaagtcgca catccacgcc
     1261 tggttgaccg cgtcgttcca gcggggcttc agccggtaca ggatgtcgcc cttgtggtgc
     1321 gcgtcgacgt tgcacccttt cgagcagccg gtgcagatcg aatcgaacac attgaggaac
     1381 cagacgcggc acttgaaccg gaaatccttg ctcgtcagcg cgcccaccgg gcagatgtcg
     1441 gcgaggttgc cggtgtagtt gttgtcgagc ggcttccccg ggaagatcga gatctcggag
     1501 tggtcccccc ggttgaagaa gtggagctcc tgcgttccgg tcacctcggt caggaaccgg
     1561 acgcaccggg agcagaggat acaccgctcg gcgtcgagca cgatctggcc gccgatgtcc
     1621 tgcaccttct tcttgtggac cttgtcctcg agggcgtacc ggctcttgtg gagaccgaac
     1681 ttcatgtagt agttctgcag tccgcactcc ccggcctggt cgcagatggg gcagtcgatc
     1741 gggtggtgga tcagcatcag ctcgaggacg ccggtgaccg ccttgcgcac cttctccgtg
     1801 tcggtgcgca cgaccatccc gtcggtgacc actgtggagc aggcggtctg aagcttcggg
     1861 aacttctcca cctcgacgag gcacatccgg cagttccccg cgatggagag cttcttgtgg
     1921 tagcagtagc gggggatctc gatgccgatc ttctccgcgg cattgatgat cgtcgtcccg
     1981 acggggacgt ctaccacgat tccatcgatc gttacgcttg gcataggctc cgcttcagaa
     2041 tttgttcccg tacgggcact tctgctcgcc gatgtggcgg tcgaactcct cgcggaactt
     2101 ccagatgaac gactgcgcgg gcatcgcggc ggcgtcggcc agcgggcaga tcgtccgccc
     2161 catcatgttg tcgcacacgt cgaggatcag ctcgacgtcc ccctgccggc ccttccccgc
     2221 ctcgatcctc ccgacgatcg tcttcagcca ccccgtccct tcgcggcacg gcgtgcactg
     2281 cccgcacgac tcgtgggcgt agaagttcat gaggaccgag agggcccgca ccatgcaggt
     2341 tccttccgga atgacgatca ccccgccgga tcctgccatc gtcccgatct tcgccatcga
     2401 ctcgatgtcg tacgacacgt cgatctcgtc gggccgcagc acgggcgtgg acgagccgcc
     2461 ggggatgacg gccttgagct ccttcccgtc cttgatgccg ccggcgtggc tgtagatgat
     2521 ctccttgagg ttgatccccg cggaaagctc gtagacgccg ggccggttga cggcgccgct
     2581 gacgccgatc aggcgcgtcc cgccgttctt ctccacgccg agcgcggcga acgtctcccc
     2641 gccgtgggtg atgatccacg ggatgtccgc gatggtctcc acgttgttca cgatcgtcgg
     2701 cagcccgaag gcccccaccg atgccgggaa agggggtttg agcctcggcc atccgcgctt
     2761 cccctcgagg gagttgatc
//
LOCUS       DATGYW010000126         1636 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_65825, whole genome shotgun sequence.
ACCESSION   DATGYW010000126 DATGYW010000000
VERSION     DATGYW010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65825"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..796)
                     /locus_tag="VK429_01730"
     CDS             complement(41..796)
                     /locus_tag="VK429_01730"
                     /inference="COORDINATES: protein motif:HMM:NF013183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HLN90562.1"
                     /translation="MATRVGIVILGDEVLKGEIREANLAYMIPLLAEWGAETALCAIL
                     PDNIPVVVRHLRRFREEVDFLILTGGIGPTPDDITRDAVAEVAGVPLIVHPEAKAALE
                     ARPYKGANPEYRLLMALVPEGATLIPNPLSPAPGFFIDRMAIFPGVPRMLQAMFEWVK
                     PRISGRRKSRVTLYAMAPESSYAGIMKEAMTAFPDVGIGSYPMSEGEYRVRVVFRGDR
                     FERADACAALFTKRLSEIGYEVLRRAEERGDDA"
     gene            904..>1636
                     /gene="purM"
                     /locus_tag="VK429_01735"
     CDS             904..>1636
                     /gene="purM"
                     /locus_tag="VK429_01735"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012647854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HLN90563.1"
                     /translation="MLKKSVTYRAAGVDIDEGERLVRRIRPMVRTTHRKEVLGEIGSF
                     AGFFRFPARKYRDPVLVSGTDGVGTKVKVAAAAGKFDTVGIDLVAMCVNDILVHGAEP
                     LFFLDYYATGKLSADHGAQVVSGVAEGCRQAGCALLGGETAEMPSVYARGEFDLAGFA
                     VGAVDRGRIIDGSSVRPGDLLVGLSSSGLHSNGYSLARKVVFDILRKRIGQRVPEWGA
                     TVAEELLRPTRIYVRPILSLLRKMTI"
BASE COUNT          260 a          563 c          542 g          271 t
ORIGIN      
        1 gtgctcgaat gccaggctat ttgcgagacg ctgccctagg ttacgcatcg tcgccgcgct
       61 cctccgcccg gcggagaact tcatacccga tctccgagag gcgcttcgtg aagagggcgg
      121 cgcacgcgtc cgcccgttcg aaccggtcgc cgcggaagac gacccggacg cgatactccc
      181 cttcgctcat cgggtacgag ccgatgccga catcggggaa cgccgtcatc gcctccttca
      241 tgatgccggc gtaggacgac tcgggcgcca tggcgtagag ggtgacgcgg ctcttgcggc
      301 ggccggaaat cctcggcttc acccactcga acatcgcctg aagcatgcgc gggacgccgg
      361 ggaagatcgc catccggtcg atgaagaagc cgggggccgg ggagagcggg ttcgggatca
      421 gcgtcgcgcc ttccgggacc agggccatca gcaaccggta ttccgggttc gcccccttgt
      481 acgggcgggc ttccagcgcc gccttcgcct ccgggtggac gatcagcgga accccggcga
      541 cctcggccac cgcgtcccgg gtgatgtcgt ccggcgtggg gccgatcccc cccgtgagga
      601 tgaggaagtc gacctcctcg cgaaaccggc gcaggtgccg caccaccacg ggtatgttgt
      661 ccgggaggat ggcgcacagc gccgtctccg ccccccactc ggccagcagc gggatcatgt
      721 aggcgaggtt cgcctccctg atctcccctt tgagcacctc gtcgccgagg atgacgatcc
      781 ccactctcgt cgccatgcct ccctcccggt tcgaatcgtt tcatcttacc ccgtgatggg
      841 tcgaaaatca ttgacatccc cgttgatgac tcgttaccgt gggatacatc ccatccggag
      901 cgcatcttga aaaaatccgt cacgtacaga gccgccggtg tcgacatcga cgagggggaa
      961 cgcctcgtgc gccggatccg accgatggtc cgcacgacgc accgcaagga ggtgctcggg
     1021 gagatcggct cgttcgcggg cttcttccgc ttcccggcgc ggaagtaccg cgacccggtc
     1081 ctcgtctcgg gcaccgacgg cgtgggaacg aaggtcaagg tcgccgcggc ggcggggaag
     1141 ttcgacacgg tggggatcga cctcgtcgcc atgtgcgtca acgacatcct cgtccacggc
     1201 gccgagccgc tcttcttcct cgactactac gccaccggga agctttcggc cgaccacggg
     1261 gcccaggtcg tatcgggcgt cgcggaaggg tgccggcagg ccggctgcgc gctgctcggg
     1321 ggagagaccg cggagatgcc gtcggtctac gcccggggag agttcgacct cgcgggattc
     1381 gcggtgggag cggtggaccg gggcaggatc atcgacggca gctccgtgcg ccccggcgac
     1441 ctgctcgtgg ggctctcctc ctccggcctc cacagcaacg gctactccct ggcgaggaaa
     1501 gtcgtcttcg acatcctccg aaagcggatc ggacagcgcg tccccgaatg gggcgcgacg
     1561 gtcgcggagg agctgctgcg ccccacgcgc atctacgtgc ggcccatcct ttccctgctt
     1621 cggaagatga cgatcc
//
LOCUS       DATGYW010000127         1704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_386416, whole genome shotgun sequence.
ACCESSION   DATGYW010000127 DATGYW010000000
VERSION     DATGYW010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386416"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1013)
                     /gene="secY"
                     /locus_tag="VK429_01740"
     CDS             complement(<1..1013)
                     /gene="secY"
                     /locus_tag="VK429_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011698432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HLN90564.1"
                     /translation="MLEGFQNITRVPELKRRILITGLLLIVYRIGIHVHTPGIDNLAL
                     KAVFDAQAGTLFGLIDMFSGGALARFSIFTLGIMPYISSSIILQLLTVVIPQLEKLSK
                     EGELGRRKITQYTRYGTIVLSVIQGAGIAVGLESVTAGAGSVVYHPGWAFRVMTIITL
                     TAGTAFLMWLGEQITERGIGNGISLIIFAGIVARFPSGLVRTVTLVRTGEMNIFSGLF
                     LLVLMVAVVAVIIYFERAHRRIPVQYARRIVGRKVYGGQSTHLPLKVNTAGVIPPIFA
                     SSILLFPATIASFIKHPITQSISNALTPGSVGYEVLFVAFIVFFCYFYTAVTFNPVDV
                     ADN"
     gene            complement(1018..1458)
                     /gene="rplO"
                     /locus_tag="VK429_01745"
     CDS             complement(1018..1458)
                     /gene="rplO"
                     /locus_tag="VK429_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003613360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HLN90565.1"
                     /translation="MKLTDLRPAKGAKTARKRVGRGEGSGLGKTSGKGNKGLKARSGG
                     GTKPGYEGGQMPLQRRLPKRGFVNVFREEMAIVNVKELNRFKAGSVVDIEALRREGLV
                     KGSCPGGVKLLGNGEVTRKLNVKVDRASKAAVGKVVAAGGTVEV"
     gene            complement(1455..1649)
                     /gene="rpmD"
                     /locus_tag="VK429_01750"
     CDS             complement(1455..1649)
                     /gene="rpmD"
                     /locus_tag="VK429_01750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012536094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HLN90566.1"
                     /translation="MSGKLRITLVRGLSGHTAYHRKVVQGLGITRVNRPVVRQDTPEI
                     RWMVEKVKFLVRMEEVGEAS"
BASE COUNT          294 a          571 c          532 g          307 t
ORIGIN      
        1 atgttgtccg cgacgtcgac cggattgaac gtcaccgccg tgtagaagta gcagaagaag
       61 acgatgaacg cgacgaagag cacttcgtac ccgacgcttc ccggcgtgag ggcgttggag
      121 atcgactgcg tgatcgggtg cttgatgaag ctggcgatcg tcgcggggaa gagcaggatg
      181 gaggaggcga agatcggcgg tatgacgccg gccgtgttca ccttcagggg gaggtgggtg
      241 ctctgcccgc cgtagacctt ccgcccgacg attctgcggg catactgcac cgggatccgc
      301 cggtgcgccc gctcgaaata gatgatgacg gcgacgacgg cgaccatcag caccagcagg
      361 aacaggccgg aaaagatgtt catttccccc gttcgaacca gcgtgaccgt gcggaccagg
      421 ccgctcggga accgggccac gatgccggcg aagatgatga gggagatccc gttgccgatc
      481 ccacgctcgg tgatctgttc gccaagccac atcaggaacg ccgtccccgc ggtgagggtg
      541 atgatcgtca tgacccgaaa cgcccacccc gggtggtaga caacggatcc ggcccccgcg
      601 gtgacgcttt ccagcccgac ggcgatcccc gccccctgga tgacggagag gacgatcgtc
      661 ccgtaccggg tgtattgcgt gattttccgc cggccgagct ccccttcctt ggagagcttc
      721 tccaactgcg ggatgacgac cgtcagcagc tgaaggatga tcgaggaact gatatacggc
      781 atgatcccga gggtgaagat ggagaagcgc gcgagcgccc ccccggaaaa catgtcgatc
      841 aggccgaaga gcgtgcccgc ctgggcgtcg aacaccgcct tgagcgcgag gttgtcgatc
      901 cccggcgtgt ggacgtggat cccaatgcgg tagacgatca gcaggagccc cgtgatgaga
      961 atccgccgct tgagctcggg gacccgcgtt atgttctgga agccttcgag caccggatca
     1021 gacctccacg gtcccgccgg cggcgacgac cttcccgacg gccgccttgc ttgcccggtc
     1081 gaccttcacg ttgagtttcc gggtgacctc gccgttgccg agaagcttga cgccccccgg
     1141 gcaggaaccc ttcaccaggc cctcccgtcg aagcgcctcg atgtccacga cggagcccgc
     1201 cttgaaccgg ttcagttcct tcacgttgac gatggccatc tcctcccgga agacgttgac
     1261 gaacccacgc ttcgggagac gcctctggag aggcatctgc ccgccttcgt atccaggctt
     1321 ggtcccgccg ccgctgcgcg ccttgagccc cttgttcccc ttgccggagg tcttcccgag
     1381 ccctgagcct tcgccccggc cgacgcgctt gcgcgcggtt ttcgcccctt ttgcggggcg
     1441 gagatccgtg agtttcatga cgcctctccc acctcttcca tccggacgag gaacttgacc
     1501 ttctccacca tccaccggat ctccggtgtg tcctgccgga cgacgggacg gttcacccgg
     1561 gtgatcccga gcccctgaac gaccttccgg tggtacgcgg tatgcccgct caacccccgc
     1621 acgagcgtga tgcgcagttt tccgctcatg ccgtcgcctc ttcctctctc ggaccccgga
     1681 ccgcgaggat ctgtgccgct gtgc
//
LOCUS       DATGYW010000128         1582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_119237, whole genome shotgun sequence.
ACCESSION   DATGYW010000128 DATGYW010000000
VERSION     DATGYW010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119237"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..456
                     /locus_tag="VK429_01755"
     CDS             <1..456
                     /locus_tag="VK429_01755"
                     /inference="COORDINATES: protein motif:HMM:NF024245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HLN90567.1"
                     /translation="VPIQGSGESSGGKRRALLLLSLILLVWNACATGQRVFSIGLLPS
                     MDETGGSPALPSVPDGGPSVLSPESPRSGPLTIRQKYLLGKRVDINKASLEEISELPG
                     ISDKVAAAVLEERERLGRFRSHEDLLGVTGIKEKRLQKILPFLAEMPNN"
     gene            496..1176
                     /gene="cysE"
                     /locus_tag="VK429_01760"
     CDS             496..1176
                     /gene="cysE"
                     /locus_tag="VK429_01760"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015743281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HLN90568.1"
                     /translation="MFRSIRNDIKVIFERDPAARSVLEIFLCYPGFHAVRFHHLAHWL
                     WTHDLRVLGRFVSHISRTVTGIEIHPGATIGDGFFIDHGMGVVIGETSEIGNNVTLYH
                     GVTLGGTSWNKGKRHPTLEDNVIVGAGAAILGPIRVGHDSKIGSGSVVNKEVPPNSTV
                     VGIPGRVVYREGNVYNDPTGVAGTPDPEGKAIKCLTEQIFALEKRVEELAKRVEEAPE
                     PSAARTGT"
     gene            1173..>1582
                     /locus_tag="VK429_01765"
     CDS             1173..>1582
                     /locus_tag="VK429_01765"
                     /inference="COORDINATES: protein motif:HMM:TIGR00738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HLN90569.1"
                     /translation="MKITTRGRYAVMAMVSLAASSRGNPVPIQAIAKRESIPEPYLQQ
                     LFLRLRKQNIVKSVRGPGGGFILARDPSGITVGEIIRTAEGKPARVGCRQSGRACGMI
                     DRCRTQGMWDTLEARIEEFLDSMSVQDLFEERRET"
BASE COUNT          293 a          496 c          530 g          263 t
ORIGIN      
        1 gtgccgattc aggggagcgg ggagagtagc ggcgggaagc gacgtgccct cctcctcctt
       61 tccctgatcc tgctggtctg gaatgcgtgc gccacagggc agcgcgtttt ctcgatcggg
      121 cttctccctt cgatggacga gaccggcggc tctcccgctc tcccgtccgt ccccgacggc
      181 ggaccgtccg tcctttcccc tgaaagtccc cgaagcggac cccttacgat ccgtcagaaa
      241 tacctccttg gaaaacgggt agatatcaac aaggcttccc tcgaggagat ttcggaactc
      301 cccgggatct ccgacaaggt cgccgccgcc gtgctggagg agcgggagcg cctcgggcgg
      361 ttccggtccc acgaagacct tctcggcgtg acggggatca aggagaaaag gctgcagaaa
      421 atccttccct ttcttgcgga aatgccgaat aattgactta ttcggtcgta taatttctcg
      481 cggcagggag gaacgatgtt ccgatcaatc cggaatgaca tcaaggtcat cttcgagagg
      541 gaccccgccg cgcgcagcgt gctcgagatc ttcctctgct acccgggctt ccacgccgtc
      601 cggttccatc acctcgccca ctggctctgg acacacgatc tccgggtcct cggccgcttc
      661 gtttcccaca tctcgcgaac cgtcacgggg atcgagatcc acccgggagc gacgatcggc
      721 gacgggttct tcatcgatca cggcatgggg gtggtgatcg gcgagacgtc ggagatcggc
      781 aacaacgtca ccctgtacca cggcgtgacc ctgggcggga cgagctggaa caaggggaag
      841 cggcacccca ctctcgagga caacgtgatc gtaggggcgg gggcggcgat tctcgggccg
      901 attcgcgtag ggcacgactc gaagatcggc tccggatccg tggtgaacaa ggaggtgccg
      961 cccaattcga cggtcgtcgg gatccccggg cgcgtcgtct accgcgaagg gaacgtgtac
     1021 aacgatccga ccggcgtggc cggaacgccc gatccggaag ggaaggcgat caagtgcctg
     1081 accgagcaga tcttcgccct cgagaaacgg gtcgaggaac tggcgaagcg cgtcgaggag
     1141 gcgccggagc cctcggcggc gaggaccggg acatgaagat caccacccgg gggcgatatg
     1201 ccgtgatggc gatggtctcg ctggccgcgt cgtcgcgggg gaaccccgtg ccgatccagg
     1261 cgatcgcgaa acgggagtcg atccccgagc cctacctgca gcagctcttc ctgcgcctgc
     1321 gcaaacagaa catcgtgaag agcgttcgcg gccccggcgg cgggttcatc ctcgcccgcg
     1381 acccctcggg gatcaccgtg ggggagatca tccggacggc ggaaggaaag cccgcacggg
     1441 tcggatgccg gcagtcgggg cgcgcgtgcg ggatgatcga ccggtgccgg acgcagggga
     1501 tgtgggacac cctcgaggca cggatcgagg agttcctcga ttcgatgtcc gtgcaggacc
     1561 tgttcgagga gcgccgggaa ac
//
LOCUS       DATGYW010000129         2214 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_66181, whole genome shotgun sequence.
ACCESSION   DATGYW010000129 DATGYW010000000
VERSION     DATGYW010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2214)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2214)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2214
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66181"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(131..>2214)
                     /gene="pnp"
                     /locus_tag="VK429_01770"
     CDS             complement(131..>2214)
                     /gene="pnp"
                     /locus_tag="VK429_01770"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013707226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HLN90570.1"
                     /translation="VLVTACLSENPRPGIDFLPLVVDYVEKTSAVGKIPGGFFKREGR
                     LSEFEILTSRMIDRPIRPLFPKGFYNEIQIVATVLSADKENDTGILAMIGASAALSIS
                     EIPFAGPIAGARVGRIDGKLVVNPVLPDFERSDLNIFVAGSRDAILMVEGGSNEVSEE
                     EVLDAILFAHRSLVPILDLQERMAREIGKEKRIFEKKVLPEEDLRKIASIAEGPLAEA
                     YVLREKQERRKRIEEIGESVRTAFTDEERAEKGALIADALKSLEKKFVRGTILRERKR
                     IDGRGLKDVRAISCEIGVLPRTHGSAVFTRGETQALVMATLGTSQDEQRIDSIMGDTT
                     KSFMLHYNFPPFSVGEVKMLRGPGRREVGHGALAERAVSKVLPKNVDFPYTVRVVSEV
                     LESNGSSSMATVCGASLAMMDAGVPTSGAVSGIAMGLIKEGDDVAVLTDILGDEDHLG
                     DMDFKVAGTKNGVTAIQMDIKIGGVSREIMLSALKQAREGRLHILERMNAAIDTHRPD
                     LSPYAPRIYVMMVKTDKIREIIGPGGKIIRGIQEQTGVKIDIDDDGTVKIAAVNADSA
                     RAAISIIEGITQSAEVGKVYEGRVRKIMDFGAFVEIFPGTDGLLHVSQISKHRVNVAD
                     CFKEGDDVTVRVLEVDRDGKIRLSHKEFEEEGRFPEATGPPPGQDRDKEKGEPGRDRG
                     RDGGRGGRGRR"
BASE COUNT          337 a          763 c          699 g          415 t
ORIGIN      
        1 cccagatccc cacggtggcg gaccgcagcc aggggacctg ttcggtgacg atggcgacgc
       61 cgttgtcgag gagggtgcgg gcgaccgtca tcgacgtcgg ccgtctaccg cggcgttccg
      121 aaacgccgca ctaccggcgt ccccttcccc cgcggccgcc gtcccgcccg cgatcccgcc
      181 cgggttcgcc cttctccttg tcccggtcct gtcccggcgg gggacccgtg gcctcgggga
      241 accgcccctc ctcctcgaac tccttgtggg agagccggat cttcccgtcc cggtccacct
      301 caagtacgcg gacggtgacg tcgtccccct ccttgaagca gtcggcgaca tttacccggt
      361 gcttcgatat ctgggaaacg tggagcaggc cgtcggtgcc ggggaagatt tccacgaagg
      421 cgccgaaatc catgatcttg cgcacccttc cctcgtacac ctttcccacc tcggcgctct
      481 gcgtgatccc ctcgatgatg gagatggccg cccgcgccga gtcggcgttc accgcggcga
      541 tcttcacggt gccgtcgtcg tcgatgtcga tcttcacgcc cgtctgttcc tggatcccgc
      601 ggatgatctt tcctcccggg ccgatgatct cccggatctt gtcggtcttc accatcatca
      661 cgtagatccg cggagcgtac ggggagaggt cggggcggtg cgtgtcgatc gcggcgttca
      721 tcctctccag gatgtggagc cggccctcgc gggcctgctt cagggcggag agcatgattt
      781 cgcgactgac gccgccgatc tttatgtcca tctggatggc ggtcacgccg ttcttcgtcc
      841 ccgccacctt gaagtccatg tcgccaagat ggtcctcgtc cccgaggatg tccgtcagaa
      901 ccgcgacatc gtcgccctcc ttgatgagcc ccatcgcgat gccggagacg gctccggagg
      961 tcgggacccc ggcgtccatc atcgcgaggg acgccccgca caccgtggcc atggaggagg
     1021 acccgttgga ctcgaggacc tcggaaacga cgcgcaccgt gtaggggaag tcgacgttct
     1081 tcggcagcac cttcgacacg gcgcgctcgg cgagcgcccc gtgtccgacc tcccggcgtc
     1141 cgggaccgcg gagcatcttg acctcgccga cgctgaaggg agggaagttg taatgaagca
     1201 tgaacgactt ggtggtgtcc cccatgatcg agtcgatccg ctgctcgtcc tgcgacgtcc
     1261 cgagggtcgc catgaccagg gcctgcgtct cgccccgggt aaagacggcg gagccgtgcg
     1321 tgcgggggag aacaccgatc tcgcaggaga tggcgcggac gtctttcagc ccgcggccgt
     1381 cgatccgttt cctctcccgg aggatcgtcc cgcggacgaa cttcttttcc aggcttttca
     1441 aggcgtctgc gatcagcgcc cccttctccg cgcgctcctc gtcggtgaag gcggtgcgaa
     1501 ccgactcgcc aatctcctcg atccgcttgc gccgttcctg cttctcccgg aggacgtacg
     1561 cctccgcgag gggaccctcc gcgatcgacg cgatcttccg aaggtcctcc tccgggagga
     1621 ccttcttctc gaagatgcgc ttctccttgc cgatctcccg cgccatccgc tcctggaggt
     1681 cgaggatcgg caccagcgac cggtgcgcga agaggatcgc gtcgagcacc tcctcctcgg
     1741 acacctcgtt cgatccaccc tcgaccatca ggatcgcgtc gcggcttccg gcgacgaaga
     1801 tgttcaggtc gctccgctcg aagtcgggaa ggacggggtt gaccaccagc ttcccgtcga
     1861 tgcggcctac ccgcgccccg gcgatcggcc cggcaaaggg gatctcggag atcgagagcg
     1921 cggccgaggc cccgatcatg gccaggatcc cggtgtcgtt ttccttgtcc gcggacagaa
     1981 cggtggcgac gatctggatc tcgttgtaga accctttcgg gaaaagagga cggatgggcc
     2041 ggtctatcat ccgggaggtg aggatctcga actcggagag cctcccctcg cgcttgaaga
     2101 agcccccggg gatctttccg accgcggagg ttttctccac gtagtcgacg accagtggaa
     2161 ggaagtcgat gcccggacgg gggttctcgg agaggcaggc ggtgaccagc acca
//
LOCUS       DATGYW010000130         1771 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_119263, whole genome shotgun sequence.
ACCESSION   DATGYW010000130 DATGYW010000000
VERSION     DATGYW010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119263"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..360
                     /gene="mraW"
                     /locus_tag="VK429_01775"
     CDS             <1..360
                     /gene="mraW"
                     /locus_tag="VK429_01775"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015723408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytosine(1402)-N(4))-methyltransferase"
                     /protein_id="HLN90571.1"
                     /translation="VSSAIPRRAWPRDIHPATRVFQALRIAVNGELASLGAFLDGILR
                     HLSPGGRVAVISFHSLEDRMVKTAFRRPVSGLGEDEPAFERLTRKPVVPSEREARENP
                     RARSAKLRVARRRDGGD"
     gene            362..694
                     /locus_tag="VK429_01780"
     CDS             362..694
                     /locus_tag="VK429_01780"
                     /inference="COORDINATES: protein motif:HMM:NF016860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HLN90572.1"
                     /translation="MRRIIVGNGLCMITEIRKEPPAVPAVPRRRGFAALFLALLVTGL
                     FNVWLSGQCIRTGYRVSSALEEKRTLQKEQEVLRLEALALKSPARIHSIARNDLHMVP
                     AQMDRVIR"
     gene            696..>1771
                     /locus_tag="VK429_01785"
     CDS             696..>1771
                     /locus_tag="VK429_01785"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HLN90573.1"
                     /translation="MTSRARLILGGLLFLYVLVVLRAFQIQVLGVREIRDRGAKQYCS
                     TIPLIPKRGVILDRTGTELAVSVATKSIFVQPAKLRDPKKAADLLAPRVSRSAAELRK
                     LFAGEKGFVWVRRQMPSTAAEEAVKEVKQALCTLDPEANGRPSAIDGIGTVEEPKRFY
                     PNRELAASVVGFTNLDSEGMEGVELSLNKYLQGERGGLLCERDARGRLIVPATTPVEV
                     NSKGHSVALTIDRNIQHVAESELQAAVEKYNARGSMAVVLSPGTGEILAMATAPSFNP
                     NAAGDSPAGARKNRSLTDSFEPGSTFKVFTLASALELGAVSATDRFFCENGAYHYAGK
                     VIHDTHRYGWLTVPDVVKFSSNIG"
BASE COUNT          296 a          578 c          608 g          289 t
ORIGIN      
        1 gtttcctcgg cgattccccg gagggcctgg ccacgggaca ttcaccccgc cacgagggtg
       61 ttccaggcgc tgcggatcgc tgtgaacggg gagcttgctt ccctcggcgc gttcctcgac
      121 gggatcctcc ggcacctttc cccggggggg cgggtggcgg tgatcagttt ccactcgctg
      181 gaggatcgca tggtgaaaac ggcgttccgg cgacctgttt ccggtctggg agaagacgag
      241 ccggcgttcg aacggttgac ccgcaaaccg gtcgtcccgt ccgaacggga agcgcgggaa
      301 aacccgaggg cgcgcagcgc gaagcttcgc gtggcgcgcc ggcgcgatgg aggagactga
      361 catgagaagg atcatcgttg gaaacggcct ttgcatgatc acggagatcc ggaaggagcc
      421 cccggcggtc cctgcggtcc cccggcggcg cggattcgcc gcgctgttcc tggcccttct
      481 cgtaaccggc ctgttcaacg tctggctgtc gggccagtgc atccggacgg ggtaccgggt
      541 ctcctccgct ctcgaggaga agcgcactct ccagaaggag caggaggttc tgcggctgga
      601 ggcgcttgcg ctgaagagcc ccgcccgcat ccactccatc gcccggaacg acctgcacat
      661 ggtgcccgcg cagatggatc gggtgatccg gtgagatgac ttcccgcgct cgcctcatcc
      721 tcggcggact tctcttcctc tacgtcctcg ttgtgctgcg ggcgttccag atccaggttc
      781 tcggggtcag ggagatccgt gatcgcggcg cgaagcagta ctgttccacc atccccctca
      841 tccccaagcg gggtgtgatc ctggaccgga ccggaacgga gctcgcggtg agcgtcgcca
      901 cgaagtcgat cttcgtccag ccggcgaagc tccgggatcc taagaaggcg gccgacctcc
      961 tcgccccccg ggtgtcccgc tccgccgcgg agctccggaa gctgttcgcc ggggagaagg
     1021 ggttcgtgtg ggtacgacgt cagatgccct ccaccgccgc cgaggaagcg gtgaaagaag
     1081 tgaagcaggc gctctgcacg ctcgaccccg aagccaacgg gaggccgtcg gcgatcgacg
     1141 gcatcggaac cgttgaggag ccgaagcggt tctacccgaa ccgggaactg gccgcgtccg
     1201 tcgtaggctt taccaacctg gacagcgagg ggatggaggg agtcgagctc tccctgaaca
     1261 agtacctgca aggcgagcgg ggggggctcc tctgcgagcg ggacgcgcgg ggccgcctca
     1321 tcgttcccgc gacgacgccg gtggaggtga attccaaggg acattcggtc gccctcacga
     1381 tcgatcggaa catccagcac gtcgccgaga gcgagctcca ggcggcggtg gagaagtaca
     1441 acgcccgcgg cagcatggcc gtggttctgt cccccggaac gggggagatc ctcgcgatgg
     1501 cgacggcgcc gtcattcaac ccgaacgccg ccggggactc ccccgcgggg gcgcggaaga
     1561 accgttccct gaccgacagc ttcgagcccg gatcgacctt caaggtcttc acccttgcgt
     1621 cggccctcga gctcggggcg gtgagcgcca cggaccggtt cttctgcgag aacggggcct
     1681 accactacgc ggggaaggtg atccacgaca cgcatcggta cgggtggctc accgtgccgg
     1741 acgtggtcaa gttctccagc aacatcggca t
//
LOCUS       DATGYW010000131         2556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_440421, whole genome shotgun sequence.
ACCESSION   DATGYW010000131 DATGYW010000000
VERSION     DATGYW010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2556
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440421"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..477)
                     /locus_tag="VK429_01790"
     CDS             complement(<1..477)
                     /locus_tag="VK429_01790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2779 domain-containing protein"
                     /protein_id="HLN90574.1"
                     /translation="MSSPDKNLNLSKSLYTRGLQCHKSLYLHKYRPELRGEPTPELEA
                     LWKSGHEVGDFAHMLFPGGVNVPFDGLTKEEQLAKTREEIDRGTKAIYEATFSFDSVF
                     VKADIIVRNRGYWDLYEVKSSTSVKAHHWDDVAVQYYVLSGCGLPINKAYLVHINNG"
     gene            607..1026
                     /locus_tag="VK429_01795"
     CDS             607..1026
                     /locus_tag="VK429_01795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HLN90575.1"
                     /translation="MKSYRKELWFNVPARRAFVNITPQVEACLRESGIREGLLLCNAM
                     HITASVFINDDESGLHDDYERWLERLAPHEPVSQYLHNRTGEDNGDAHLKRQVMGREV
                     VVAITGGKFDFGPWEKIFYGEFDGGRRKRVLVKVIGE"
     gene            1278..1772
                     /locus_tag="VK429_01800"
     CDS             1278..1772
                     /locus_tag="VK429_01800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90576.1"
                     /translation="MIKVKSFTSQLKIFHARHELDELDKEVGDFIASRGIRKVISISD
                     SSTTGNSGETIGLIRVLAYEEPVAGSREHYQEQIESTLNEWGEEIEKIRKKADKLGAD
                     ARGKYREQIEDLRAKQEAARKKLEDLKRTSGEAWEDLRNGAEAAIDELKKGVEGAVAK
                     IKKG"
     gene            complement(1881..>2556)
                     /locus_tag="VK429_01805"
     CDS             complement(1881..>2556)
                     /locus_tag="VK429_01805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HLN90577.1"
                     /translation="SPIPFAEGYVVPREMTEAEMGRVREAFVAAARHGLEAGFDVIEV
                     HMAHGYLLHEFLSPLTNRRTDAWGESLENRLRFPLSVARAVREEWPERLPVLVRVSAT
                     DWVEGGWDLPQTIVLARELKKIGIDMVDCSSGGTVPDAKITAGPGFQTPFAAAVRREA
                     GIATGAVGMITEPAQAEQIVATGMADAVMIARGFLRDPYWPLHAARSLGVDMTWPHQY
                     ERAKPL"
BASE COUNT          576 a          716 c          783 g          481 t
ORIGIN      
        1 gccattgttg atgtgcacga gatacgcctt gttgatgggg agcccgcacc cggagagaac
       61 gtaatactgg accgcgacgt catcccagtg atgcgccttc acggaggtgg agctcttcac
      121 ttcgtacagg tcccaatagc cccggttccg gacgatgatg tccgccttca cgaagacgct
      181 gtcgaaggag aaggtcgcct cgtagatggc cttcgtgccg cggtcgatct cctcgcgggt
      241 cttcgccagc tgctcttcct tcgtcagtcc gtcgaagggg acgttcactc ccccgggaaa
      301 cagcatatgc gcgaaatcgc cgacctcgtg cccgcttttc cagagcgcct cgagctcggg
      361 cgtcggttcc ccccggagtt ccggccggta tttgtggaga tacagggatt tgtggcactg
      421 gagcccacgg gtgtagagcg acttgctcag gttgaggttc ttgtctggcg aggacattga
      481 ctctccttca ggtggtatca gacagggttg ggctatgtcg gcttgccgcc cgtgccgtat
      541 tccatcctcc cggtttcaat aaccggtggt ttccaatatc ctaaaccaac agtgaggagg
      601 tggttcttga aaagctatcg aaaagagctt tggttcaacg ttcccgccag gcgggcattc
      661 gtcaacataa cccctcaagt cgaggcgtgt ctgcgggaaa gcggaatcag ggaaggactt
      721 ctgctttgca acgcgatgca tatcaccgca tccgtcttca tcaacgacga cgagagcgga
      781 ctccacgatg actatgagcg atggctggaa cggctcgcac cccacgaacc ggtatcgcag
      841 tacctccaca accggacggg cgaggacaac ggggacgcgc atctcaaacg ccaggtgatg
      901 gggcgcgagg tggtggtggc gatcacgggc gggaagttcg acttcggtcc gtgggagaaa
      961 atcttctatg gcgagttcga cggagggcgg cgtaagcggg tgctggtcaa ggtcatcggc
     1021 gagtgagtct tcggcccaac ggtcggccca ttaaggggaa cgtgaagccg aaaatggggt
     1081 gtgccctgcc gtcgtggaag ccggcgtaag cggtttttca gggatcgacc ttcggggttc
     1141 gcacacgact ccacgctcca tcatcggacg cttcaggtac gcgtatcgcc ttcgatgcgg
     1201 aatatggggt agcattcata taagggattg aaacgcataa atcccttatg agacctggaa
     1261 agggggaaac ttccgccatg atcaaggtga aatcttttac ctcccagctc aagatctttc
     1321 atgcgcgtca cgaactcgac gaactggaca aagaggtcgg cgacttcatc gcatcccgtg
     1381 ggatcaggaa agtaatctcc atcagcgatt catccacgac ggggaattcg ggggaaacca
     1441 tcggcctgat acgggtgttg gcatacgagg aacccgtagc cggatccagg gaacattacc
     1501 aggaacagat cgaatccaca cttaatgaat ggggcgaaga gatcgaaaag atccgaaaga
     1561 aggccgacaa attgggcgcg gatgccagag gcaaataccg ggagcagatc gaagacctgc
     1621 gcgccaaaca ggaagcggca aggaaaaaac tggaggacct gaagagaacc agcggagagg
     1681 cgtgggagga tcttcggaac ggtgcggaag cagccatcga cgaactgaaa aagggcgtgg
     1741 aaggagccgt cgccaaaatc aaaaaaggct gacccggacc cggatcgggt ccgcgggatt
     1801 cggaacggct cagccaggat atgaaacaag agaggggatg catagaccac gtaccacacg
     1861 ctcgtttgct ggaattacga tcacaaaggc ttcgcccgct cgtattgatg aggccacgtc
     1921 atgtcgactc cgagactgcg ggcggcatgg agaggccagt atggatcccg aaggaatccc
     1981 cttgcgatca tgacggcatc cgccatccct gttgcaacga tctgctcggc ctgcgctggt
     2041 tcggtgatca tgccgacggc gcctgtcgcg atgcccgctt cccgacgaac ggcggcggcg
     2101 aagggtgtct gaaatccggg acctgcggta atctttgcat cgggaacggt tcctccgctg
     2161 gaacagtcga ccatgtcgat gccgatcttc ttcagttccc gcgccagcac aatcgtctgt
     2221 ggaaggtccc acccaccctc gacccagtcc gtggcggaaa cacgaaccag caccggcagt
     2281 ctttccggcc actcctcgcg cacggcgcgg gccacggaaa gagggaatcg gaggcgattc
     2341 tcaaggcttt cgccccaggc atccgttctc cggttggtca agggggacag gaattcatgc
     2401 aggaggtaac catgcgccat gtgaacctcg atgacatcga agcctgcctc cagaccgtgg
     2461 cgggccgcgg cgacaaacgc ctcgcgaacg cgacccatct ccgcctctgt catttcccgg
     2521 gggacaacgt atccctcggc gaacgggatc ggactg
//
LOCUS       DATGYW010000132         2265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_386625, whole genome shotgun sequence.
ACCESSION   DATGYW010000132 DATGYW010000000
VERSION     DATGYW010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386625"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..947)
                     /locus_tag="VK429_01810"
     CDS             complement(<1..947)
                     /locus_tag="VK429_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HLN90578.1"
                     /translation="MKVLALDNLQKVGLDVFTKEGIEVDVKGKMTPEELTAVINQYDA
                     VVVRGATKATAACFENASRIKVIGRAGSGTDNIDKVAATKKGVVVMNTPGGNTVTTAE
                     HALSMMMALSRQIPQATASMKAGKWEKNKFMGTEITDKVLGVVGLGAIGKVVADRALG
                     LKMVVVAFDPYVSKEDGSRLGVEMATLDELYARADYITYHTPLTPETKGMVNAATIAK
                     MKDGVRIINCARGALVDEADLLAALQSGKVAGAAIDVFPTEPPPPDMPLLAHPNVILT
                     PHLGAATTEAQEKVAVLIAEQICDFLKKGTIRNSVNFPSV"
     gene            1120..2244
                     /gene="serC"
                     /locus_tag="VK429_01815"
     CDS             1120..2244
                     /gene="serC"
                     /locus_tag="VK429_01815"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012526713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HLN90579.1"
                     /translation="MKRTINFNAGPAALPLPALERARDEFLDFAGSGMSVMEHSHRGK
                     EYEAVHDEAIALVRELLGVPESYEVLLLQGGATALFALIPLNFLEKGKTARYVVTGAW
                     GQKALGEAKLVAGMAGAETAAWNLGVGEGKEKSHTRVPAPSEVKVEAGDAYLHITSNE
                     TIHGVEFNVDPSRAFPATGAVPLIADMSSDFLWRPFDVTKFGMVYAGAQKNIGPSGVV
                     VAVVSKELLDRGRKDIPKIFQFRTHAENKSLYNTPPTFGVYMVRNVLSWLKGQGGLAG
                     MEKVNRKKAARLYGVIDGTAEFFRSPVERESRSVMNVVFRLPTPELEERFIAEAKKQG
                     MIGLKGHRSVGGIRVSIYNAVPYEWVEMLAVFMEAFARSK"
BASE COUNT          395 a          724 c          730 g          416 t
ORIGIN      
        1 acggacggga agttcacaga gttgcggatc gtccccttct tcaggaaatc gcagatctgc
       61 tcggcgatca gcaccgccac cttttcctgg gcctccgtcg tcgcagcgcc caggtgcggc
      121 gtcaggatca cgttggggtg cgccagcagc ggcatgtccg gcggaggggg ctccgtcggg
      181 aagacgtcga tcgccgcccc ggcgaccttc cccgactgga gggccgccag aaggtcggct
      241 tcgtccacaa gggcgccgcg ggcgcagttg atgatccgca cgccgtcctt catcttcgcg
      301 atcgtggcgg cgttcaccat ccccttcgtc tccggcgtga gcggggtgtg gtacgtgatg
      361 tagtcagccc gggcgtagag ctcgtcgagg gtcgccatct cgacgccgag gcgcgatccg
      421 tcctccttcg acacatacgg atcgaaggcg accacgacca tcttgagccc cagcgcgcgg
      481 tccgccacga ccttcccgat ggctccgagg ccgacgacgc cgaggacctt gtcggtgatc
      541 tcggtgccca tgaacttgtt cttttcccac ttccccgcct tcatcgaggc ggtcgcctgc
      601 gggatctgtc gggagagcgc catcatcatc gagagggcgt gctcggcggt cgtgacggtg
      661 ttgcctccgg gggtgttcat cacgaccacg ccctttttgg tggcggcgac cttgtcgata
      721 ttgtccgtac cgctgccggc gcgtccgatc accttgatcc gcgaggcgtt ctcgaagcac
      781 gccgccgtgg ccttcgtggc gccgcggacg acaacggcgt cgtactggtt gatgaccgcc
      841 gtcagctctt ccggcgtcat cttccccttc acgtcgacct cgatcccttc cttcgtgaac
      901 acgtcgagac cgaccttctg caggttgtcc agcgcgagca ctttcatccg cgttttctcc
      961 tgttttccgg ttcgttggtg atccaaggaa aatgcaactg cattacctat caaagggatg
     1021 cgtaaaagtc aatctcggga agcgcagaaa acccttgaag gcgcgcgcgg accttgcgag
     1081 aatgcggagg actaaattcc tgcccgctgg aggacaccca tgaaacgaac gatcaatttc
     1141 aacgccggac ccgccgccct tccccttccc gcgctggagc gtgcccgcga cgagttcctc
     1201 gacttcgcgg gaagcggcat gtcggtgatg gagcacagcc atcgcgggaa ggagtacgag
     1261 gcggtccacg acgaggcgat cgccctcgtc cgggaacttc tcggcgtacc cgaatcgtac
     1321 gaagtcctgc tgctccaggg aggagcgacc gcgctcttcg cgctgatccc cttgaacttc
     1381 ctcgaaaagg ggaagacggc ccggtacgtc gtcaccggcg cctggggtca gaaggcgctg
     1441 ggcgaggcaa aactcgtcgc ggggatggcc ggcgccgaga cggccgcctg gaatctcggg
     1501 gtcggcgaag ggaaggagaa gagccacacc cgcgtgccgg ctccttccga ggtgaaggtc
     1561 gaggcgggcg acgcctacct gcacatcacc tccaacgaga cgatccacgg tgtcgagttc
     1621 aacgtcgacc cgtcccgcgc gttccccgcc acgggggccg tgccgctgat cgcggacatg
     1681 tcgagcgact ttctctggcg tccgttcgac gtgacgaagt tcggcatggt ttacgccggc
     1741 gcccagaaga acatcggccc gtccggcgtg gtggtcgcgg tggtgtcgaa ggaactcctc
     1801 gaccgggggc ggaaggatat cccgaagatc ttccagttcc gcacccacgc cgagaacaag
     1861 tcgctctaca atacgccgcc caccttcggc gtctacatgg tccgcaacgt cctctcctgg
     1921 ctcaagggac agggagggct cgccgggatg gagaaggtca accggaagaa ggcggcgcgc
     1981 ctctacggcg tcatcgacgg aaccgcagaa tttttccggt cgccggtgga gcgggagagc
     2041 cgctcggtga tgaacgtggt tttccggctc ccgacccccg agctcgagga gcggttcatc
     2101 gccgaggcga agaagcaggg gatgatcggc ctcaagggac accggtccgt cgggggaatc
     2161 cgggtttcga tttacaacgc cgttccgtac gaatgggtgg agatgctcgc cgttttcatg
     2221 gaggcgttcg cgcggtccaa ataagaggca cccgaggaga tgaag
//
LOCUS       DATGYW010000133         1661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_490428, whole genome shotgun sequence.
ACCESSION   DATGYW010000133 DATGYW010000000
VERSION     DATGYW010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490428"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..648
                     /locus_tag="VK429_01820"
     CDS             <1..648
                     /locus_tag="VK429_01820"
                     /inference="COORDINATES: protein motif:HMM:NF042697.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6599 family protein"
                     /protein_id="HLN90580.1"
                     /translation="GSEVRLELFRMASPRDAYGIWSQYRYPDQEVLRIPPSEAIVSDT
                     SADFFRGETFVRIRSKPGDGSRNDVVGIASEIVALLSGSGAPPEDAKALDGLPGRVSG
                     SILYQKRAMLGYECLGPGFEAKFSTASSSGHYLLLPPAADGGAGRKARLARELPAYRE
                     VNPALSVARIPSGNLWMTSEGGCVLAVAGKISAEQAAPLLSSFARRLQGICRPTP"
     gene            676..1218
                     /locus_tag="VK429_01825"
     CDS             676..1218
                     /locus_tag="VK429_01825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006217107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HLN90581.1"
                     /translation="MPIKSGFMILAALGSILLVAGCHWGSKPAAPPLAVVPGVDLTRY
                     AGKWYEIAKYPNRFQRGCVGATAEYTLSDDGTRVDVVNRCRDAESGKEKSVRGKARVV
                     DPATNAKLSVTFFWPFSGDYWILALGEEYEYAVVGTPDRNYLWFLARTPSIGDDLYGR
                     LVDLARERGFDPARIERSAQ"
     gene            1256..>1661
                     /locus_tag="VK429_01830"
     CDS             1256..>1661
                     /locus_tag="VK429_01830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012469451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HLN90582.1"
                     /translation="MTPSVLREVQRLPISLPEAWTFFSDPRNLPRITPPSLGLEPTSD
                     LPVRMYPGMIVTYRVRPIPWVSVGWVTEITHVREPSLFVDEQRFGPYRFWHHEHHFRE
                     IEGGVEMEDIVHYALPLGKVGKVFGGPLVRRRL"
BASE COUNT          241 a          553 c          566 g          301 t
ORIGIN      
        1 ggttcagagg ttcgactgga gctgttccgg atggcctccc cccgggacgc ctacgggatc
       61 tggtcccaat atcggtaccc ggaccaggag gttctccgga ttcccccctc ggaggcgatc
      121 gtctccgaca cgtcggccga cttcttccgg ggcgaaacgt ttgtgcgcat ccgttcgaag
      181 cccggtgacg gctcccggaa cgacgtcgtc gggatcgcct cggaaatcgt tgcgcttctc
      241 tccgggagcg gcgctccgcc ggaggatgcg aaggcgctgg acggcctgcc ggggagggtc
      301 tccggatcga tcctctacca gaaacgggcg atgctggggt acgagtgcct gggcccgggc
      361 ttcgaggcga agttctccac cgcctcctcc tccggccact acctgctgct tccgcccgcg
      421 gcggacggcg gcgccgggcg gaaggcgcgc ctcgcgcggg agctccccgc ataccgggag
      481 gtgaatccgg ccttgtccgt cgcacggatc ccttccggca atctgtggat gacctcggag
      541 ggcggttgcg tcctcgccgt ggcggggaag atctccgcgg agcaggccgc gccgctcctt
      601 tcgtccttcg cgcgacgttt gcaggggatc tgccgtccca ccccttgact cttgtgcgta
      661 cggaaaggaa cgcagatgcc gatcaaatcc ggtttcatga tccttgccgc actcggttcg
      721 atcctccttg tcgcggggtg ccattggggg tccaagccgg ccgcgcctcc cttggcggtc
      781 gtcccgggcg tcgatctcac ccggtacgcc gggaagtggt acgagatcgc gaagtacccg
      841 aaccggttcc agcggggatg cgtcggcgcc acggcggagt acaccctctc ggacgacggg
      901 acccgggtcg acgtggtgaa ccggtgccgg gacgccgaat ccggcaagga aaagtcggtc
      961 cgggggaaag cgcgggtcgt cgatcccgcg acgaacgcga aactctcggt caccttcttc
     1021 tggccgttct ccggcgacta ctggatcctc gcgctggggg aggagtacga atacgcggtc
     1081 gtcgggaccc ccgaccggaa ctacctctgg ttccttgcgc gcacgccgtc gatcggggac
     1141 gatctctacg gacgtctcgt tgacctggcg cgggagcgtg ggttcgatcc ggcccggatc
     1201 gagaggtcgg cgcagtgatc aagttgccgg attcgcggga tcggagaggg gcgggatgac
     1261 gccgtccgta ttgcgggaag tgcagcgcct cccgatctcc ctcccggagg catggacctt
     1321 cttctccgac ccgcggaatc tgccgcggat cacgcccccc tctctcgggc tcgaaccgac
     1381 ctccgacctt ccggtcagga tgtatccggg gatgatcgtc acgtaccgcg tccggccgat
     1441 cccgtgggtc tccgtggggt gggtcacgga gatcacccat gtccgggagc cgtcgctgtt
     1501 cgtcgacgaa cagcggttcg gaccgtaccg gttctggcac cacgagcacc atttccggga
     1561 gatcgaaggg ggcgtcgaga tggaggacat cgtccactac gccctccctc tcggcaaggt
     1621 cggcaaggtg ttcgggggcc ccctggtccg tcgccggctc c
//
LOCUS       DATGYW010000134         1596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_66548, whole genome shotgun sequence.
ACCESSION   DATGYW010000134 DATGYW010000000
VERSION     DATGYW010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66548"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(310..1248)
                     /locus_tag="VK429_01835"
     CDS             complement(310..1248)
                     /locus_tag="VK429_01835"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HLN90583.1"
                     /translation="MRNRHFMLLVSILLATFLVAGCNSPYRALTKGETDQVSAISKKI
                     TEAEGMTPKSAKVCAPKELAAAYVNLDVARHEATENWERAQPYFDTANKSSDVVVAKT
                     KACQPPIVKYSAAPAEIAPGQCSTLTWSLQNTQKAEIDQEVGAVPASGSKQVCPTKTT
                     DYILTATGTGGTVSETATVTVKAPPPKAAVVAPVAAPKAAEEVTLHVNFDTNKYKIRP
                     ADLAELQKAVDFAKKNPDAKFHVVGYTDSRGSDKHNQKLSENRAEAVKKYLVGEAIAP
                     EKITSEGKGSADPVGDNKTKEGQFQNRRVVLKIVSK"
     gene            complement(1245..>1596)
                     /locus_tag="VK429_01840"
     CDS             complement(1245..>1596)
                     /locus_tag="VK429_01840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90584.1"
                     /translation="INAIAAKFLLRKPSEKEELEMKRPCVVLLAVVLCAGLMVAGCAT
                     SRGIKNAQAQLEKAKAAGAENSAAFEYYTAEAYLGQAVRQSKEGDNKQAKIFTKQSTD
                     YSAKALGMAKGGAK"
BASE COUNT          253 a          518 c          444 g          381 t
ORIGIN      
        1 gcccgctgga tagcccggat gagctctgcc ttctccatcc gcgtcgagcg gattcccaac
       61 tgccgcgcga tgtcgcggat ctccgtcatg gtcggcatga cgcacctcct cggtcccgca
      121 ggttcccggt cgcgcctcgc ccttgattgc ttccagtata taccttcctc ccggaggggt
      181 cgaaccccgc ccgtttcctc cggctggccg ggccgcgatc gggggaatcg gaaaaaaaaa
      241 ccggcacggc gtcccccagt accccggagt gcgccgtgcc ggaaaaaccc ggaccgttgc
      301 cttgatccgt tatttactta ctatcttcag caccactctg cggttctgga actggccttc
      361 cttcgtcttg ttgtccccga cgggatcggc tgaacctttc ccctccgagg tgatcttctc
      421 gggtgcgatg gcctcgccca cgagatattt cttcacggcc tccgctctgt tctcggacag
      481 cttctggttg tgcttgtcgc tgccacggga gtccgtatac cccaccacgt ggaatttggc
      541 gtccgggttc ttcttcgcga aatcgaccgc cttctgcagc tccgcgaggt ccgccggccg
      601 gattttgtat ttgttcgtgt cgaagttgac gtgaagggtt acctcctcgg ctgccttggg
      661 agcggcgacg ggagccacta ccgcggcctt aggaggaggg gccttcaccg tgacggttgc
      721 cgtctcggaa acggtcccac cggtcccggt cgcggtcaag atgtaatcgg tggtcttggt
      781 ggggcacacc tgcttggaac cgctcgccgg cacggctccc acctcctgat cgatctccgc
      841 cttctgcgta ttttgcaaag accacgtcag ggtcgagcac tgtccggggg caatctccgc
      901 cggggccgcc gaatatttca cgatgggagg ttgacacgcc ttcgtcttgg caacgaccac
      961 atcggaggat ttattcgcag tgtcgaaata gggctgggcc ctctcccaat tctcggtcgc
     1021 ttcgtgccgg gcaacgtcaa ggtttacata agcggcagcc agttccttgg gggcgcatac
     1081 cttggcgctc ttgggcgtca tcccctccgc ctcggtgatc ttcttcgaga tggcactgac
     1141 ctggtccgtt tcacccttcg tcagggcgcg ataggggctg ttgcagccgg ccaccaggaa
     1201 tgtcgcgagg agaatcgaca cgaggagcat gaaatgccgg ttcctcattt cgcacctccc
     1261 ttggccatcc ccagcgcttt ggcggaatag tctgttgatt gcttcgtgaa gattttggcc
     1321 tgcttattat ctccttcttt cgactgcctt actgcttgcc cgaggtacgc ttccgccgtg
     1381 taatactcga acgccgcact attctcggct ccagccgctt tcgctttctc caactgcgcc
     1441 tgagcgttct tgatccccct ggacgtcgcg cagccggcca ccatcaggcc ggcacacagg
     1501 acgaccgcca acaacacaac acacggtcgc ttcatctcga gctcctcctt ttcagatggt
     1561 tttcgcaaaa ggaattttgc ggcgatggcg ttgata
//
LOCUS       DATGYW010000135         1650 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_386888, whole genome shotgun sequence.
ACCESSION   DATGYW010000135 DATGYW010000000
VERSION     DATGYW010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386888"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..529)
                     /locus_tag="VK429_01845"
     CDS             complement(11..529)
                     /locus_tag="VK429_01845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2127 domain-containing protein"
                     /protein_id="HLN90585.1"
                     /translation="MDRLAGETRQRGLRVVAVFEGAKGGLVLITGFGVLAFIHQGLHD
                     AVEELVRHLHLNPARHYPRIFLDAVARVTDTQLWLLALSAFLYVVVRFIEAFGLWHRK
                     RWAEWFGALSGGVYIPVELFELARGFSWVKLMVLAVNLAIVAYLGYELRTQGRRPRNP
                     SLPNVPGPSRKT"
     gene            complement(583..696)
                     /locus_tag="VK429_01850"
                     /pseudo
     CDS             complement(583..696)
                     /locus_tag="VK429_01850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045489.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
     gene            complement(699..>1650)
                     /locus_tag="VK429_01855"
     CDS             complement(699..>1650)
                     /locus_tag="VK429_01855"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: protein motif:HMM:NF013915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HLN90586.1"
                     /translation="DDFLLLPGFVRRRNCRDPSSPRERTESPHIIRSMIPYFPQPSYH
                     LFGPLTVHAFGTIVAVAVIVGWRMVVARTRAKGLDPELVQDLLSYVLLSGFVVAHLYS
                     VLAYFPREAMEDPLLLLKFWEDISSFGGFAGGLLGLWLFFRFKARHVDAAGRLRYLDA
                     IAYVFPFAWAIGRVACTVAHDHPGTVTTFPLGISLKSPEAQAYVASFYREAGRLAELP
                     PPAALARMAFHDLGWYEFLYMSCLMVPAFLALGRKPRPPGFFLIAFLLLYVPARFSLD
                     FLRIGDARYLGLTPAQYAGIPVFLAALFFMVRIARSEEKE"
BASE COUNT          357 a          505 c          555 g          233 t
ORIGIN      
        1 cggatccgct tcacgttttt ctggacggac ccgggacgtt gggaagggag ggatttcgag
       61 gtcgccgtcc ttgggtcctg agctcataac ccagatacgc gacaatcgcc agattgaccg
      121 ccagcaccat cagcttgacc caggaaaagc cgcgggccag ctcgaagagc tccacaggga
      181 tgtagacgcc gccgctcagg gctccgaacc attccgccca acgtttccga tgccataagc
      241 cgaacgcttc gatgaaccgg acgacgacgt aaagaaaggc cgaaagggca aggagccaga
      301 gctgtgtgtc ggtgacgcgg gcgacggcgt cgaggaagat gcgggggtaa tgcctggcgg
      361 gattcaaatg gaggtgcctg acgagttctt ccaccgcatc gtgaaggcct tgatggatga
      421 aggccaggac cccgaatccc gttatgagga ccaaccctcc cttggccccc tcgaatacgg
      481 cgaccacccg aaggccgcgt tgccgggtct ctccagctag ccgatccatc gcgcgatgcc
      541 gaacgcgacc gccgcggcga accccccgat gcccacggtc tggagaccgc cggccagcgc
      601 gaacgggacg gtcagcccgt ccgccattcc gatcaccacg tcgcggacgg actcggacgc
      661 ggtgaagtgc ttctcggcat ggagcgttcc atacatggct actccttctc ttccgatcgg
      721 gcaatgcgaa ccatgaagaa gagcgcggcg aggaaaaccg ggatcccggc gtactgagcg
      781 ggggtcagcc cgaggtacct ggcgtcgccg atgcgcagga aatccaggga gaagcgggcc
      841 gggacgtaga ggagcaggaa ggcgatcagg aagaaccccg gcgggcgggg tttccggccc
      901 agcgcaagga aggcggggac catcaggcac gacatgtaga ggaattcgta ccatccgaga
      961 tcatggaacg ccatcctggc caaggccgcg ggcggaggca gttccgccag ccggccggcc
     1021 tcccggtaaa aggaggcgac gtaagcctgt gcctccgggg atttcaggct gatgcccagc
     1081 gggaacgtcg tgaccgtgcc ggggtggtcg tgggcgaccg tgcaggcaac gcggccgatc
     1141 gcccacgcga acgggaagac gtaagcgatg gcgtccaggt accgcaaccg gcccgccgca
     1201 tcgacatgcc gcgccttgaa acggaaaaag agccagagcc cgaggagtcc tccggcgaat
     1261 cccccgaagg agctgatgtc ctcccagaac ttcaggagaa gaagcgggtc ctccatcgcc
     1321 tcccgcggga aataggcgag gacggaatag aggtgggcga cgacgaagcc ggagaggagc
     1381 acgtacgaca ggaggtcctg gacgagctcg gggtcgaggc ccttcgcgcg ggtccgggca
     1441 acgaccatcc gccatcccac gatcacggcc acggcgacga tcgtcccgaa cgcgtggacg
     1501 gtgagcgggc cgaacaggtg gtacgagggt tgcgggaagt acgggatcat ggaacgtatt
     1561 atatgcggac tttccgtccg ctccctcggt gacgacggat ccctgcaatt tctccgcctg
     1621 acgaaacccg gaagcagcag gaaatcatct
//
LOCUS       DATGYW010000136         1865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_5585, whole genome shotgun sequence.
ACCESSION   DATGYW010000136 DATGYW010000000
VERSION     DATGYW010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1865
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5585"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..1815
                     /locus_tag="VK429_01860"
     CDS             133..1815
                     /locus_tag="VK429_01860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013822460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HLN90587.1"
                     /translation="MYDRKKLAGIATHRKKWHDEALAPSLGKSPPRLERFSTVSDEEI
                     DLLYTPDPLSNFDYEEDLGYPGQFPYTRGVQPTMYRGRLWTMRQFAGFGSAEDTNARF
                     KFLLSQGQTGLSTAFHFPTLMGYDSDSPRARGEVGMCGVAIDSLKDMEILFDGIPLDK
                     VTTSMTINGPAAMIFAMYLAVAEKQGVPFHKVGGTIQNDILKEYIAQHSWIFPPEPSM
                     RIITDILAYCADNVPRWNTISISGYHIREAGSTAVQELAFTIADGIAYVQAGVDAGIP
                     VDKFAPRLSYFFNAHMDFFEEIAKYRAARRMWARIMRERFHAKDENSWKLRFHTQTAG
                     CTLTAQQPMNNVVRVALQALSGVLGGTQSLHTNSMDETMALPTEQAVTVALRTQQIIA
                     EESGVANTIDPLGGSFFVEQLTNGMEEKAMEYIRKIDEMGGMVAAIKQGYPQREVADA
                     AFHFQRQVDAGKKRIVGLNAYRSEEGTPIPLLKIDDRVERQQVARTKEVRRRRDAKKA
                     RTCLSALKEGSLTPNVNLMPLLVDAAREYVTLGEMCDTLRETMGVYTDPAMF"
BASE COUNT          390 a          569 c          615 g          291 t
ORIGIN      
        1 gaggggggcg tagtgaggta aagcgcagcc gtgcaggttc atcgcacggc gagccacgaa
       61 cggagccccg ccctccgagg cgacgcagcc gagtcgaagt atttatgtaa tgcggcacta
      121 tttggaggcg ccatgtacga caggaaaaag ctcgcgggga tagcgaccca ccggaagaag
      181 tggcacgacg aggcgctggc gccgagcctt gggaaatcgc cgccgcgtct cgaacggttc
      241 tccaccgttt ccgacgagga gatcgacctc ctgtacactc ccgatcccct ttcgaacttc
      301 gattacgagg aggacctcgg gtaccccgga cagttccctt acacccgggg ggtgcaaccc
      361 acgatgtacc ggggccggtt gtggacgatg cgccagttcg caggatttgg gtcggcggag
      421 gatacgaacg cgcggttcaa gttcctcctc tcgcaaggcc agaccgggct ttccaccgcg
      481 ttccactttc cgacgctcat gggatacgac tccgactctc cccgggcgag gggggaggtc
      541 gggatgtgcg gcgtcgccat cgattcgctg aaggacatgg aaatcctttt cgacgggata
      601 ccgctggaca aggtcaccac ctcgatgacg atcaacggcc cggcggcgat gatcttcgcc
      661 atgtacctcg cggtcgcgga gaagcaggga gttcccttcc acaaggtcgg cggcacgatc
      721 cagaacgaca tcctcaagga gtacatcgcc cagcattcct ggatcttccc ccccgagccg
      781 tcgatgcgga tcatcaccga catcctcgcc tactgcgccg acaacgtccc gagatggaac
      841 acgatcagca tcagcgggta ccacatccgg gaagcgggat ccacggcggt acaggaactg
      901 gccttcacga tcgccgacgg gatcgcctat gtccaggcgg gggtcgacgc ggggatccct
      961 gtggacaaat tcgctccacg gctatcgtac ttcttcaacg cccacatgga cttcttcgag
     1021 gagatcgcga agtaccgggc ggcgcgcagg atgtgggcgc gcatcatgcg ggagcgtttc
     1081 cacgcgaagg acgagaattc atggaagctc cgttttcaca cccagacggc ggggtgcacg
     1141 ctcacggcgc agcagccgat gaacaacgtg gtccgtgtcg ccctccaggc gctatcgggg
     1201 gtcctcgggg ggacgcagtc cctccacacc aactcgatgg acgagacgat ggcgctcccc
     1261 accgagcagg ccgtgaccgt cgcgctgcgg acccagcaga tcatcgccga ggagtcgggc
     1321 gtcgcaaaca ccatcgaccc gctcggcggc tcgttcttcg tggaacagct gacgaacggg
     1381 atggaagaga aggcgatgga gtacatccgg aagatcgacg agatgggcgg gatggtagcc
     1441 gccatcaaac aggggtatcc tcagcgggag gtggcggacg cggccttcca tttccagcgg
     1501 caggtcgacg cggggaagaa gcggatcgtc ggcctcaatg cgtaccggtc ggaggagggg
     1561 accccgatcc cgctgctgaa gatcgacgat cgcgtggaga ggcagcaggt cgcgcggacg
     1621 aaggaagtcc ggcgcaggcg ggacgcgaaa aaagcgcgga cgtgcctgtc cgcgctgaag
     1681 gaagggtccc tcaccccgaa cgtgaacctg atgcccctcc tggtggacgc ggcgcgcgag
     1741 tatgtaaccc tcggcgagat gtgcgacacc cttcgggaga cgatgggcgt ctacaccgat
     1801 ccggccatgt tctgaaccaa cgcgaaccag gaggagaagc gatggcgacg gcaaagggaa
     1861 aaagc
//
LOCUS       DATGYW010000137         3236 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_119638, whole genome shotgun sequence.
ACCESSION   DATGYW010000137 DATGYW010000000
VERSION     DATGYW010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3236
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119638"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..901)
                     /locus_tag="VK429_01865"
     CDS             complement(<1..901)
                     /locus_tag="VK429_01865"
                     /inference="COORDINATES: protein motif:HMM:NF013727.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HLN90588.1"
                     /translation="MGGGASGAGGPGRSRPPPRVVARRPVPEEAAPPRAAGKAFVLPP
                     LDLLEPSRGVEEGIDEETLRENAQALLSKLAEHGIDGQITEIRSGPLVTMYEFRPAPG
                     IKANRVSAMADDLALAMRCESVRVVPNIPGKGVMGFEIPNGRRAPIVLRELLGCPAYA
                     SAVPVLSLAMGKDIFGDPVVRDLGKMPHLLIAGATGSGKSVALHTMILSILFRATPDE
                     VRLILVDPKMLELSLYDGIPHLYHPVVTQPRDAAQVLKWAVGEMRGRYQLMMENGVRH
                     IDAFNQFVEKRLRTGGRSKAEGEG"
     gene            complement(1497..3146)
                     /locus_tag="VK429_01870"
     CDS             complement(1497..3146)
                     /locus_tag="VK429_01870"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020677181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HLN90589.1"
                     /translation="MTLRVIPMGGVGEIGLNCMLFDDGGSALLIDAGLLFPDDTMLGV
                     DYVIPDFSVLRSTAPHLGALLLTHGHEDHIGAVPFLLREFDIPIYGTRLTLGLLRHRL
                     AEHGLEASARLFPIDRDARFRVGNFDVEAFPVCHSIPDAVGYVLRSPEGIFVHTGDFK
                     IDPYPLDGVPTGIERLREISAEGVTALFSDSTNVEREGVSPPEKFVGEALAEIFGQAP
                     GRVVVGMFSSNLHRIQEAIKAACACGRQVALCGRSMVRNVATAIDLGYLALPSPDILI
                     PVEDAASLPDRAVAVLTTGSQGEPRSALALMAHGEHKHLKVRPGDTIVLSSKFIPGNE
                     RAIAGLINRFFLAGADVLYEKISEIHVSGHASVEELRAMIAAVRPANFVPVHGEPRLL
                     VRHRNLAREAGVPRVAMLRNGDVLAFTGGEMSLAGRIEVGRRFVDGKGIGDVESLVLK
                     DRIHLSQVGLVMVVLAFSSTTGELLYGPDIVTRGVVTENGSEGLVEGARDEVLRAIEE
                     IGADARTDTAEMQTAIRRVVRRFFNKRIDRKPMIVPVLLEL"
BASE COUNT          545 a         1135 c         1073 g          483 t
ORIGIN      
        1 cgccctcccc ttccgccttc gatcggccgc ccgtgcggag ccgcttctct acgaactggt
       61 tgaacgcgtc gatgtgacgg acgccgtttt ccatcatcag ctggtaccgc ccgcgcatct
      121 cccccaccgc ccacttgagc acctgggccg cgtcgcgcgg ctgggtaacc accgggtggt
      181 acaggtgggg gatcccgtcg tagagcgaca gctcgagcat cttcgggtcg acgagaatga
      241 gccggacctc gtcgggcgtc gcgcggaaga ggatcgacag gatcatcgtg tggagcgcca
      301 cgctcttccc cgatccggtg gcgcctgcga tcaggaggtg gggcatcttc ccgaggtccc
      361 tgaccaccgg gtcgccgaag atgtccttcc ccatggccag cgacaacacg gggacggcgg
      421 aggcgtacgc ggggcacccg agcaactccc ggaggacgat cggagccctg cgcccgttgg
      481 ggatctcgaa ccccatgacg ccctttccgg ggatgttggg gaccacgcgc acggactcgc
      541 accgcatcgc aagcgccagg tcgtccgcca tcgccgagac ccggttcgcc ttgatccccg
      601 gcgcgggtcg gaactcgtac atggtgacca gggggccgga ccggatctcg gtgatctggc
      661 cgtcgatgcc gtgctccgcg agcttggaca gcaacgcctg tgcgttctcg cgcaacgtct
      721 cctcgtcgat cccctcctcg acgccccggg acggctcgag cagatcgagc ggcggcagga
      781 cgaacgcctt cccggcggcg cgggggggag cggcctcctc ggggacgggc ctccgcgcga
      841 cgactcgcgg gggggggcgg cttcttccag gccctccggc gccggacgcg cctcctccca
      901 cgtctcgcgc ggggccaact tctccttgat cctctcgcgg accttctccg gcgacgaatc
      961 cttgcggacc agcgccggca ggccgctcaa cgggagaccg gtgacgagca tcagggagaa
     1021 caggaggaga gcgaccagca ggacgagtcc gcccgcggta cccgctaccc tcccgaggaa
     1081 gtggaccccg agcaggtcgc cgacgacccc cggcaggaag acgtcctgcc ccatgacgga
     1141 gacatgtccc gtgaagaaac tgaggattcc gaggacggag cagactgcca ggagcccccc
     1201 cgcggcacgc ccccatttcc cgaggatctc ctcgccccgg tacgtccagt aggcgagaag
     1261 gatgcacagc agggggaatc cggcggcgcc tacgccgaac agttgaagga ggaggtccga
     1321 aaggatcgcc ccgccccagc cggcccagtt ccgaacctcg gcccccgggg ggcccgcggt
     1381 ggagagggag gggtccatct ggcgaaacga caccagcgcg acggagagga cgacccccgc
     1441 ggcgaggaaa aggaccgcca cggtttcccg gcggatcttt ccgatatctg ccaaggtcaa
     1501 agctccagca gcacggggac gatcatcggt ttccggtcga tgcgcttgtt gaagaagcgg
     1561 cgcaccaccc tccggatcgc ggtctgcatc tccgccgtgt cggtccgcgc gtcggccccg
     1621 atctcctcga tcgcgcggag aacctcgtcc cgcgccccct cgacgagccc ctcggagccg
     1681 ttttctgtaa ccacgccgcg ggtgacgata tcgggaccgt agaggagttc gcccgtggtc
     1741 gaggagaagg cgagaacgac catcaccagt cccacctggg agaggtggat ccgatccttg
     1801 agaacgaggc tctcgacgtc accgatcccc ttgccgtcga cgaagcggcg cccgacctcg
     1861 atccgcccgg ccagcgacat ctcccccccc gtgaaggcga gcacgtcgcc gttccgcagc
     1921 atcgcgacgc gcggcacccc cgcctcccgc gccaggttcc ggtgccggac gagcagccgc
     1981 ggctccccgt ggacggggac gaaatttgcc ggccggaccg cagcgatcat cgcccgcagc
     2041 tcctcgacgc tcgcgtgtcc ggacacatgg atctcggata ttttctcata gagaacatcc
     2101 gcccccgcga gaaaaaagcg gttgatgagg cccgcgatcg cccgctcgtt gccggggatg
     2161 aacttcgagg agaggacgat cgtgtcgccc ggccgcactt tcaggtgttt gtgctcaccg
     2221 tgggccatca gcgcaagcgc cgaccggggt tccccctggc ttccggtggt gagcaccgcc
     2281 acggcgcggt ccggcagcga agccgcatcc tcgacgggga tcaggatatc cggcgacgga
     2341 agcgcgagat atccgaggtc gatcgccgtc gccacgttcc gcaccatgct ccttccgcac
     2401 agggccacct gccggccgca agcgcaggcc gccttgatcg cctcctggat ccggtggagg
     2461 ttcgaggaga acatgcccac aacgaccctc cccggcgcct gtccgaagat ctccgcgagg
     2521 gcttccccga cgaacttttc cggcgggctc actccctccc gctccacgtt cgtggaatcg
     2581 gagaagagcg cggtgacccc ttccgcggag atctcccgga gccgttcgat cccggtcggc
     2641 acgccgtcga gcgggtacgg gtcgatcttg aaatcccccg tgtggacgaa gatcccctcg
     2701 ggggagcgca gaacgtatcc cacggcgtcg gggatgctgt ggcagacggg gaacgcctcc
     2761 acgtcgaagt ttccgacgcg gaaccgggcg tcccggtcga tcgggaaaag ccgcgcggac
     2821 gcctcgagcc cgtgctcggc gagacggtgg cgcagcagtc ccagcgtcag gcgggtgccg
     2881 tagatcggga tgtcgaattc gcggagaagg aacgggacgg ccccgatgtg gtcctcgtgc
     2941 ccgtgggtga gcaggagcgc gccgaggtgg ggcgcagtgg agcgcagaac ggaaaagtcc
     3001 gggatgacgt agtcgacccc cagcatcgtg tcgtcgggga acaggagtcc ggcgtcgatg
     3061 agcagcgcgg agccgccgtc gtcgaacagc atgcagttta ggccgatctc gccgaccccc
     3121 cccatcggga tcactcgcag cgtcatttct ctccttcccg tattaaccgc tcccgcacgg
     3181 cagcggcgat ccgctctttc gatcccccgg ccctttcatc cggtgaaagc ggggga
//
LOCUS       DATGYW010000138         1927 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_66940, whole genome shotgun sequence.
ACCESSION   DATGYW010000138 DATGYW010000000
VERSION     DATGYW010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66940"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..702)
                     /locus_tag="VK429_01875"
     CDS             complement(52..702)
                     /locus_tag="VK429_01875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90590.1"
                     /translation="MVRESALLEVIGFAASVVSDPSDGVFLWKTATGGKAVGCLPGTP
                     VPEILHAAGLLPIALESPEELSLVSGHIDAWLVGMDPSPFSIPSEGRPCFTFLCLPPG
                     SLEEALDRVEALAEWACAVSGSPASEGSLWRSIRGYATRRSLLDALDKRCTLETAFLT
                     PVERRDIVRAGSFLPPEAHSLLLSSILGTESAPAVLPAEGEKGDPLILLARRLNAG"
     gene            complement(707..1363)
                     /locus_tag="VK429_01880"
     CDS             complement(707..1363)
                     /locus_tag="VK429_01880"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HLN90591.1"
                     /translation="MPDFTRDETMDDVLSEVARESGEPETPAGDPEIPVGEHVRAFRE
                     AMGMTVQQFAERTGFSAALLTQIENRMVSPSLGTLVKIANTFGTTVSAFIGGKEEREF
                     SIVRKEDRTTVSRVGLKDGGKSTYTYESLGAGKAGRKMEPFLVRLQPLSESPSARSAH
                     DGEEFLYVLSGKVTVCLGNLSDVLEEGDSIYYNSTIPHHVHSADEREALILAVIHAGA
                     "
     gene            complement(1344..>1927)
                     /locus_tag="VK429_01885"
     CDS             complement(1344..>1927)
                     /locus_tag="VK429_01885"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HLN90592.1"
                     /translation="FKLPKAGGLRVTSDIIMAGFGGQGILMIGNLLSITAMEEGRHVT
                     YFPAYGVEMRGGTANCTVVVSDEEIGSPVVGRPRGLLIMNGPSMERFLPMLAPGGDLI
                     INSSLVEERQVTRNDVRLLQVPADDIARNKIGSRQMASMVALGAYVARSGIVNLSTVF
                     ECLPKVISKKYEKFIPLNVNALKEGAAIAGFHA"
BASE COUNT          338 a          621 c          633 g          335 t
ORIGIN      
        1 gtattggggc ggggggcatc cacaccgcta cgccctccgc gccgcggaag atcatccggc
       61 gttgagccgt ctggcaagca ggatcagagg atcgcccttc tccccttccg cggggaggac
      121 ggcgggggcg gattcggtgc cgaggatcga ggagaggagg agggagtgcg cctcgggtgg
      181 aaggaaactc ccggcgcgga cgatatcgcg gcgttctacc ggagtcagga acgcggtctc
      241 cagcgtacat cgcttgtcga gcgcgtccag gagagaccgg cgggtcgcat aaccccggat
      301 cgatctccag agggacccct cggatgccgg agagccggat acggcgcacg cccactccgc
      361 gagcgcctcg acccggtcca gcgcctcttc gaggctcccc ggcggcaagc acaggaatgt
      421 gaagcatggt ctcccctccg agggaatgga gaacggagag ggatccatcc cgaccagcca
      481 cgcgtcgata tgaccggata ccagggaaag ctcctccggg gattcgaggg cgatcggtaa
      541 caggccggcg gcgtgcagga tctcggggac gggagtcccc gggaggcagc cgacggcttt
      601 tccgccggtg gcggttttcc agaggaacac tccgtcggag gggtcggaaa cgacggacgc
      661 cgcgaacccg atcacctcca ggagggccga ttcgcgtacc accgtgttac gcccctgcgt
      721 ggatcaccgc gaggatgagc gcctcccgtt cgtccgccga atggacgtgg tgggggatcg
      781 tggaattgta gtagatgctg tccccttcct cgagcacgtc ggagaggttc ccgaggcaca
      841 ccgtcacctt cccggagagg acgtagagga actcctcccc gtcgtgcgcg ctccgcgccg
      901 agggagactc ggagagcggc tgaagccgga cgaggaacgg ctccatcttc cgccccgcct
      961 tcccggcgcc gagggattcg taggtgtagg tggacttccc cccgtccttg aggccgacgc
     1021 gggagacggt ggttcggtct tccttccgga cgatggagaa ctcccgctcc tcctttccgc
     1081 cgatgaacgc cgaaacggtg gtcccgaagg tgttggcgat cttcacgagc gtcccgaggg
     1141 acggcgagac catccggttc tcgatctgcg tcagaagcgc ggccgagaat ccggtccttt
     1201 cggcgaactg ctgcacggtc atgcccatcg cctcacggaa cgcccgcacg tgctccccca
     1261 ccgggatctc gggatctccc gccggcgttt ccggttcccc cgactccctg gccacttcgg
     1321 acaggacgtc gtccatcgtc tcgtcacgcg tgaaatccgg caatggcggc tccttccttc
     1381 aatgcgttga cgttcagggg gatgaacttt tcgtacttct tcgagatcac cttcgggagg
     1441 cattcgaaca ccgtcgagag attcacaatg ccggaccggg cgacatatgc cccgagggcg
     1501 accatcgatg ccatctgccg gctgccaatc ttgttgcggg cgatgtcgtc ggcggggacc
     1561 tggaggagcc ggacgtcgtt ccgggtcacc tgccgttcct cgaccaggga actgttgatg
     1621 atgagatccc cgccgggagc gagcatgggg agaaacctct ccatcgaggg accgttcatg
     1681 atgagaagtc ccctcgggcg tccgaccacg ggagagccga tctcctcgtc ggagacgacc
     1741 accgtgcagt tcgccgtccc gccgcgcatc tccaccccgt acgccgggaa gtaggtgacg
     1801 tgtctcccct cttccatcgc ggtgatggac agcaggttcc cgatcatcag gatcccttgt
     1861 ccgccgaacc cggccatgat gatatcggat gtcacgcgaa gtccgcctgc tttagggagt
     1921 ttgaaat
//
LOCUS       DATGYW010000139         1565 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_333046, whole genome shotgun sequence.
ACCESSION   DATGYW010000139 DATGYW010000000
VERSION     DATGYW010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333046"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VK429_01890"
     CDS             complement(<1..312)
                     /locus_tag="VK429_01890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase type 11"
                     /protein_id="HLN90593.1"
                     /translation="MAFEVMVDPETLRAQVKEKYREVALNPRGSFHFHTGRPLAVRLG
                     YDESVIASFPESAVEAFAGVANPFSLRSLSEGERVVDLGSGGGFDCFVASLQVGPQGH
                     VV"
     gene            805..>1565
                     /locus_tag="VK429_01895"
     CDS             805..>1565
                     /locus_tag="VK429_01895"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HLN90594.1"
                     /translation="MSDDLYKGILDNLYEGVYIVDPDRRITYWNSGAERITGYRPDEA
                     VGQRCQDNFLVHLDDRGNSLCLNGCQLFWTMANGQPLEAEVYLQHRDGYRVPISVRAA
                     PILDGTGRVVGAVEIFSDNSRVAALTELNKELRQLSLLDPLTEIGNRRFLEQQLMARL
                     NEQDRYGWRVGVLFVDVDHFKEINDRNDHIVGDRVIRMVARTLVNGIRSFDIVGRWGG
                     DEFVVLIVNVDEGQLHAIGEKLRRLIESSGFAEGGG"
BASE COUNT          345 a          478 c          443 g          299 t
ORIGIN      
        1 gacgacatgt ccttgggggc caacctgcag ggaagccacg aaacagtcga accctccccc
       61 cgatcccaga tcgaccaccc gttccccttc cgacagggag cgcagggaaa agggattcgc
      121 caccccggcg aacgcctcaa ccgccgactc cgggaacgat gcgatgacgc tctcgtcgta
      181 ccccaaccgg actgcgagcg gccgccccgt gtggaagtga aaactgccgc gaggattcaa
      241 agccacctcg cggtacttct ccttcacctg cgcgcgcaat gtctcggggt ctaccatcac
      301 ctcgaaagcc ataagtcctc cgaatcgccc aatccgaagt ttgctacccg acgccattcc
      361 gctgtgcaga tacaaaccat atttttgtaa taagattcga cggaaatcgg caaagattcc
      421 tatgtctcgg aaaaatcaat ccttccccgc ggccgggtgt cactggaatc tccacgggaa
      481 aaatgtgcga ccacgggagc ccccattcgt cccgcctctc catatactcc gacatagcaa
      541 gtgttaagtc cctcataatg aaccgggttc cccgatttga acccgcactg gtttcctcac
      601 tccccctcaa gataagggga gttggaccgc aaagtggtca actcaccgat aatcgaaacc
      661 gaatcaatga agaagttccg ctgcgcttct ccggaaattg tgggagattc tcgacgcgcc
      721 ccggggtcct ccccgttcga tggattgata taatggagat ctttccggtg agagggtcgc
      781 tgcgggaggt ctacgacacg agtcatgagt gatgatctgt ataaggggat cctcgacaac
      841 ctctacgaag gcgtctacat cgtcgacccc gaccgccgga tcacctactg gaactcggga
      901 gccgagcgga tcacgggcta ccggccggac gaagccgtgg ggcaacggtg tcaggacaac
      961 ttcctcgtcc acttggatga caggggaaac tctctgtgcc tcaacgggtg ccaactgttt
     1021 tggacgatgg ccaacggaca gcccctggag gccgaggtct atctccagca cagggacgga
     1081 tatcgggtgc ccatctccgt acgggccgcc cctatactcg acgggacggg acgtgttgta
     1141 ggtgcggtcg agatcttctc tgacaactcc cgggtagcag cattgaccga gcttaacaag
     1201 gaactccgac agctctccct tctcgaccct ctcacggaga tcgggaaccg gcgcttcctc
     1261 gagcagcaac tcatggcccg tctcaacgag caggaccgct acgggtggcg ggtcggtgtc
     1321 ctgttcgtgg acgttgacca cttcaaggag ataaacgacc gaaacgacca catcgtcggc
     1381 gatcgggtga tccggatggt cgcccggacc ttggtgaacg ggatccggtc cttcgacatc
     1441 gttgggcggt gggggggaga tgagttcgtt gtcctcatcg tgaacgtgga cgagggacag
     1501 ctccacgcca tcggagagaa gctccgtcgc ctcatcgaaa gttccggatt cgcggaaggg
     1561 ggagg
//
LOCUS       DATGYW010000140         1850 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_226704, whole genome shotgun sequence.
ACCESSION   DATGYW010000140 DATGYW010000000
VERSION     DATGYW010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1850
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226704"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..1439
                     /locus_tag="VK429_01900"
     CDS             51..1439
                     /locus_tag="VK429_01900"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HLN90595.1"
                     /translation="MTAQRVLILASDARRMEEMVQVPSMKGVHFSILSDWKSGEDALR
                     KENFSVIVARKFSKAQGTDAFVADLLALAPKTSMIHILGEKEGPSVLEALKGGVSEIL
                     FEESLAQTLVPCVEKYLFSGYGLLRRMSLDELFDFCIPVITSTDMGLLATTILEKFRE
                     ALGASFGILFRGGEKGGGPNAMLASLGFPDDIIPAGFLRRFGEALATPGPGPTVTHAD
                     TLNAYALGGSDFLSGNRVLLSVPFDLAVGSRVYAVLGLRGTPDAEVLNSPLLNFFQRQ
                     ARLALINAERSAQAQSLIYIDDLTKLYNGRYLNVVLDREMKRSERYRNFFCVLFMDID
                     FFKRVNDAHGHLIGSRVLVEVGTVLRACVRDSDTVVRYGGDEFVVLLVETNADEAMIV
                     AERMRKMIEAEPFAKETGIAIRLTISIGIAAFPQHATTKQNLLNLADQAMYRGKESTR
                     NVVYLAHAQNVP"
     gene            1436..>1850
                     /locus_tag="VK429_01905"
     CDS             1436..>1850
                     /locus_tag="VK429_01905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005582968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HLN90596.1"
                     /translation="MTLATVRGMKDILPPESERWAALEASFRAHAGRFGFREIRTPLL
                     ERTELFARAVGETTDIVEKEMYTFTDRSGESLTVRPEGTASVVRAFLDHRPGAGEGPV
                     RLFYIGPMFRHERPQKGRMRQFHQLGAELFGTDAPY"
BASE COUNT          307 a          612 c          602 g          329 t
ORIGIN      
        1 gtgacggttt tcctgcccgg gttcgtcctg agcggtttcg gagcgggccg atgaccgccc
       61 aacgcgtcct gatcctcgcc tccgacgcga ggcgcatgga ggagatggtt caggttccgt
      121 ccatgaaggg cgtgcatttc tcgatcctct ccgactggaa gagcggcgag gacgctctcc
      181 gcaaggagaa tttctccgtc atcgtcgccc ggaaattctc caaggcgcag gggacggatg
      241 cgttcgttgc ggacctcctc gcgctcgccc ccaagacctc gatgatccac atcctagggg
      301 agaaggaagg cccgtcggtc ctcgaagccc tgaaaggcgg agtatccgag atcctcttcg
      361 aggaatccct ggcacaaacc ctcgtcccgt gcgtcgagaa gtacctcttc tcgggctacg
      421 gcctgctccg gaggatgtcg ctcgacgaac tgttcgactt ctgcatcccg gtgatcactt
      481 cgacggacat ggggctgctg gccaccacga tcctcgaaaa gttccgcgag gcgctgggtg
      541 cttccttcgg gattcttttc cggggcgggg agaagggcgg tgggccgaac gcgatgctcg
      601 cgtccctcgg gttcccagat gatatcatcc ccgccggttt cctccggcgc ttcggggagg
      661 cgctggcgac gccgggtccc ggcccgaccg tgacccacgc cgacacgctg aacgcgtacg
      721 cgttgggcgg ctcggacttc ctctcgggga accgcgtcct tctctccgtg cccttcgacc
      781 tcgccgtggg ttccagggta tacgccgtgc tggggctgcg gggcactccg gacgcggagg
      841 tcctcaactc gccgctcctc aacttcttcc agcgccaggc gcgcctcgcc ctcatcaacg
      901 cggagcgcag cgcgcaggcg cagagcctga tctacattga cgacctcacg aagctctaca
      961 acggccgcta cctgaacgtg gtcctggacc gggagatgaa gcggtccgaa cggtaccgga
     1021 acttcttctg cgtcctcttc atggatatcg atttcttcaa gcgggtcaac gacgcgcacg
     1081 gacatcttat cggcagccgc gtcctggtgg aggtggggac ggtcctgcgc gcctgcgtcc
     1141 gggattccga cacggtggtc cggtacggcg gggacgagtt cgtcgtcctc ctcgtcgaga
     1201 ccaacgcgga cgaggcgatg atcgtcgcgg agcggatgcg gaagatgatc gaggcggagc
     1261 cgttcgccaa ggagacgggg atcgcgatcc ggttgacgat ctccatcggg atcgcagcct
     1321 tcccccagca cgcgaccacg aagcagaacc tgctcaacct cgcggaccag gcgatgtacc
     1381 gcgggaagga atccacaagg aacgtcgtct acctggccca cgcccagaac gtcccatgac
     1441 attggcgacc gtccggggga tgaaggacat ccttcccccc gagtccgaac gttgggcggc
     1501 actcgaagca tcgttccgcg cccacgccgg gcggttcggc ttccgggaga tccggacccc
     1561 cctgctcgaa cggaccgaac ttttcgcgcg ggccgtgggg gagaccaccg acatcgtcga
     1621 gaaggagatg tacaccttca ccgaccggtc cggtgagagt ctgacggtgc gtcccgaggg
     1681 gaccgcgtcg gtggtccgcg cgttcctcga ccaccggccc ggtgcgggcg aggggccggt
     1741 ccgcctcttc tacatcggcc cgatgttccg gcatgagcgc ccgcagaagg ggcggatgcg
     1801 gcagttccac cagctgggcg cggaactgtt cggcaccgat gcgccgtacg
//
LOCUS       DATGYW010000141         3557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_387555, whole genome shotgun sequence.
ACCESSION   DATGYW010000141 DATGYW010000000
VERSION     DATGYW010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3557
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387555"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..383
                     /locus_tag="VK429_01910"
     CDS             <1..383
                     /locus_tag="VK429_01910"
                     /inference="COORDINATES: protein motif:HMM:NF037628.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90597.1"
                     /translation="VRRRTIDAQLRIAEITPGLLSDLDRLRPFGAGNEEPLFLLPNVR
                     VAAISRIGARGRHLRFAVEEDGRRLSGVAFRREEIPVSASGRSDLLIAIHENVYRGAR
                     SIQLLLKDARPAGESVLCGGMPPG"
     gene            436..1326
                     /gene="speB"
                     /locus_tag="VK429_01915"
     CDS             436..1326
                     /gene="speB"
                     /locus_tag="VK429_01915"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR01230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HLN90598.1"
                     /translation="MIPYSVTFGGISGRYASWKDATFVVIPFPVDMTTTYMTGTRNGP
                     RAILDASSHMELFDEENKIEPYRAGIFVSTEVPVSLAGPVPAMKEVERRVKATVRAGK
                     VPVLLGGEHSGTVGAVAALRKRYGDLTVLQFDAHTDLRDTYLGTPHNHACVGRRIVDA
                     GARLVQVGIRSMSEEEDRFLKKSEEVKTFYASEVRDNVADVTKGIVSSLSENVYISID
                     LDVFDPGIMPAVVTPEPGGLSWFEGIDILRDVMRSNRNIVGFDVMELAPIAGMAAPDY
                     LAARLCYRLMGWLVARQSEK"
     gene            1352..1891
                     /locus_tag="VK429_01920"
     CDS             1352..1891
                     /locus_tag="VK429_01920"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006929252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006596 - polyamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine decarboxylase, pyruvoyl-dependent"
                     /protein_id="HLN90599.1"
                     /translation="MSVPTKIFFTKGVGRHREQLTSFELALRDAGIQKYNLVQVSSIF
                     PPKCRIVKKEEGLKLLAPGEIVFVVMSRCCSDEPRRLVAASVGCALPSDRSVYGYLSE
                     HHAFGQTEKVAGDYAEDLAAAMLASTLGVEFDEDKSWDEKREVWKISGKIYRSFNITQ
                     SAIVKDEYTTVLAAAVLVL"
     gene            1903..2895
                     /locus_tag="VK429_01925"
     CDS             1903..2895
                     /locus_tag="VK429_01925"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011419066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HLN90600.1"
                     /translation="MRGARIIGTGRALPKRVVKNEELTRRMDTSDEWIVQRTGVRERR
                     YAEPGTGSSHLGVEASRKAIADAGITVNDIDLIVFATLSPDHVFPGNGVLVQEQLGMR
                     TVGALDVRDQCTGFVYGLSVAEAYVKGGFHDRVLVIGAEVQSTGLDFSTKGRDVAVIF
                     GDGAGAVVVGPAEPGRGILSSHLHSEGKYAKELWVEAPSFLDNPWITHEMIDAGRHFP
                     KMNGRYVFTHAVRRFPEVTREALEKNGLTIADLSLLIPHQANLRITQAVGSALQLPEG
                     KVFSNVERYGNTTAASIPIALDECIEQGRIREGDIVCLASFGSGFTWASALLRW"
     gene            2920..3363
                     /gene="rimI"
                     /locus_tag="VK429_01930"
     CDS             2920..3363
                     /gene="rimI"
                     /locus_tag="VK429_01930"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: protein motif:HMM:TIGR01575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HLN90601.1"
                     /translation="MGPSDLDGVMAIEEVSFPTPWSRGMFIEDFPRDFSDTLVAAGTD
                     DEVLGYAVCWTIAGESHLLNIAVHPARRGEGIGRALLSECIRRAARAGASLIYLEVRA
                     GNDAAQRLYRSMGFEFRGIRKGYYTDTAEDAVIFDREVRKSDAAG"
     gene            3350..>3557
                     /locus_tag="VK429_01935"
     CDS             3350..>3557
                     /locus_tag="VK429_01935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90602.1"
                     /translation="MPQGNARFVHGKILHNTGSGIFYRMEVAIPERIDFVPGQFAMVS
                     GWPGNDPLLPRPLAIFRSGGVRGRG"
BASE COUNT          595 a         1120 c         1250 g          592 t
ORIGIN      
        1 tcgtccggcg ccggacgatc gatgcgcagc tgcgcatagc cgagatcacc ccgggccttc
       61 tgtccgatct cgaccgcctg cggcccttcg gcgccgggaa cgaagaaccg ctgttcctcc
      121 ttccgaacgt ccgcgtcgcg gcgatctcgc ggatcggtgc gagaggtcga cacctccggt
      181 tcgcggtaga ggaggacggg cggcgtcttt ccggcgtggc gttccgtcgg gaggagatcc
      241 cggtctccgc ctcgggccgt tcggacctcc tcatcgccat ccatgaaaat gtctaccgcg
      301 gcgcgcgttc aatccagctt ctgctgaagg acgcgaggcc ggcgggggag tcggtattgt
      361 gcgggggaat gccgccgggg tagaatctgc cggacagctc gcctcacccc aaccgtttca
      421 caggaggtcc tcaccgtgat tccatactcc gtcacgttcg gagggatatc cggcagatac
      481 gcgtcgtgga aggacgcgac cttcgtcgtg atcccgtttc cggtcgacat gacgacgacg
      541 tacatgacgg gaacccgcaa cggtccgcgc gccatcctcg acgcctcctc ccatatggaa
      601 ctgttcgacg aggagaacaa aatcgagccg taccgggccg ggatcttcgt ctccacggag
      661 gtgccggtct ccctggcggg gccggttccg gccatgaagg aagtcgagcg gcgggtgaag
      721 gccacggtgc gggccggcaa ggtccccgtg ctgctcggcg gggaacattc cggaacggtg
      781 ggggcggtgg ccgcgctgcg caagcggtac ggagatttga ccgtgctgca attcgacgcc
      841 cacacggacc ttcgggacac gtatctcggg acgccgcaca accatgcgtg cgtcggccgg
      901 cggatcgtcg acgcgggggc ccgtctcgtc caggtcggca tccggagcat gtccgaggag
      961 gaggaccgct tcctgaagaa gtcggaggag gtgaagacgt tctacgcctc cgaggtccgg
     1021 gacaacgtgg ccgacgtcac gaaggggatc gtcagctccc tctcggagaa cgtctacatc
     1081 tcgatcgacc tcgacgtgtt cgacccgggg atcatgcccg ccgtcgtcac gcccgagccc
     1141 ggggggctct cctggttcga ggggatcgac atcctgcggg acgtgatgcg ttcgaaccgg
     1201 aacatcgtcg ggttcgacgt gatggagctc gccccgatcg ccgggatggc tgccccggac
     1261 tacctggccg cccgcctttg ctaccgtttg atgggctggc tcgtggcgcg ccagtccgag
     1321 aagtaagatt ccggcgaagg agaacccgcg catgtccgtt cccacgaaga tcttcttcac
     1381 caagggggtc ggccgccacc gcgagcagct tacctcgttc gagcttgcgc tgcgggacgc
     1441 cgggatccag aagtacaacc tcgtccaggt gtcgagcatc tttccgccga agtgcaggat
     1501 cgtgaagaag gaggagggct tgaagcttct cgcccccggc gagatcgtat tcgtggtcat
     1561 gagccggtgc tgcagcgacg aaccgcggcg gctggtcgcc gcctccgtcg ggtgcgcgct
     1621 cccctcggac cggtcggtgt acggatacct gagcgagcac catgccttcg gacagaccga
     1681 gaaagtggcg ggggattacg cggaggacct ggcggcggcg atgctggcgt cgacgctcgg
     1741 cgtggaattc gacgaggaca agagctggga cgagaagcgg gaggtgtgga agatcagcgg
     1801 gaagatctac cgctccttca acatcacgca gtcggccatc gtcaaggacg agtacaccac
     1861 ggtcttggcc gcggctgtgc tggtcttgtg aagggggcgg gaatgcgcgg agcgcggatc
     1921 atcggcacgg ggcgggccct accaaagcgc gtggtgaaga acgaggagct gacgcgccgg
     1981 atggacacgt cggacgagtg gatcgtccag cgcaccgggg tccgggagcg ccggtacgcc
     2041 gagccgggga cgggctcgtc ccacctcggc gtcgaagcct cgcgcaaggc gatcgcggac
     2101 gccgggatta cggtgaacga catcgacctg atcgtctttg ccaccctctc gccggatcac
     2161 gtcttccccg ggaacggcgt cctggtccag gagcagctcg ggatgcggac cgtgggcgcc
     2221 ctcgacgtgc gcgaccagtg caccggtttt gtgtacggcc tctccgtggc ggaggcgtac
     2281 gtcaagggcg ggttccacga ccgcgtcctt gtgatcggcg ccgaagtgca gagcaccggg
     2341 ctcgatttca gcacgaaggg gcgcgacgtg gcggtgatct tcggggacgg cgcgggggcg
     2401 gtcgtcgtcg gccccgcgga accggggagg gggatcctct cttcccacct tcactccgaa
     2461 gggaaatacg ccaaggagct gtgggtcgaa gcgcccagtt ttctcgataa cccatggata
     2521 acccacgaga tgatcgacgc cgggagacat ttcccgaaga tgaacggccg gtacgtcttc
     2581 acccacgccg tccggcgctt ccccgaggtg acccgggagg ccctcgaaaa gaacggcctc
     2641 accatcgcgg acctctccct gctgataccc caccaggcga acctgcgcat cacccaggcg
     2701 gtcggatccg ccctccagct gcccgagggg aaggtgttct ccaacgtcga gcggtacggg
     2761 aacacgacgg cggcgtcgat cccgatcgcg ctcgacgagt gcatcgagca gggccggatc
     2821 cgggagggag acatcgtctg tctcgcatcg ttcggttccg gattcacctg ggcctcggcg
     2881 ctcctccgct ggtagcgcgg ggaggtgcgg atccgggaga tgggcccgtc ggacctggac
     2941 ggcgtgatgg cgatcgagga ggtctccttc ccgacgccct ggtccagggg gatgttcatc
     3001 gaagatttcc cgcgcgactt ctccgatacc ctggtcgcgg cggggacgga tgacgaggtc
     3061 ctcgggtacg ccgtctgctg gaccatcgcg ggggagtccc acctgttgaa catcgccgtg
     3121 caccccgccc ggcggggaga ggggatcggc cgggccctcc tgtccgaatg catccgccgc
     3181 gcggcgcggg cgggggcctc gctgatctac ctggaggtgc gcgccgggaa cgacgccgca
     3241 caacggctct accgttcgat ggggttcgag ttccggggga tccggaaagg gtattacacc
     3301 gacacggcgg aggatgccgt catcttcgac cgggaggtac ggaaaagcga tgccgcaggg
     3361 taacgcccgg ttcgtccacg ggaagatcct tcacaacacg gggagcggca tcttctacag
     3421 gatggaggtg gcgatcccgg agcggatcga cttcgtcccc ggtcagttcg cgatggtctc
     3481 ggggtggccg gggaacgatc cgctgctgcc gcggcctctt gcgatcttcc gctccggcgg
     3541 cgtccggggg agaggga
//
LOCUS       DATGYW010000142         1921 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_387587, whole genome shotgun sequence.
ACCESSION   DATGYW010000142 DATGYW010000000
VERSION     DATGYW010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1921
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387587"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(38..475)
                     /locus_tag="VK429_01940"
     CDS             complement(38..475)
                     /locus_tag="VK429_01940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90603.1"
                     /translation="MNRFGKWVALCVAIGALAFGTSASGGSEGAKAPDASEPIKVEKA
                     KGADACTVSEAYENAGKLDKKTVVVRGKVVKVSNGIMGKNWVHLRDGSGDAGKGTNNL
                     VVTTQDVPNVGAVVTAKGTLHKDKDFGAGYKYRVIVEEATVKP"
     gene            595..1179
                     /locus_tag="VK429_01945"
     CDS             595..1179
                     /locus_tag="VK429_01945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012470957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HLN90604.1"
                     /translation="MRVVGINGSARKGGNTTLLLRHVFAELQNEGIETELVELAGKRI
                     HGCTACYKCFANKDRRCAVKGDVANDCIAKIDGADGILLGSPTYFTDVTAEMKALIDR
                     AGMVGRANETMYRRKVGAAVVAVRRAGAIHAFDTMNHFFLIAQMIVPGSSYWNIGVGR
                     EIGDVEKDEEGVATMRTLGRNMAWLLKRLNGREG"
     gene            complement(1183..1488)
                     /locus_tag="VK429_01950"
     CDS             complement(1183..1488)
                     /locus_tag="VK429_01950"
                     /inference="COORDINATES: protein motif:HMM:NF013844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HLN90605.1"
                     /translation="MAGGEIDLHGLTVADALARFTAHYNARLRSGDAGPIRVIHGYGS
                     SGRGGDLRTALRELLSRHAGRLEFVPGETYFNNPGVTVVYPKNPLPASSPNVRTGRR"
     gene            complement(1505..>1921)
                     /locus_tag="VK429_01955"
     CDS             complement(1505..>1921)
                     /locus_tag="VK429_01955"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HLN90606.1"
                     /translation="NLWSIEPYYAFTWFLTPEFSTSWRIHYTYNSKNEDPFVALGAND
                     LQPGQAFHFNYSFEYEFYKNFRGAVAGYYLKQLTDDEVNGNSVPGSKEQVFAIGPAVS
                     WSASQNFFLGLKTAWETSTENRPEGNRTTFRMTYKF"
BASE COUNT          346 a          599 c          630 g          346 t
ORIGIN      
        1 tcccccgatc cggagccgac ggatccagcg ggcggcacta aggtttgacg gtcgcctcct
       61 cgacgatcac ccggtacttg taccccgcac cgaaatcttt gtccttgtgg agggtaccct
      121 tcgccgtcac cacggccccg acgttcggga cgtcctgcgt ggtgaccacc aggttgttcg
      181 ttccctttcc cgcatctccg ctgccgtcgc gcaggtggac ccagttcttt cccatgatcc
      241 cattggacac tttgacgacc ttcccccgga cgacgacggt cttcttgtcc agcttcccgg
      301 cgttctcgta ggcttcggac acggtacagg cgtccgctcc cttcgccttt tccaccttga
      361 tcggttcgga ggcatccggc gccttcgcgc cttcgctccc gccgctcgcc gaagtcccga
      421 acgccaacgc tccgatggca acgcacagag cgacccattt gccgaaacga ttcatccgta
      481 tcccctttcc gggtaatgtt cggacagttt accatcctcg tccccttgtc ggctaaacta
      541 cgcacgggag gcctgtcgcg agggccgatg aagatccgga agaagggaga cccgatgcgg
      601 gtggtgggga tcaacgggag cgcccggaag ggcgggaaca cgaccttgct ccttcggcac
      661 gtgttcgcgg agttgcagaa cgaggggatc gaaacggagc tcgtggaact ggccgggaag
      721 aggatccacg ggtgcaccgc ctgctacaaa tgcttcgcga acaaggaccg ccggtgcgcg
      781 gtgaaggggg acgtggcgaa cgactgcatc gcgaagatcg acggcgccga cggcatcctg
      841 ctgggatctc ccacctactt caccgacgtc accgcggaga tgaaggcgct gatcgaccgg
      901 gcggggatgg tcgggcgggc caacgaaacc atgtaccgga ggaaggtcgg ggcggccgtg
      961 gtggcggtgc gccgtgccgg cgcgatccac gccttcgaca cgatgaacca cttcttcctc
     1021 atcgcgcaga tgatcgttcc cggatcgagc tactggaaca tcggggtcgg ccgggagatc
     1081 ggcgacgtgg agaaggacga ggagggggtg gcgacgatgc gcaccctcgg acggaacatg
     1141 gcgtggctgc tgaaacgcct gaacgggagg gaggggtgac cgctaccggc gtcccgtccg
     1201 gacgttgggg gaggacgccg gtagcggatt cttcgggtag acgaccgtca cgccggggtt
     1261 gttgaagtac gtctccccgg ggacgaattc gaggcggcct gcatggcggg agagcagttc
     1321 acggagcgcg gtccgcaggt cgccgccgcg gcccgaggag ccgtagccgt ggatcacgcg
     1381 gatcggtccg gcgtcccccg accgcagccg cgcgttgtaa tgggccgtga aacgggcaag
     1441 ggcatccgcc acggtcagcc cgtgaaggtc gatctccccg cccgccatct agtgcagaac
     1501 tcgattagaa cttgtacgtc atccggaagg tggtccggtt cccctccggg cggttctccg
     1561 tcgaggtctc ccacgccgtc ttcaacccga ggaagaagtt ctgggaggcg gaccaggaga
     1621 ccgccgggcc gatggcgaag acctgctcct tcgagcccgg aaccgagttc ccgttcacct
     1681 cgtcgtccgt gagctgcttc aggtaatacc ccgccaccgc tccccggaaa ttcttgtaaa
     1741 actcgtattc gaacgagtag ttgaaatgga acgcctgccc cggctgcagg tcgttcgccc
     1801 ccagagcgac gaacggatct tcgttctttg agttgtaggt gtaatggatc cgccaggagg
     1861 tggagaactc cggagtgagg aaccaggtga aggcgtaata cggttcgatg gaccagaggt
     1921 t
//
LOCUS       DATGYW010000143         3067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_226921, whole genome shotgun sequence.
ACCESSION   DATGYW010000143 DATGYW010000000
VERSION     DATGYW010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_226921"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..>3067)
                     /locus_tag="VK429_01960"
     CDS             complement(24..>3067)
                     /locus_tag="VK429_01960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012096566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLN90607.1"
                     /translation="LPVSDLPNVDFPTILVTANLPGASPETMASSVATPLERQFTTIA
                     GLDSMVSSSGLGLTQITLTFTLNRNIDAAAQDVQASITKAASLLPKDMPTPPSYQKVN
                     PADQPVLYLSLSSPTLPLSTVDEYAETFIAQRVSTVSGVAQVQVFGSQKAAVRIQLDP
                     DALASRGIGIDEVAQAVGQGNVNLPTGTLYGPFQAFTLETSGQLKDAEAYRPLVVAYR
                     NGAPVRLRDIGSVIDGVENDKVASWYNKTRAIVLAIQKQPGTNTVEVVDAIRLLLPTF
                     RTQMPASVDLAILYDRSVSIRDSVHDVKFTLFLAICLVVLVIFLFLRNVSATVIPSLA
                     LPMAIVGTFAVMYLLGYSLDNLSLMALTLSVGFVVDDAIVMLENIVRHMEKGKNARQA
                     AFDGSREIGFTILSMTLSLAAVFIPVFFMGGVVGRLLHEFAATIIAAILISGVVSLTL
                     TPMLCSRFLRPPAAERHGRLYAASERVFNTMLAGYDWSLTRVLRRPRTTILVSIVLFV
                     ATAYLFVSIPKGFLPNEDTGLIFTFTEAAQGISFDAMKEHQIAVADIIGKDPNVESLM
                     SSVGPSGPNVSGNSGRIFIRLKPRADRALSVDGVIEEMRPKLAGIPGIRAFMQNLPPI
                     RIGGQLTKSQYQLTLQSPDTGELYRLAPLLEEKLRGLPGLQDVTSDLQIANPQVNVEI
                     DRDKARSMGVSAEQIESALFSAYGARQVSTIFAPNNTYKVILELEPQFQRDPTALSRL
                     YVRSTSGMLVPLYAVARLTPGVGPLLVNHLGQLPSVTLSFNLRPGVALGDAVSAVDKV
                     ARATLPASITTSFQGTAQAFQDSLKGLGILLLMAILVIYIVLGVLYESFIHPLTILSG
                     LPSAGLGALLALLLYRMDLNLYAFVGVIMLIGIVKKNAIMMIDFALEAERKEGKGPTE
                     AILEGCLVRFRPIMMTTMSALMATLPIAIGYGAGGESRRAMGIAVVGGLLFSQLITLY
                     LTPVVYVTLDRLQASFRKVTRGGRPSVTSGPTPPERNPEQP"
BASE COUNT          549 a          940 c         1077 g          501 t
ORIGIN      
        1 ggagagcctc catcggtctc ccttcacggt tgttctggat tcctctccgg tggagtcggc
       61 ccgctggtta cagatgggcg ccccccgcgg gtcaccttgc ggaaggacgc ctgtaaccgg
      121 tccagggtca cgtagacgac cggggtgagg taaagggtga tcaactggga aaagaggagg
      181 ccgcccacga cggcgatccc catcgccctc cgcgattccc cccccgcccc gtagccgatc
      241 gcgatcggaa gggtggccat gagggcggac atcgtggtca tcatgatcgg ccggaaccgg
      301 acgaggcacc cttccaggat cgcctcggtg ggtccctttc cttccttgcg ctcggcttcc
      361 agcgcgaagt cgatcatcat gatggcgttc ttcttcacga taccgatgag catgatgacg
      421 cctacgaagg cgtagaggtt caggtccatc cggtagagaa gcagcgccag cagcgcgccg
      481 agccccgcgg aagggaggcc ggacaggatc gtgagagggt ggatgaaact ttcgtacagc
      541 actccgagga cgatgtagat gaccaggatc gccatcagca ggaggatccc gagacccttc
      601 agggaatcct gaaacgcctg ggcggtcccc tggaaactcg ttgtgatgga cgcggggagg
      661 gtggcgcggg caaccttgtc caccgcggac accgcgtcgc ccagggccac gccgggccgg
      721 aggttgaacg agagggtgac cgaggggagc tggccgaggt ggttcacgag gagcgggccc
      781 acgccggggg tgaggcgggc cacggcgtac agcggcacca gcatcccgga ggtggagcgg
      841 acgtacagcc gggagagcgc cgtcggatct ctctggaatt ggggctcgag ctccaggatc
      901 accttgtatg tgttgttggg cgcaaagatg gtggatacct gccgagcccc gtaggcgctg
      961 aagagcgcgc tctcgatctg ctccgccgag acgcccatcg accgcgcttt gtcgcggtcg
     1021 atctccacgt tgacctgcgg gttcgcgatc tgcaggtcgc tcgtcacgtc ctgcagcccc
     1081 ggcaaaccgc gcagcttttc ctccagaagg ggggccagcc tgtacagctc gccggtgtcc
     1141 gggctctgca gcgtgagctg gtactggctc ttcgtgagct gtcctccgat ccggatcggt
     1201 ggaaggttct gcatgaacgc gcggattccg gggatcccgg ccagtttcgg acgcatctcc
     1261 tcgatcaccc cgtccacgct caaagcgcga tccgcccggg gtttgaggcg gatgaagatc
     1321 cgccccgagt tccccgacac gttcgggccg ctggggccca cgctggacat cagggactcc
     1381 acgttcgggt ccttgccgat gatgtccgcc acggcgatct ggtgctcctt catcgcgtcg
     1441 aaggagatcc cctgcgccgc ctcggtgaac gtgaagatca gcccggtgtc ctcgttcggc
     1501 aggaacccct tggggatgga gacgaacagg tacgccgtcg cgacgaaaag gacaatggaa
     1561 acgaggatcg tggtccgcgg gcgccgcagg accctcgtga ggctccagtc gtatcccgcg
     1621 agcatggtgt tgaagacccg ctccgaggcg gcgtagaggc gcccgtgccg ctccgccgcc
     1681 ggcggccgga gaaaccggct gcacagcatg ggcgtaaggg taagggagac gacccccgag
     1741 atgaggatcg cggcgatgat cgtcgccgcg aactcgtgga ggagacggcc gacgaccccc
     1801 cccatgaaaa agaccgggat gaagaccgcg gcgagcgaca aggtcatcga caggatggtg
     1861 aagccgatct cgcgcgatcc gtcgaacgcg gcctggcggg catttttccc tttttccatg
     1921 tgccggacga tgttctcgag catgacgatg gcgtcgtcga ccacgaaccc gaccgagagc
     1981 gtcagggcca tcagcgagag gttgtccagg ctgtagccca gcagatacat cacggcgaag
     2041 gtccccacga tcgccatcgg aagggccagg ctggggatca cggtcgccga gacgttccgc
     2101 aggaacagga agatcaccag gacgaccagg cagatggcca ggaacagcgt gaacttgacg
     2161 tcgtgcaccg aatcgcggat cgacacggag cggtcgtaga ggatcgccag gtcgacggag
     2221 gcgggcatct gggtccgaaa cgtcggaagg agcaggcgga tggcgtccac cacctcgacg
     2281 gtgttggtgc ccggctgctt ctggatggcc aatacgatcg cgcgggtctt gttgtaccag
     2341 ctcgccacct tgtcgttctc gacgccgtcg atgacggacc cgatgtcccg gagccgcacc
     2401 ggggccccgt tccggtaggc gacgacgagg ggacgatacg cctcggcatc cttgagctgg
     2461 ccgctcgtct cgagcgtgaa cgcctggaac gggccgtaca aggttccggt gggcaggttc
     2521 acgttcccct gcccgaccgc ctgcgccacc tcgtcgatcc cgatcccccg cgaggccagg
     2581 gcgtcggggt cgagctggat acggacggcg gccttctgcg acccgaagac ctggacctgg
     2641 gcgaccccgc tcacggtgga gacgcgctgg gcgatgaacg tctccgcgta ctcgtccacc
     2701 gtggaaagcg gaagggtggg ggaagacagg gagaggtaca ggaccggctg gtccgccggg
     2761 ttgaccttct ggtaggacgg cggggtcggc atgtctttcg gcagcaggga cgccgccttg
     2821 gtgatggacg cctggacgtc ctgggcggcc gcgtcgatgt tccggttcag ggtgaacgtg
     2881 agcgtgatct gcgtcaaccc gaggccgctg ctggacacca tggagtcgag ccccgcgatc
     2941 gtggtgaact ggcgctcgag aggggtggcc acggaggagg ccatcgtctc ggggctggcg
     3001 ccgggaaggt tcgccgtgac gaggatcgtc ggaaaatcga cattggggag gtcgctcacc
     3061 ggcaggc
//
LOCUS       DATGYW010000144         1596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_279965, whole genome shotgun sequence.
ACCESSION   DATGYW010000144 DATGYW010000000
VERSION     DATGYW010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279965"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1596
                     /gene="uvrB"
                     /locus_tag="VK429_01965"
     CDS             <1..>1596
                     /gene="uvrB"
                     /locus_tag="VK429_01965"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HLN90608.1"
                     /translation="VIAAVDRPALVIAPNKTLAAQLYSEFKSLFPENAVEYFVSYYDY
                     YQPEAYVPHTDTYIEKDSAINEQIDKMRHSATRSVMTRGDVIVIASVSCIYGLGSPEY
                     YARMTVRVEEGEEFPRNTLLRRLIDLQYERNDVDFHRGTLRVRGDAVELFPAYEEEKV
                     LRIEYDEDRIARILHVDPLRGTRIRELRETVIFPASHYVTPEDQLERAIHGIGEELEG
                     RLAELYAQEKPLEAERLKQRTTYDLEMISQMGFCSGIENYSRHLDGRAPGQPPYTLLD
                     YFPKGFVTFLDESHVTVPQLNGMYNGDRSRKQTLVDFGFRLPSALDNRPLRFEEFNGR
                     VGQVIFVSATPAEYELRESGGAVVEQIIRPTGLVDPEIEVRPARTQVDDLLGEIRKNA
                     SVGGRILVTTLTKRMAEDLTEHYEGQGVRVRYLHSDIDTMERVEILRDLRLGKFDVLV
                     GINLLREGLDLPEVSLVAILDADKEGFLRSARSLVQTFGRAARNVSGRVILYADRETG
                     SMREAMSETDRRRARQAAYNRENG"
BASE COUNT          293 a          520 c          532 g          251 t
ORIGIN      
        1 gtcatcgccg ccgtcgaccg gcccgcgctc gtgatcgccc cgaacaagac cctcgccgcg
       61 cagctctact ccgagttcaa atccctcttc cccgaaaacg ccgtcgagta tttcgtctcc
      121 tactacgact actaccaacc cgaggcgtac gttccccaca cggacaccta catcgagaag
      181 gactccgcga tcaacgagca gatcgacaag atgcggcaca gcgccacgag gtcggtgatg
      241 acccgcggcg acgtgatcgt gatcgcctcc gtgtcgtgca tctacggcct cgggtccccg
      301 gagtattacg cgcggatgac cgtccgcgtc gaggaaggcg aggagtttcc ccgcaataca
      361 ctcctgcggc ggctgatcga cctgcagtac gagcgcaacg acgtggactt ccaccgcggg
      421 acgttgcgcg tccgcggaga cgcggtggag ctgttccccg cgtacgagga ggagaaggtc
      481 cttcggatcg agtacgacga ggaccggatc gcccggatcc tccacgtgga ccccctccgg
      541 gggacgcgga tcagggagct gcgggagacg gtcatcttcc cggccagcca ctacgtgacg
      601 ccggaggatc agctcgagcg ggcgatccac gggatcgggg aggagctcga ggggcggctc
      661 gcggagctct acgcgcagga aaagccgctc gaggcggagc ggctgaagca gaggaccacc
      721 tacgatctcg agatgatctc ccagatggga ttctgctccg gcatcgagaa ctactcccgc
      781 catctcgacg ggcgcgcccc gggccagccg ccgtacacgc tcctcgacta cttcccgaag
      841 gggttcgtca ccttcctgga cgagtcccac gtgaccgttc cccagttgaa cgggatgtat
      901 aacggcgacc ggtcccggaa acagacgctg gtggatttcg ggttccggct cccctccgcg
      961 ctcgacaacc ggccgctccg gttcgaagag ttcaacggcc gggtggggca ggtcatcttc
     1021 gtctcggcga ctcccgcgga atacgaattg cgtgagagcg gcggggcggt ggtggagcag
     1081 atcatccgcc ccacggggct cgtcgacccc gaaatcgagg tccgccccgc gcggacgcag
     1141 gtggacgatc ttctcgggga gatccggaaa aacgcctccg tcggggggag gatcctggta
     1201 acgaccctca ccaagcggat ggccgaagat ctgacggagc attacgaggg gcagggagtg
     1261 cgggtgcgct acctccattc cgacatcgac accatggagc gggtcgagat cctgcgggac
     1321 ctccggctcg ggaagttcga cgttctcgtc ggcatcaacc tgctccggga ggggctcgac
     1381 ctgccggagg tctccctggt cgcgattctc gatgccgaca aggaaggttt tctccgctcc
     1441 gcccggtcgc tcgtgcagac gttcggccgg gccgcccgca acgtatcggg aagggtcatc
     1501 ctttacgcgg accgggagac cgggtcgatg cgggaggcga tgtcggaaac ggaccgccgg
     1561 agggcgcggc aggcggcgta caaccgggag aacggg
//
LOCUS       DATGYW010000145         2265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_6390, whole genome shotgun sequence.
ACCESSION   DATGYW010000145 DATGYW010000000
VERSION     DATGYW010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6390"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="VK429_01970"
     CDS             complement(<1..382)
                     /locus_tag="VK429_01970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90609.1"
                     /translation="MAASLAALIAGLLLMAGCGPKAITVGSRPFPAERPVFSDASGKT
                     LDALPADDGAIRLVFLEFPWCPACADVWKAMRVAANPFPPGTARVYRVLFDRETVLSP
                     AGRREVPPLLPASLPEGDGSEDPGA"
     gene            complement(385..708)
                     /gene="trxA"
                     /locus_tag="VK429_01975"
     CDS             complement(385..708)
                     /gene="trxA"
                     /locus_tag="VK429_01975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012376652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HLN90610.1"
                     /translation="MAGNILELNNANFQSTVEGGTPVLVDFWAPWCGPCRVIAPILEE
                     IAKEFDGKTRVGKVNVDDSPEIASKFGVRGIPTLILFKDGQIKGQMVGVNPKSNIVSL
                     VQKNL"
     gene            complement(732..1130)
                     /locus_tag="VK429_01980"
     CDS             complement(732..1130)
                     /locus_tag="VK429_01980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013810339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HLN90611.1"
                     /translation="MEQRIETILSGSKTVAVVGISDKPDRPSHGVAKYLQERGYRVIP
                     VNPLLSEVLGEKAYKSLAEIPGRVDLVDVFRKSAEVPEIAEEAVRIGARFFWMQEGVV
                     SDRACEILDAAGIPWVMDRCVKKELARRGK"
     gene            1277..1858
                     /locus_tag="VK429_01985"
     CDS             1277..1858
                     /locus_tag="VK429_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013257637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HLN90612.1"
                     /translation="MKESVVRSLKEGAELRSKMAETMPAEIVSAATAIAEAFKAGRKL
                     LLFGNGGSAADAQHIAAEFMNRFLIERPPLPAIALTTDTSVLTSIANDYTFDEIFSKQ
                     VKALGKKGDVALGITTSGSSGNVLKALRAAKKLGMTTIALTGEGGKAASLSDIALQIP
                     SRSTPRIQEAHIAVGHILCDLTDTILFKDVGKR"
     gene            1855..>2265
                     /locus_tag="VK429_01990"
     CDS             1855..>2265
                     /locus_tag="VK429_01990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90613.1"
                     /translation="MTRPLDFSRLRRTSLYSRASKVSFRGFGVPPQRGMSFARFLDGL
                     PEYLAAKDFRAVVEAIARARRRGAPVLLGIGAHFIKVGLSPLLLQGIRDGVFTAVAMN
                     GAGVIHDVELALAGKTSEDVAARLPDGSFGMARET"
BASE COUNT          370 a          773 c          723 g          399 t
ORIGIN      
        1 gcgcccctgg gtcctcggat ccgtcgcctt cggggaggga tgccgggagc aacgggggga
       61 cctcccgtcg tccggcgggc gagagcaccg tttcccggtc gaacaggacc cggtagacgc
      121 gcgccgtccc tggagggaac ggattcgcgg cgacgcgcat cgccttccag acgtccgcgc
      181 acgcgggaca ccacgggaac tcgagaaaca cgaggcggat cgctccgtcg tccgccggga
      241 gcgcgtcaag ggtcttcccc gaggcgtcgg agaatacggg acgttcggcc gggaagggcc
      301 gggatcccac ggtgatcgcc ttcggcccgc atcccgccat caaaaggagg cccgcgatca
      361 acgccgctaa ggaggcggcc attctcaaag gttcttctgc accagcgaaa cgatgttgga
      421 cttcgggttg acgccgacca tctgtccctt gatctggccg tccttgaaga ggatgagcgt
      481 cgggatcccc cgcacgccga acttcgaggc gatctccgga ctgtcgtcga cgttcacctt
      541 cccgacgcgc gtcttcccgt cgaattcctt cgcgatctcc tcgaggatcg gggcgatgac
      601 gcggcacggt ccgcaccagg gagcccagaa gtcgacgagg acgggggttc cgccctccac
      661 cgtcgactgg aagttcgcgt tgttcagttc gaggatgttc ccggccattc cgtccctccc
      721 tgcgtcctgg gttattttcc ccgccttgcc agttctttct tcacgcaacg atccatcacc
      781 cacgggatcc cggcggcgtc caggatttcg caggcgcgat cgcttacgac cccttcctgc
      841 atccagaaga agcgggcccc gatccgcacc gcttcctccg cgatctccgg cacttccgcc
      901 gacttgcgga acacgtcgac gaggtcgacc cgcccgggga tctccgcgag cgatttgtac
      961 gccttctctc cgagaacctc gctcagaagg ggattgaccg ggatcacgcg gtatccccgc
     1021 tcctgcaggt atttcgccac cccgtggctg ggccgatccg gcttgtcgga gatcccgacc
     1081 acggcgaccg tcttcgatcc ggagaggatc gtctcgatcc gctgttccat ctgtacctcc
     1141 cgcacccttt cagatgcgga tcatgctaca tcggtttttc ccgattgaaa atagatcccc
     1201 ccgtcccccg tggtgttcct tgacagcccc cgagggaaaa gattatcgtt tccctacact
     1261 cgccgggggg ctctccttga aggaatcggt cgttcgttcg ttgaaggaag gggccgagct
     1321 ccgttcgaag atggcggaaa cgatgccggc ggagatcgta tcggcggcga cggcgatcgc
     1381 ggaggcgttc aaggcgggga ggaagctcct ccttttcggc aacggcggca gcgccgcgga
     1441 cgcgcagcac atcgccgcgg agttcatgaa ccggttcctc atagagcggc cgcccctgcc
     1501 cgcgatcgcc ctcaccacgg acacctcggt tctcaccagc atcgccaacg actacacgtt
     1561 cgacgagatc ttcagcaagc aggtgaaggc cctcgggaag aagggtgacg tggctctcgg
     1621 gatcacgacc agcgggtcct ccgggaacgt cctcaaggcg cttcgcgcgg cgaagaagct
     1681 ggggatgacg acgatcgccc tgaccggcga aggagggaag gcggcgtccc tctccgacat
     1741 cgccctgcag atcccctccc ggagcacgcc ccggatccag gaggcccata tcgcggtcgg
     1801 gcacatcctg tgcgacctga ccgacacgat cctgttcaag gacgtcggca agcggtgacc
     1861 cgccccctcg acttctcgcg cctccggcgc acgtccctgt actcccgggc gagcaaggtg
     1921 tcgttccgcg gcttcggcgt cccgccgcag cgggggatgt cgttcgcccg tttcctcgac
     1981 ggcctgccgg agtatctggc cgcgaaggat ttccgcgccg tcgtggaggc gatcgcgcgg
     2041 gcccgaaggc ggggggcccc ggtgctgctc gggatcggcg cgcacttcat caaggtgggg
     2101 ctctctccgc tgcttctcca ggggatccgg gacggcgtgt ttaccgccgt ggcgatgaac
     2161 ggcgcgggag tgatccacga cgtagaactc gcgctcgccg ggaaaacgtc ggaggacgtc
     2221 gcggcccgtc tcccggacgg atcgttcggc atggcccggg agacc
//
LOCUS       DATGYW010000146         2403 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_333575, whole genome shotgun sequence.
ACCESSION   DATGYW010000146 DATGYW010000000
VERSION     DATGYW010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2403
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333575"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2403
                     /locus_tag="VK429_01995"
     CDS             <1..>2403
                     /locus_tag="VK429_01995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014855391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate synthase central domain-containing
                     protein"
                     /protein_id="HLN90614.1"
                     /translation="KGLLTGSQLPRFYPDLKNELFMSPYAVVHQRYSTNTLPTWHLAH
                     PFRIAAHNGEINTLRGNINRMRAREAILSSPLFGKDIEKLRPVINEAGSDSAIFDNVL
                     ELLVMSGRSLPHAVMMMIPEAWGIKFQMSEDKRSFYEYHSAIMEPWDGPAAMVFCDGR
                     YLGATLDRNGLRPARYTVTRDGMIVLASETGVMDFPPGRIIRRGRLQPGKMLLLDLQQ
                     KRIVPDNEIKAAISRRKPYRKWVKDNKIELRGLFVPSEIPPEDPETLRRKQHAFGYTE
                     EEIKLIITPMASRGQEAVGSMGDDAALAVLSNRPQSLFAYFKQLFAQVTNPPIDPLRE
                     ELVMSLNGFIGRERNLLDETPEHCRMLRLIQPILTPEDMLRLRGSTHPDLAAAELDML
                     FPAGGDGKALETALARLFVQADKAIRGGATLLVLTDRNMNAGRAPIPSLLATSGLHHH
                     LIRRGLRTQASIVVESGEPREVIHFALLLGYGANAICPHTALSTIRELAESEALEAPL
                     QQGEAVDKYVTSVKKGLLKTFSRMGISTLRSFIGSQIFEAVGLGKELVESYFTNTASR
                     IAGIGLSEIAAETVARHRRGFPADGRWRNADNLLDVGGVYQVRVDGERHLWTPESVYK
                     LQSATRLDDYGIYKEYAALINDQSRAHATLRSLFSFRKGTPVPLDEVEPIEKILPRFV
                     TAAMSFGSISKETHETIAIAMNRIGGRSNSGEGGEDPERNIPLPNGDSRRSRIRQVAS
                     ARFGATTEFLVNADELQIKMAQGAKPGECGQLPGHKVSPEIARIRHTVPYVTLISPPP
                     HH"
BASE COUNT          431 a          847 c          771 g          354 t
ORIGIN      
        1 caaggggctc ctgaccggat cccagctccc gcggttctat ccggacctga aaaacgaact
       61 cttcatgagc ccgtacgccg tggtccacca gcggtacagc acgaacacgc tccccacctg
      121 gcacctggcg cacccgttcc gcatcgccgc ccacaacggg gaaatcaaca cgctgcgcgg
      181 gaacatcaac cggatgcgtg cccgggaggc gatcctctct tctccgctgt tcggcaaaga
      241 catcgaaaaa ttgcgccccg tcatcaacga ggcggggagc gactccgcca tcttcgacaa
      301 cgtcctcgag ctgctcgtga tgtcgggccg gtcgctgccg cacgccgtga tgatgatgat
      361 ccccgaggcg tggggcatca agttccagat gagcgaggac aagcggtcct tctacgaata
      421 ccattccgcg atcatggaac cgtgggacgg gcccgccgcg atggtcttct gcgacgggcg
      481 ctacctgggc gccaccctcg accggaacgg gctgcgcccc gcgcggtaca ccgtgacgcg
      541 ggacgggatg atcgtcctcg cctcggagac cggggtgatg gacttcccgc cgggccggat
      601 catccgccgc ggccggctcc agcccgggaa gatgctcctg ctcgacctgc agcagaagcg
      661 gatcgtcccg gacaacgaga tcaaggcggc catctcccgc cggaagccgt acaggaagtg
      721 ggtcaaggac aacaagatcg agctgcgggg gctcttcgtc ccgtccgaga tcccccccga
      781 agacccggag acgctccggc gcaagcagca cgccttcgga tacaccgagg aggagatcaa
      841 gctcatcatc accccgatgg cgtcccgggg gcaggaggcg gtcgggtcaa tgggggacga
      901 cgcggcgctg gcggtcctct cgaaccggcc gcagtccctc ttcgcctact tcaagcagct
      961 cttcgcccag gtgaccaacc ccccgatcga cccgctccgc gaggagctgg tgatgtcgct
     1021 gaacggcttc atcggaaggg agcggaacct tctggacgag accccggagc attgccgcat
     1081 gctccgcctc attcagccga tcctcacccc ggaggatatg ctccggcttc gcggctccac
     1141 ccacccggac ctcgccgccg ccgagctcga catgctcttc ccggcgggcg gggacggcaa
     1201 ggccctcgag acggcgctgg ccaggctctt cgtccaggcc gacaaggcga tccggggggg
     1261 agcgactctc ctcgtcctca ccgacaggaa catgaacgcc ggccgcgcgc cgatcccgtc
     1321 gctgcttgcc acctcggggc tgcaccatca cctgatccgc aggggcttgc ggacgcaggc
     1381 gtcgatcgtc gtggaaagcg gcgagccgcg ggaggtcatc cacttcgcgc tcctcctcgg
     1441 gtacggcgcc aacgcgatct gcccccacac ggccctctcc acgatccgcg agctcgccga
     1501 gagcgaggcg ctggaggctc cgctgcagca gggtgaggcc gtggacaaat acgtcacctc
     1561 ggtgaagaag gggctcctca agaccttcag ccggatgggg atctccaccc tgcgctcctt
     1621 tatcggctcc cagatcttcg aggcggtggg gctggggaag gagctggtgg agagctattt
     1681 caccaacacg gcttcccgca tcgccgggat cgggctttcc gagatcgccg cggaaaccgt
     1741 tgcgcggcac cggcgcggct tcccggccga cggtcgctgg cgcaacgcgg acaaccttct
     1801 cgacgtgggc ggcgtctacc aggtccgggt cgacggcgag cgccacctgt ggaccccgga
     1861 gtcggtctac aagctccaga gcgcgacccg cctggacgac tacgggatct acaaggagta
     1921 cgcggcgctc atcaacgacc agtcgcgcgc gcacgccacg ctgcgctcgc tgttttcttt
     1981 ccgcaaggga accccggtcc ccctcgacga ggtggagccg atcgagaaga tcctgccgcg
     2041 cttcgtcacc gcggcgatgt cattcggctc catcagcaag gagacccatg agacgatcgc
     2101 catcgcgatg aaccggatcg gcggacggag caactccggg gaagggggcg aggatcccga
     2161 gcggaacatc ccgctcccga acggggacag ccgacggtcc cggatccggc aggtcgcctc
     2221 cgcgcgattc ggcgcgacca ccgaattcct ggtgaacgcc gacgagctgc agatcaagat
     2281 ggcgcagggg gccaagccgg gcgagtgcgg gcagctcccc ggccacaagg tgagccccga
     2341 gatcgcgcgg atccgccaca cggttccgta cgtgacgctc atctcgccgc cgccgcatca
     2401 cga
//
LOCUS       DATGYW010000147         1863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_333576, whole genome shotgun sequence.
ACCESSION   DATGYW010000147 DATGYW010000000
VERSION     DATGYW010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333576"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1510)
                     /locus_tag="VK429_02000"
     CDS             complement(<1..1510)
                     /locus_tag="VK429_02000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012527047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HLN90615.1"
                     /translation="MSTGLPDLDRVFTGILPGDNIVWQVDVVEDYRPFVDPFVRDAIA
                     RGKRLVYFRFARHPELVPRGIGAEIHTLHPEVGFETFTARIHKVIEEAGRGTFYVFDC
                     LSDLAADWYSDLMLGNFFMVTCPYLYDLDTVTYFALLRDGHSFDAVSSIRGTTQLLID
                     VFRHKERLYVHPLKVDRRSSPTMYLPHVRDGKAFLPLTESALLSEVLEDLSTRRVDAV
                     SRTLDIWDRKLLQAREVIDEVRLGARPRAEASEIFGRLLRMMVTRDERLVALASRLFD
                     LGDLLALRKRMIGTGLIGGKSVGMLLARAILCKTDPRWKDRLETHDSFYIGSDVFYTF
                     LVRNGCWRARRGQRNADTFMEGAEEARERILSGTFPGFLLEQFVAMLEYFGQSPIIVR
                     SSSLLEDSFGNAFTGKYESVFCPNQGSPQERLSAFLEAIRTVYASTMSPEALLYRAHR
                     GLIDRDQQMAILVQRVSGAVHGHLFYPQVAGVGLSYNPYAWSKEIDPEAGVLR"
BASE COUNT          345 a          593 c          636 g          289 t
ORIGIN      
        1 ggcgcaatac cccggcctcg gggtcgatct ccttgctcca ggcatacggg ttgtacgaca
       61 accccacccc cgccacctgc gggtagaaca ggtgcccgtg gacggcgccc gacacgcgct
      121 ggaccaggat cgccatctgc tggtcccggt cgatcagtcc ccggtgcgcg cggtacagaa
      181 gcgcttcggg gctcatcgtg ctcgcgtaca cggtccggat cgcctcgagg aacgcggaga
      241 ggcgctcctg cggcgatccc tggttcgggc agaagacgct ttcgtacttc cccgtgaagg
      301 cgttgccgaa actgtcctcg aggaggctgc tcgatcggac gatgatcggc gactgtccga
      361 aatactcgag catcgccacg aactgctcca ggaggaaccc cgggaaggtg cccgagagga
      421 tccgctccct cgcctcttcc gccccttcca tgaaggtgtc ggcattgcgc tgtccgcgcc
      481 gcgcacgcca gcatccgttg cggacgagga acgtgtagaa gacgtcggag ccgatgtaga
      541 aggaatcgtg cgtctccagc cggtccttcc agcgagggtc cgtcttgcag aggatcgcgc
      601 gggcgaggag catccctacc gactttccgc cgatcagccc cgtgccgatc atccgcttcc
      661 ggagggcgag cagatcgccg aggtcgaaca acctggaggc gagggccacc agccgctcgt
      721 cgcgggtgac catcatccgg agaagccgcc cgaagatctc cgacgcctcc gcccgggggc
      781 gcgcgccgag acggacctcg tcgatcacct cccgcgcctg gaggagcttc ctgtcccaga
      841 tgtcgagcgt gcgggagacg gcgtccacgc gccgcgtcga gaggtcctcc agcacctcgg
      901 agagcagcgc actctccgtg agggggagga acgccttccc gtcccggacg tgggggagat
      961 acatcgtcgg ggaggagcgc cggtcgacct tcagcgggtg gacgtagagg cgctccttgt
     1021 ggcggaagac gtcgatcagc agctgcgtcg tgccgcggat cgacgagacg gcgtcgaacg
     1081 agtgtccgtc ccgaaggagg gcgaagtagg tcaccgtatc gaggtcgtac aggtacgggc
     1141 aggtgaccat gaagaagttg cccagcatca ggtcgctgta ccagtcggcc gcgaggtccg
     1201 agaggcaatc gaagacgtag aaggtgcccc gccccgcctc ctcgataacc ttgtggatcc
     1261 gggcggtgaa cgtctcgaag cccacttcgg gatggagggt gtggatctcc gcgccgatcc
     1321 cccgggggac gagttccggg tggcgggcga agcggaagta gacgagccgt ttcccgcggg
     1381 cgatcgcgtc gcggacgaac gggtcgacga agggacggta atcctcgacg acgtccacct
     1441 gccagacgat gttgtcgccc ggcaggatcc ccgtgaagac ccggtcgagg tcgggcaacc
     1501 cggtgctcaa cgtctcggat ttcgcgcgcg cggccaggac gtcacccccg tacggatcga
     1561 tccgttccta aggtacgtta ccatgggaaa gaatcggccc gcggcggaac gctaagtgcc
     1621 acccatcaca aatacggtaa cgtatcggga agacagctcc gaaggcgcac gccccactcc
     1681 cgtacgaaat acgctccctg gggtacccct gcagcaggaa aaacgggggg cacagcgggg
     1741 ggccacgcag tgctccccgg tcttatttca tcgggagtac cccagggagg gaccattgtc
     1801 cgggagtggg gcagcgtatg gagtgaggca gggattgcgt cgaacggaat cgcagtgagc
     1861 ggt
//
LOCUS       DATGYW010000148         1540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_67948, whole genome shotgun sequence.
ACCESSION   DATGYW010000148 DATGYW010000000
VERSION     DATGYW010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67948"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..675
                     /locus_tag="VK429_02005"
     CDS             <1..675
                     /locus_tag="VK429_02005"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020161465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HLN90616.1"
                     /translation="KGDVKGALKGGERAMLEIVMATHAGMTTEEFAQTVKDWIATARH
                     PKTGRPYTEMVYQPMLELLTYLRANGFKTYIVSGGGIEFMRPWTGKVYGIPPEQVIGS
                     SIKTKFEVRDGKPVLVRLPEIDFIDDKEGKPIAINQHVGRRPIAAFGNSDGDLQMLQW
                     TTAGSGTRFALLVHHTDAEREWAYGRASSIGRLDMALDEAQAKGWTVADMKNDWKIIF
                     PFELPK"
     gene            794..>1540
                     /locus_tag="VK429_02010"
     CDS             794..>1540
                     /locus_tag="VK429_02010"
                     /inference="COORDINATES: protein motif:HMM:NF024827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiheme c-type cytochrome"
                     /protein_id="HLN90617.1"
                     /translation="MAAILLPTLLAAGIAFSQSPPGSPTGDNGAHSEVSAAGVTGSAG
                     CRECHERFYQLWSTSFHGLAMQTFTPKLAKEKLTEPTGDLAAGALRYRADIGGETAWV
                     VEQGPKGERKYRIDYAMGGKNVFYFLTPLEKGRLQVLPVAYDVRKKEWFLTTDSHLRP
                     FSDNAAPLPWTDPLYTFNTSCHSCHVSQVSINYDLSTDSYRTTWTEPGINCETCHNPG
                     AEHVRVARETPKGEPLKDPKLIVTRKFTVEQ"
BASE COUNT          313 a          506 c          475 g          246 t
ORIGIN      
        1 aagggtgacg tgaaaggcgc gctcaagggt ggcgaacgcg caatgctcga aatcgtcatg
       61 gccacccacg ccggcatgac cacggaggag ttcgcacaaa ccgtcaagga ctggatcgcg
      121 acggcgcggc atccaaagac cggccggcct tacacggaaa tggtctatca gccgatgctc
      181 gaactgctca cttacctccg ggcaaacggg ttcaagacct acatcgtctc cggcggaggg
      241 atcgagttca tgcgcccgtg gacgggaaag gtctatggga ttccccccga gcaggtcatc
      301 ggcagcagca tcaagacgaa gttcgaggtg cgcgacggca agcccgtgct cgtgcgcttg
      361 ccggagatcg acttcatcga tgacaaggaa ggcaaaccga ttgccatcaa ccagcacgtc
      421 ggccgccgtc ccatcgcggc cttcggaaac tccgacggcg acctgcagat gctccagtgg
      481 acgaccgccg gcagcggcac gcgtttcgcg ctcctggtcc accacaccga tgcggaacgg
      541 gagtgggcct acggtcgggc gtcctccatc ggtcggctcg acatggcgct cgacgaagcg
      601 caggcgaaag gctggactgt tgcagacatg aagaacgact ggaagatcat cttcccattc
      661 gagcttccca agtagggccc atccggctgg cggcggcgcg caacggatga tcctgttgta
      721 ttgtttctct attgattcac ctcgaggtgc cgaattgggc aggaaaccgt cccgtatccg
      781 gaaaaccacc gtattggccg caatcctcct cccgacactt ctcgcggcag ggatcgcgtt
      841 ctcgcaatcc cccccggggt cccccaccgg ggacaacggc gcccactccg aggtctctgc
      901 ggccggggtg accggctccg ccgggtgccg ggagtgccac gagcggttct accagctctg
      961 gtccacctcc ttccacgggc tggcgatgca gaccttcacc ccgaaactcg cgaaggagaa
     1021 gctcacggaa ccgacggggg atctcgccgc aggagcgctg cgctatcggg ccgacatcgg
     1081 cggggagacc gcgtgggtcg tcgagcaagg cccgaagggg gagcggaagt accggatcga
     1141 ctacgccatg ggtgggaaga acgtcttcta cttcctcacc cccctcgaga aagggcggct
     1201 ccaggtcctc cctgtcgcct acgatgtgcg gaagaaggag tggttcctga ccaccgacag
     1261 ccacctccgc cccttttccg acaacgcggc gccccttccg tggacggacc ccctttatac
     1321 cttcaacacc tcgtgccata gctgccatgt gagccaggtg tcgatcaatt acgacctttc
     1381 gacggacagc taccgcacca cctggacgga gccggggatc aactgcgaga cgtgccacaa
     1441 ccccggggcc gaacacgtgc gggtggcccg ggagaccccg aagggggaac cgctcaagga
     1501 cccgaagctc atcgtcacca ggaagttcac cgtggagcag
//
LOCUS       DATGYW010000149         2057 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_120832, whole genome shotgun sequence.
ACCESSION   DATGYW010000149 DATGYW010000000
VERSION     DATGYW010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2057
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120832"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1042
                     /locus_tag="VK429_02015"
     CDS             <1..1042
                     /locus_tag="VK429_02015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011393940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HLN90618.1"
                     /translation="KKERVGRILKMHANKREEIKTIYAGEIAAVVGLKTAYTGDTLCD
                     QDHEIILESITSPAPVISIAIEPKTKADQEKLGFSLQKLMMEDPSFQVRNDEETGQTL
                     ISGMGELHLEIIVDRLLREFKVEANVGRPQVAYRETITRQAKQEGRYIRQTGGRGQYG
                     HVWITVEPSEKGKGFEFVNKIVGGSIPREYIPAVEKGIIEAAEGGVIAGYPVVDVTVS
                     LIEGSYHEVDSSEMAFKIAGSMAFKAACKGAGPILLEPVMGVEVVCPEDFTGDVIGDL
                     SSRRGRIQGIEGRGNTQVIGAHVPLAQMFGYATDLRSKTQGRATYTMQFDHYEPAPQS
                     VSEEVIAKVKGA"
     gene            1083..>2057
                     /gene="tuf"
                     /locus_tag="VK429_02020"
     CDS             1083..>2057
                     /gene="tuf"
                     /locus_tag="VK429_02020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011340401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HLN90619.1"
                     /translation="MSKQKFERTKPHVNVGTIGHVDHGKTTLTAAITKVLASRGLADF
                     VAFDQIDKAPEERERGITIATAHVEYQTKNRHYAHVDCPGHADYIKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKVDMVDDPELLDLVELEVRELLSK
                     YEFPGDKTPIIRGSALKALECGCGKDGCEKCKCIYELTEAVDSYVPMPERAIDKPFLM
                     AVEDVFSISGRGTVVTGRVERGVVKVGDEVEIIGLRDTQKTVATGVEMFRKLLDQGQA
                     GDNIGVLLRGTKKDDVERGQVLAKPGSITPHKKFKASAYILTKEEGGRH"
BASE COUNT          422 a          557 c          741 g          337 t
ORIGIN      
        1 gaagaaggag cgggtcggcc ggatcctgaa gatgcacgcc aacaagcggg aagagatcaa
       61 gaccatctac gccggcgaga tcgctgcggt ggtcgggttg aagaccgcct acacgggcga
      121 caccctctgc gaccaggacc acgagatcat cctggagtcg atcacatctc ccgcgccggt
      181 catctccatc gccatcgaac cgaagaccaa ggcggaccag gagaagctcg gcttctcgct
      241 gcagaaattg atgatggagg acccctcctt ccaggtacgg aacgacgagg agacggggca
      301 gacgctcatt tcggggatgg gggaactcca cctcgagatc atcgtcgacc gcctgctgcg
      361 cgagttcaag gtcgaggcga acgtcgggcg tccccaggtc gcctaccgcg agacgatcac
      421 ccgccaggcg aagcaggaag ggcggtatat ccgtcagacc ggcggccgag gccagtacgg
      481 ccacgtctgg atcaccgtcg agccttcgga gaaggggaag gggttcgagt tcgtcaacaa
      541 gatcgtcggc ggctcgatcc cgcgggagta tatcccggcc gtcgagaagg ggatcatcga
      601 ggcggccgag gggggcgtga tcgccggcta ccccgtggtc gacgtcacgg tctccctgat
      661 cgagggttcg taccacgagg tcgactcctc ggagatggcc ttcaagatcg ccggttcgat
      721 ggcgttcaag gcggcctgca agggtgccgg gcccatcctc ctcgagccgg tcatgggggt
      781 cgaagtcgtc tgccccgagg atttcacggg ggacgtcatc ggggatctga gctcccgacg
      841 cggaagaatc cagggaatcg agggcagggg aaacacgcag gtgatcgggg cgcacgtgcc
      901 gctggcacag atgttcggct acgcgaccga tctgcgatcg aagacccagg gacgcgccac
      961 ctacaccatg cagttcgacc attacgagcc cgcgccgcag tccgtcagcg aggaagtcat
     1021 cgccaaggtg aagggcgcat aaccgggaat atcgggaatc cgcggggagg agggtagcgc
     1081 acatgtccaa gcagaaattc gagcgtacga agccgcacgt gaacgttggc acgatcggtc
     1141 acgtggatca cgggaagacg acgctgacgg cggcgatcac gaaggtgttg gcctcccggg
     1201 ggttggcgga tttcgtcgcc ttcgaccaga tcgacaaggc accggaggag cgtgagcgcg
     1261 ggatcacgat cgcgaccgcg cacgtggagt accagacgaa gaaccgtcac tatgcgcacg
     1321 tggactgccc gggtcacgcg gactatatca agaacatgat cacgggcgcg gcgcagatgg
     1381 acggtgcgat cctggtggtt tccgcggcgg acggtccgat gcctcagacg cgggagcaca
     1441 tccttctggc gcgtcaggtc ggtgttccgt acatcgtggt gtttctgaac aaggtggaca
     1501 tggtggacga tccggagctt ctggaccttg tggagctgga ggttcgggag ctgttgagca
     1561 agtatgaatt tcccggggac aagactccga tcatccgcgg cagcgcgttg aaggctctgg
     1621 agtgcggttg cgggaaggac ggctgcgaga agtgcaagtg catttacgag ttgacggagg
     1681 cggtggactc gtacgttccg atgccggagc gtgcgatcga caaaccgttc ctgatggcgg
     1741 tggaggacgt cttttcgatc tccggtcgcg ggacggtggt gacgggtcgt gtggagcgtg
     1801 gggtggtgaa ggtcggggac gaggtggaga tcatcgggtt gcgggacacg cagaagacgg
     1861 tggcgacggg cgtggagatg ttccgcaagc tgttggatca gggtcaggcc ggggacaaca
     1921 tcggcgttct gcttcgcggg acgaagaagg acgacgtgga gcgcgggcag gtgttggcga
     1981 agcccggatc gatcactcct cacaagaagt tcaaggcgtc ggcgtacatt ctgacgaagg
     2041 aagagggcgg tcggcac
//
LOCUS       DATGYW010000150         2304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_388154, whole genome shotgun sequence.
ACCESSION   DATGYW010000150 DATGYW010000000
VERSION     DATGYW010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_388154"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /gene="argC"
                     /locus_tag="VK429_02025"
     CDS             complement(<1..403)
                     /gene="argC"
                     /locus_tag="VK429_02025"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: protein motif:HMM:NF013298.4"
                     /note="catalyzes the reduction of N-acetyl-5-glutamyl
                     phosphate to N-acetyl-L-glutamate 5-semialdehyde in
                     arginine biosynthesis and the reduction of
                     N-acetyl-gamma-aminoadipyl-phosphate to
                     N-acetyl-L-aminoadipate-semialdehyde in lysine
                     biosynthesis; involved in both the arginine and lysine
                     biosynthetic pathways; lysine is produced via the AAA
                     pathway, lysine from alpha-aminoadipate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HLN90620.1"
                     /translation="MKRVAIFGATGYTGFELIRLLLSHPGARIEVLTSEQYFSQPIEQ
                     AFPPFKGKLAGVSFGKMERLLSAEFDVAFLALPHTLSSSVAGPLLSRGIPVIDLSADF
                     RFRSIPLYESVYGVAHKSAALAAKAVYGLPEI"
     gene            complement(556..948)
                     /gene="rpsI"
                     /locus_tag="VK429_02030"
     CDS             complement(556..948)
                     /gene="rpsI"
                     /locus_tag="VK429_02030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011341644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HLN90621.1"
                     /translation="MAQARIYATGKRKTAIARVYVKAGAGRITVNGREFEEYFPVLAL
                     RAVATQPLVLTGKRTLVDVDVNIGGGGPMSQAESVKFGIAKALQIENPELRTQLKRAG
                     FLTRDARIKERKKYGQPGARKRFQFSKR"
     gene            complement(965..1405)
                     /gene="rplM"
                     /locus_tag="VK429_02035"
     CDS             complement(965..1405)
                     /gene="rplM"
                     /locus_tag="VK429_02035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009352918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HLN90622.1"
                     /translation="MKTTKMLTRDPADQTWYVVDAEGKVLGRMATKIADVLRGKHKPT
                     FTPNSDMGDFVIVVNADKVKLTGNKMTGKVYYSHSGYMGGLKSTTPAKVLGSAHPERI
                     VEWAVRGMLPKTRLGDRLFTKLKVYVGPEHPHKAQQPKVLAVNE"
     gene            complement(1490..2143)
                     /locus_tag="VK429_02040"
     CDS             complement(1490..2143)
                     /locus_tag="VK429_02040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011940472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HLN90623.1"
                     /translation="MRSARLTNGRHLPIGKILCIGRNYSEHIKELGNATPEAPVIFIK
                     PASSVIGEGEAIVIPPYSHDCHHEVELALLIGTRGKNVPVDRAMELVAGYGVGIDLTL
                     RDVQGELKKKGLPWEIAKGFDTSCPLSAFVEASDVADPQNLRIRLTVNGVIRQDGNTS
                     MMIHRIPAIVSCMSGSFTLDPGDVILTGTPAGVSRIVPGDHLVAEIPGVATLRVSVA"
BASE COUNT          393 a          738 c          713 g          460 t
ORIGIN      
        1 ggatctcggg aagaccgtag acagctttcg cggcaagggc cgcgctcttg tgggcgacac
       61 cgtagaccga ctcgtaaagc gggatgctgc ggaaccggaa atccgccgac aggtcgatca
      121 ccgggatgcc ccgggagaga agcgggcccg caaccgacga cgacaaggtg tgcggcaggg
      181 cgaggaaagc gacgtcgaac tccgccgaca gcaggcgctc catcttcccg aaggagacgc
      241 cggcaagctt tcccttgaac ggagggaatg cctgctcgat cggctgcgag aagtactgct
      301 ccgaggtgag gacttcgatc ctcgcccccg ggtgggaaag gagcagccgg atcagctcga
      361 aaccggtgta cccggttgcc ccgaagatcg ccacgcgctt catccgtttt cccatccttc
      421 ccattgtata aggtttcgcc gggggaaacc cccgccggct tcaccccccg gacaaaaaag
      481 aagaggaagg cgggttgccc ggccttcccc ttcgggagat cgttcgattc ggggcgtctt
      541 cgccccttcc gcggcttacc gcttggagaa ctggaaccgt ttccgcgcac ccggctggcc
      601 gtactttttc cgctccttga tccgcgcgtc gcgggtcagg aagcccgcgc gcttcaactg
      661 cgtccgcagt tcggggttct cgatctgcag cgccttcgcg atgccgaatt tgaccgactc
      721 ggcctgggac atggggccgc cgccgccgat gttcacgtcg acgtcgacga gcgtccgctt
      781 tccggtcagc accaggggct gtgtcgcgac cgcgcgaagc gccagcaccg ggaagtactc
      841 ctcgaactcc cgtccgttga cggtgatgcg accggcccct gccttgacgt agacgcgggc
      901 gatcgcggtc ttccgtttcc ccgtagcgta aattctcgct tgagccatgg tacggtggtt
      961 cctcctattc gttgacggcc aaaaccttcg gctgctgcgc cttatgcggg tgttccggcc
     1021 ccacatatac cttgagcttg gtgaagagcc ggtcgcccag tcgcgttttc gggagcatcc
     1081 cgcggaccgc ccattccacg atccgctccg ggtgcgcact cccgagcact ttcgccgggg
     1141 tggtggactt caggccgccc atgtaaccgg agtggctgta gtatactttc cccgtcatct
     1201 tgttcccggt gagcttcacc ttgtcggcgt tcaccacgat gacgaaatcg cccatgtcgg
     1261 agttgggcgt gaatgtcggc ttgtgctttc cgcgcaggac gtcggcgatt ttcgtcgcca
     1321 tccggccgag gaccttcccc tcggcgtcca cgacgtacca cgtctggtcg gcaggatccc
     1381 tcgtgagcat cttcgttgtt ttcatcgcgc agaccttccc ctcgaaatca aaggtacata
     1441 tctaacagga tttgccgtgt cccgtcaagg ggaaaaggaa gctccccgat caagccaccg
     1501 atacccggag ggtggccact cccggaattt ccgcgaccag atgatccccg gggacgatgc
     1561 ggctgacgcc ggcaggggtc cctgtgagga tgacgtcgcc gggatcgagc gtgaaactgc
     1621 ccgacatgca gctgacgatg gcggggatgc ggtggatcat catcgaggtg ttcccatcct
     1681 gccgtatgac gccgttcacc gtcaggcgga tcctcaggtt ctgcgggtcc gccacatcgg
     1741 atgcctccac gaaggcggag agcggacagg aggtgtcgaa ccccttggcg atctcccatg
     1801 gcagcccctt tttcttcagt tcgccctgga catcgcgcag ggtgagatcg atgccgaccc
     1861 cgtatccggc gacaagttcc atcgccctgt ccacggggac gttcttcccc ctcgtgccga
     1921 tcaggagcgc cagttccact tcgtggtgac aatcgtgcga atacggtgga atgacaatcg
     1981 cttccccctc gccgatgacc gaagaggcgg gcttgatgaa gatcaccggc gcctcggggg
     2041 tcgcgtttcc cagttccttg atatgttcgg aatagttgcg gccgatgcag aggatcttgc
     2101 cgatggggag atgccggccg ttcgtgagac gtgctgacct catgggtgcg gctcctttac
     2161 ggttcgtcag taggacacgc gccagaggaa aaggccgtgg gggggggcgt tcatcccggc
     2221 gacggaccgg ttgcgcgccc gcaggatttc tccgacgtgg cccgtggaat gcttcccctt
     2281 ccctgcattt accaccgtcc cgac
//
LOCUS       DATGYW010000151         1586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_442459, whole genome shotgun sequence.
ACCESSION   DATGYW010000151 DATGYW010000000
VERSION     DATGYW010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442459"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..326)
                     /locus_tag="VK429_02045"
     CDS             complement(<1..326)
                     /locus_tag="VK429_02045"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011344191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase"
                     /protein_id="HLN90624.1"
                     /translation="MGSAVVAFSGGVDSSFLLHAAKEAIGDRVLAVTATSPTYPRSER
                     EEASRLARSWGVAHRLVESNELEIPGFSANPPDRCYHCKKELFGILAGIALQEGYAAV
                     CDGSNA"
     gene            complement(397..1437)
                     /locus_tag="VK429_02050"
     CDS             complement(397..1437)
                     /locus_tag="VK429_02050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90625.1"
                     /translation="MNAAAPLPIPRKAVILLSGGLDSTLAARIVRDQGIELHAIHFTS
                     PFCTCSKKGQGNGGGCRSAAQEVAVGMGIPIRTVSKGEEYLEIVKHPRHGRGSAMNPC
                     IDCRIFTLRKAKTFMEEIGASFLVTGEVVGQRPMSQRDDALRGIEKHSGCAGIILRPL
                     SALHLPPSLPEREGWVDRERLLAITGRSRKEQIRLAEEFKIGDYPCPAGGCMLTDRTF
                     SLKVRDLLDHHPSFGMHEVLLLKAGRHFRVRGMKAIVAKSEEENRRLEALCRGRDTVY
                     VAHSHPGPSVALLGGSEEERLHLLSRIFTRYGKAGSVGPYEVREISPDGERLVTVPEN
                     PDFEEVGRGLLC"
BASE COUNT          248 a          547 c          535 g          256 t
ORIGIN      
        1 tcggcgttag aaccgtcgca cacagccgcg tacccctcct gcagggcgat cccggcgagg
       61 atcccgaaca gctccttttt acagtggtag caccggtccg gagggttcgc ggagaagccg
      121 gggatctcca gctcgttcga ctcgacgaga cggtgggcga cgccccacga acgggcgagc
      181 cgcgaagcct cctcacgctc ggagcggggg taggtcggtg aagtggcggt gacggccagg
      241 acccggtctc cgatcgcctc cttcgcggcg tggaggagga acgaactgtc caccccgccg
      301 ctgaaggcga ccacggcgga ccccatccgg cggagcgccg cgagcaacgc ctcgtagcgg
      361 agcaggtcgt cccgcgtcgg agcgccgttc cctgcgtcag cagaggagtc cacgcccgac
      421 ctcctcgaag tccggatttt cgggcacggt cacgagccgc tccccgtcgg gggagatctc
      481 ccggacctcg tacgggccga ccgatcccgc cttgccgtac cgggtgaaga tccgggagag
      541 caggtggagt cgttcctcct cgcttccccc caggagcgcg acggaagggc ccgggtggct
      601 gtgcgccacg tagacggtgt ccctcccccg gcagagggcc tcgagccggc ggttctcctc
      661 ctcgcttttc gccacgatcg ccttcatccc ccgaacgcgg aaatggcgtc ccgccttcag
      721 gaggaggact tcgtgcatcc cgaaggaagg gtgatggtcg aggagatccc gcaccttgag
      781 ggagaaggtc cggtcggtca gcatgcagcc ccccgcgggg caagggtagt caccgatctt
      841 gaactcctcc gcgagccgga tctgttcctt gcgggaccgt ccggtgatgg cgagcagcct
      901 ctcccggtcc acccagcctt cccgctccgg cagcgagggg gggaggtgga gcgcggaaag
      961 cgggcgcagg atgatccccg cgcatccgct gtgcttctcg atgccgcgca acgcgtcgtc
     1021 ccgctgggac atcggccgct gccccacgac ttccccggtg accaggaagg aggccccgat
     1081 ctcctccatg aacgtcttcg ccttgcgcag ggtgaagatc cggcagtcga tgcacgggtt
     1141 catcgccgat ccccggccgt gccgggggtg cttgacgatc tcgaggtact cctcgccctt
     1201 cgacacggtc cggatcggga ttcccatccc caccgcgacc tcctgcgccg ccgagcggca
     1261 tccacccccg ttcccttgtc ccttcttgga gcaggtgcag aacggcgagg tgaaatggat
     1321 cgcgtgaagc tcgatcccct ggtcccgaac gatccgggcc gccagggtgc tgtcgagccc
     1381 gcccgagagg aggatcaccg cttttcgggg gatgggcaga ggtgcggcgg cgttcatgcg
     1441 atgcagctcc gttccggatc gtattcggcg gccgacagcg gttccgtaat ccggggagga
     1501 tccccgcagg cggggcacga ccgattgcgg acgaccgcga ggcacgacac ctcgttcgag
     1561 agcgtgtcga tcgtcagcag tttccc
//
LOCUS       DATGYW010000152         1613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_388422, whole genome shotgun sequence.
ACCESSION   DATGYW010000152 DATGYW010000000
VERSION     DATGYW010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_388422"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..867
                     /locus_tag="VK429_02055"
     CDS             <1..867
                     /locus_tag="VK429_02055"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011340946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HLN90626.1"
                     /translation="IGKLDRKIGKIRKEIFSNLTRWQITQLARHPNRPYLLDYVNLCF
                     KNFVELHGDRAFRDDPPLVCGFAELDGQRVVLIGQQKGRNTNEKIQRNFGMANPEGYR
                     KALRVMKMAEKFHLPVVTFIDTPGAFPGIGAEERGQSEAIARNLLEMSHLKTPIVVAV
                     IGEGGSGGALAIGVGDEILMMEYSVYSVISPEGCASILWRDTAKAEVAAEMMKITAPD
                     LKKFGVIDRIIPEPLGGAHRDHKAAGDALKTALLEALPPLLSMPIPQLLERRYRKFRE
                     MGAIKRKAGGAA"
     gene            864..>1613
                     /gene="pheA"
                     /locus_tag="VK429_02060"
     CDS             864..>1613
                     /gene="pheA"
                     /locus_tag="VK429_02060"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: protein motif:HMM:NF012998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HLN90627.1"
                     /translation="MTQDRLKELRVEIDAIDDRILELLNRRAKAAIEVGSIKKDRNLN
                     VYVPEREVEILRRLTSVNQGPFPNDGLKAIYREIISASLSLEKPLSVAFLGPKATFTH
                     LACLKHFGESAEYVPQINLSGVFDAVNRNAADFGVVPIENSSEGIVSNTLDMFVDYNL
                     LICGEILVEVAHDLLNVTGDIDHVRKVYSHPHAIAQCRGWLERNLREVPVFDVESTAR
                     AAELAADDPAAAAIAGEAASKIYGLKAIRKRI"
BASE COUNT          302 a          532 c          530 g          249 t
ORIGIN      
        1 atcgggaagc tggaccggaa gatcgggaag atccgcaagg agatattctc caacctcacg
       61 cgctggcaga tcacccagct ggcgcgtcac ccgaaccggc cgtacctgct cgactacgtc
      121 aacctctgct tcaagaattt cgtcgaactg catggggatc gggcgtttcg cgacgatcct
      181 cccctggtct gcggcttcgc ggagctcgat gggcagcggg tcgtcctcat cggacagcag
      241 aaaggccgca acaccaacga gaaaattcag cgcaacttcg gcatggcgaa cccggagggg
      301 tatcgcaagg ccctccgcgt catgaagatg gcggagaagt tccacctccc cgtcgtcacc
      361 ttcatcgata ccccgggggc cttccccggg atcggcgccg aggagcgcgg ccagtccgag
      421 gcgatcgcgc gcaacctcct ggagatgtcc cacctcaaga ccccgatcgt cgtggccgtc
      481 atcggcgagg gggggagcgg cggggcgctg gccatcggcg tgggcgacga gatcctgatg
      541 atggaatatt ccgtctactc cgtcatctcc cccgaggggt gcgcctcgat cctctggcgc
      601 gacacggcca aggccgaggt ggcggcggag atgatgaaga tcacggcccc ggacctgaag
      661 aagttcgggg tcatcgaccg gatcatcccg gagccgctgg gtggcgcgca ccgcgaccac
      721 aaggccgccg gcgacgcgtt gaaaacggcg ctgctggaag ccctccctcc gctgctgtcc
      781 atgccgatcc cgcaactcct cgagcggcgc taccggaagt tccgggagat gggggcgatc
      841 aagcggaagg ccggtggggc tgcttgacgc aggaccgcct gaaggagctt cgcgtcgaaa
      901 tcgacgcgat cgacgaccgg atcctcgagc tgctgaaccg ccgcgcgaag gcggccatcg
      961 aggtcgggtc gatcaagaag gatcgcaacc tcaacgtcta cgttcccgag cgggaggtgg
     1021 agatcctccg gcgcctgacc tccgtgaacc aggggccgtt ccccaacgac gggctgaagg
     1081 cgatctaccg ggagatcatc tccgcgtccc tctccctcga aaagccgctc tccgtggcgt
     1141 tccttggccc caaggccacc ttcacccacc tcgcgtgcct gaagcatttc ggcgagagcg
     1201 ccgagtacgt cccccagatc aacctctccg gggtgttcga cgcggtcaac cggaacgcgg
     1261 ccgatttcgg cgtggtgccg atcgagaaca gcagcgaggg gatcgtcagc aacaccctcg
     1321 acatgttcgt cgattacaac ctgctgatct gcggggagat cctcgtggaa gtggcgcacg
     1381 acctcctgaa cgtcacgggc gacatcgacc acgtaaggaa ggtctactcc catccgcacg
     1441 ccatcgcgca gtgccgcggc tggctcgagc ggaaccttcg cgaggtcccc gtcttcgacg
     1501 tcgagagcac ggcgcgcgcg gcggagctcg cggcggacga cccggcggcg gcggcgatcg
     1561 ccggggaggc ggcgtcgaag atctacgggc tgaaggcgat ccggaagcgg atc
//
LOCUS       DATGYW010000153         2007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_68570, whole genome shotgun sequence.
ACCESSION   DATGYW010000153 DATGYW010000000
VERSION     DATGYW010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68570"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1090)
                     /locus_tag="VK429_02065"
     CDS             complement(<1..1090)
                     /locus_tag="VK429_02065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013704621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLN90628.1"
                     /translation="MKTDPHAGLTTFGTPAQGLIGATLGFFIGFAAVSLFGPTAKNLK
                     GILGLSPLEVGFLVAAPSLSGSLLRIPFSAWVDTTGGKKPFLVLLLLSIIGMAGLFLT
                     LRSYYPARMTPSFYPLILMLGVLCGCGIATFSVGIGQVAYWFPKARQGAALGTYAGIG
                     NLAPGIFTLLLPFALVTMGLTWCYLSWLAFLAAGAVVYAVIGRNAWYFQMIARGATVG
                     EARAESALHGQEIFPSGSLVESLLLSARNWKTWALVAIYFTTFGGFIAMTAWLPVYWT
                     SFYSVTPILAGMLAGVYSIVTSLVRVGGGYLSDRIGGETTGILALGIMAAGAILMTLS
                     GEFHLSVAAEIIMAIGMGVANAAVFKLVA"
     gene            1147..1965
                     /locus_tag="VK429_02070"
     CDS             1147..1965
                     /locus_tag="VK429_02070"
                     /inference="COORDINATES: protein motif:HMM:NF014325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HLN90629.1"
                     /translation="MFFGNRLNPSRRICCSIVTGEDTSIRTTPTGILIVFFRQLRLPA
                     LLFAAFIFLCVLAYSSLEGIKWQDALFWIFHPHAIHVDKVRDATKFFSLMVSLGVFAF
                     QIWVAERVLVTIFRKQGREAWKLMVNEANLEKVRDHFIICGYGQVGRTVVDQLDRLNI
                     PFVLIETNEGLYHQLLKDGIPVVHGDAKRHDTLQTAGIDRARGICVLIDNDADNLYIT
                     VTAKAMNPKLRIITRAGQQRYAQAMRNSGADEVIIPEHEGGLMVGRMIEKYSIV"
BASE COUNT          438 a          590 c          637 g          342 t
ORIGIN      
        1 gggcgaccag tttgaagacg gccgcgttgg ccacccccat cccgatggcc atgatgatct
       61 cggcagccac cgaaaggtgg aattccccgg aaagggtcat aaggatcgcc ccggccgcca
      121 tgatgcccaa tgcaaggatc cccgtggtct ccccgccgat gcggtcggaa aggtaccctc
      181 cgccgacccg gacgagggag gtgacgatcg agtagacacc ggcaagcatc cccgcgagga
      241 tcggggtaac cgaatagaag gaagtccagt aaacggggag ccaggcggtc atggcgatga
      301 acccgccgaa ggtcgtgaag tagatcgcca cgagagccca cgttttccag ttcctcgccg
      361 agagaagaag gctttccaca aggctgccgg acgggaagat ttcctggccg tggagcgctg
      421 attccgctct cgcctcaccc accgtcgctc cccgtgcaat catctggaag taccaggcgt
      481 tccggccgat gaccgcgtac acgacggccc ccgctgcaag gaaggcgagc caggacagat
      541 agcaccaggt aaggcccatg gtcacgaggg caaagggcag gaggagcgtg aaaattccgg
      601 gggcgaggtt tccgatcccg gcgtaggtgc ccagcgccgc cccctgccgg gcctttggga
      661 accagtacgc cacctggccg atcccgacgg aaaatgtggc gatcccgcac ccgcacagta
      721 ccccgagcat gaggatcaac gggtagaacg agggggtcat ccgggccgga tagtaggagc
      781 ggagggtcag aaaaagcccg gccatgccga tgatggagag aaggaggaga accaggaagg
      841 gcttcttccc accggttgta tccacccatg cggagaacgg gatccgaagc agggatcccg
      901 aaagggaggg ggcggccacg aggaaaccga cttcgagggg gctgaggccc aggattccct
      961 tgagattctt cgccgtggga ccgaagaggg agaccgcggc aaagccgatg aagaacccaa
     1021 gggtggcgcc gatcagtccc tgggccggcg ttccgaacgt cgtcaagcct gcgtgcggat
     1081 ccgttttcat tttggccttt cctcccggaa ccggtccagt ggcccatctg aattctaccg
     1141 gaaatcgtgt ttttcgggaa tcgactgaat ccgtcccggc gaatttgttg tagtatcgtt
     1201 acaggggagg atacgtcgat tcgaacgaca ccgaccggta tcctgatcgt cttcttccgg
     1261 cagctgcggc tgcccgccct gctgtttgcc gccttcatct tcctctgcgt gctggcctac
     1321 tcgagcctgg aagggatcaa gtggcaggac gcgctgttct ggatcttcca tccccatgcg
     1381 atccatgtcg acaaggtaag ggatgccacg aagttcttct ccctgatggt ctcccttggg
     1441 gtcttcgcct ttcagatctg ggtcgcggag cgggtgctcg tcaccatttt ccgaaaacag
     1501 ggaagggagg cgtggaaact gatggtcaac gaggcgaacc tcgaaaaggt ccgggaccat
     1561 ttcatcattt gcggatacgg tcaggtgggc agaaccgtcg tcgaccaact cgatcgcctg
     1621 aacatcccct ttgtcctcat cgaaacgaac gaagggctgt accatcagct gctcaaggat
     1681 ggcatcccgg tcgtccatgg ggacgcgaag cgacacgaca cattgcagac ggcggggatt
     1741 gacagggcgc ggggcatctg cgtcctgatc gacaacgatg cggacaacct gtatatcacg
     1801 gtgacggcca aggcgatgaa ccccaaactg aggatcatca cccgggcagg ccagcagcgg
     1861 tacgcccagg ccatgcggaa ttccggcgcg gacgaggtga tcatccccga gcacgagggg
     1921 ggcttgatgg tgggaagaat gatcgagaaa tactctatcg tttaggaatc ccgggaaacc
     1981 ggcggcccgc aagcactccc cgcaccg
//
LOCUS       DATGYW010000154         2408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_281253, whole genome shotgun sequence.
ACCESSION   DATGYW010000154 DATGYW010000000
VERSION     DATGYW010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281253"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1109)
                     /gene="dnaN"
                     /locus_tag="VK429_02075"
     CDS             complement(<1..1109)
                     /gene="dnaN"
                     /locus_tag="VK429_02075"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HLN90630.1"
                     /translation="MNFTVDRDLLIDVLTGIQGVAERRHTMPVLSHALITIGGGNLTV
                     VSSDLEIVVRCLQPVPAGEPGSIALPARKLLDIAKVLPKESSVTVTGKEGNYVEISSG
                     RSHFRLAGLPSQEFPEMPEKPSGKTVSVDGDTFRKLSERVVPFASSDETRYNLAGILL
                     ERAETETGSMLRMVATDGHRLAMADGEVGNIGELLASRKILVPKKGILEIRKLAESGP
                     GSIELSASEKFLFAAKGDTEVWVRLLDADFPDYRQVVPKENLLTATVSRDAFAEVLRR
                     VAVMAPDKVHSVKLSFSGKQLEVSSTSPDQGEARDLLESEYEGPAMKIGFNGRYLQDA
                     VSGVSEEKMVLQLKDEVSQVILRPEKERNYLAIVMP"
     gene            complement(1296..>2408)
                     /gene="dnaA"
                     /locus_tag="VK429_02080"
     CDS             complement(1296..>2408)
                     /gene="dnaA"
                     /locus_tag="VK429_02080"
                     /inference="COORDINATES: protein motif:HMM:TIGR00362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HLN90631.1"
                     /translation="GIEEEDPHSPFPASSRLLQLPEETATRTRAVFGPLNSRYTFDRF
                     VIGTGNQFAHAASVAVANDPGNSYNPLFIYGGVGLGKTHLLHAIGNAALEKSPRLKVC
                     YIPAEKFTNDLIASLRSGKMSDFKERYRNVDLLLMDDVQFIAGKRSTQEEFFHTFNEL
                     YSSRRQVVVSSDKFPKEIPDLEERIQSRFEWGLVADIQAPDIETRLAILNRKAEAENI
                     ALPEDVALYLATMVKNNIRELEGCLIRIGAHASLTRKEINLDLAKTILAPVLGTGGRE
                     VSPDQIQKAVAEHYGVKVSELRSDRKHKVVAMPRQVAMFLMREMTRCSFPDIGKQFGG
                     RDHTTAMYAVKKIEKKLADDVSLRNTLDILRKKIEG"
BASE COUNT          417 a          762 c          737 g          492 t
ORIGIN      
        1 ggcatcacga tcgccaggta attgcgctcc ttctccggcc gaaggatcac ctgcgagacc
       61 tcgtccttca actgcaggac catcttctcc tccgaaactc ccgaaaccgc gtcctgcagg
      121 taccgtccat tgaacccgat cttcatcgcg gggccttcgt actccgactc cagaaggtcc
      181 ctggcctccc cctggtccgg gctggtcgag gagacttcca gttgcttccc ggagaaggag
      241 agcttcacgc tgtgcacctt gtcgggcgcc atgacggcga cgcggcgcag cacctcggca
      301 aaggcgtccc gcgacaccgt ggccgtcagc aggttctcct tcgggacgac ctgccggtag
      361 tccgggaaat cggcatcgag cagccgcacc cagacctccg tgtccccctt cgcggcgaaa
      421 agaaacttct ccgacgcgga cagttcgatg gaaccgggcc cgctctccgc gagcttgcgg
      481 atctcgagga tccccttctt ggggacgagg atcttgcgcg acgcgaggag ctcgccgatg
      541 tttccgacct cgccgtcggc catcgccagc cggtgcccgt ccgtagccac catgcgcagc
      601 atcgatcccg tttccgtctc ggcccgttcg agcaggatcc ctgcgaggtt gtaccgtgtt
      661 tcatcggagg aggcaaacgg cacgacgcgc tcggaaagtt tccggaaggt gtccccgtcg
      721 accgataccg tcttccccga aggcttctcc ggcatttcgg ggaattcctg ggagggcagg
      781 cccgcgaggc ggaaatggga ccggcccgag gagatctcga cgtagttccc ctctttcccc
      841 gtcaccgtca ccgaggattc cttcggcaat accttcgcta tgtccagcaa cttgcgggcc
      901 ggaagggcga tcgacccggg ttcgccggcg gggaccggct gcaggcatcg gacaacgatc
      961 tcgagatccg acgagacgac cgtcaggttc ccgccgccga tcgttatcaa cgcatgggat
     1021 agaaccggca tcgtgtgccg tcgttccgcg actccctgga ttccggtgag cacgtcgatg
     1081 agcaggtctc tgtccacagt aaagttcatc gtcttcctct tcctgtctta agaattgaaa
     1141 aggccgtagt catagcaggg ggtgtgcgct ctgtggaaaa cggggcgggg acgccacgca
     1201 ccgggggacg gggatgttgg gggttctgtg cgaaacacag cggtgggaag acacggtctg
     1261 tggacagcgg tgcccccttc tctttctcca caaggttatc cctcgatttt cttccggagg
     1321 atgtccagcg tgttccttaa agatacatcg tctgcgagtt tcttctcaat tttttttacg
     1381 gcgtacatcg cagtggtgtg atcacgaccc ccgaactgct tcccgatgtc gggaaaagag
     1441 cagcgcgtca tctcgcgcat caggaacatt gccacctggc gcggcatcgc gaccaccttg
     1501 tgcttccggt cggaacgcag ctcggagacc ttcacgccgt aatgctccgc gaccgctttc
     1561 tggatctggt cgggggaaac ctccctcccg cctgtgccga gaacgggggc aaggatcgtt
     1621 ttcgccaggt cgagattgat ctcctttcgg gtcagcgagg cgtgggcccc gatccggatg
     1681 agacaccctt caagttcgcg gatgttgttt ttcaccatgg tcgccagata caacgccacg
     1741 tcctcgggca gcgcgatgtt ttccgcttcc gccttccggt tgaggatcgc cagccgtgtc
     1801 tcgatgtcgg gcgcctggat gtcggcgacg aggccccact cgaagcgcga ctggatccgc
     1861 tcctcgaggt ccgggatctc ctttgggaac ttgtcgctgg agaccacgac ctgccgtcgg
     1921 gaggagtaca gttcattgaa ggtgtggaag aactcctcct gggtgcttcg cttccccgcg
     1981 atgaactgca cgtcgtccat cagcagcagg tcgacgttgc ggtatcgttc cttgaaatcg
     2041 gacatcttcc cggagcgcag ggatgcgatc aggtcgttcg tgaacttctc ggcggggatg
     2101 tagcacacct tgaggcgcgg ggacttctcc agcgccgcgt ttccgatggc gtggagcagg
     2161 tgcgtcttcc ccaagccgac ccccccgtaa atgaagaggg ggttgtagct gtttccgggg
     2221 tcgttcgcca ccgcgacgga ggccgcgtgc gcgaactggt ttcccgtacc gatgacgaac
     2281 cggtcgaacg tgtaccggct gttcagcgga ccgaacaccg cacgggtgcg cgtggcggtc
     2341 tcctcgggca gctgcagcaa ccgggacgac gcgggaaacg gggaatgagg atcctcctcc
     2401 tcgatccc
//
LOCUS       DATGYW010000155         2984 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_68622, whole genome shotgun sequence.
ACCESSION   DATGYW010000155 DATGYW010000000
VERSION     DATGYW010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68622"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..292)
                     /locus_tag="VK429_02085"
     CDS             complement(<1..292)
                     /locus_tag="VK429_02085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011938749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HLN90632.1"
                     /translation="MEWHRRHVLGLSDFHPEEMEFVIDTARSMEEVLTRDIKKVPALR
                     GKTVVNLFFEASTRTRTSFEIAGKRLSADVVNFSSGTSSVTKGETLLDTARNI"
     gene            complement(296..856)
                     /gene="pyrR"
                     /locus_tag="VK429_02090"
     CDS             complement(296..856)
                     /gene="pyrR"
                     /locus_tag="VK429_02090"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012635877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HLN90633.1"
                     /translation="MKKTGLKTLLDGKSVERVLSRLTHEIIEKNKGAGQIVLVGIASG
                     GIPLSQVIRRKIHVIEGVDVPTGFVDITLYRDDLNRAGYQTRMKRTEIPFSIDDKKVI
                     LVDDVLYTGRTIRAAMDALIDFGRPRNIQLAVLIDRGHRELPIRADFVGRNVPTSRTE
                     TVLVRVEGTPEEWTVQLKEDPPGKGE"
     gene            complement(1050..1721)
                     /gene="lepB"
                     /locus_tag="VK429_02095"
     CDS             complement(1050..1721)
                     /gene="lepB"
                     /locus_tag="VK429_02095"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011697408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HLN90634.1"
                     /translation="MRQNIPVGVTVAKKGKAREYAEAFGVALIIALIVRTLFLQAFKI
                     PSGSMEDTLLIGDHIFVNKFIYGYHVPYTKGRILAFTTPKRGDIVVFVFPEDPSKDFI
                     KRVIGTPGDVVEVRQKTVYINGAPLVEGYTRFADGKYTDNFIRGRDNMPPVRVPHGKL
                     FMMGDNRDRSYDSRFWGFVDMDAVIGKALFIYFSIDWNRGIGWADVGRFPELVRWDRI
                     GRVLH"
     gene            complement(1725..>2984)
                     /gene="lepA"
                     /locus_tag="VK429_02100"
     CDS             complement(1725..>2984)
                     /gene="lepA"
                     /locus_tag="VK429_02100"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010941921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HLN90635.1"
                     /translation="AIPPPEGDPDAPTKALIIDSWFDNYAGVVVLARVLDGAIRSGQR
                     VTFMATGNSFEVQKVGVFSPHPKELQTLGTGEVGFVIANIKELTETKVGDTITDTRHP
                     TARPLPGFKVVRPMVFAGVYPLASDQSPQLRTAIDKLRLNDSSFTAEPESSVALGFGF
                     RCGFLGLLHMEIVQERLEREYDVELITTAPTVGYHAVKIDGTVLEVDSPARLPEPLEL
                     DHIEEPIIHATIHLPAEFLGNVLKLCEERRGVQRQMKFVSAARVILEYELPLNEIVLD
                     FYDKLKTASRGYASMDYDFLRFQQSNLVRLDILLNGDKVDALSLIVHRDNAYPKGRDV
                     TERLRKLIPRQMFEVVIQAAIGGKIIARESVKAIRKNVIAKCYGGDISRKRKLLEKQK
                     EGKKRMKQVGSVEIPQEAFLSILKVKE"
BASE COUNT          537 a          934 c          919 g          594 t
ORIGIN      
        1 cgatgttccg ggccgtgtcg aggagcgtct cccccttcgt gacgctcgag gtgccggaac
       61 tgaagttcac cacgtcggcg gagaggcgct tcccggcgat ctcgaacgag gtccgtgtcc
      121 gcgtgctggc ctcgaagaag aggttgacca cggtcttgcc gcgcagggcg gggaccttct
      181 ttatatcgcg cgtgagcacc tcttccatcg accgcgcggt gtcgatgacg aactccatct
      241 cctccgggtg gaagtcggac agcccgagga cgtgtcggcg atgccattcc atggcctact
      301 cccccttccc tggcggatct tccttcaatt ggaccgtcca ttcctccggc gtcccttcga
      361 cacgcaccag gacggtctcc gtccgggacg tggggacgtt ccgtccaacg aagtcggcgc
      421 ggatggggag ctcgcggtgc ccccggtcga tgaggaccgc cagctggatg tttcgggggc
      481 ggccgaagtc gatcagcgca tccatggccg cccggatcgt ccgcccggtg taaaggacgt
      541 cgtcgacgag aatcaccttc ttgtcgtcga tggagaaagg aatctccgtc cgcttcatgc
      601 gcgtctggta tcccgcgcgg ttaaggtcgt cccggtagag ggtgatgtcg acgaacccgg
      661 tggggacgtc gacaccttcg atcacatgga tcttccggcg gatcacctgg gaaaggggga
      721 ttccgcccga tgcgattccg acgaggacga tctgccccgc ccccttgttc ttctcgatga
      781 tctcgtgggt cagccgggag aggacgcgtt caacactctt gccgtcaagg agggttttca
      841 ggccggtttt cttcattggg tccgcctcgt gtcccggccg gtgtgccggc gtcgggagaa
      901 aaaaaaatgc ctctccggcg ttgcggagag gcacagtcgt gatcggcaac tcttcatcct
      961 ttgctaacct cacgggatta gcttaaaagg ccaaacggga tagtaccctc atcctcttcc
     1021 ggagtcaacg gcaaaggaaa ggacgggggc taatgcaata cgcgtccgat ccgatcccaa
     1081 cggacaagct ccgggaaacg ccccacgtcc gcccatccga tgccgcgatt ccagtcgatc
     1141 gagaagtaga tgaacagggc cttgccgatg acggcgtcca tgtcgacgaa cccccagaaa
     1201 cgggagtcgt acgaccggtc gcggttgtcc cccatcatga agagtttccc gtgaggcacc
     1261 cgcacggggg gcatgttgtc ccttccgcga atgaaattgt cggtgtattt tccgtccgcg
     1321 aaacgcgtgt agccttccac aagaggggcc ccgttgatgt agaccgtctt ctgccggacc
     1381 tcaacgacgt ctcccggagt cccgatgaca cgcttgatga aatccttgct cgggtcctcg
     1441 gggaagacga agaccacgat gtcgccccgt ttcggcgtgg tgaaggcgag gatccgtccc
     1501 ttcgtgtacg gcacgtggta cccgtagatg aacttgttga cgaagatgtg gtcaccgatc
     1561 aggagggtgt cctccatgga gccggaagga atcttgaacg cctgcagaaa cagggtccgg
     1621 acgatcaggg cgatgatcag cgcgacgccg aacgcctcgg cgtactcccg cgccttcccc
     1681 ttcttcgcca cggtcacccc caccggaatg ttttgccgca ctggctactc cttgaccttg
     1741 aggatggaga gaaacgcttc ctgggggatc tcgacggagc cgacctgctt catccgcttc
     1801 ttcccttcct tctgcttctc caggagcttc cgctttctcg agatgtcgcc gccgtagcat
     1861 ttcgcgatga cgttcttccg gatcgccttg accgactccc tcgcgatgat cttgccgccg
     1921 atcgccgcct ggatgaccac ctcgaacatc tgtcggggga tcaatttccg caggcgctcc
     1981 gtgacgtccc gccccttcgg ataggcgttg tcccggtgca cgatgagcga aagggcatcc
     2041 accttgtccc cgttgagcag gatgtccagc cggaccaggt tggactgctg aaaccggaga
     2101 aagtcgtaat ccatcgaggc gtacccgcgg gaggcggtct tgagcttgtc gtagaagtcg
     2161 aggacgatct cgttcagcgg cagttcgtac tcgaggatga cccgggcagc cgagacgaac
     2221 ttcatctgtc gctgcacgcc ccgccgctcc tcgcaaagtt tgaggacgtt tccaaggaat
     2281 tccgccggca ggtggatagt cgcgtggatg atcggttcct ctatatggtc aagctcgagc
     2341 ggctccggta gccgggccgg gctgtcgact tccagaaccg tgccgtcgat cttgaccgcg
     2401 tggtacccga ccgtgggggc cgtcgtgatg agctccacat cgtattcgcg ctccagccgc
     2461 tcctggacga tctccatgtg gagcagcccg agaaatccgc accggaaacc gaatcccagc
     2521 gccacggagc tctccggctc cgccgtgaac gaggagtcgt tcaggcgaag cttgtcgatc
     2581 gccgtccgca gctgggggga ctgatcggat gcgagggggt agacacccgc gaacaccatc
     2641 ggccggacga ccttgaatcc cgggagcggc cgggcggtgg gatgacgcgt gtcggtgatc
     2701 gtgtccccta ccttcgtctc ggtcagttcc ttgatgttgg cgatcacgaa gccgacttcc
     2761 ccggtcccca gcgtctgcag ctccttcgga tggggggaga agacaccgac cttctgcacc
     2821 tcgaacgaat tccccgtcgc catgaaggtg acccgctggc cggaccggat ggcgccgtcc
     2881 agaacacgcg cgagaacgac cacgccagcg tagttgtcga accaggaatc gatgatcaac
     2941 gccttggtcg gggcgtccgg atccccctcg gggggaggaa tcgc
//
LOCUS       DATGYW010000156         1547 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_68635, whole genome shotgun sequence.
ACCESSION   DATGYW010000156 DATGYW010000000
VERSION     DATGYW010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68635"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="VK429_02105"
     CDS             complement(<1..285)
                     /locus_tag="VK429_02105"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009965147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HLN90636.1"
                     /translation="MDLYGWMQLALFLGLLLLVTRPMGVHLYRVLDPQGKTFLDPVLK
                     PVERLLYRLMRVDPRSEQDWKRYAVSLLLFSLVGLLFTYAILRLQRLLPLN"
     gene            complement(468..>1547)
                     /locus_tag="VK429_02110"
     CDS             complement(468..>1547)
                     /locus_tag="VK429_02110"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN90637.1"
                     /translation="DQAKLLRVQRATQQALNSLPDVIAVLDPGGVIEVSTEAAREAFG
                     LKPATRLQDLPYPWLTDLFEQALRVGRPTGARETSGVVQHFVRGEERFFHPEAIPIMD
                     SDKQTAGVVLVLSDVTRQRHQDELKGGVISTVSHQLKTPLTSVRMALHLLLEEKVGPL
                     TEKQAELLVAAREEAERLDRILGELLDIGRIESGKAPMELRPVQPQELVSEAVEPYRN
                     AARDGGVSLTVALPDALTRVWVDPTQIAHVFANLLSNALKYTLPGGSISITAKEEEEF
                     VRFRISDTGVGIPDRYLPRIFEQFFRVPEQGPGTGVGLGLAIVKEIVEAHGGTVGVES
                     REGTGSTFHFTLRVADHSAMERRQT"
BASE COUNT          285 a          504 c          483 g          275 t
ORIGIN      
        1 gttgagcggt agcaggcgct gcagtcgaag gatggcatag gtgaagagga gacccaccag
       61 gctgaacagg aggagggaaa cggcgtaccg cttccagtcc tgctcggacc tggggtcgac
      121 acgcatcagc cggtagagga gccgctcgac gggtttcaac acagggtcga ggaacgtctt
      181 cccttgcggg tccaggaccc ggtacagatg cacgcccatc ggccgggtga ccagcaggag
      241 aaggccaagg aaaagcgcaa gctgcatcca tccgtagaga tccatgggga gtcctcttcc
      301 taaaatttct cgggtctgac gaccgagacg agcagatacc cgaccagcag gacgccgacg
      361 atgccgacga cgatctccag cacgggttca catcctttcc agggagtgcg cgaacagggc
      421 gcacaacccg aacgctgcga tggtaatcac cagatagacc ccgtcgatca tgtctgtctc
      481 ctttccatgg cgctatggtc ggccacccgc agggtaaaat ggaacgtgct tcccgtccct
      541 tcccggcttt ccaccccgac ggtccctccg tgggcttcaa cgatctcctt tacgatggcc
      601 aggcccaacc cgacccccgt ccccggtccc tgctcgggga cgcggaagaa ctgttcgaag
      661 atccggggga gatatctgtc ggggatccct actccggtgt cggaaatccg aaaccggacg
      721 aactcctctt cctccttcgc ggtgatggag atcgatccgc cggggagggt gtacttcagg
      781 gcgttcgaaa gcaggttggc gaacacgtgg gcgatctggg tcggatccac ccacaccctc
      841 gtcagggcgt ccggaagggc gaccgtcagg gacactcccc cgtcccgggc cgcgttccgg
      901 taaggttcca ccgcttccga aaccagctcc tgcggctgaa ccgggcgaag ctccatcgga
      961 gccttgccgg attcgatccg gccgatgtcg aggagctctc cgaggatccg gtccaaccgt
     1021 tcggcttcct cccgcgcggc cacgaggagt tccgcctgct tctcggtgag gggacccacc
     1081 ttctcctcca ggagcaggtg caacgccatg cggacggagg tcagcggcgt tttcagctgg
     1141 tgggaaaccg tcgagatgac gccgcctttc aattcgtcct ggtgcctctg gcgcgtgaca
     1201 tcgctcaata ccaggacgac ccccgccgtc tgcttgtcgg aatccatgat cggtatcgct
     1261 tccgggtgga agaaccgttc ttccccgcgg acgaaatgct ggaccacccc ggatgtctcc
     1321 cgggctcccg ttgggcggcc gacccggagg gcctgttcga acagatccgt caaccatgga
     1381 tacgggaggt cctgaagccg ggtggccggc ttcagtccga acgcctccct tgcggcttcc
     1441 gtcgagacct cgatcacgcc gccggggtcc aggacggcga tcacgtcggg caggctgttg
     1501 agcgcctgct gggtggcccg ctgcacccga agcagcttcg cctggtc
//
LOCUS       DATGYW010000157         1608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_333837, whole genome shotgun sequence.
ACCESSION   DATGYW010000157 DATGYW010000000
VERSION     DATGYW010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333837"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..607
                     /locus_tag="VK429_02115"
     CDS             <1..607
                     /locus_tag="VK429_02115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90638.1"
                     /translation="KGIVSTHPPVGERIELLAGMGDGILPEVVEGGEPEARDPSPDVP
                     VPPGKQASEPGVLEGEPKAGFLDASLYGIAAGSVAIAVLTVANCLFLVLGSGKYRTGM
                     ITAFQPPAALAAGFSARRGGVSGLIALGFAVLVFLFSWVLYAPLLPFMPDSTLDPLRW
                     ILWSLFSDIAVVFMAAAAGASLDRWAAWVRGCFENLLKRFG"
     gene            724..>1608
                     /locus_tag="VK429_02120"
     CDS             724..>1608
                     /locus_tag="VK429_02120"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HLN90639.1"
                     /translation="MPESGAPPANSAIADSRTESLARKFIVTFSAMFLVPLLVAVYLF
                     TEYATGTLRSPAQIIVFILSMILLGAAGFLAIRSVVTALLRALRDAEAIANGDISRRL
                     SSDGTSEINQLAKHFNQVISRLEQAVKSLQASRKQTHDLLAQLCASGSQPGDMTGIFE
                     TCLNTLLSMAGLQAGVLFIVSPGGETMKVRVLTDLPEALKGAVIPLDHGVAGWVASHG
                     QMVTVSESVPWKRGELSEVEKCMSCSLHVPMTATGRTRGVISIGLREGQKEIPADDIL
                     TIRSLANQVAVALENAELK"
BASE COUNT          275 a          490 c          516 g          327 t
ORIGIN      
        1 gaaggggatt gtatcgaccc atccccccgt gggggagcgg atcgaactgc tcgccgggat
       61 gggggacggg atcctcccgg aggttgtgga gggaggggaa ccggaggcgc gcgacccctc
      121 ccctgatgtc cccgttcctc cggggaagca ggcctccgaa cccggggtat tggagggtga
      181 gccgaaagcc ggtttcctcg acgcgtccct ttacggcatc gccgcgggtt ccgtggccat
      241 cgcggtcctg accgtggcga attgcctttt tctggtcctg gggtcgggga agtatcggac
      301 cgggatgatc acggcatttc agccgccggc ggcgctggct gccggattct cggcgcggag
      361 gggaggggtt tcgggtctca tagccttggg attcgcggta ctggtatttc tgttttcctg
      421 ggtgttgtac gcccccctgc tgccgttcat gccggattcc acgctggatc cgttgcggtg
      481 gatcctgtgg tccctcttca gcgacatcgc ggtagttttt atggcagccg ccgccggggc
      541 ttcgctcgat cgatgggccg cctgggtgag ggggtgcttc gaaaatctgc tcaaaaggtt
      601 cgggtagatc ttcatccttc ggtaaagttt tccaccggta tttccgatat atagatggcg
      661 gatcgacggg tacggcatcg tttccgaacc ggattccgca tcacgagaaa aggagaggcg
      721 gcattgcccg aatccggtgc gccccccgcg aattccgcga tcgccgattc gaggaccgaa
      781 tcgcttgcga gaaagttcat cgtcaccttt tccgcgatgt tcctcgttcc ccttctggtt
      841 gcggtctatc tcttcactga atacgcgacc ggaacgctgc ggagtcccgc ccagataatc
      901 gtctttatcc tctccatgat cctccttggg gcggcgggat ttctcgccat acggtccgtc
      961 gtcacggccc tcctgcgcgc cttgcgggac gccgaagcca tcgccaacgg cgacatttcg
     1021 cgtcggctca gttcggacgg gacatcggag atcaaccagc tcgcgaagca cttcaaccag
     1081 gtcatcagcc ggctcgagca ggccgttaaa agccttcagg cctcccggaa gcagacgcac
     1141 gaccttctgg cacagctatg cgcctccggc agccagcccg gcgacatgac aggcatattc
     1201 gagacctgcc tgaacaccct cctgtccatg gccgggctgc aggctggagt ccttttcatc
     1261 gtctcccccg gcggggagac gatgaaagtg cgggtcttga cagacctgcc cgaggcgctg
     1321 aagggcgccg tgatcccctt ggaccacggg gtcgcgggat gggtcgcatc ccacggacaa
     1381 atggtgaccg tctcggaatc ggtgccgtgg aagagggggg agctttcaga ggtggaaaaa
     1441 tgcatgtcct gctccctcca cgtccccatg accgccacgg gcaggacacg tggcgtcatc
     1501 agcatcggcc ttagggaggg gcagaaggag atcccggccg acgacattct gacgatccgg
     1561 agcctggcca accaggtcgc ggtcgccctg gaaaacgcgg aactgaag
//
LOCUS       DATGYW010000158         4023 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_442885, whole genome shotgun sequence.
ACCESSION   DATGYW010000158 DATGYW010000000
VERSION     DATGYW010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4023
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_442885"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..486)
                     /locus_tag="VK429_02125"
     CDS             complement(37..486)
                     /locus_tag="VK429_02125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90640.1"
                     /translation="MRHFLVLLALSYLGASLCVWGLSGFVPWFLLPDFPFLAIVFSGL
                     FVPGIAGFLCALPPALFREITASAPSWSMFLGSMALYFASREIGRRFHLRNEPSLLSA
                     VVSLLAAESFSVALLLPLGRAGGRPDRLDLPDRRSPLPGPVGPLAPG"
     gene            complement(483..1328)
                     /gene="mreC"
                     /locus_tag="VK429_02130"
     CDS             complement(483..1328)
                     /gene="mreC"
                     /locus_tag="VK429_02130"
                     /inference="COORDINATES: protein motif:HMM:TIGR00219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HLN90641.1"
                     /translation="MRSFFRNWWRLLVAVALLVAAIQVFVRPSPALERVEPVRDAGVA
                     LFRPFYSAADFLRGGFSGVWNRYVALVGVSRENDRLRKEVTELRERLHETRDAVLENR
                     RLKELLRYSETVERRTLGARVVGHDVSPWFRAIFLGAGSESGVEPGMSVVTPYGAVGR
                     IHKAHTGLSEVLLVTDGRFAADVMVERSRVRAIAEGVGGNFCQLKYVSPAHDVAVGDR
                     IVFSGFDGSMPKGVLLGTVVSVDRPKESLFQKVKVQCAVNFQDVEEVMVILSRPSVPF
                     RAGKD"
     gene            complement(1384..2415)
                     /locus_tag="VK429_02135"
                     /pseudo
     CDS             complement(1384..2415)
                     /locus_tag="VK429_02135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020734872.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
     gene            2601..>4023
                     /locus_tag="VK429_02140"
     CDS             2601..>4023
                     /locus_tag="VK429_02140"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HLN90642.1"
                     /translation="MLSILRRNAGSWAIKIILSFIALTFIWWGVGTYSEQGRNVAATV
                     GGETITTNELSEAVAGLEKTYREVYGPAFTPEMAKALNLKKQAMDSLVQRKIVLAEAG
                     KMGLSATDEEVQREIAAVPAFQQDGQFREERYRSVLSYNRVGIAEFEASKRVEITMKK
                     IEGLLAAGALVPETEAKELFRVASRKIRLLVVTADPGKAKADAPAEGEILAKYEQAKE
                     RFRTPARVKLAVAAFTPDHFGREVQPSEAEITAFHATNSDRFLTEEQRLVSRIVLPFG
                     TKDRDAVRKKAEEVLARASKGKADFDAQAKAHSRGKGGEAWLSRKDAGEALSGPLFQA
                     SVDTVVGPVEVPGAFVLARVNRIRFPEALPLSQVRDRVVEQIRREKGKDLAVVKAYEA
                     QPKAASAKGVKATAAAFGVPVIETGWVGAEGAPGVPAALVQDALLLPSGEVAPVKTLG
                     DTHYLFQVTAKEDSRIPPLADVRD"
BASE COUNT          737 a         1341 c         1357 g          588 t
ORIGIN      
        1 gtcctgctcc cgcttgcgga tccggccggt cattccctaa cccggcgcca gcggaccgac
       61 aggtccagga agaggggaac ggcgatcagg gaggtccagg cgatccggac ggcctcctgc
      121 gcgccccaaa ggaaggagaa gggcgacgga gaatgactcg gccgccagca gggacacgac
      181 ggcggagagc agcgacggtt cgttgcgcag atggaagcgg cgcccgatct cccgcgaggc
      241 gaagtagagg gccatcgatc cgagaaacat cgaccaggag ggcgcggacg cggtgatctc
      301 gcggaagagc gcggggggga gcgcgcacag gaatcccgcg atccccggaa cgaaaagccc
      361 cgagaaaacg atcgcgagga acgggaagtc ggggagcagg aaccagggga cgaaaccgga
      421 gagtccccag acgcagaggg aggcgcccag atacgacagg gcgagcagca cgagaaaatg
      481 cctcaatctt ttcccgcccg gaacggcacg gagggccggg agaggatcac catcacctcc
      541 tcgacgtcct ggaagttcac cgcgcactgg accttcacct tctggaagag gctctccttc
      601 gggcggtcga cgctgaccac ggtgccgagg agaaccccct tgggcatgct cccgtcgaac
      661 ccggagaaga cgatccggtc ccccacggcg acgtcgtgcg ccggggagac gtacttcagc
      721 tggcagaagt tcccgcccac cccttccgcg atggcgcgga cccggctgcg ctcgaccatc
      781 acgtcggccg cgaacctgcc gtccgtgacg agcagcacct cggaaagccc cgtgtgagcc
      841 ttgtggatcc gcccgaccgc gccgtaggga gtgaccacgg acatcccggg ttccaccccc
      901 gattccgagc cggcgccgag gaagatcgcc cggaaccagg gggagacgtc gtgcccgacc
      961 acgcgcgccc cgagggtccg ccgttcgacg gtctccgagt agcgcaggag ctccttcaac
     1021 cgccggttct cgaggacggc gtccctggtc tcgtggagcc gctcacggag ctccgtcacc
     1081 tccttccgga gccgatcgtt ctcgcgggac acgcccacca gggcgacgta ccggttccat
     1141 acgccggaaa agccgccgcg caggaagtcc gcggcggagt aaaagggacg aaagagggcg
     1201 accccggcgt cgcgcaccgg ctcgacccgc tccagggcgg gcgaagggcg gacgaagacc
     1261 tggatcgccg cgacgaggag cgccacggca acgaggagcc gccaccagtt ccggaagaag
     1321 gatcgcatag ataccgcttg gataccgggg agcgaaccta gtgcaccgtc cgcccccgat
     1381 tggtcaatgc agggccacct gccgtagcag gtcgagttcg tccagcgcct tgccggaccc
     1441 gagcacaacg caggagaggg ggtcctccgc caccgtgacg gggagccccg tctcttcccg
     1501 cagcagggcg tcgaggttgc gcagcagcgc cccgccgccg gcaagcacga ttccccggtc
     1561 gtagatgtct cccgccagct ccggcggggt ttcctcgaaa acggacttga cggcgtcgac
     1621 gatgatccgg accggttcgg acagcgcctc gcgcacctcg tccgagttca gggtgagcgc
     1681 cttgggcacc ccggagacca tgtcgagtcc cttgatctcc gtggtttccg agaatccggg
     1741 gaaagcgttc ccgatcgaca cctttatctg ttccgccgtc ggctcgccga tcagcaggtt
     1801 gtacttccgc ttcacgtact ggaggatcgc ctcgtccatc ttgtcgccgg ccacccgcac
     1861 cgactggctc ttgacgatcc ccccgaggga gatgaccgcc acctcggtcg tccctccgcc
     1921 gatgtcgacg accatgctgc cggacggttc ggtgatgggg agtcccgccc cgatcgcggc
     1981 cgccagcggc tcctagatca gatacacctc ccgggcgccc gcgctctgcg cggactcgcg
     2041 gacggcgcga cgctccacct cggtgcagcc gtaggggacg cagatgatga tgcggggccg
     2101 cacgagggtg cgggccttgt gggccttccg gatgaagtac cggagcatcg cctcggtgac
     2161 ctcgaaatcg gcgatgacgc cgtccttgat ggggcggatc gccacgatgt tccccggcgt
     2221 gcgcccgatc atccgcttcg cctcgatccc gacggcgagc accttcttgg tcccccgggt
     2281 gtcccggtgg accgccaccg ccgagggctc ggagcagatg atcccttccc ccttcacgta
     2341 caccagcgtc gtcgcggtgc cgagatcgat cgcaagatca tgtgaaaaca gcccgagcag
     2401 ccggttgaat atcatcccgc atcctccaga cgcacgttcg gtgtcaccgg aacgtatcgg
     2461 ggtatattag cagtccggcg accttcaatg caatccgaag gaaaaaccgc cggaatcccg
     2521 ttgatatcga acctcgcgtg gcattagaat ggcacgttcg gcgacacttt catttccaac
     2581 gacaggagaa catcctcgcc atgctttcca tactccgccg caatgccggc tcctgggcca
     2641 tcaagatcat cctctccttc atcgcgctga ccttcatctg gtggggagtc ggcacctatt
     2701 ccgaacaggg ccggaacgtg gcggccaccg tgggcggaga gacgatcacg acgaacgagc
     2761 tttccgaggc cgtcgccggc ctcgagaaga cgtatcgcga ggtgtacgga cccgccttca
     2821 cgccggagat ggccaaggcg ctcaacctga agaagcaggc gatggactcc ctggtccagc
     2881 ggaagatcgt gctcgcggag gccgggaaga tggggttgtc ggccacggac gaggaagtgc
     2941 agcgggagat cgccgccgtt cccgcgttcc agcaggacgg gcagttccgg gaggaacggt
     3001 accgctcggt cctctcctac aaccgtgtcg gcatcgccga gttcgaggcc tccaagcggg
     3061 tggagatcac gatgaagaag atcgaagggc tcctcgccgc cggggcgctc gttccggaaa
     3121 cggaagcgaa ggaactgttc cgggtcgctt cgcggaagat ccggctcctg gtggtcacgg
     3181 cggaccccgg aaaagcgaag gccgacgcgc cggccgaggg ggagattctc gcgaaatacg
     3241 aacaggcgaa ggaacggttc cgaactccgg cgcgggtgaa gctcgccgtc gccgccttca
     3301 ctcccgatca cttcggccgg gaggtccagc cgtcggaggc cgagatcacg gcgttccacg
     3361 cgacgaactc cgaccggttc ctcaccgagg agcagcggct cgtatcgcgc atcgtcctcc
     3421 ccttcgggac gaaggaccgg gacgcggtgc ggaagaaggc ggaggaggtc ctcgccaggg
     3481 cgtcgaaggg gaaggccgat ttcgatgccc aggcgaaggc gcattcccgc gggaaaggcg
     3541 gggaggcgtg gctttcccgc aaggatgccg gcgaggcgct ctcggggcct ctgttccagg
     3601 cctccgtgga cacggtggtc gggccggtcg aggtcccggg cgctttcgtc ctcgcccgtg
     3661 tgaaccggat ccggttcccg gaagcgcttc ccctctccca ggtccgcgac cgcgtcgtgg
     3721 agcagatccg tcgcgagaag ggaaaggacc ttgccgtggt caaggcgtac gaagcgcagc
     3781 cgaaggcggc ctccgcgaag ggcgtgaagg cgaccgcggc ggcgttcggc gtgccggtca
     3841 tcgagaccgg ctgggtgggg gcggaagggg cgcccggcgt ccccgcggcg ctggtccagg
     3901 acgcactgct gctcccctcg ggcgaggtgg cccccgtgaa gaccctgggg gatacccact
     3961 acctctttca ggtaacggca aaggaggatt cccgcatccc ccccctggcg gatgtgcgcg
     4021 aca
//
LOCUS       DATGYW010000159         3209 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_281339, whole genome shotgun sequence.
ACCESSION   DATGYW010000159 DATGYW010000000
VERSION     DATGYW010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3209
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281339"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(252..1598)
                     /gene="dnaA"
                     /locus_tag="VK429_02145"
     CDS             complement(252..1598)
                     /gene="dnaA"
                     /locus_tag="VK429_02145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020678235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HLN90643.1"
                     /translation="MTAKAWEKVLAQLRGEVSEQVFETWLRPLRFVAREGPILFVATP
                     HKFFKEWIEENHLSRIEEIARKELAEEVTVEIMVGIEEEDPLSPFPVSSRLLQLPEEI
                     ATRTRAVFGPLNTRYTFDRFVIGTGNQFAHAASVAVANEPGNSYNPLFIYGGVGLGKT
                     HLLHAIGNAALEKSPRLKVCYIPAEKFTNDLIASLRSGKMSDFKERYRNVDMLLMDDV
                     QFIAGKRSTQEEFFHTFNELYSSRRQVVVSSDKFPKEIPDLEERIQSRFEWGLVADIQ
                     APDIETRVAILNRKAEAENIVLPEDVALYLATMVKNNIRELEGCLIRIGAHASLTRRE
                     INLDLAKTILAPLLGNGGREVSPNHIQKAVADHYGVKVSELRSDRKHKVIATPRQVAM
                     FLMREMTRCSFPDIGKQFGGRDHTTVMYAVKKIEKKVADDVSLRNTLDILRKKIEG"
     gene            complement(1887..2789)
                     /locus_tag="VK429_02150"
     CDS             complement(1887..2789)
                     /locus_tag="VK429_02150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90644.1"
                     /translation="MPPRNIPRFELRRLFGLPLLSAGEGADAPAPLESELLFDLTGEN
                     PENRLFGRYGPGEIRERLDASGLLAGLSERGYPDPILRLSCADPDDQRICLYAGEETR
                     DRLLLEARLQLAPFHPRRPIGPFTEASSFRMLVIHWLVLSSPDGTFTVERPRLPGQEK
                     PGLGLLNQTIALLKAFTRELSVDGVLDVPDHFHTALFYSRAFRYLDPEAEGRFFAIVR
                     DLSGVPLALASDAIREGCLVDRATGAPVPWSAAEQVIALRGPLSRFLRSPSYREARNR
                     ALADHRFVVNWDLYRKNLALRNPP"
     gene            2906..3058
                     /gene="rpmH"
                     /locus_tag="VK429_02155"
     CDS             2906..3058
                     /gene="rpmH"
                     /locus_tag="VK429_02155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HLN90645.1"
                     /translation="MKRTYQPHNLRRKRTHGFRERMSTPGGRKVISRRRAKGRKRLSV
                     TVSGKK"
BASE COUNT          594 a          952 c         1048 g          615 t
ORIGIN      
        1 ttccgcgact ccctggattc cggtgagcac gtcgatcagc aggtctctct ccacagtaaa
       61 gttcatcgtc ttcctcttcc tgtagtaaga attgaaaaga ccgtagtcgt agcagggggt
      121 gtgcgttctg tggaaaaccc ggtcggaacg ccgcgcgccg ggaggcgggg ctgttggggg
      181 ttttgtgtga aacgcagcga tgggaagaga cggtctgtgg acagcggggc ccccttctct
      241 ttctccacag gttatccctc gattttcttc ctaaggatgt ccagcgtgtt ccttaaagat
      301 acatcgtctg cgactttctt ctcaattttt tttacggcgt acatcaccgt ggtgtgatcc
      361 cgtcccccga attgcttccc gatgtcggga aaagagcagc gcgtcatctc gcgcatcagg
      421 aacatcgcca cctggcgcgg cgtcgcgatc accttgtgct tccggtcgga acgcagttcg
      481 gagaccttca ctccgtaatg gtccgcgacc gctttctgga tgtggttggg ggaaacttcc
      541 cggcccccgt tgccgagaag gggagcgagg atcgttttcg caaggtcgag gttgatctcc
      601 ctgcgggtca gcgaggcgtg ggccccgatc cggatgaggc acccctcgag ctcgcggatg
      661 ttgtttttca ccatggtcgc caggtataac gccacgtcct ccggaaggac gatgttttcc
      721 gcttccgcct tccggttgag gatcgccacc cgcgtctcga tatcgggcgc ctggatatcg
      781 gcgaccagcc cccactcgaa tctcgactgg atccgctcct cgaggtccgg gatctccttg
      841 gggaacttgt cgctggacac cacgacttgc cggcgggagg agtacagctc gttgaaggtg
      901 tggaagaact cttcctgggt gcttcgcttt cccgcgatga actgtacgtc gtccatcagc
      961 agcatgtcga cgttgcggta tcgctccttg aagtcggaca tctttccgga gcgcagggag
     1021 gcgatgagat cgttggtgaa cttctccgcg gggatgtagc acaccttgag gcgcggggac
     1081 ttctccagcg ccgcgtttcc gatggcgtgc agcaggtgcg tcttccccag gccgacgcct
     1141 ccgtagatga agagggggtt gtagctgttt ccgggctcgt tggccaccgc gacggaggcc
     1201 gcatgtgcga actggtttcc ggtaccgatg acgaaccgat cgaacgtgta tcgggtgttc
     1261 agcggaccga acaccgcccg ggtgcgcgtg gcgatctcct cggggagctg cagcagccgg
     1321 gacgacacgg gaaacgggga aagagggtcc tcctcctcga tcccgaccat gatctcgacg
     1381 gtgacctcct ccgccagctc cttcctcgcg atctcctcga tccggcttag gtggttctcc
     1441 tcgatccact ccttgaagaa cttgtgcggc gtggcgacga agaggatcgg gccttcccgc
     1501 gcgacgaacc gcaaggggcg cagccatgtt tcgaacacct gttcgctcac ctcgccgcgc
     1561 aactgggcga ggactttttc ccaagctttc gcggtcacgc gtggggctcc ggacgaaggc
     1621 ggttcatgga cgggaacatg gcgaaaaagc gttcattttc cggccggaac gcggggagaa
     1681 ggcggaatag ttgccaacat gtttttccac aggtgtggat aaccagtatt cccttttcat
     1741 tccaagcatt tagagcgaat tttccgtgag tttctcactg gtatttcctg gatctggtcg
     1801 gatgcgtttc cgcctcccgg cgacgtgaag gatgcggatg agggatggag ggtaccacac
     1861 gcgaaaaacg ggacgcaagg agatttttac ggagggttcc ggagggcgag gttcttcctg
     1921 taaagatccc agttgacaac gaaccgatga tctgccaatg cccgatttct ggcctcccgg
     1981 tacgaggggg agcggaggaa acgggacagc ggcccgcgca acgcgatcac ctgttcagca
     2041 gcggaccagg ggaccggtgc tcccgttgcc cggtcgacga ggcacccttc acggatcgca
     2101 tcggaggcca gcgccagcgg gacgccggat aggtcgcgca cgatcgcaaa gaaccgccct
     2161 tccgcctccg ggtcgaggta gcgaaaggcg cgggagtaga aaagcgccgt gtgaaaatgg
     2221 tccgggacat cgagcacgcc gtcgacggac agctcgcggg tgaacgcctt gagcagcgcg
     2281 atcgtctgat tcagcaggcc cagcccgggc ttttcctgcc ctggaaggcg cggccgctcg
     2341 acggtgaacg tcccgtcggg ggaagagagg acgagccagt ggatcacgag catccggaag
     2401 gaggacgctt ccgtgaacgg gccgatggga cggcgcggat ggaacggagc cagttgcaga
     2461 cgcgcctcga ggaggaggcg gtcccgggtc tcctccccgg cgtagaggca gatccgctga
     2521 tcgtcggggt cggcgcacga gaggcgtagg atcgggtccg ggtacccacg ctccgagagg
     2581 ccggccagca gtcccgaggc gtcgagacgc tcccggatct ccccggggcc gtaccgcccg
     2641 aagagccggt tctcggggtt ctcccccgtc aggtcgaaga ggagctcgct ttccagcggg
     2701 gccggcgcgt ccgcgccctc ccccgccgac aggaggggca aaccgaacag cctgcgaagt
     2761 tcgaacctcg gaatattcct cggaggcatg gtctccccgg gcatggagta ccggaaaacc
     2821 ggttgacacg gtgatccgta aggcaataga ttatatggtt cccgtcattt gagcgagtcg
     2881 tgttgatgga aggagcgaga gtcccatgaa gcgcacgtac cagccgcaca acctgcggcg
     2941 gaaaagaacc cacggcttcc gcgagcggat gtcgacccct ggcggccgga aagtcatttc
     3001 acgtcggcgc gccaaggggc gcaagcgtct ctccgtaacg gtcagcggca agaagtgacc
     3061 gttccccccc gggaacgtcc gcggagcttc cccgcgagcg aacgcctgcg caccgaccgg
     3121 gaattccggg aggtggtgcg gaagggcgcg cgcgtgcaca cgacgcatta tacggtgtac
     3181 cgcgactccc tgggtggggg gaaacgcca
//
LOCUS       DATGYW010000160         1563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_7279, whole genome shotgun sequence.
ACCESSION   DATGYW010000160 DATGYW010000000
VERSION     DATGYW010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7279"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1489
                     /gene="ftsH"
                     /locus_tag="VK429_02160"
     CDS             <1..1489
                     /gene="ftsH"
                     /locus_tag="VK429_02160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015720820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HLN90646.1"
                     /translation="WIFFMRQMQAGGGKAMSFGKSRAKLLTETTNKVTFADVAGIEEA
                     KEELQEIIAFLKDPKRFTKLGGRIPKGVLLVGAPGTGKTLLARAIAGEAGVPFFSISG
                     SDFVEMFVGVGAARVRDLFIQGKKSAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLN
                     QLLVEMDGFESNEGLILIAATNRPDVLDPALMRPGRFDRQVVVPKPDVKGREQILGVH
                     TRKIPLDPDVKLDVLAKGTPGFTGADLANLANEAAIHAAGINLATVTMDCFEMAKDKV
                     MMGRERRSMIISDVEKKSTAYHEAGHAIVATLTPGADPIHKVSIIPRGMALGITQQLP
                     IDERHTYSQVYLKNNITILMGGRVAEELVHGELTTGAGNDIERATALARKMVCEWGMS
                     EKLGPVTFGQKQESIFLGRDITRHQDYSEATSRDIDQEVRGIVLAAYERAKTLLQTNL
                     DVLHRVAKTLLEKEVVDGAEILRIIQGGNSPEGPVDAPAPAGTTA"
BASE COUNT          302 a          486 c          560 g          215 t
ORIGIN      
        1 gtggatcttc ttcatgcgcc agatgcaggc ggggggcggc aaggcgatgt cgttcggcaa
       61 gagccgggcg aagctgctga ccgagacgac gaacaaggtc accttcgcgg acgtggcggg
      121 gatcgaggag gccaaggagg agctgcagga gatcatcgcg tttctcaagg acccgaagcg
      181 gttcacgaag ctcggcggcc gcattcccaa gggggtgcta ctcgtcggcg cgccggggac
      241 cgggaaaacg ctcctcgcgc gggcgatcgc gggggaggcg ggcgtccctt tcttctcgat
      301 cagcggctcc gacttcgtcg agatgttcgt cggcgtcggc gcggcgcggg tgcgggacct
      361 cttcatccag gggaagaaat cggccccctg catcatcttc atcgacgaga tcgacgcggt
      421 cgggcggcat cgcggcgcgg gccttggcgg cggccacgac gaacgggaac agacgctcaa
      481 ccagctcctg gtcgagatgg acgggttcga gtcgaacgag gggctgatcc tcatcgcggc
      541 gacgaaccgg ccagacgtcc tcgatccggc gctgatgcgg cccgggcggt tcgaccgcca
      601 ggtggtggtt cccaagccgg acgtgaaggg gcgggagcag atcctcggcg tgcacacgcg
      661 gaagatcccg ctcgacccgg acgtgaagct cgacgtgctg gccaagggga cgccggggtt
      721 caccggcgcc gatcttgcga acctggccaa cgaggcggcg atccacgcgg ccgggatcaa
      781 cctcgccacg gtcacgatgg actgcttcga gatggccaag gacaaggtga tgatggggcg
      841 cgagcggcga tcaatgatca tcagcgacgt ggagaagaaa tcgaccgcct accacgaggc
      901 ggggcacgcg atcgtcgcca cgctcacccc gggggcggac ccgatccaca aggtcagcat
      961 catcccccgg gggatggcgc tcggcatcac ccagcagctc ccgatcgacg agcggcacac
     1021 ctactcgcag gtgtacctga agaacaacat cacgatcctg atgggcggac gggtggccga
     1081 ggagctggtc cacggagagc tgaccacggg cgcggggaac gacatcgaac gggcgacggc
     1141 gctcgcccgg aagatggtct gcgaatgggg gatgagcgaa aagctggggc cggtgacgtt
     1201 cggccagaaa caggaatcga tctttctcgg acgcgacatc acccggcacc aggattacag
     1261 cgaggcgacc tcgcgcgaca tcgaccagga ggtccgggga atcgtcctcg ccgcctacga
     1321 gcgcgcgaaa acgctgctcc agacgaacct cgacgttctg caccgggtcg cgaagacgct
     1381 gctcgaaaag gaagtggtcg acggggccga gatccttcgg atcatccagg gggggaattc
     1441 gccggagggt ccagtggacg cgcccgcgcc ggccggaacg acggcctgag agggtcagcc
     1501 cgtcatcccg ccgcatccca cgaaaccgtt ccgagttccg atccccgggg gggtcctcga
     1561 cct
//
LOCUS       DATGYW010000161         1514 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_281476, whole genome shotgun sequence.
ACCESSION   DATGYW010000161 DATGYW010000000
VERSION     DATGYW010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281476"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VK429_02165"
     CDS             <1..180
                     /locus_tag="VK429_02165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90647.1"
                     /translation="GITAEGKIRPAPQARPDPFSGKQKQISQSVRGKPVSGHPLKKEE
                     LVGSRPKFIADLHKV"
     gene            195..398
                     /locus_tag="VK429_02170"
     CDS             195..398
                     /locus_tag="VK429_02170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90648.1"
                     /translation="MAEAQRKMETDFKCCDYFQPALDPNILRAYAGYCKARAWPFTVM
                     VPIGGFENECPKPPTRKKEGGKG"
     gene            401..733
                     /locus_tag="VK429_02175"
     CDS             401..733
                     /locus_tag="VK429_02175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90649.1"
                     /translation="MANLREEFEGRYGPLWSGASSLSIDGVTHELHDVIHRIGFGFEG
                     IKIIDAPPVEAGRYAIRFFDGEVRCIVCLEFGADLILLEEHRVHIAEWLGEAYFETEF
                     QVNCPMDF"
     gene            746..1168
                     /locus_tag="VK429_02180"
     CDS             746..1168
                     /locus_tag="VK429_02180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90650.1"
                     /translation="MKVKFYYSSKDKPGEQYPCNNAAALEKIKALKARGADVEAIDVA
                     NVEDVFRFYHSALTGPPATVRAVFGMKGGLEADFGRATPALLVFGDPKDRYPTDAYPR
                     QDQARGGLVGCEKALDDLSKELAKLPTTEDEEDQPVAR"
     gene            1165..>1514
                     /locus_tag="VK429_02185"
     CDS             1165..>1514
                     /locus_tag="VK429_02185"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLN90651.1"
                     /translation="MSIIPREYLPPKEFQPERIYKLKEFESYPDPLNSTEELLDKQVA
                     AGGGDRRAVLIADKVLTYKQLLGASNKMGNALKKLGVEEADRVMLRSPNVPPALFTNF
                     GALKIGAVMVPTSP"
BASE COUNT          321 a          453 c          491 g          249 t
ORIGIN      
        1 ggcatcaccg ccgaaggaaa gatccgcccg gctccgcagg cgcggcccga tccgttcagc
       61 ggaaagcaga agcagatttc gcaaagcgtc cgcggtaagc ccgtgagcgg ccatccgctc
      121 aagaaggagg aactggtcgg aagccgaccc aagttcatcg cggacctgca caaggtctga
      181 caggagaaca agatatggcg gaagcacaga ggaagatgga gacggatttc aagtgctgcg
      241 actatttcca gccggcgctc gacccgaaca tcctgagggc ctacgcaggc tactgcaaag
      301 cgcgcgcgtg gcctttcacc gtgatggttc cgatcggcgg cttcgagaac gagtgcccga
      361 agcctccgac ccggaagaaa gaaggcggca agggataggc gtggccaatc tccgggagga
      421 gttcgagggg cgttacggac ctctctggtc cggggcgtcg tctctctcga tcgatggtgt
      481 cacccatgag cttcacgacg tgatccatcg gatcggcttc ggcttcgagg gaatcaagat
      541 catcgacgca ccccccgtcg aagcgggtcg ctacgcgatt cgtttcttcg acggggaggt
      601 gcggtgcatc gtctgcctgg agttcggagc ggacctcatc ctcctggagg agcatcgcgt
      661 ccacatcgcc gagtggctcg gggaggccta cttcgagacg gagttccagg tgaattgccc
      721 catggatttt tgaacaggag aagccatgaa ggtcaagttc tactattcaa gcaaagacaa
      781 gccgggtgag cagtacccgt gcaacaacgc ggccgctctc gagaaaatca aggccttgaa
      841 ggcccgggga gccgacgtcg aagcgatcga tgtggcgaat gtcgaggacg tgttccggtt
      901 ctaccactcc gccctgacgg gtcctcccgc gacggtgcgc gcggtcttcg gcatgaaggg
      961 cggactcgaa gcggacttcg gccgtgcgac ccccgccctg ctcgtcttcg gtgatccgaa
     1021 ggaccgctac ccgaccgacg cctacccgcg ccaggaccag gcccggggag gactcgtcgg
     1081 gtgcgagaag gctctcgatg acctgagcaa ggagctcgcc aaactgccaa cgaccgagga
     1141 cgaagaagat caaccggtgg cgcggtgagc ataatcccgc gggagtatct gcccccgaag
     1201 gagtttcagc ctgagcggat ctacaagctg aaggagttcg agagctaccc ggatccgttg
     1261 aacagcaccg aggagctcct cgacaagcag gttgcggcgg gcggaggcga tcggcgcgcg
     1321 gtcctgatcg cggacaaggt cctcacgtac aagcagctgc tgggcgcatc caacaagatg
     1381 ggcaacgctc tcaagaagct cggcgtcgag gaagcggacc gggtcatgct tcgatcgccc
     1441 aacgtcccgc cggccctgtt cacgaacttc ggtgctctga agatcggcgc cgtgatggtt
     1501 ccgacctcgc ccat
//
LOCUS       DATGYW010000162         1836 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_281626, whole genome shotgun sequence.
ACCESSION   DATGYW010000162 DATGYW010000000
VERSION     DATGYW010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281626"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..668)
                     /locus_tag="VK429_02190"
     CDS             complement(<1..668)
                     /locus_tag="VK429_02190"
                     /inference="COORDINATES: protein motif:HMM:NF039822.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5666 domain-containing protein"
                     /protein_id="HLN90652.1"
                     /translation="MLLATLSLSCGSTDFAGGGTGGTGISTGAVSGYGSVVVNNVHFR
                     TDDEVAPGFHTKKMSNGADKSGRMDNVVFAVGMVVTVRHGKDDNNAQVIEYRDNLSGP
                     IAAKASGVDNVIVILGHTIVVENAAFFDSLKVNDVVEVSGFVDNSVRIRADFVSPASR
                     PANGFEVKGFVISALSGNSFQLGPLPGDSGATVAVSYSSAAISGLSGGPEKGMYVQVS
                     TGDRA"
     gene            complement(713..1783)
                     /locus_tag="VK429_02195"
     CDS             complement(713..1783)
                     /locus_tag="VK429_02195"
                     /inference="COORDINATES: protein motif:HMM:NF039473.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6502 family protein"
                     /protein_id="HLN90653.1"
                     /translation="MGPSFPPISMGISWGGSAKVNRFVSTKPTDPCGRCVFMGAMIPK
                     IPSKTRIGMGGNRKWKLKWKKLIWKLTGGDIWDNIPNMETRIVKAISAAVTTLLRPLV
                     RILLRNGIPYRAFSDIAKRVYVDVATEEFDIPGKKQSKSRVSILTGLSRKEVLRVRRL
                     PASDDLGATERYNRAARVIAGWVRDRRFCSGSGNPAELRFEEGSSSFRNLVKTYSGDA
                     PTRAVLDELLRVGAVERTPGGKIRLLERSYIPKTGEIDKIGILGVDASDLIATIDHNI
                     RQPDTPFFQRKVSYDNLPLEALPELKRKAADRGQALLESMDRWMSARDRDVTPGVPGT
                     GRKRAGIGIYYFQEDYDEGGKT"
BASE COUNT          348 a          587 c          521 g          380 t
ORIGIN      
        1 gccctgtccc cggttgagac ctgcacgtac attccttttt caggtccccc gctaaggccg
       61 gatatcgccg ccgagctgta ggaaaccgcc acggtcgccc ccgaatcgcc cggcagtggt
      121 cctagctgga aggaatttcc ggaaagcgcg gagatgacga atcccttcac ctcgaacccg
      181 ttggcggggc gggacgcggg ggaaacgaag tccgcccgga tgcggacgga gttatccacg
      241 aacccgctga cttccacgac gtcgttaact ttaagggagt cgaagaacgc cgcgttctcc
      301 acaacgatgg tgtgaccgag gataacgatg acgttgtcca cgccggacgc ctttgccgcg
      361 atgggccctg agaggttgtc ccggtactcg atcacctgcg cgttgttgtc gtccttccca
      421 tgccgaaccg tcacgaccat ccccactgcg aagacgacat tgtccatccg gccggacttg
      481 tctgccccat tggacatctt tttcgtatgg aatccgggag ccacttcgtc gtccgtgcgg
      541 aaatgcacgt tgttcaccac gacgcttccg tacccggaga cggcgcctgt gctgatcccc
      601 gtgccccctg ttccgccgcc tgcgaaatcg gtgctcccgc aagagaggga gagggtcgcc
      661 agcaacaaca aaagtatccg gatccggagt cgtcggattc gacccgcggg tatcatgtct
      721 ttcccccctc gtcgtaatcc tcctggaaat agtagatgcc gatcccggcc ctttttctcc
      781 ctgtcccggg aacgccgggg gtgacgtccc ggtcccgggc gctcatccac cggtccatcg
      841 attccagcaa ggcttgccct cgatccgccg ccttcctttt caattcgggg agcgcctcca
      901 ggggaagatt gtcgtaactg accttcctct ggaaaaacgg cgtgtctggt tgacggatat
      961 tgtggtcgat ggtcgcgatc aggtccgacg catcgacgcc gagaatgccg atcttgtcga
     1021 tttccccggt cttcgggatg tacgaccgct cgagcaaccg gatcttccct cctggagtcc
     1081 gctcgacggc cccgactcgc agcaattcgt cgagcaccgc ccgggtgggg gcatccccgc
     1141 tgtaggtctt gacgaggttc cggaaggagg aagacccctc ctcgaatcga agttccgccg
     1201 gatttcccga accgctgcag aaccggcggt cacggaccca gccggcgatc acgcgagcgg
     1261 cccgattgta ccgctcggtg gcgcccaggt cgtcactggc agggaggcgc ctgacgcgca
     1321 gcacctcttt ccgggagagg ccggtgagaa tggagacgcg ggatttcgac tgtttctttc
     1381 cagggatatc gaattcctcc gtggccacgt ccacatagac tcgcttcgcg atatcggaaa
     1441 acgcccggta ggggatgccg ttcctcagaa ggatccgtac cagcgggcgg agcaaggtcg
     1501 tgactgccgc tgaaatggcc tttacaatcc gtgtttccat attgggaata ttatcccaaa
     1561 tatctcctcc agtcaacttc catatcaatt tcttccattt caatttccat tttcgattgc
     1621 cacccatccc gatgcgcgtt ttcgaaggga tctttggtat catggccccc atgaaaacgc
     1681 atctgccgca cggatccgtc ggtttcgtcg acacgaagcg gttcaccttc gccgagccgc
     1741 cccacgagat gcccatggat atcgggggaa agctcgggcc catcacgctc gcctacgaga
     1801 cgtacgggaa gctgaaccgg gagaagagca acgccg
//
LOCUS       DATGYW010000163         1804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_69038, whole genome shotgun sequence.
ACCESSION   DATGYW010000163 DATGYW010000000
VERSION     DATGYW010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69038"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..414)
                     /locus_tag="VK429_02200"
     CDS             complement(40..414)
                     /locus_tag="VK429_02200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90654.1"
                     /translation="MLPWNPEVGEILTAIISLACRGGEQFRVPRIYSVLSELKGRDVL
                     LSGLYFSITGAVCYSRQIEETLRSLMAKGVLVPTERDTVIVRDEAAKEIRARLRYTLP
                     SSIFRSLQDTSQRFYRKMFRTR"
     gene            complement(659..>1804)
                     /locus_tag="VK429_02205"
     CDS             complement(659..>1804)
                     /locus_tag="VK429_02205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009943125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA hydrolase/transferase C-terminal
                     domain-containing protein"
                     /protein_id="HLN90655.1"
                     /translation="RCGFFGDLDTAIIEVTGITKDGKLIPSTSVGNNQVFIDCAREVI
                     LEVNYYHPLELEGMHDVYEPALPPNVQPIMILKPSDRIGSPYLTCPPEKIKAIVETNH
                     PDRTTVFKEPDKDSKAISGHILDFFKFEVKKGRLPKNLLPLQSGVGNVANAVLYGLLD
                     SDFEDMTVYTEVIQDGMLALIDAGKITFASSTAFSVSPAMVEKFKENINTYKDKILLR
                     AQSISNHVGVIKRLGVLAMNGCVEFDLYGNVNSTHINGTRIINGIGGSGDFARNSFIS
                     IFTTSSVAARGDISCVVPMVSHVDHCEHDVDVVVTEQGLADLRGTSPKQRAVQIIDKC
                     VHPDYRPALKDYYFRALNHSPGKHTPHLIEEAFSWHTRFMRTGSMKV"
BASE COUNT          367 a          511 c          533 g          393 t
ORIGIN      
        1 ccccgaaaga ggcggttgtt tgcagagggg atgcggtccc taccgggtcc tgaacatctt
       61 cctatagaac cgctgcgagg tgtcctggag cgaacggaag atggacgacg ggagcgtata
      121 ccggagccgg gcccggatct ctttcgccgc ttcgtcacgg acgatcacgg tgtcccgctc
      181 tgttggaacg agtacccctt tcgccatcag cgagcgcagc gtctcctcga tctgccggga
      241 gtagcacacc gccccggtga tggagaagta gagacctgaa aggagcacgt ctctcccctt
      301 cagctcgctg agcacggaat atatccttgg gactcggaac tgttcgcccc cgcggcacgc
      361 aaggctgatg attgccgtga ggatctcccc gacttccgga ttccatggca acatcgggag
      421 cctccttttc ctggcgaacg aggggtaagg caattggaca agcaaaataa atgccttacg
      481 gctgccatga tattgatccg aacgggtggg acttttatcg aaccaatcaa tgatgcggaa
      541 aggcgaaatt acagaatgga atacgaccgg gaaaaaatcg tattccgccc tttatgacct
      601 gcccccctga gccttcccta tctgtactct tataaaactt ccatttgcgc cgttccctct
      661 acactttcat cgatcccgtg cgcatgaacc gggtgtgcca ggaaaatgcc tcttcgatca
      721 ggtgcggcgt gtgtttcccc ggggaatggt tgagagcccg gaagtaataa tccttgagcg
      781 ccggccggta atccgggtgg acgcatttgt cgatgatctg gaccgcacgc tgtttcgggg
      841 aagtcccccg gaggtcggcc agtccctgtt cggtgacgac cacgtccacg tcgtgctcgc
      901 agtgatcgac gtgggacacc atcgggacca cgcaggagat gtctccccgg gcggccacgg
      961 aggacgtggt aaagatcgag atgaacgagt tccgtgcgaa gtcgccggaa cccccgatcc
     1021 cgttgatgat ccgcgtgccg ttgatatggg ttgaattgac gttgccgtag aggtcgaact
     1081 ccacgcaccc gttcatcgca aggacgccca gccgcttgat gaccccgacg tgattgctga
     1141 tcgactgggc gcgcaggagg atcttgtcct tgtacgtgtt gatgttctcc ttgaattttt
     1201 cgaccatcgc cggggatacg gaaaatgccg tcgaggacgc aaaggtgatc ttccctgcgt
     1261 cgatgagcgc cagcatccca tcctggatca cctcggtgta cacggtcata tcctcgaaat
     1321 ccgaatccag cagcccgtac agcacggcgt tggcgacgtt ccctacgccg gactggaggg
     1381 gaaggaggtt cttcggcaac cggcctttct tcacctcgaa cttgaagaaa tcgaggatgt
     1441 gaccggaaat cgccttgctg tccttgtccg gctccttgaa aaccgtagtc cggtccgggt
     1501 ggttcgtctc tacgatcgcc ttgatcttct ccgggggaca cgtgaggtag ggggatccga
     1561 tccgatcgga gggcttgagg atcatgatcg gttggacatt cggcggcaag gcgggttcat
     1621 agacgtcgtg catcccttcc agttccagcg ggtggtagta gttgacctcg aggatcactt
     1681 cccgggcgca gtcgatgaaa acctggttgt tcccaaccga cgtagagggg ataagcttgc
     1741 cgtccttggt gatgccggtc acctcgatga tcgcggtatc gaggtctcca aagaatccgc
     1801 accg
//
LOCUS       DATGYW010000164         1899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_7729, whole genome shotgun sequence.
ACCESSION   DATGYW010000164 DATGYW010000000
VERSION     DATGYW010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7729"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            510..1277
                     /gene="hisF"
                     /locus_tag="VK429_02210"
     CDS             510..1277
                     /gene="hisF"
                     /locus_tag="VK429_02210"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014254966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HLN90656.1"
                     /translation="MEPVKIMPCLDMKEGRVVKGVNFVNLRDAGDPVKNAEFYQAEGA
                     DELAMLDIAATLENRKTRLEWVKSVSAVIDIPLTVGGGIASLQDIEMTLKAGAKKVSM
                     NSAAVKDPELVTRAAGGFGKETVCVAIDGRRNPSLPSGFEVVVAGGTKGTGLDCGEWA
                     RRCQELGAGVILPTSMDGDGTLAGYDLAFTRQITDTVDLPVIASGGAGTLEHFYQAVT
                     EGGADILLAASVFHFRTLSIGQVKKYLKGRGIPVLGV"
     gene            complement(1533..>1899)
                     /locus_tag="VK429_02215"
     CDS             complement(1533..>1899)
                     /locus_tag="VK429_02215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90657.1"
                     /translation="RPTGWRILGFGKHPEIAAAVQEKLRSLGFQATNFVLTNDEAGDA
                     RLVAELKRAEYDGVAIGGYINGQDAVNFPATEETTVWFNRVLNIIHANAPGSKIILVR
                     GPGDVVPAIERVLGKNPPS"
BASE COUNT          352 a          567 c          610 g          370 t
ORIGIN      
        1 gggggcaccc cgccgatttg cgcggcgggt gtccccccgg gcgcgggcct cgtctacttc
       61 catctccttc tcaagggact ctctgaagcg ggtcggttcc ctgacgttgg gccggccggt
      121 cgggtttcgt cggttcccga aagatgggga taactttcga aacaggagtc gctttttcaa
      181 ttcgcatacg gcacccccca ttcgcaggtt gaatcgagga aagggacgga cgtccgtgta
      241 taattctgcc gttatttgtg catgtgctcc gctgatgctt ccggtttcat gcgcacatca
      301 tgcgttccct cttccgcttc gtgcgcgacc ggcgtgccct gtccatctgc ttatgtcgtc
      361 ctctttctcg gtgacccaaa cccttccgga ccccgaaaac agcacttgtc tgcactgggt
      421 ttgcagtccg ttcggttttc ttccccgaca gaggtagaat gccgaccaag gcaccatctc
      481 gatcgggaga aaacccaagg ggggatagca tggaacctgt gaagatcatg ccctgcctcg
      541 acatgaagga gggacgggtc gtcaaaggcg tcaatttcgt caacctgcgc gacgccgggg
      601 acccggtaaa gaacgcggag ttctaccagg cggagggagc ggacgaactg gccatgctgg
      661 acatcgccgc cacgttggag aaccgaaaaa cgcgtctgga atgggtcaag tcggtctccg
      721 cagtgatcga catccccctc acggtgggag gggggatcgc cagcctgcag gacatcgaga
      781 tgaccctgaa ggcgggcgcg aaaaaggttt cgatgaacag cgcagcggtg aaagacccgg
      841 agcttgtgac gcgggccgcc ggaggtttcg ggaaggaaac cgtttgcgtt gccatcgacg
      901 ggcgccggaa cccctccctt ccgtccgggt tcgaggtggt ggtggccggc gggaccaagg
      961 ggacggggct ggattgcggg gaatgggcac gccgttgcca agaactgggg gcgggggtga
     1021 tactgcccac aagcatggac ggggacggta cgttggcggg atacgacctc gccttcaccc
     1081 gccagataac cgacaccgtg gacctgccgg tgatcgcttc cggcggggcg ggaactctgg
     1141 agcacttcta ccaggcggtg acggaaggtg gcgccgacat cctcctggcc gcctcggtgt
     1201 tccacttccg gacactctcc atcggccaag ttaagaagta cctgaaggga agagggattc
     1261 ccgtactggg ggtgtaaggg gggcagatct cccgccgacc cgctgataca gaagtcctgc
     1321 catgacgtag agggccgccc caatcccgat ggcccatcag aagcggagcg acagggcgcc
     1381 gttcgctgcg tgcagttgtt tgcacggggt gtggggtccg tgcggattcc ctatgggact
     1441 gaaaagggcc tccagattac tcaagaggcc tttctgttct catcatggtg cgaagggggg
     1501 actcgaaccc cactggtttc cctgcctccc cctcaagatg gcgggttctt accgagcacc
     1561 cgttcgatcg ccggcacaac gtcccccgga ccgcgcacaa ggatgatctt cgatcccggc
     1621 gcattcgcgt ggatgatgtt gagaacgcga ttaaaccaga ccgtggtctc ttcggtcgca
     1681 gggaaattca cggcatcctg tccgttgatg tagccgccga tggccacgcc atcgtactca
     1741 gctcgcttca gctccgcgac caaccgcgcg tccccggctt cgtcgttagt gagcacgaag
     1801 ttggtcgcct ggaacccgag cgagcggagt ttctcctgga cggcggccgc gatctccgga
     1861 tgtttgccga acccgaggat gcgccaaccc gtggggcgt
//
LOCUS       DATGYW010000165         1841 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_228300, whole genome shotgun sequence.
ACCESSION   DATGYW010000165 DATGYW010000000
VERSION     DATGYW010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1841
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228300"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(123..1454)
                     /locus_tag="VK429_02220"
     CDS             complement(123..1454)
                     /locus_tag="VK429_02220"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing diguanylate cyclase"
                     /protein_id="HLN90658.1"
                     /translation="MTLMESYPFMIAKATLLFLAVFLMIEYVIRRREVGRQLEQNRRR
                     EQTLAKYSAELDALNRKLARKSEIADQFPRITKKMTEKFPSDTYPAIAIRSAKDFFHA
                     GEVGYFAPAEDSSDYTLVVGAGFPQDWVGTVRIHADEGILGMALQKKMVVSRTDRQSS
                     FGRRSSRTSLEDLGVLPDFVAPIIGISGIVGALVVAGCPVALEEERINMVMLADLLSM
                     ALQNATHMDPSRDGKWVDQLTGVSNRIYFLQRFEREIRRTANYRQNLGLFMFDIDDFK
                     RVNDTHGHHAGDVVIKRMAEIVRKNTRGDDLVGRYGGDEFMVLITSSTEEQAISFAGQ
                     LREKISTTDIAIPGTEVPVRITISGGLAMFPTHGQTTTELFRSADATLYESKRLGRNR
                     ILVATSAGLDGGIAKGTGSDQEPPTPTGIPADTGSDAVAFPLGELGEDLNP"
     gene            1649..>1841
                     /locus_tag="VK429_02225"
     CDS             1649..>1841
                     /locus_tag="VK429_02225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90659.1"
                     /translation="MRTVLPTVLRVILLAFLAVSSSAILYATVMNERTVESLADRSLE
                     STALALSTATESALRAGGGR"
BASE COUNT          339 a          571 c          547 g          384 t
ORIGIN      
        1 cccgtccgga cgacctggtg gggtatctga aagcgaagat gtacgatccg gtctatgcgg
       61 agtacgtccc aaggtcgtag cgcgtttccc gcgccgtacc gggcacgggg gcccggggaa
      121 tatcaggggt tcagatcttc accgagttcc ccgaggggga atgcgacggc atccgacccg
      181 gtgtctgcgg gaatgccggt tggcgtcggt ggttcctggt ccgacccggt acctttcgcg
      241 atcccgccgt ccagcccggc ggatgtcgcg accaggatcc ggtttcttcc cagacgcttc
      301 gattcataca gcgttgcgtc cgcagatcgg aacagctcgg tggtcgtctg accgtgggtg
      361 gggaacatcg cgagtccacc gctgatggtg atccgaaccg ggacctcggt cccgggaatc
      421 gcgatatcgg tcgtggaaat cttctcccgc agctgtccag cgaaagatat cgcctgctcc
      481 tcggtcgacg acgtgatgag caccatgaac tcgtcgccgc cgtagcgtcc cacgagatcg
      541 tccccccggg tgttcttccg gacgatttcg gccatcctct tgatgacgac gtcgcctgca
      601 tgatgaccgt gcgtgtcgtt gaccctcttg aaatcgtcga tgtcgaacat gaagagcccc
      661 aggttctgcc ggtaattcgc cgtacgccgg atctcgcgct cgaaccgctg gaggaaataa
      721 atccggttgg acacaccggt gagttggtcc acccactttc catcacggct cggatccatg
      781 tgtgtggcgt tctggagcgc cattgagagg agatccgcca gcatcaccat gttgatccgt
      841 tcctcctcca gcgcgacggg acaacccgcg accacgaggg ccccgacaat gccggagatc
      901 ccgattatcg gcgcgacgaa atcgggaagc acgcccagat cctcgagaga ggtacgggaa
      961 gatctccggc cgaaagaaga ttgccggtct gttctcgaaa cgaccatctt cttctggagc
     1021 gccataccca ggatcccctc gtcggcatgg atccgtaccg ttcccaccca atcctgcggg
     1081 aaccctgctc cgacaacgag ggtgtagtcg gaggaatcct ccgccggagc gaagtatccg
     1141 acttcaccgg catggaagaa atcctttgcg gaacgaatcg cgatggcggg gtatgtgtcc
     1201 gaagggaatt tctccgtcat cttcttggtg atccgtggaa actggtctgc gatctcgctc
     1261 tttcgggcga gcttccggtt cagggcatcc aactccgcgg aatacttcgc aagagtctgt
     1321 tctctccggc ggttttgctc caattgcctg cctacctccc gcctgcggat cacgtattcg
     1381 atcatcagaa agacggcgag gaagagcagt gtcgccttgg cgatcatgaa agggtaggat
     1441 tccataaggg tcattatcgg taatcctccc gttcgtattt agaggaaaat tcgccagcgc
     1501 atcgcttccc gctcaagtga atttcagctc ctgaacgatt cgccgccccg caaggtcgtt
     1561 actttgcggg agtggtgcta atattaacgg caatggatgt atcgcgcccc cgccccccgg
     1621 cgggagcggg gggagaaggt cccggcatat gcgcactgtt cttcccacgg tccttcgggt
     1681 catcctgctc gcgtttctcg cggtgtcctc ctccgcgatc ctctatgcga cggtgatgaa
     1741 cgagcgcacc gtggaatccc tcgccgaccg gtcgctggag agcaccgccc tcgccctctc
     1801 caccgcgacc gagagcgccc tgcgcgccgg tgggggcagg a
//
LOCUS       DATGYW010000166         1840 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_281876, whole genome shotgun sequence.
ACCESSION   DATGYW010000166 DATGYW010000000
VERSION     DATGYW010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1840
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281876"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..839
                     /locus_tag="VK429_02230"
     CDS             135..839
                     /locus_tag="VK429_02230"
                     /inference="COORDINATES: protein motif:HMM:TIGR00530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HLN90660.1"
                     /translation="MTVRTVFQMAVVGLVTLLIGLPAIALGLLVPGQSRKGKIFRWVT
                     KSYSMILLPVFGVTVETRGVSRVDRNAPYVFMSNHASHVDSLALAVSIPHPLHWVFKK
                     ELSKIPVFGWVLLSLGQIMVDRRNAMQSRIALANAASALKGNNSVLIYVEGTRSKDGK
                     LQPLKKGGFHIALHSGLPIVPVRVSGSHEIIPSGSLRVRPGHVVVELFDPIPTEGKTE
                     ADVPELMARVRDALLS"
     gene            complement(805..>1840)
                     /locus_tag="VK429_02235"
     CDS             complement(805..>1840)
                     /locus_tag="VK429_02235"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLN90661.1"
                     /translation="GVLMATGALVSVVPKPGLGMVVGRGARRAFLSLGAFLAGASTVP
                     WLFVTAPGTHLFAIRVAQGASFSVFTAASYAYIAASAPPARRAEALGIFGLSFFLPVS
                     VGGWIGEWVIGRAGFQGLFAAGIGIAFLAALFPLGMGEPSARERPSLASLKLFLSRPF
                     LVPNTAGYLFGVAYGSIFTFLPVYLVVRGSESIGAFVFVYALSVIGTRTLGRKMLDRL
                     PREWVSLCALVLMGAGNLLIPAVPGEVGIVLVGAAAGAGHGLLFPALSALVLDRVGEG
                     SCAMAMAMFTAAFDMGLVTGAAAFGFVAERFGYEAMFITAAAVVGGGTAAFFVLDPAF
                     RRAARPERAP"
BASE COUNT          340 a          654 c          620 g          226 t
ORIGIN      
        1 aagaaggcgc accccgctcc cgtacgaaat acgctccccc gggtaccccg cagcgtacga
       61 cttgaggggc acgcaacggg agggtccggc ggaatcgccg aggcggcgca gccgaaggga
      121 aaggggcgaa tcgcgtgacg gttcgcacgg ttttccagat ggcggtcgtc ggcctggtca
      181 ccctgctgat cgggctgccg gcgatcgcgc tgggcctcct tgtccccggc caaagccgca
      241 aggggaagat cttccgctgg gtgacgaaga gctactccat gattctcctg cccgtcttcg
      301 gcgtcaccgt cgagacgcgc ggcgtctccc gcgtggaccg gaacgccccg tacgtcttca
      361 tgtcgaacca cgcgagccac gtcgactccc tcgccctcgc ggtatcgatc ccgcacccgc
      421 tccactgggt cttcaagaag gagctctcga agatcccggt cttcggatgg gtgctcctgt
      481 ccctcgggca gatcatggtg gaccggcgca acgcgatgca gtccagaatc gcgcttgcga
      541 acgcggcgtc ggcgctcaag gggaacaact ccgtcctcat ctatgtggaa gggacgcgca
      601 gcaaggacgg gaagctgcag ccgctcaaga aaggcggctt ccacatcgcg cttcattcgg
      661 gattgccgat cgtaccggtc cgcgtgtcgg ggagccacga gatcatccct tcgggctcgc
      721 tacgcgtccg gcccggccac gtcgtggtcg aattgttcga cccgatcccg acggagggga
      781 agacggaggc ggacgtcccg gagctcatgg cgcgcgttcg ggacgcgctg ctctcctgaa
      841 cgcggggtcc aggacgaaga aggcggcggt tcccccgccc accaccgccg cggccgtgat
      901 gaacatcgcc tcgtacccga accgttcggc cacgaagccg aaggcggccg cgccggtgac
      961 cagccccatg tcgaaggcgg cggtgaacat cgccatcgcc attgcgcagg agccctcccc
     1021 cacccggtcg agcaccaggg ccgacagggc cgggaagagg agcccgtgcc ccgcccccgc
     1081 cgccgcgccc accaggacga tgcccacctc gccgggaacc gcggggatca ggagattccc
     1141 cgcgcccatc aggaccaggg cgcacaggga gacccactcc cgcggcagcc ggtcgagcat
     1201 tttcctcccg agcgtccgcg ttccgatgac cgacagggcg tagacgaaca cgaacgcccc
     1261 gatggactcc gatccccgca cgaccaggta gacggggagg aaggtgaaga tcgatccgta
     1321 cgccaccccg aagaggtacc ctgccgtgtt gggcacgaga aagggccggg acaggaagag
     1381 cttcagggag gccaacgacg ggcgttcccg cgcggagggc tcgcccatcc cgagcgggaa
     1441 gagggcggcc aggaacgcga tcccgatccc cgcggcgaag aggccctgga accccgcccg
     1501 gccgatcacc cactccccga tccacccgcc caccgacacg gggaggaaga aggagagccc
     1561 gaagatcccg agcgcttccg cgcggcgcgc cggcggcgcg gaagcggcga tgtaggcgta
     1621 cgaagcggcg gtgaagacgg agaaggatgc cccctgcgcc acgcggatgg cgaacaggtg
     1681 cgtgcccggg gcggtcacga agagccaggg aaccgtcgac gctccggcca ggaacgcgcc
     1741 gagcgacagg aaggccctcc gcgccccccg ccccaccacc atcccgagcc cgggtttcgg
     1801 gacgaccgac acgagcgcgc ccgtcgccat gagaacgccg
//
LOCUS       DATGYW010000167         1814 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_121870, whole genome shotgun sequence.
ACCESSION   DATGYW010000167 DATGYW010000000
VERSION     DATGYW010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121870"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..522
                     /gene="trmD"
                     /locus_tag="VK429_02240"
     CDS             <1..522
                     /gene="trmD"
                     /locus_tag="VK429_02240"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013370650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HLN90662.1"
                     /translation="GGMVMKPEPIFAGVEALRAAHGPGRVILLSPAGSLLTPETAARL
                     AKEGHLILLCGRYEGVDQRVADHLADEELSIGDYVLSGGELPALVLIDAVARFLPGVL
                     GDPAAPHNDSFSRGILEAPHYTRPRDFRGWTVPEVLLSGDHAAVAAWRKAEGERRTAR
                     NRPDLLKKKLTDP"
     gene            587..1039
                     /gene="rplS"
                     /locus_tag="VK429_02245"
     CDS             587..1039
                     /gene="rplS"
                     /locus_tag="VK429_02245"
                     /inference="COORDINATES: protein motif:HMM:TIGR01024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HLN90663.1"
                     /translation="MAMSLLKDIESRQQRKDLPKFSVGDTVRVFSRIKEGEKERVQYF
                     EGIVIGFHRNAVSTTFKVRKESYGVGVERTYPIHSPLLEKIEVKKRGDVRRAKLFYLR
                     DVSGKKARIREKKDWLSKKGIVVPSEGVAEGPAVSADAPPAPAETPKE"
     gene            1002..1640
                     /locus_tag="VK429_02250"
     CDS             1002..1640
                     /locus_tag="VK429_02250"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015904940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HLN90664.1"
                     /translation="MRRPPPRRRPRSSAVPFEGFEANVRGRGYSAPAGVDEAGRGPLA
                     GPVVAAAVIFPPGYSHPGIRDSKKLSPIQRERLYPVITADAVAFGIALATPEEIDELN
                     ILRASLLAMRRAVEALLLPADFLFIDGNQRVACDVPQETLVGGDDRCVSIAAASILAK
                     VSRDRMMMEYDLLYPGYGLSGHKGYPTRVHLEAIRRLGPTPIHRRTFRGVVV"
     gene            1637..>1814
                     /locus_tag="VK429_02255"
     CDS             1637..>1814
                     /locus_tag="VK429_02255"
                     /inference="COORDINATES: protein motif:HMM:NF014119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HLN90665.1"
                     /translation="MILPPEARRAQGDAAEEQACRHLDRSEFTIVERNFRTRGGEIDI
                     VARKGDLLVFVEVRS"
BASE COUNT          293 a          611 c          628 g          282 t
ORIGIN      
        1 ggcgggatgg tgatgaagcc cgagccgatc ttcgccgggg tcgaggcgct ccgcgccgcc
       61 cacgggccgg ggagggtcat cctcctctcc cccgcgggct ccctcctgac gccggagacc
      121 gccgcccggc tggcgaagga ggggcacctg atcctcctct gcggccggta cgaaggggtg
      181 gaccagcgtg tggcggacca cctggccgac gaagagctct ccatcgggga ttacgtcctc
      241 tccggcgggg aactgccggc gctggtgctg atcgacgccg tggcccggtt cctgccgggg
      301 gtgctggggg acccggcggc gccgcacaac gactcgtttt cgcgggggat cctggaagcg
      361 ccccactaca cgcggccgcg ggacttccgg ggctggaccg tccccgaggt tctcctgtcg
      421 ggggaccacg ccgccgtcgc cgcgtggcgc aaggcggaag gggagcgccg gacggcgcgg
      481 aaccgcccgg acctgctgaa gaaaaaattg acagacccat agcggttgga atatattgtc
      541 aggtcttctt catcaccctt aaccgcaggc agggaaagga cagggcatgg ccatgagtct
      601 cctcaaggat atcgaatccc ggcagcagcg caaggatctc ccgaaattca gcgtggggga
      661 caccgtccgg gtcttctcgc ggatcaagga aggcgagaag gagcgggtcc agtacttcga
      721 ggggatcgtg atcggcttcc accggaatgc cgtctccacc accttcaagg tccgcaagga
      781 gtcgtacggc gtcggcgtgg agcgcaccta cccgatccac tcgcccctcc tcgaaaagat
      841 cgaggtgaag aagcggggcg acgtccgtcg cgcgaagctc ttctacctgc gcgatgtgtc
      901 cgggaagaag gcccgcatcc gcgagaagaa ggactggctt tcgaagaagg ggatcgtcgt
      961 cccgtccgaa ggggtcgccg aaggtccggc cgtttccgcg gatgcgccgc ccgcccccgc
     1021 ggagacgccc aaggagtagc gccgtaccgt tcgaaggctt cgaggcgaac gtccgcggcc
     1081 gggggtattc ggccccggcg ggcgtcgacg aggccggcag gggccccctt gccggaccgg
     1141 tggtcgccgc cgccgtcatc ttccccccgg ggtattccca cccggggatc cgcgactcga
     1201 agaagctttc ccccatccag cgcgaacgcc tctaccccgt gatcacggcc gacgccgtgg
     1261 cgttcgggat cgccctcgcc actcccgaag agatcgacga gctgaacatc cttcgcgcct
     1321 ccctgctcgc catgcggagg gcggtggagg cgcttctcct ccccgccgac ttcctcttca
     1381 tcgacgggaa ccagcgggtc gcgtgcgacg tgccccagga aacgctcgtc ggcggcgacg
     1441 accggtgcgt ctccatcgcc gccgcgtcga ttctcgcgaa ggtgtcgcgg gaccggatga
     1501 tgatggagta cgacctgctc tacccggggt acggcctctc cgggcacaag gggtatccga
     1561 cgcgggtgca cctggaggcg atccgccgcc ttggaccgac acccatccac cgcaggacat
     1621 tccgcggagt cgtcgtttga tccttccgcc cgaggcgcgt cgtgcgcagg gggacgcggc
     1681 ggaggagcag gcgtgccgtc acctcgatcg gtcggaattc acgatcgtgg agaggaattt
     1741 ccggacgcgc ggcggcgaga tcgacatcgt cgcccgcaag ggggatctgc tcgtcttcgt
     1801 ggaggtccgc tcgc
//
LOCUS       DATGYW010000168         2559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_390121, whole genome shotgun sequence.
ACCESSION   DATGYW010000168 DATGYW010000000
VERSION     DATGYW010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2559
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390121"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VK429_02260"
     CDS             complement(<1..228)
                     /locus_tag="VK429_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017244946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HLN90666.1"
                     /translation="MKAAVLGRIAPIGTSPLSLRNVPDPSPGPGEIRVRVRVCGICRT
                     DLHVIEGDLPPRRLPVIPGHQVVGTVEAHGEG"
     gene            complement(225..887)
                     /locus_tag="VK429_02265"
     CDS             complement(225..887)
                     /locus_tag="VK429_02265"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS and ACT domain-containing protein"
                     /protein_id="HLN90667.1"
                     /translation="MFVARRMKKKIVTAAPSASLFEAQRQMREHTIRQVPVVSEDGTL
                     LGIVSDRDIRAAVLPAGLVPGFTAGEAEKFMKNTPVERVMTRKVVTATLTDTLEDAIV
                     LLHDFRVNALPVVDAEGKVAGIITRTDVMEAFIDALGVGEVSSRLEVVVPDRPGTLAQ
                     LTAIIGSFRVNITSVLSTRYVEPGKRANFFRVATLNVGPIRKAIEEAGFEILDPSKFL
                     LP"
     gene            complement(912..1862)
                     /locus_tag="VK429_02270"
     CDS             complement(912..1862)
                     /locus_tag="VK429_02270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018290638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HLN90668.1"
                     /translation="MKRVAWIYHPDYLLHTPPFEHPESPERLVVIADHLRAAGLIDRM
                     VPVTPEYPEDADILSVHDGEYLNKLENACRRGDLTLDSEDTFLNRHSFNIALLAAGGA
                     IAGAKAVAEGTVDRAFCAIRPPGHHAGRDVGMGFCLLNNAAVAARYLQARHGVGKVLI
                     VDWDVHHGNGTQNIFLEDPTVFYFSIHEHPTFLYPGTGRRWEIGKGKGEGATLNAPMA
                     PGAGDAEFRTTFEQTLEPAVERFRPEILLVSAGFDAHRDDPLADLQVTEEGFRFMTRH
                     VLALADRFCGGKVVSLLEGGYEPSSLTSCIELHVRELLGE"
     gene            complement(1901..2506)
                     /locus_tag="VK429_02275"
     CDS             complement(1901..2506)
                     /locus_tag="VK429_02275"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HLN90669.1"
                     /translation="MDVFETMKARQSIRKFRKDPIPREHILRMAEAASWAPTAGNSQN
                     FRFIAVQERETIARMRGIVDEIVSRVTGGEVAGGKATYHNLFAFAPAVICVVGAPYES
                     ATDRTLREKDPERYKARRFQVNPGLQGISAGITQFILAACALGYGTCWMTGPLIAKPE
                     LESALSVRYPEELLAIIAVGKPDAAPPKPPRKAASEITTFR"
BASE COUNT          406 a          855 c          851 g          447 t
ORIGIN      
        1 cccctccccg tgcgcctcta cggttcccac aacctggtgg ccggggatga cggggaggcg
       61 ccggggggga agatccccct cgatcacgtg gaggtcggtc ctgcagatcc cgcagacgcg
      121 cacacgaacc ctgatctccc cggggcccgg cgaagggtcg ggaacgtttc gcagggagag
      181 cggggaggtc ccgatcggag cgatccgccc caggaccgcc gccttcatgg aaggaggaac
      241 ttcgaggggt cgaggatctc gaaccccgcc tcctcgatcg ccttccggat cggcccgacg
      301 ttcagcgtgg cgacgcggaa gaagttcgcc cgcttcccgg gttccacgta ccgggtggaa
      361 agcacgctcg tgatgttcac gcggaaggaa ccgatgatcg ccgtcaactg cgcgagcgtc
      421 cccgggcggt cgggaacgac cacctcgagg cgggaggaga cctcgcccac gccgagggcg
      481 tcgatgaatg cctccattac gtcggtccgg gtgatgatcc ccgcgacttt cccctcggcg
      541 tccacgaccg gcaaggcgtt cacccggaag tcgtgcagca ggacgatcgc gtcttccagc
      601 gtgtcggtga gcgtggcggt gacgaccttt cgggtcatca cccgctccac cggggtgttc
      661 ttcatgaact tctccgcctc cccggccgtg aatcccggca ccaggcctgc ggggagcacc
      721 gcggcccgga tatcccggtc ggacacgatc cccagcaggg tgccgtcctc cgagaccacc
      781 gggacctggc ggatggtgtg ttcccgcatc tggcgctgcg cctcgaaaag agaagcggac
      841 ggggccgccg ttacgatctt tttcttcatt ctgcgtgcga cgaacattgg attgccctcc
      901 gtgggccggg atcactcccc gaggagctcc cggacgtgaa gttcgataca ggacgtgagt
      961 gaggagggtt cgtaccctcc ctcaaggagg gagacgacct tccctccgca gaaccggtcg
     1021 gccagcgcga gcacgtggcg ggtcatgaag cggaacccct cctctgtcac ctggaggtcc
     1081 gcaagcgggt cgtcccggtg ggcgtcgaag cccgccgaga cgaggaggat ctccggccgg
     1141 aacctctcca cggcaggctc gagcgtctgc tcgaaggtcg tccggaactc cgcgtccccc
     1201 gcgccggggg ccatcggggc gttgagcgtc gcgccttccc ccttcccctt gccgatctcc
     1261 caccgtcggc cggtgccggg atagaggaag gtggggtgct cgtggatgct gaaatagaat
     1321 accgtcgggt cctcgaggaa gatgttctgc gtgccgttgc cgtggtggac gtcccagtcg
     1381 acgatgagga ccttccccac gccgtgcctc gcctggaggt accgcgccgc cacggccgca
     1441 ttgttgagga ggcagaaccc catccccacg tcccgtcccg cgtggtgccc gggaggccgg
     1501 atggcgcaga aggcgcggtc gaccgtccct tccgccacag ccttcgcccc cgcgatcgcc
     1561 cctcccgccg ccaggagcgc gatgttgaag gagtgccggt tgaggaaggt gtcctccgag
     1621 tcaagcgtga ggtcgccgcg ccggcaggcg ttctccagct tgttcaaata ttctccgtcg
     1681 tggacggaga ggatatccgc gtcttccgga tactccggcg ttaccgggac catccggtcg
     1741 atcaggccgg ccgcccggag atgatcggcg atgacgacca ggcgctccgg ggattccggg
     1801 tgttcgaacg gcggtgtgtg aaggagatag tcggggtggt agatccaggc aactcgcttc
     1861 atgagcgctc cgtacgcacc ccgatactat atcagatgga ctatcggaac gtcgtgatct
     1921 ccgacgccgc cttgcgcggc ggtttcgggg gggccgcgtc cggcttcccc acggcgatga
     1981 tcgccagcag ctcttcggga taccggacgg agagcgccga ttcaagctcc ggcttcgcga
     2041 tcagcggacc ggtcatccag caggtgccgt accccaatgc gcaggccgcc aggatgaact
     2101 gggtgatccc ggccgagatc ccctgaagtc cggggttcac ctggaaacgg cgcgccttgt
     2161 accgctcggg gtccttctcg cggagggtcc tgtccgtcgc cgattcgtag ggggcgccga
     2221 ccacgcagat cactgcgggg gcgaaggcga acaggttgtg gtaggtcgcc tttcctccgg
     2281 cgacctcgcc tccggtgaca cgcgagacga tctcgtcgac gattccccgc atccgggcga
     2341 tcgtctcccg ctcctggacc gcgatgaacc ggaagttctg ggaatttccc gcggtgggcg
     2401 cccaggacgc ggcctccgcc atccgcagga tgtgttccct cgggatcgga tctttccgga
     2461 acttccggat gctttgtcgg gccttcatcg tctcgaagac gtccattcga ttcctcctgc
     2521 tcggttgagt cgttccaagc ccgagtaccc cagggagca
//
LOCUS       DATGYW010000169         1629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_390154, whole genome shotgun sequence.
ACCESSION   DATGYW010000169 DATGYW010000000
VERSION     DATGYW010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390154"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..298)
                     /locus_tag="VK429_02280"
     CDS             complement(<1..298)
                     /locus_tag="VK429_02280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010940170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump"
                     /protein_id="HLN90670.1"
                     /translation="MDTLTLLGIAVGLAMDAFAVAIATGIVLGTVSGRQTFRLAFHFG
                     LFQFLMPVIGYLAGMTVERYIKGYDHWLAFVLLGYIGGKMVYEGGWGDGGEGNGG"
     gene            367..>1629
                     /locus_tag="VK429_02285"
     CDS             367..>1629
                     /locus_tag="VK429_02285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019994847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HLN90671.1"
                     /translation="MHPDSFGTFSSKTVGGHPFGIFRLEALEKRRVGKVARLPFSIKV
                     LLENLLRHEDGVTVTADDIRALANGSRKEPSDREIAFRPTRVLLQDFTGVPALVDLAA
                     MRDAAKRMGGDPKRINPLMPADLVIDHSVQVDRFAAVAAFPDNVAKEYGRNGERYAFL
                     RWGKESFRNFRVVPPGTGICHQVNLEHLAPVVFTRKDRSGAMAYPDTLVGTDSHTPMI
                     NGLGVVGWGVGGIEAEAAMLGQPISMLIPEVVGFKMTGKLPVGATATDLVLTVAQMLR
                     KKGVVGKFVEFYGKGLSSLSVADRATISNMSPEYGATIGFFPVDRETLSYLLFTGRDR
                     GQVKLVEAYCKAQGLFRTDDTRDPVFSDTLSLDLSTVEPCMAGPRRPQDRVPLKGARE
                     AFRKALSTWGKEARSEAANDGADRWMGEG"
BASE COUNT          273 a          554 c          549 g          253 t
ORIGIN      
        1 tccccccgtt cccctcgccc ccgtctcccc agcctccttc gtacaccatc ttcccgccga
       61 tgtagccgag caggacgaag gcgagccaat ggtcgtaccc cttgatgtac cgctccacgg
      121 tcattcccgc aaggtatccg atcacgggca tcaggaactg gaacagcccg aagtggaagg
      181 cgaggcggaa ggtctggcgg ccggagaccg tccccagcac gatccccgtg gcgatcgcca
      241 cggcgaaggc gtccatggcc agccccaccg cgatcccgag aagcgtcagc gtgtcgatcg
      301 gaacctcccc cggagtgcta ccattgaatc atgttgtaac gataccgcgc gggaggtcgg
      361 gacgccatgc atccggacag tttcggaacc ttttcgagca agaccgtcgg cggacatccc
      421 ttcggaatct ttcgcctgga ggcgctcgag aagcgccgcg tcggcaaggt cgcccgcctc
      481 cccttctcca tcaaggtcct cctcgaaaac ctcctgcgcc acgaggacgg cgtcacggtc
      541 acggcggacg acatccgggc gctcgcgaac ggatcgcgga aggagccgtc ggaccgcgag
      601 atcgcctttc gcccgacgcg cgtgctcctg caggatttca ccggcgtccc cgcgctggtc
      661 gatctggcgg cgatgcgcga tgcggcgaag cggatgggcg gggacccgaa gcggatcaac
      721 ccgctgatgc cggcggacct cgtgatcgac cactccgtgc aggtggaccg gttcgccgct
      781 gtcgccgcct ttcccgacaa cgtggcgaag gagtacgggc gcaacgggga gcggtacgcg
      841 ttcctgcggt gggggaagga gtcgttccgc aacttccggg tcgtcccgcc cggcaccggg
      901 atctgccacc aggtgaatct cgagcacctc gcccccgtcg tcttcacgcg gaaggaccgc
      961 tcgggcgcga tggcgtaccc ggacaccctc gtgggaaccg actcccacac gccgatgatc
     1021 aacgggctgg gcgtggtggg gtggggtgtt ggcgggatcg aggcggaggc ggcgatgctc
     1081 ggccagccga tctcgatgct catccccgag gtggtgggat tcaagatgac cgggaagctc
     1141 cccgtcgggg cgaccgcgac cgacctcgtc ctcaccgtcg cccagatgct gcggaagaaa
     1201 ggcgtggtgg gaaagttcgt cgagttctac gggaaggggc tctcctccct ctccgtggcc
     1261 gaccgcgcga cgatatcgaa catgtcgccg gaatacggcg cgacgatcgg cttcttcccc
     1321 gtcgaccggg agacgctctc ctaccttctc ttcaccggcc gggacagggg gcaggtgaag
     1381 ctcgtcgagg cgtactgcaa ggcgcagggg ctcttccgca cggacgacac gcgcgacccg
     1441 gtcttctccg acaccctttc gctcgacctt tccaccgtgg agccgtgcat ggcggggccg
     1501 cgccggccgc aggaccgcgt gccgctcaag ggcgcgaggg aggcgttccg caaggccctt
     1561 tccacctggg gaaaggaggc gcggagcgaa gcagccaacg acggcgcgga ccgctggatg
     1621 ggggagggg
//
LOCUS       DATGYW010000170         2945 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_229218, whole genome shotgun sequence.
ACCESSION   DATGYW010000170 DATGYW010000000
VERSION     DATGYW010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2945
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229218"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..281)
                     /locus_tag="VK429_02290"
     CDS             complement(6..281)
                     /locus_tag="VK429_02290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90672.1"
                     /translation="MRRKTLIPEEKWEGLRHAMEEAAGTRKTSKTPGLPPPAEGEAAR
                     PERGKKRGAEEEGKKERKGNKEKEKKKKEKKKKKGKKGKGKKKKGKG"
     gene            complement(274..1023)
                     /locus_tag="VK429_02295"
     CDS             complement(274..1023)
                     /locus_tag="VK429_02295"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HLN90673.1"
                     /translation="MRKITVINQKGGTGKTTTAVNLGAALSEMGREVLLVDLDPQAGL
                     TESLGLETSGRPTVAEVLTLEAEPREAFHALTHLTVLPSSPVLAETEKRILRERPSEY
                     PLALKDALAGLRGFDFVIVDCPPSLGALSLMGMVYSGSLLIPLQTQYMALNGLEKILG
                     MVKTIREAGFPMEILGILPCMYDVRTSLSRQVEEHLRDTLRDKVFRTVIRQSISLAEA
                     PARSKDVLSYQPGGRGAEDYRALAQEVLQHA"
     gene            1207..1689
                     /locus_tag="VK429_02300"
     CDS             1207..1689
                     /locus_tag="VK429_02300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90674.1"
                     /translation="MLSARLIEMIQANAEHLTRDVLKDYATNPRTRHWNIVPGPELEQ
                     RVLSTYKNLGNWIGDPREEAVQAEYEEWGRKRYRNGIPLSEVVFAVILLKHHLRRYIR
                     EHGLVEHAGGRQSSQEILPVHLYGIQELNALVGDFFDKALYHLARGYEMEARAAKGTR
                     "
     gene            complement(1757..2419)
                     /gene="phoU"
                     /locus_tag="VK429_02305"
     CDS             complement(1757..2419)
                     /gene="phoU"
                     /locus_tag="VK429_02305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013248947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HLN90675.1"
                     /translation="MKKHYSEQLAGLRELVLRMGGLAEQMTSRVIQALVQRDAGILAE
                     VREMEGQVNHLHVEIDEACIELIALRQPAAADLRFITAAMKIIVDMERIGDQAINIVE
                     RAESLLAVPPLKPLIDIPRMADIAQEMLKASLDAYVNGDDNLAYRTILKDDEVDQLKD
                     QVFRELLTFMMSDPTTIPRAMDLILVSRHIERIADHATNICEDVIFMVKGKDVRHQGP
                     LA"
     gene            complement(2444..>2945)
                     /locus_tag="VK429_02310"
     CDS             complement(2444..>2945)
                     /locus_tag="VK429_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HLN90676.1"
                     /translation="GMVFQQPNPFPRMSVFENVAVGLKLNGKTLSRGEIAERVERSLV
                     MAALWNEVKDHLDLPGVSLSGGQQQRLCIARALAVEPEVLLMDEPCSALDPMSTAKIE
                     ELIEDLSEKYTIAVVTHNMQQAARISDQVAFFLMGELIEMDKSGKIFTNPSDKRTEQY
                     ITGRFG"
BASE COUNT          475 a          986 c          910 g          574 t
ORIGIN      
        1 acgggttacc ccttcccctt cttctttttc cctttcccct tcttcccttt ctttttcttc
       61 ttttccttct tcttcttttc cttctcctta ttccctttcc tttccttctt cccctcctcc
      121 tccgcgccgc gcttcttccc ccgctccggc cgggccgctt ccccctccgc cggcggcggg
      181 agccccgggg tcttcgacgt cttcctcgtt ccggccgctt cctccatcgc gtgccgcagc
      241 ccctcccact tctcttccgg gatcagcgtc ttcctacgca tgctgcaaca cctcctgcgc
      301 cagtgcgcgg taatcctcgg ccccccggcc ccccggctgg taggagagga cgtccttcga
      361 gcgggcgggc gcctcggcga gggagatgct ctgccggatg accgtccgga acaccttgtc
      421 gcgcaacgtg tcccggaggt gctcctccac ctggcgggag agggacgtcc ggacgtcgta
      481 catgcagggg aggataccca gaatctccat cgggaatccg gcctcgcgga tggtctttac
      541 catgccgagg atcttttcca gtccgttcag ggccatgtac tgggtctgga gcgggatcag
      601 cagggagccg gaatacacca tccccatcag ggaaagggcg cccagcgagg ggggacaatc
      661 cacgatgacg aaatcgaacc cccgtagtcc ggccagggcg tccttcaacg ccagggggta
      721 ctccgaaggc cgctcgcgca ggatccgctt ctccgtttcg gccaggaccg gggaggaggg
      781 gaggacggtg aggtgagtga gggcgtggaa cgcctctcgg ggctccgcct cgagcgtaag
      841 gacttccgcg accgtcggcc tgccggacgt ctccagcccg agggactccg tgagcccggc
      901 ctgggggtcc aggtccacaa ggaggacttc ccggcccatt tccgagagcg ccgcgccgag
      961 gttgacggcg gtcgtggtct tcccggtacc gcccttctgg ttgatgactg tgatcttccg
     1021 catggcgccg ccccccccga tccgcgtttt cccggagtgt tccgattata agccaggacc
     1081 acgggtgcat ccgggaaaat ctgtatggaa atccctgcgg gtcgggtaca ctaccaggga
     1141 aggtcccggg tcgtccgacg acatgtattg cgacagaaga aaaattccct atggaggtcg
     1201 aacgccgtgc tctctgcacg actgatcgaa atgatccagg ccaacgccga acacctgacc
     1261 cgtgacgtgc tgaaagatta tgccaccaac ccgcggacgc gccactggaa catcgtgccc
     1321 ggccccgagc tggaacagcg cgtcctgagc acgtacaaaa acctggggaa ctggatcggc
     1381 gatcccaggg aagaggcggt gcaggcggag tacgaggagt ggggccgcaa gcggtaccgg
     1441 aacgggatcc cgctgagcga ggtcgtgttc gccgtgatcc tgctcaagca ccacctgcgg
     1501 agatacatcc gcgagcacgg gctcgtggag cacgccgggg gccgccagtc ctcgcaggag
     1561 atcctcccgg tgcacctgta cgggatccag gaactgaatg ccctggtggg ggatttcttc
     1621 gacaaggcgc tctaccacct ggcgaggggc tacgagatgg aagcccgggc ggcgaaaggc
     1681 acccggtaga gacagatcgc gtcggacccc atgccgacga cggcgatcct tgccgtccgg
     1741 ggtctccggc ccgtttctac gccagcggcc cctggtgccg gacgtccttc cccttgacca
     1801 tgaagatcac gtcctcgcag atgttggtgg cgtggtccgc gatccgctcg atgtggcgcg
     1861 agacgaggat caggtccatg gcccggggga tggtggtcgg gtcggacatc atgaaggtca
     1921 acagctcccg gaagacctgg tccttcaact ggtcgacctc gtcgtccttc aggatcgtcc
     1981 ggtacgccag gttgtcgtcc ccgttgacgt aggcgtccag ggaggctttg agcatctcct
     2041 gcgcgatgtc ggccatccgc gggatgtcga tcagcggctt gaggggcgga acggccagca
     2101 gcgattccgc ccgttccacg atgttgatcg cctggtcccc gatccgttcc atgtccacga
     2161 tgatcttcat cgccgccgtg atgaaccgca gatcggccgc cgccggctgg cgaagcgcga
     2221 tgagctcgat gcacgcctcg tcgatctcga cgtggaggtg gttgacctgc ccctccatct
     2281 cccggacttc ggcgaggatg cccgcgtcgc gctgcacgag cgcttggatg acccggctgg
     2341 tcatctgttc cgccagccca cccatgcgaa ggaccagttc gcgaagcccc gccagctgtt
     2401 ccgaatagtg cttcttcatc cgttcaccgc cttccggtaa gtgtcaacca aaccgcccgg
     2461 tgatgtactg ctccgtccgc ttgtccgacg ggttggtgaa gatcttcccg ctcttgtcca
     2521 tctcgatcag ctcccccatg aggaagaagg cgacctggtc ggagatgcgc gccgcctgct
     2581 gcatgttgtg cgtcacgacg gcgatcgtgt atttttcgct caggtcctcg atcagctcct
     2641 cgatcttcgc ggtggacatc gggtccagcg cagagcacgg ctcgtccatc aggagcacct
     2701 ccggctccac ggcgagggcc cgggcgatgc agaggcgctg ctgctggccg ccggagaggg
     2761 agacccccgg caggtcgagg tgatccttca cctcgttcca gagcgcggcc atgacgagcg
     2821 accgttcgac cctctccgcg atctccccgc gggaaagcgt tttcccgttc agcttgagcc
     2881 cgacggcgac gttctcgaat accgacatgc gtggaaacgg gttcggctgc tggaagacca
     2941 tcccg
//
LOCUS       DATGYW010000171         1561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_70660, whole genome shotgun sequence.
ACCESSION   DATGYW010000171 DATGYW010000000
VERSION     DATGYW010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70660"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /locus_tag="VK429_02315"
     CDS             <1..439
                     /locus_tag="VK429_02315"
                     /inference="COORDINATES: protein motif:HMM:NF013962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HLN90677.1"
                     /translation="EVNLVNARMVAEERGIKVSESKTPKSEPYASLLKVTVVTAKGES
                     SVAGTIFGGAPRIVQIDSFAIVAELSGGILMLRNQDVPGVIGRIGTFLGEKGINIAGL
                     RLGRTEVGGTAVSLINVDNAVPENVLAQLRKLPNIMDAQYLIF"
     gene            458..>1561
                     /locus_tag="VK429_02320"
     CDS             458..>1561
                     /locus_tag="VK429_02320"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015722052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HLN90678.1"
                     /translation="MKSVIVLGAQWGDEGKGKIVDIYSEFADTIVRPTGGNNAGHTLV
                     VKGEKFIFHLIPSGILHPGKKCVIANGVVIDPKVLLMEIDRLKERGYLKDDAQLKIGL
                     LANIIFPYHILLDKAREERLGSRKIGTTARGIGPCYEDKIARVGIRACDLLRPESFAE
                     KLRANLEAKNFLLMNYFGGEEVPFQATLDEYLAYGERLKPHLIDTSLFVNEEIARGAK
                     LLFEGAQGTLLDIDHGTYPFVTSSNTTAGGACTGSGIGPTKIGGVIGVSKAYATRVGG
                     GPFPTELFDEEGQKIRDRGNEYGSTTGRPRRCGWFDAPVVRYANRLNGLAGVALTKLD
                     VLSGLPSVKVCVAYEIDGVRREQVPLSLTEFEAA"
BASE COUNT          306 a          480 c          531 g          244 t
ORIGIN      
        1 ggaagtgaat ctcgtcaacg cccggatggt ggccgaggag cgcggcatca aggtaagcga
       61 gtcgaagact cccaagtcgg agccgtacgc gagcctcctc aaggtcactg tcgtgacagc
      121 gaagggcgag tcgtcggtgg ccggcaccat cttcggaggg gcgccgagga tcgtgcagat
      181 cgactccttc gccatcgtgg cggagctctc cggcggcatc ctcatgctgc ggaaccagga
      241 cgttccgggc gtgatcggcc ggatcggcac cttcctcggg gagaagggga tcaacatcgc
      301 cggcttgcgg ctgggcagga ccgaagtcgg tggaacggcc gtttcgctca tcaacgtgga
      361 caacgccgtc cccgagaacg ttctcgcgca gcttcgaaag cttccgaaca tcatggacgc
      421 ccaatacctg atcttctgag aaagaaggcg accaccggtg aaaagcgtca tcgtgctcgg
      481 cgcccagtgg ggcgatgagg gcaagggaaa gatcgtagac atatactccg agttcgccga
      541 tacgatcgtg cgccccaccg gggggaacaa tgccggccat accctcgtgg tcaaagggga
      601 gaagttcatc ttccacctca tcccctccgg catccttcac ccggggaaga agtgcgtcat
      661 cgcaaacggg gtggtgatcg acccgaaggt tcttctcatg gagatcgacc gcctgaagga
      721 gcgcggctac ctgaaggacg atgcgcagct gaagatcggg ctgctggcga acatcatctt
      781 cccctaccac atcctcctcg acaaggcgcg ggaagagagg ctagggagca ggaagatcgg
      841 gaccaccgcg cgggggatcg ggccatgcta cgaggacaag atcgcgcgcg tcggcatccg
      901 ggcgtgcgac ctgctccggc ctgaatcgtt cgcggagaag cttcgcgcca acctcgaggc
      961 gaagaacttc ctgctgatga actatttcgg cggcgaggaa gtcccctttc aggcgacgct
     1021 ggacgaatac ctcgcgtacg gggaacgcct gaagccccac ctgatcgaca catcgctctt
     1081 cgtcaacgag gagatcgcgc ggggggcgaa gctgctgttt gaaggggccc aggggacgct
     1141 gctcgacatc gaccacggga cctacccgtt cgtcacctcc tcgaacacga cggcgggcgg
     1201 cgcgtgcacg ggatccggca tcggtccgac gaagatcggc ggcgtcatcg gggtgtcgaa
     1261 ggcgtacgcg acgcgcgtcg gcggcgggcc gttccccacg gaactgttcg acgaggaggg
     1321 gcagaagatc cgggaccgcg ggaacgagta cggatcgacc acggggcgtc cgcggcggtg
     1381 cggctggttc gacgccccgg tcgtgcgcta cgccaaccgc ctcaacgggc tggccggcgt
     1441 cgcgctgacc aagctggacg tcctctcggg cctgccgagc gtgaaggtgt gcgtcgcgta
     1501 cgagatcgac ggcgtacgcc gggagcaggt ccccctgtca ctgaccgaat tcgaggcggc
     1561 c
//
LOCUS       DATGYW010000172         2116 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_9333, whole genome shotgun sequence.
ACCESSION   DATGYW010000172 DATGYW010000000
VERSION     DATGYW010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9333"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..606)
                     /locus_tag="VK429_02325"
     CDS             complement(<1..606)
                     /locus_tag="VK429_02325"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HLN90679.1"
                     /translation="MIPAYLLPVALLLAAMLPGAVAAQDGVDPPRIFFEKKVYSDTVG
                     GKQSFFETYTVEKGDTVWKILRRNEPLPPDLYADRLKEFQRANPKVSDPSRIAPGQTL
                     LIPSGGRPKAISDGKTVDYAVMRGDSLSKILFSRDVPRRQWKKYLDAIREINTSVTDV
                     NRIVAGKTLHLPTEEYFTQAMPPVEPEKTMASAEPVKEEIEA"
     gene            complement(603..1388)
                     /locus_tag="VK429_02330"
     CDS             complement(603..1388)
                     /locus_tag="VK429_02330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90680.1"
                     /translation="MPTTIYELNRMPEEERSALLSLLVPARLFSMFSIDPRTFRNRSG
                     KVCVKFTCPDEMPFFQIDVRRDPADTDAAYFLDVSTSAFGQMEISFVIVNDPDGERFG
                     IDRDENGLETYFGTARRNVPEELRAMEAGLAPGQVRRGLRMMSEMVACWDAFFGRLGY
                     KFYFLEPLGYNSAILYERTGFQYLKGKDKMVWVDREFRPGGLLHERLDGSTPFRRPSL
                     AMTVRGRAWAIHDGVLDEPWESPKMYKTVGVHAGVDTFTGEKY"
     gene            complement(1398..>2116)
                     /locus_tag="VK429_02335"
     CDS             complement(1398..>2116)
                     /locus_tag="VK429_02335"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLN90681.1"
                     /translation="FLHAIGVLILEGYGLTETSTVTTVNRLERYKFGTVGKALPGTEI
                     RISADGEILVRGPHIFREYFNDPAATRESIEPDGWFHTGDIGVLDEEGFLRITDRKKD
                     IIVTSGGKNIAPQNLENLLKNDRYVSQAFVYGDRKKFLTALLTLAPEEIVPWAARQGI
                     QDRSVEALAKHPEVLQLMRERVDGINRGLATFEQVKKFAILGTDFSQETGELTPTLKV
                     RRKVVVEKYGRILDDLYGKD"
BASE COUNT          364 a          712 c          635 g          405 t
ORIGIN      
        1 cgcctcgatc tcctccttca ccggttccgc ggaggccatc gttttttccg gctccaccgg
       61 cggcatcgcc tgcgtgaagt actcttccgt cggaagatgg agcgtcttcc cggcgacgat
      121 ccggttcacg tccgtgaccg aggtgttgat ctcccggatc gcatcgaggt acttcttcca
      181 ctgccggcgc ggaacgtcgc gggagaagag gatcttcgaa agggaatctc cccgcatcac
      241 cgcatagtcg accgtctttc cgtcgcttat cgccttcggc cttccgccgg acggaatgag
      301 gagtgtctgc cccggagcga tccgcgatgg gtcggagacc ttcgggttgg cacgctggaa
      361 ttccttgaga cgatccgcgt acaggtccgg ggggaggggt tcgttccgcc ggaggatctt
      421 ccagaccgtg tcccccttct ccacggtgta cgtctcgaag aaactctgtt tcccgcccac
      481 cgtgtcggaa tagaccttct tctcgaagaa gatccggggg ggatccaccc catcctgggc
      541 cgccaccgcg ccgggcagca tcgcggccag aagaagcgca acgggaagaa ggtacgccgg
      601 gatcaatatt tctccccggt aaaggtgtcg acgcccgcgt gcacgccgac ggtcttgtac
      661 attttcgggc tttcccacgg ctcgtcgagg accccgtcgt ggatcgccca cgcccgcccc
      721 cggacggtca ttgcgagaga aggccgccgg aacggcgtgc tcccgtcgag ccgctcgtgc
      781 aagagacccc cggggcggaa ctccctgtcg acccacacca ttttatcctt tcccttcagg
      841 tactgaaacc ccgtccgctc gtagaggatc gcgctgttgt accccagcgg ctcgagaaag
      901 tagaacttgt accccagccg gccgaagaag gcgtcccagc acgccaccat ctccgacatc
      961 atccgcaagc ccctgcgcac ctgccccggc gccagaccgg cctccatcgc ccggagttcc
     1021 tccggcacgt tccgccgcgc ggtcccgaag tacgtctcga ggccgttttc gtcccggtcg
     1081 atcccgaacc gctccccgtc gggatcgttg acgatgacga aggagatctc catctgaccg
     1141 aacgccgagg tcgacacatc gaggaagtac gccgcgtccg tgtccgcggg gtccctccgg
     1201 acgtcgatct ggaagaatgg catctcgtcc gggcaggtga acttcacgca cactttcccg
     1261 gatcgattcc ggaacgtccg gggatcgata gaaaacatcg aaaagaggcg cgccgggacg
     1321 agcagagaca ggagcgcgga ccgctcctcc tccggcatcc ggttcagttc atagatcgtg
     1381 gtgggcaacg gtcccggtca atccttcccg tagagatcgt cgagaatccg cccgtacttc
     1441 tcgaccacca ctttgcggcg caccttgagc gtgggcgtca gttcgccggt ttcctgggag
     1501 aagtccgttc ccagaatcgc gaacttcttc acctgctcga aggtggccag cccccggttg
     1561 atcccgtcga cccgctcccg catcaattgc agcacctcgg ggtgcttcgc cagcgcctcg
     1621 acgctgcgat cctggatccc ctgccgggcg gcccagggga cgatctcctc gggagcgagc
     1681 gtcaggagtg cggtcaggaa ctttttccgg tcgccgtaca cgaacgcctg gctgacgtac
     1741 cggtcgttct tgaggagatt ctcgagattc tggggagcga tgttctttcc cccggaggtg
     1801 acaatgatgt ccttcttccg gtcggtgatg cggaggaacc cctcctcgtc gagaaccccg
     1861 atatcccccg tatggaacca gccgtccggt tcgatcgact cccgggtggc ggcggggtcg
     1921 ttgaaatact cgcggaagat gtgcggcccg cggacgagga tctcgccatc cgcggagatg
     1981 cgaatctccg tccccgggag cgccttcccc acggtgccaa acttgtaccg ctcgagccgg
     2041 ttgaccgtcg tgaccgtgga ggtctccgtg agcccgtacc cctcgaggat gagaacgccg
     2101 atggcgtgca ggaact
//
LOCUS       DATGYW010000173         2093 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_122612, whole genome shotgun sequence.
ACCESSION   DATGYW010000173 DATGYW010000000
VERSION     DATGYW010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122612"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..770
                     /locus_tag="VK429_02340"
     CDS             <1..770
                     /locus_tag="VK429_02340"
                     /inference="COORDINATES: protein motif:HMM:NF014874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HLN90682.1"
                     /translation="ERLAQECPTATTFGFSRSWDIHPEEMEMTWEGTRMVLATPAGSL
                     ALRSPLIGAHNVSNVMAAVAGGLLLSVSPDAIAAGVAAAGMIPGRLEPIPNARGLQVF
                     VDYAHTPDGMDRVLSTLRGLTDGRLISVFGCGGNRDRGKRPAMGRVAAIRSDIVVVTS
                     DNPRDEDPASIIAEIVPGLTTEGLVEAHRPATWREGFFRVEADRKAAIALALSLAEPG
                     DTVAIVGKGHEDVQIIGDRRLPFDDRQAVRDVLAAGR"
     gene            772..>2093
                     /gene="murF"
                     /locus_tag="VK429_02345"
     CDS             772..>2093
                     /gene="murF"
                     /locus_tag="VK429_02345"
                     /inference="COORDINATES: protein motif:HMM:TIGR01143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HLN90683.1"
                     /translation="MTLPEVIGAIHPLREAGGISPSEPIGAVTADSRQVGPGSVFIAL
                     PGERADGADFVDEAFGKGALAAIVSEAGARKVPGGLAGSKPVFVVRDPVEALGDMARA
                     HRLRHRDIPLVGITGSSGKTTTKEMLFCLLSRSRSVLRNPGNRNNLIGMPLALLELSE
                     EHDAAILEMGSNAPGEIARLAGIACPDIAVITNIAPAHLEGFRTMEGVAREKGDLFRA
                     LDGAGTAVVNATDLRVVREAGRCRAEKVHYGVALNDFSGRILSMSDAGMRIAVRTPAG
                     EFSSHVGIAGEHHLMNALAATAAAFTLGMRPAEMEEGFAGFVSVPGRFHAVPLRGGGL
                     LLDDSYNANPASTEAALRSLASLARGRRTVVVFGDMLELGEGSTASHFRIGHLIAALS
                     VDRLFAFGAAAAHAARGAKEGGMSGIAIDHTTDRGRLREAVRGFVREG"
BASE COUNT          305 a          699 c          762 g          327 t
ORIGIN      
        1 gcgagcgcct cgcgcaggaa tgtcccaccg cgacgacgtt cggtttctcc cgctcctggg
       61 acattcaccc ggaggagatg gagatgacgt gggaagggac ccggatggtc ctcgccacac
      121 cggccggttc cctggcgctg cgatcccccc tgatcggggc gcacaacgtg tccaacgtga
      181 tggcggccgt cgcgggaggt ctcctcctct ccgtctcccc cgatgcgatt gccgccggtg
      241 tcgccgccgc ggggatgatc cccggccggc tggagccgat accgaacgcg cgtgggctcc
      301 aggtgttcgt ggactacgcc cataccccgg acgggatgga ccgggttctc tcgaccttgc
      361 gggggttgac ggacggacgg cttatctccg tgttcggctg cggcggaaac cgcgaccgtg
      421 ggaagcgccc tgcgatgggc cgggtggcgg cgatccggtc cgacatcgtg gtggtgacct
      481 ccgacaaccc gcgggacgag gatcccgctt cgatcatcgc ggagatcgtc ccggggttga
      541 cgacggaagg tcttgtggag gcgcatcgac cggccacctg gcgggagggg ttcttccgcg
      601 tggaggccga caggaaagcg gcgatcgctc tcgccctctc tctcgcggag ccgggggaca
      661 ctgtggcgat cgtcgggaaa ggacatgagg atgtccagat catcggagat cggcgcctgc
      721 cgttcgacga ccggcaagcg gtccgggacg tgcttgcagc ggggaggtag aatgacgctc
      781 cccgaagtga tcggggcgat ccacccgttg cgggaggcgg gggggatctc cccgtcggaa
      841 ccgatcggcg cagtcacagc cgacagccgt caggtcgggc cgggttccgt cttcatcgcc
      901 ctcccggggg agcgcgccga cggggcggac ttcgtcgacg aggcgttcgg gaaaggcgcc
      961 ctcgcggcga tcgtctcgga ggcgggcgca cggaaggtgc cgggcggact ggccggttcg
     1021 aagccggtct tcgtcgtgcg ggacccggtg gaagccctcg gcgacatggc gcgggcccac
     1081 cggcttcgcc accgggacat cccccttgtg ggaatcaccg gaagctccgg gaagacgacg
     1141 acgaaggaga tgctgttctg tctcctctcg cggtcccgca gcgtgctgcg gaatcccgga
     1201 aaccggaaca acctcatcgg gatgcccctg gcgctgctcg agctgtcaga ggaacacgac
     1261 gcggcgatcc tcgagatggg gtcgaatgcc ccgggggaga tcgcccggct ggccggcatc
     1321 gcctgccccg atatcgcggt gatcaccaac atcgcccctg cgcacctcga agggttccgc
     1381 accatggaag gggtcgcgcg cgaaaagggg gacctcttcc gggcccttga cggcgccggc
     1441 accgccgtgg tcaacgcgac ggacctccgc gtcgtccggg aggcgggccg ttgccgcgcg
     1501 gaaaaggtcc actacggcgt cgcgctgaac gacttctccg gacggatcct ctcgatgtcc
     1561 gacgcgggga tgcggatcgc cgtccgaacg cccgcgggcg agttctcttc ccacgtcggg
     1621 atcgccgggg agcaccacct gatgaacgcc cttgcggcga cggccgccgc cttcaccctc
     1681 ggaatgcgcc ctgcggaaat ggaggagggg tttgcgggct tcgtctccgt gccgggccgg
     1741 tttcacgcgg tgccccttcg gggcggcggg ctcctgctgg acgacagcta caacgccaac
     1801 cccgcatcca ccgaggccgc gttgcgctcc ctcgcgtcgc tggcccgggg tcggcgcacc
     1861 gtcgtcgtgt tcggcgacat gctggaactc ggagagggtt ctacggcgtc gcatttccgc
     1921 atcggacatc tgatcgccgc tctctccgtc gaccggctct tcgcgttcgg cgccgccgcg
     1981 gcccatgccg cgcgcggggc gaaggagggc gggatgagcg gcatcgcaat cgatcacacg
     2041 accgaccgcg ggcggctccg ggaggcggtg cgcggattcg tccgggaggg gga
//
LOCUS       DATGYW010000174         2571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_167874, whole genome shotgun sequence.
ACCESSION   DATGYW010000174 DATGYW010000000
VERSION     DATGYW010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2571
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167874"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..915)
                     /locus_tag="VK429_02350"
     CDS             complement(67..915)
                     /locus_tag="VK429_02350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012529582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90684.1"
                     /translation="MKKSSRSIHRIGVALAAFALCGLTASIAAATPSTQVWIPSTDIQ
                     AYKTVHLNFDTYLRTGKEPDSNVGYFGIPDGGNLPPLYDFGPTVGVLPFEKIQAEVGF
                     DLVYGGANTPAGLDKYPIYGNFKIGMPEDNTWIPAVAVGMYGIGTKSGEVTNGVYTKA
                     GTNADIYYGLVAKTLPVVGRFSLGWYGLNKKASVAGVYDRNGTKGDDNGLLASWDRTM
                     AEISDKLWVAIDYQGGKNAYGATSFGVSWAFAKNVSVILGYDIFNNKDRAGQNTATIQ
                     VDINFP"
     gene            complement(1323..2291)
                     /locus_tag="VK429_02355"
     CDS             complement(1323..2291)
                     /locus_tag="VK429_02355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90685.1"
                     /translation="MSRVKIYALLSSTAAAGCGVLIALGGAVCFMGAAKAIPDWPTTF
                     GGIAPPSEPGAFVEYLHRAGAVVVGLLALALAATGLLWFRSRPWLLVPPLLALVLLAV
                     VSTIGALVVLGSVSPVIAAVDLASALMVLALMVTAALTARFFLRNPDGTFHLAFRDSF
                     SRLALGSGIALYVVLFTGLSVGNSAPGNCLGLPLWGGYPLTAGGEEWLRTAHLLLSGA
                     TGVLVVSLVVTAWIKRRTERRELLLANGAGALFVTSLVAGELAAAGGFPWSLLAIRVC
                     ATVLLWVVFTALVVREGLKAAVPEGERDALFSPTGEKHVSDATHCT"
BASE COUNT          513 a          774 c          853 g          431 t
ORIGIN      
        1 gtcctccccg acgccgccgt tacaggcggc atccttatcg ttgtcccggg ttgcgggctg
       61 tcgcctctac gggaagttga tgtcaacctg tatggtggcg gtgttctgcc cggcccggtc
      121 cttgttattg aagatgtcgt agccgaggat cacgctcacg ttcttcgcga aggcccagga
      181 gactccgaag ctggtggcgc cgtaggcgtt cttcccgccc tgatagtcga tggcgaccca
      241 cagcttgtcg gagatctcgg ccatggtccg gtcccaggag gccagcagtc cgttgtcgtc
      301 ccctttcgtg ccattgcggt cgtacacgcc ggccaccgaa gccttcttgt tcaggccgta
      361 ccagcccagg gagaagcgac ccacgacggg gagcgtcttg gcgacgaggc catagtagat
      421 gtccgcgttc gtgccggcct tcgtgtagac gccgttcgtg acttccccgc tcttcgtccc
      481 gatgccgtac attccgaccg ccacggcggg gatccaggtg ttgtcctccg gcatcccgat
      541 cttgaagttg ccgtagatgg gatacttgtc caggcctgcc ggggtgttcg caccgccgta
      601 gaccaggtcg aagccgacct ccgcctggat cttctcgaac ggcaggacgc cgacggtcgg
      661 cccgaagtcg tacaggggcg ggaggttgcc gccgtcgggg atgccgaaat atccgacgtt
      721 ggagtcgggt tccttccccg tccggaggta tgtgtcgaag ttcaggtgca cggtcttgta
      781 cgcctggatg tccgtcgacg ggatccatac ctgcgtggac ggcgtggccg cggcgatcga
      841 cgccgtcagg ccgcatagcg caaacgccgc gagggcgacc ccgatccggt ggatgctcct
      901 gctgctcttc ttcatggtgc cccccgttct tcctatagag ggggtacccc agggagcgta
      961 tttcgtccgg gagtggggcg ccctcttagg gagatagatt gtcgcttcgg accgggtgga
     1021 gagcatcgcc cgtgccaacg tcgggaagac gggggagaag gtgtgacaag agctcggaag
     1081 aaaaaaggta aatggagcgc ggcgcggcag ggggacgggg aggggcgcgg tccggcgatg
     1141 ctacaaaaat gtccgatatc ctacattaag tgcgtcactt cataaacacg gtgacgaatc
     1201 aggactttcc cgcgccccgc cttccgatac cgtcgtcgtc ttcttccgaa gctctccctc
     1261 tgcgcgtgga aggcgctggc ggtggaaggc agcggcaacg gttacctaaa aagcgtccgc
     1321 gatcaggtgc aatgggtcgc gtcggacaca tgcttctccc cggtggggga aaacaacgca
     1381 tccctttcgc cctcgggaac cgcggccttc agtccctcgc gaacgaccaa cgccgtaaat
     1441 accacccaga gcagcaccgt ggcgcagacg cggatcgcca gcagagacca aggaaagccg
     1501 ccggctgcgg ccagctcacc ggccacaagc gacgtgacga acaatgcgcc cgcgccgttg
     1561 gcgaggagca gttcgcgcct ctccgtgcgt cgtttgatcc acgctgtcac gacgagtgag
     1621 acaacgagca cgccggtcgc gccggagaga aggaggtgcg ccgttcggag ccattcctct
     1681 ccgccggcgg tgagtggata accgccccac aggggcaggc ccaggcagtt ccccggggcg
     1741 gagtttccca cggaaagacc ggtgaacagc accacgtaca acgcaatacc cgagccgagg
     1801 gctagccggg aaaacgaatc gcggaaggcg aggtggaagg tgccgtccgg attccggagg
     1861 aaaaaacgcg ccgtcagcgc ggccgtcacc atcagggcaa gcaccatcag ggcgctggcc
     1921 aggtccacgg cggcgattac cggcgaaaca gagccgagca cgacgagcgc gccgatagtg
     1981 gaaacgactg cgagcaagac cagggccaga agcgggggca cgaggagcca gggacgggac
     2041 cggaaccaga ggagccctgt agcggcgagg gcgagggcca ataggccgac gacgaccgcc
     2101 cccgcacggt gcaggtattc aacgaaagcc cccggctcac tgggaggtgc aataccgccg
     2161 aaagtggtgg gccaatcagg gatggctttg gcggcgccca taaagcacac ggccccgccc
     2221 agtgcgataa gtacgccgca gcccgcggcc gcagtggaag aaagcaaggc gtagattttg
     2281 acacgcgaca tgtccgattc ctcatgtatt cgtgtcgatt tcgccgtatc gatgttctca
     2341 ggctaccatg tggtgcgaat cgagatgata catgaaaacg gacaatatcc cggcattgga
     2401 tggcgagggg atggttcggg aggagctaca aaaatatccg atatcctaca gtaagcgcat
     2461 cagatcataa atcggtgacg agccggaagc ccgacggagt agccggagga gggggggcgg
     2521 agtgaggtaa agcgccccgc tcccggagga atgcgctctc tggggtaccc c
//
LOCUS       DATGYW010000175         1746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_230144, whole genome shotgun sequence.
ACCESSION   DATGYW010000175 DATGYW010000000
VERSION     DATGYW010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230144"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /locus_tag="VK429_02360"
     CDS             complement(<1..515)
                     /locus_tag="VK429_02360"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF21 domain-containing protein"
                     /protein_id="HLN90686.1"
                     /translation="MDIVLLVSFCLLMEALFTGSEMVLVSADRNKLTERARGGDRGAA
                     LALDLLSKPERALAITLTATNVFVVFSSVVVTSRLLPRFGEYASLAAVLLVTPLVIVL
                     GEVVPKSFVRPRADRLVSAAGRIVRMGEISLYPLVAAVSWAARMLSAPFGGIPPMRAL
                     VTREELSLLLQA"
     gene            complement(516..>1746)
                     /locus_tag="VK429_02365"
     CDS             complement(516..>1746)
                     /locus_tag="VK429_02365"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HLN90687.1"
                     /translation="FLASAFFSATETALFALRRVDLLKWKEEGNRRAERIAQMLSKPN
                     RLIATIFLGNEIVNVAISSVIAALLLPHLQAGVGEGLALLLGTLGILLIGDVTPKCLV
                     WPRARAFSLMAAIPLHAFSQLVAPARFVLEKIAGGVLFLLGERGGPQTREMISEAEFR
                     ALVDAGEETGTLDAEEKELIHNIFELTDRRAGEIMTPLPDVFMIPRDLPYEELVARYR
                     RYRRSRIPVYEGERHNVVGVLHFKQLLRPMAEGGTPPVWQDLVRPPYVVPEVQKLHPL
                     LREFQRRKVHIAVVVDEYGETCGIVTLEDVLEELFGEILEERDREEREIVLRPDGSSL
                     VLGKTQIRHFNEAFGTEIPDLDFDTVAGFLLHEFGRMPSPGEKTSREGISFTVERMKG
                     LRIVEVGVRPALTGKEG"
BASE COUNT          313 a          607 c          580 g          246 t
ORIGIN      
        1 gcctgcagca gcagcgaaag ctcctcccgg gtcacgagcg cccgcatcgg ggggatcccg
       61 ccgaacggag cagaaagcat ccgcgccgcc caggagaccg ccgcgaccag cggatagagc
      121 gagatttccc ccatgcggac gatgcgcccg gcggcggaga caagccggtc cgccctgggc
      181 cgcacgaagc tcttcgggac gacctcgccg agtacgatga cgagcggggt gaccagcagg
      241 acggcggcga gcgacgcgta ttccccgaat cggggcagga gacgcgaggt gacgaccacc
      301 gaggagaaga ccacgaagac gttcgtcgcc gtgagggtga tcgcgagggc gcgctccggt
      361 ttcgacagga ggtcgagcgc cagggcggct ccccggtctc ccccgcgggc ccgctcggtg
      421 agcttgttcc ggtccgccga gaccagcacc atctccgaac cggtgaagag cgcctccatc
      481 aggagacaga aggagaccag gaggacgatg tccaactaac cctccttccc cgtcagcgcg
      541 gggcgcacgc cgacctcgac gatccgcagc cctttcatcc gctccacggt gaaggagatc
      601 ccctcgcgcg aggtcttctc gccgggggac ggcatcctgc cgaactcgtg caggaggaac
      661 ccggcgaccg tgtcgaaatc cagatccggg atctccgtcc cgaacgcctc gttgaaatgg
      721 cggatctgcg tcttcccgag gacgagggag gacccgtcgg gccgcagcac gatctccctc
      781 tcttcccggt cgcgctcctc cagaatctcc ccgaacagct cctcgaggac gtcctccagc
      841 gtgacgatcc cgcacgtctc cccgtactcg tccacgacga cggcgatgtg caccttccgc
      901 ctctggaact cccgcagcag cggatggagt ttctgcacct cggggacgac gtagggaggc
      961 cggacgagat cctgccacac cggcggcgtc cctccctcgg ccatcgggcg gagcagctgc
     1021 ttgaaatgga ggacaccgac gacgttgtgc cgctcgccct cgtagaccgg aatccgggag
     1081 cggcggtacc ggcggtaccg ggcaaccagt tcctcatacg gcagatcccg cgggatcatg
     1141 aagacgtcgg gcaggggggt catgatctcc cccgcgcgcc ggtcggtcaa ttcgaagatg
     1201 ttgtggatga gctccttctc ttccgcgtcg agggtgccgg tctcctctcc cgcgtcgacc
     1261 agggcgcgga actccgcctc ggagatcatt tcgcgggtct gggggccgcc ccgctccccc
     1321 agcaggaaga ggactccgcc tgcgatcttc tcgagcacga accgcgcggg agcgaccagt
     1381 tgggagaacg cgtggagcgg aatggccgcc atcagcgaga acgcgcgggc ccgcggccac
     1441 acgaggcact tcggcgtcac gtccccgatc agcaggatcc ccagcgtgcc gaggagaagg
     1501 gcgaggccct cgccgacccc ggcctgaaga tgcggcagca ggagggcggc gatgaccgag
     1561 gagatcgcca cgttgacgat ctcgttcccg aggaagatcg tcgcgatcag ccggttcggc
     1621 ttcgagagca tctgcgcgat ccgctcggcc ctgcggttcc cctcctcctt ccacttcagg
     1681 agatccaccc ggcgcagggc gaacagcgcc gtctccgtcg cggagaagaa cgcggaggcg
     1741 aggaac
//
LOCUS       DATGYW010000176         3867 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_335145, whole genome shotgun sequence.
ACCESSION   DATGYW010000176 DATGYW010000000
VERSION     DATGYW010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3867
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335145"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..1434)
                     /locus_tag="VK429_02370"
     CDS             complement(151..1434)
                     /locus_tag="VK429_02370"
                     /EC_number="1.1.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012641607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004022 - alcohol dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0047988 - hydroxyacid-oxoacid
                     transhydrogenase activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid-oxoacid transhydrogenase"
                     /protein_id="HLN90688.1"
                     /translation="MGVEMETIIPLIMGKLKFGVGATEELGYELRTLGARSVLLVTDR
                     GLRGHGMVDKVKGIIEGEKIALRIFDEIHCEPTDRSMRQAIDVAGGADFDAVVALGGG
                     SVLDTAKAVNLYRTWPADLLEYVNAPIGKGTPVPGPLKPLIALPTTAGTGSETTTVIV
                     MDFLDLHVKTGISHQHIRPTVALVDPLNSLSAPAAVTANTGLDVLTHAAESFTIKPYN
                     MRPKTKDPAARPPYIGSNPISDLWSEKAIEWVGTYLRRAYYNGADVEAKSHMAMAATF
                     AGIGFGNAGVHIPHALGYPIAGMVKGWVPPGYGTEEPMVPHGLSVALTAPANFRFTAP
                     TDPGRHARIAGLLGVNTVGLSEMEAARRLPDAFIELMRDIGAPNGLSAIGYAEADIPG
                     LVEGGWKQQRLLVGSPRPVTKADLTRIVEESMTLW"
     gene            complement(1453..2157)
                     /locus_tag="VK429_02375"
     CDS             complement(1453..2157)
                     /locus_tag="VK429_02375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014812389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN90689.1"
                     /translation="MILEMRDVHTFYGTSHVLFGVSLDVAQGETVCLMGRNGAGKTTT
                     FRSIVGLNPPRSGSILFHGKEIAGAKVHRIARLGVGYVPEDRQIFPNLTVRENLEIGR
                     SSGTTRKDGWSVEKVYALFPVLAKYDQKPGGQLSGGEQQMLTIGRTLMGNPDLVLLDE
                     PTEGLAPVVVIALKEMILRLKEMGTTILLSEQNVKFAVKVSDRVFIIDNGAIRYRNDI
                     EGFRSDEAVQKKYLAV"
     gene            complement(2154..2921)
                     /locus_tag="VK429_02380"
     CDS             complement(2154..2921)
                     /locus_tag="VK429_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014809847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN90690.1"
                     /translation="METRPPILEVRRLAKAFGGLKVTHDVSFGVRKGELSAIIGPNGA
                     GKTTLFNLITGKLVPDGGEVLYKGERIDGLHPADIARRGIGRAFQITSIFKERTALEN
                     VLVAVLAREGRTTRLMRRALSHAGEVGESMELLSMVALADRADTRAGSLPHGDQKRLD
                     IAVALALNPELVLLDEPMAGMSPEERSVTVELIRRIWKERSLTLVFIEHDMDVVFGIS
                     EWIRVLNQGGMLAEGTPAEISRNRDVITAYLGEEIVE"
     gene            complement(2896..>3867)
                     /locus_tag="VK429_02385"
     CDS             complement(2896..>3867)
                     /locus_tag="VK429_02385"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN90691.1"
                     /translation="AASGNAARGQLLQWAAVLLFFAFLPLAGRSFFITMANEVLIMGL
                     FAMAFNLLYGVTGMLSFGQAAYYGAGGYTVGLLLTKGVLPYSVALPLAPVVGAALALL
                     LGPLCIRLSGVYFTMLTLAFGELVWGVVFKWYGFTGGDNGIQGIPVPEWFHHPLHYYY
                     FTLAIVAAAVAALRRIVESPFGAVLQSIRENPERTAFLGIRVRRYQLAAMVLSGAFSG
                     LAGGLFAGFHRSIGPDMLHWTKSGEVILMSILGGVSSFFGPLVGAGVILFIEDMIGKY
                     TEFWEIWIGGIMLAIVVFFPRGVIGTLYQWTHRKGSRERDGNATAHP"
BASE COUNT          618 a         1375 c         1234 g          640 t
ORIGIN      
        1 acgcgaccgg cacgtgcgcg atcgtctcgc cggtgaactt gtcgatgacc ggcatcgact
       61 ccttctccga cacccacttc ccggcgacgt acagcttgaa attccgaacc ggagccttca
      121 tggggaactc tccttttcac gggggacttt ctaccaaagc gtcatggact cctcgacgat
      181 gcgggtcagg tcggccttcg tcaccggccg cgggctgccc accagaagcc gctgctgctt
      241 ccagccgccc tccaccaggc cggggatgtc ggcctccgcg tatcctatcg cggaaaggcc
      301 gttcggcgcg ccgatgtccc gcatcagctc gatgaacgcg tccgggagcc tgcgggccgc
      361 ctccatctcc gacaacccta ccgtgttcac cccgaggagg ccggcgatgc gggcgtgccg
      421 cccggggtcg gtgggggccg tgaagcggaa gttggccggc gccgtgagcg ccaccgacag
      481 cccgtgggga accatgggct cctctgtgcc gtaccccggc gggacccacc ccttcaccat
      541 ccccgcgatc gggtatccca gcgcgtgggg gatgtggacc ccggcgttcc cgaagccgat
      601 cccggcgaag gtcgccgcca tggccatatg gctcttggct tccacgtcgg cgccgttgta
      661 ataggcccgc cgcaggtacg tcccgaccca ttcgatcgcc ttctcgctcc acaggtcgga
      721 gatggggttg gagccgatat acggggggcg cgcggcgggg tccttcgtct tcgggcgcat
      781 gttgtacggc ttgatggtga acgactcggc cgcgtgggtc agcacgtcca ggcccgtgtt
      841 cgccgtcacc gccgccggcg ccgacaggga gttcagcggg tccacgaggg ccaccgtggg
      901 acggatgtgc tggtgggaga tgccggtctt gacatgcagg tccaggaaat ccatgacgat
      961 gacggtggtc gtctcgctgc cggtccccgc ggtcgtcgga agggcgatca acggcttcag
     1021 cggccccggt accggcgtcc ccttgccgat gggcgcgttc acgtattcca gcaggtccgc
     1081 gggccaggtg cggtacaggt tcaccgcctt ggccgtgtcc agcacgctgc cgccgcccag
     1141 cgcgacgacg gcgtcgaagt ccgcgccgcc cgccacatcg atcgcctgcc gcatcgaacg
     1201 gtccgtcggc tcgcagtgga tctcgtcgaa gattctcagg gcgatcttct ccccctcgat
     1261 gatccccttg accttgtcga ccatgccgtg gcctcgcagc cccctgtccg tcaccagcag
     1321 gacgctgcgc gctcccaggg ttctcaactc gtacccgagc tcctccgtcg ccccgacgcc
     1381 gaatttcagc ttccccatga tcagggggat gatcgtctcc atttccacgc ccaccgcgcg
     1441 cctccttgcc gcctatacgg ccaagtactt cttctggacc gcctcgtcgc ttcggaaccc
     1501 ctcgatgtcg ttccggtaac ggatcgcccc gttgtcgatg atgaacaccc ggtcggagac
     1561 cttcacggcg aacttcacgt tctgctcgga gaggaggatg gtggtcccca tctccttcag
     1621 gcggaggatc atctccttga gggcgatgac cacgacgggg gccagcccct ccgtcggctc
     1681 gtccagcagg accaggtcgg gattccccat gagcgttcgc ccgatcgtca gcatctgctg
     1741 ctccccgccg ctcaactgtc ctcccggttt ctggtcgtac ttcgcaagaa cggggaacag
     1801 ggcatacacc ttctccacgc tccacccgtc cttccgcgtg gtgccggacg accgcccgat
     1861 ctccaggttc tcccgcacgg tgaggttcgg gaagatctgc cggtcctcgg ggacgtaccc
     1921 gacaccaagg cgggcgatcc ggtggacctt cgcgccggcg atctccttcc catggaacag
     1981 gatgctcccg gagcgcgggg ggttcaggcc cacgatggac cggaacgtgg ttgtcttccc
     2041 ggcgccgttg cgccccatca ggcacaccgt ttccccttgc gcgacatcga gggagacccc
     2101 gaagaggacg tggctggtcc cgtagaaggt atggacgtcc cgcatctcca ggatcattcg
     2161 acgatctcct cgccgaggta cgccgtgatg acgtcgcggt tgcgggagat ctccgccggc
     2221 gtgccttccg ccagcatccc cccctggttc agcacccgga tccactccga gatcccgaag
     2281 accacgtcca tgtcgtgctc gatgaacacc agcgtgagcg acctctcctt ccagatcctg
     2341 cggatgagct ccaccgtgac ggaccgctcc tccggcgaca tgccggccat cggctcgtcc
     2401 aatagcacca gctccgggtt cagggcgagg gcgacggcga tgtcgagccg cttctggtcc
     2461 ccgtggggaa gcgacccggc gcgcgtgtcc gcccggtcgg ccagggcgac catcgacagc
     2521 agctccatcg actcccccac ttcgccggcg tgggacaggg cgcggcgcat caggcgcgtg
     2581 gtccggccct cccgcgcgag gacggcgacc agcacgtttt ccagggcggt gcgctccttg
     2641 aagatgctgg tgatctggaa cgccctgccg atcccccgcc gtgcgatgtc ggcggggtgg
     2701 agcccgtcga tccgctcccc cttgtacagc acttcccccc cgtcggggac gagcttcccc
     2761 gtgatcaggt tgaacagggt ggtcttcccc gccccgttgg ggccgatgat ggcgctgagc
     2821 tcccccttcc ggacgccgaa gcttacgtcg tgggtgacct tcaagccccc gaacgccttc
     2881 gcgaggcggc ggacctcaag gatgggcggt cgcgtttcca tccctctccc tgctcccctt
     2941 ccggtgcgtc cactggtaga gcgtcccgat gaccccccgg gggaagaaaa ccacgatcgc
     3001 cagcatgatc cccccgatcc agatctccca gaactcggtg tactttccga tcatatcctc
     3061 gatgaagagg atgaccccgg cccccaccag cgggccgaag aaggaggaga ccccgccgag
     3121 gatgctcatc aggatcacct cgcccgactt ggtccagtgc agcatgtccg ggccgatgga
     3181 gcggtggaag cccgcgaaca gcccccccgc cagccccgag aacgccccgg agagcaccat
     3241 ggccgccagc tggtaccggc ggacgcggat ccccaggaag gcggtccgct cggggttctc
     3301 ccggatcgac tgaaggaccg cgccgaaggg ggattccacg atcctccgga gggccgcgac
     3361 ggccgcggcg acgatcgcca gcgtgaagta gtagtagtgc agcgggtggt ggaaccactc
     3421 cggcacgggg atcccctgga tcccgttgtc ccccccggtg aagccgtacc acttgaagac
     3481 gacgccccag accagctccc cgaacgccag ggtgagcatc gtgaagtaga cgccggagag
     3541 ccggatgcac aggggaccca ggagcagcgc cagcgcggcg ccgacgaccg gggccagcgg
     3601 gagggcaacg gagtacggga ggaccccctt ggtgaggagc aggccgaccg tgtacccccc
     3661 cgcgccgtag tacgccgcct ggccgaagga gagcatcccc gtgacgccgt agagcaggtt
     3721 gaacgccatc gcgaacagcc ccatgatgag gacctcgttc gccatggtga tgaagaagga
     3781 tcggcccgcc agcgggagga aggcgaagaa gagcagcacc gcggcccact gcaggagctg
     3841 cccgcgggcg gcgtttccgg acgcggc
//
LOCUS       DATGYW010000177         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_10048, whole genome shotgun sequence.
ACCESSION   DATGYW010000177 DATGYW010000000
VERSION     DATGYW010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10048"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..337)
                     /locus_tag="VK429_02390"
     CDS             complement(<1..337)
                     /locus_tag="VK429_02390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90692.1"
                     /translation="MLVLERKEILRREGRIRLRERAESAVSAQAGDRAQEHFLREYPP
                     RAGRIAALYCALAGEVPTERIRRAYLAAGARLYYPRVTGRGTLAFYPHREGDGWETGP
                     YGIPEPSNMA"
     gene            complement(546..726)
                     /gene="ssrS"
                     /locus_tag="VK429_02395"
     ncRNA           complement(546..726)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="VK429_02395"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(746..1069)
                     /locus_tag="VK429_02400"
     CDS             complement(746..1069)
                     /locus_tag="VK429_02400"
                     /inference="COORDINATES: protein motif:HMM:NF017016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HLN90693.1"
                     /translation="MGNRIDVNIAGYALTVRTDRSEEHMARLAETLNGRVREIQKQGG
                     TANYLNVIMLAAMELADEVLMFEERFREVKQQVEALRREKEDIKARLDRKSRDLLATL
                     DDALK"
     gene            complement(1101..1358)
                     /gene="zapB"
                     /locus_tag="VK429_02405"
     CDS             complement(1101..1358)
                     /gene="zapB"
                     /locus_tag="VK429_02405"
                     /inference="COORDINATES: protein motif:HMM:NF017786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA];
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapB"
                     /protein_id="HLN90694.1"
                     /translation="MKSDYPRERTKMGEESFALIEKKITDLIQVVAALKKEKETLAGE
                     VARKDGEVKELTRKLAELSRERVDVKDRVDKILSRLDTIEL"
BASE COUNT          260 a          578 c          458 g          338 t
ORIGIN      
        1 ccgccatgtt cgacggctcg gggatcccgt acggccccgt ttcccacccg tccccttccc
       61 ggtgcgggta gaaggcgagg gttcctcgcc ccgtcacccg gggatagtag agccgggctc
      121 ccgccgcaag ataggcgcgc cggatgcgct cggtagggac ctcgccggcc agcgcgcagt
      181 acagggccgc gatcctcccc gcccgcggcg gatattcccg gagaaagtgt tcctgcgccc
      241 ggtcgccggc ctgcgccgaa accgcggact ccgcacgctc ccgaagccgg atacggcctt
      301 cccggcgaag gatctccttg cgctcaagga cgagcatcgg acgcctttca tcggaggtag
      361 acggggggcg aaaaccgcgg ggttgctgcg ctcgcgctgc ggaaacgttt cggcctgtga
      421 cgccgggtac ccttattcga acaaatattg ccgccgcatc gaaccgcgat aagaacgtcg
      481 ccgcaacaac ggttattgcc gccctgatct atgcaaacgg gcgatttccg cccgggtccc
      541 gctgaagtgc ccccgcgaat gccgtgtcgc cggtcgagtt gaacctggcg ttcaccaggt
      601 gggttcccgg ttgggccgct tcaggcttcc ccgtcacaag gggatgctca ccaccgcccg
      661 gaagggatcc cattctctac atgttggctc aaactctccc aacgatcacg cgcacggcag
      721 gggccccgac gaatttcccg ccagcctact tcaacgcatc gtcgagcgtc gcgaggaggt
      781 cccggctctt ccggtccagc cgggccttga tgtcttcctt ttccctccgc agcgcctcga
      841 cctgctgctt cacttcccgg aaccgctcct cgaacatcag gacctcgtcg gcaagttcca
      901 tcgccgcgag catgatgacg ttcaggtagt tcgcggtgcc gccctgcttc tggatctccc
      961 ggaccctacc gttcagcgtc tcggccaggc gcgccatgtg ctcctccgac cggtcggtcc
     1021 ggacggtcaa ggcgtacccg gcgatattga cgtcgatccg gttccccatc cttttccttt
     1081 cttattatac ctcctcgcct ctacaactca atggtgtcca gccgggagag gatcttgtcc
     1141 acccggtcct tcacatcgac gcgttcccgc gaaagttcgg ccagtttccg ggtcagttcc
     1201 ttcacctccc cgtccttgcg cgcgacctct cccgcgaggg tttccttctc ctttttcagc
     1261 gccgccacta cctggatcag gtcggtgatc ttcttctcga tcagcgcgaa cgactcttcg
     1321 cccatcttcg tcctctcccg tgggtagtca gacttcatta atgaaaccta tctcgtagaa
     1381 tatcccgtga accggccgga ttcaattgcg aatgcaaggc tagtgcttca attcataaat
     1441 acggcaacgt atccaaagag cgaccccggg aggcgctgcg cctgcaggac tcccccttcg
     1501 gctgcgtcgc cacggagggc ggggctccgt tcgtggctcg ccgtgcggtg aacctgcacg
     1561 gctgcgcttt acctcactgc gccccccgtt cttcctactg cgggggtacc ccagggacgc
     1621 atttcttacg ggag
//
LOCUS       DATGYW010000178         1800 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_10212, whole genome shotgun sequence.
ACCESSION   DATGYW010000178 DATGYW010000000
VERSION     DATGYW010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1800
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10212"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1688
                     /gene="lon"
                     /locus_tag="VK429_02410"
     CDS             <1..1688
                     /gene="lon"
                     /locus_tag="VK429_02410"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014260366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HLN90695.1"
                     /translation="KAIKQELGDIDGKSEEADDLKGKIEAAGMPEEVKKEAEKQFRRL
                     EGMHPDSAESSVVRTYLDWMVELPWKKETKDNIRIGKAKEILDEDHHDLEKVKERILE
                     YLSVRKLKDKMKGPILCFVGPPGVGKTSLGKSIARAMGRKFIRMSLGGIRDEAEIRGH
                     RRTYVGALPGRVIQGMKQAGTRNPVFMLDEIDKVGADFRGDPSAALLEVLDPEQNFAF
                     SDNYLNVPFDLSKVLFIATANIIDPVPPALKDRMEIIHLSGYTDVDKLAIAKKYLLPR
                     QFEENGIRRGKITMRDKAILAIIHEYTREAGLRNLEREIGQVCRKLARKIAEGEKGPF
                     AITPKSLAKYLGAPRNLPETEGEVDEVGVATGLAWTPTGGDILFVEVSLVDGKGGVMI
                     TGYLGDVMKESAQAAITYVRSRAAKLGLPRDFHAKHDVHIHVPSGGIPKDGPSAGITI
                     ATALVSSLTGIPVRRDVAMTGEITLRGRVLPIGGLKEKSLAALRAGINHVIAPARNGK
                     DLEEIPRHEARQVRFTLVKTMDEVLSLALTRDPFAKAKASKKPNRTPRAKGKR"
BASE COUNT          365 a          557 c          631 g          247 t
ORIGIN      
        1 tgaaggcgat caagcaggag ctgggggaca tcgacgggaa atccgaggag gccgacgacc
       61 tgaagggaaa gatcgaggcc gcggggatgc ccgaagaagt gaaaaaggag gcggagaagc
      121 agttccgccg cctggagggg atgcatcccg actcggccga gtcgtccgtc gtgcgcacct
      181 acctcgactg gatggtggag ctcccctgga agaaggagac caaggacaac atccgcatcg
      241 ggaaggcgaa ggagatcctc gacgaggacc accatgacct cgagaaggtc aaggaacgga
      301 tcctcgaata cctgtccgtg cgcaagctga aggacaagat gaaggggccg atcctctgct
      361 tcgtcggtcc cccgggtgta gggaagacgt ccctcggcaa gtcgatcgcc cgcgcgatgg
      421 ggcggaagtt catccggatg tccctgggag gcatccggga cgaggcggag atccgcggac
      481 accgccggac gtacgtgggg gcgcttcccg ggcgcgtcat ccaggggatg aagcaggcgg
      541 ggacgcgaaa cccggtcttc atgctggacg agatcgacaa ggtcggcgcc gatttccggg
      601 gcgacccgtc cgcggcgctg ctcgaggtgc tggaccccga gcagaacttc gcgttcagcg
      661 acaactacct gaacgtcccc ttcgatcttt cgaaggtcct gttcatcgcc acggcgaaca
      721 tcatcgaccc cgtcccgccg gccctcaagg accggatgga gatcatccac ctgtcgggat
      781 acaccgacgt cgacaagctg gcgatcgcga agaaatacct tctgccgcgc cagttcgagg
      841 agaacgggat ccggcgggga aagatcacga tgagggacaa ggcgatcctc gccatcatcc
      901 acgagtacac gcgggaggcg gggctgcgaa acctcgagcg ggagatcggc caggtgtgcc
      961 ggaagctggc ccggaagatc gccgaggggg agaaggggcc cttcgccatt acgccgaaga
     1021 gcctcgcgaa gtacctcggc gccccgcgga accttccgga aacggagggg gaggtcgacg
     1081 aggtcggcgt cgcgacgggc ctcgcctgga cgccgacggg gggagacatc ctcttcgtcg
     1141 aggtgtccct cgtcgacggg aagggcggcg tgatgatcac cgggtacctc ggcgacgtga
     1201 tgaaggagag cgcccaggcg gcgatcacct acgtccgttc gcgcgcggcg aagctcggtc
     1261 tgccgcggga tttccacgcg aagcacgacg tccacatcca tgtcccgtcg ggggggattc
     1321 cgaaggacgg tccttccgcc gggatcacga tcgcaacggc cctggtctcc tcgctcaccg
     1381 ggatccccgt ccgcagggac gtggcgatga ccggcgagat cactctccgc ggccgcgtcc
     1441 taccgatcgg cggcctgaag gagaaatcgc tggcggcgct tcgcgccggg atcaaccacg
     1501 tgatcgcccc ggcccggaac gggaaggacc tcgaggagat ccctcgccac gaggcccggc
     1561 aggtgcgctt cacgctggtg aagaccatgg acgaggtgct ctccctggcc ctgacgaggg
     1621 acccgttcgc caaggcgaag gcgtcgaaga aaccgaatcg gactcctcgc gcgaaaggga
     1681 agcgatgatc cggggcgaca ggggcaaacc tcacggaacc aggcccgcgc cccgtggaac
     1741 ccttctgcgg gacgtgggcg aatccggcct gatcgaactc ctccggcgga agcatggcgg
//
LOCUS       DATGYW010000179         1605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_71948, whole genome shotgun sequence.
ACCESSION   DATGYW010000179 DATGYW010000000
VERSION     DATGYW010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71948"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..307)
                     /gene="tsaB"
                     /locus_tag="VK429_02415"
     CDS             complement(<1..307)
                     /gene="tsaB"
                     /locus_tag="VK429_02415"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HLN90696.1"
                     /translation="MILALETATPRGSVALVSGGAVRAEVFLPPGPRASGSYIAAVEA
                     LFASTGAATGDVSAVAVSAGPGAFTGLRVGMSAAKGFCFGWGVPLVPVPTILALAVRF
                     "
     gene            complement(312..1397)
                     /gene="rseP"
                     /locus_tag="VK429_02420"
     CDS             complement(312..1397)
                     /gene="rseP"
                     /locus_tag="VK429_02420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015745002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HLN90697.1"
                     /translation="MNPILQFVYVIVPFIVVLGVLIFVHEFGHFIVARKLGVGVTKFS
                     FGFGPKLAGFRRGETEYLLSAVPLGGYVKLIGENEGEEVPPELSARSFQGKPVWVKMA
                     IVAAGPLGNLVFAVLVFWVVFLGGVPSLTTRIGDIAPDTPASRAGLLKGDLVLRIDGV
                     TVATWEELAAKIRTGSSGKPLRITVKRDGSETTIPVAPEMREGRTVFGEKVSEPKIGI
                     VAGQEVVYRSIGPGAAFVHAGHETGKLIYLTVMTVVKLVTRVLPSETLGGPILIAQIA
                     GDQARQGISPFAYFLGLLSVNLGILNLLPIPILDGGHLLFFSVEGLLRKPISPQVRTL
                     AHQVGLALILTLTALVFYNDIARLLSR"
     gene            complement(1394..>1605)
                     /locus_tag="VK429_02425"
     CDS             complement(1394..>1605)
                     /locus_tag="VK429_02425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006557441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HLN90698.1"
                     /translation="LSGANEEAVRAFLSGQIAFTDIVRVVERVLSAWAAPFTARTLQE
                     VLAADAQARREAQNELYRHRRRRPS"
BASE COUNT          294 a          548 c          547 g          216 t
ORIGIN      
        1 gaaatcgaac cgcgagggcg agaatggtcg gcacggggac gagcggcacg ccccacccga
       61 aacagaaccc cttcgccgcc gacatgccca cgcgcaagcc ggtaaacgcc ccgggcccgg
      121 ccgaaactgc gacggccgag acgtccccgg tcgccgcccc agtggaggcg aagagcgctt
      181 ccacggcggc gatgtacgac ccggacgccc gcgggcccgg ggggagaaag acctcggccc
      241 gcaccgcgcc gccggacacc agcgccacgc tgccgcgggg cgtcgccgtc tcgagcgcga
      301 ggatcaccgg gtcaacggga caggagccgg gcgatgtcgt tgtagaagac gagcgccgtc
      361 agggtgagga tgagcgcgag ccccacctgg tgggccagcg tgcgcacctg cggggagatc
      421 ggcttgcgca acagaccctc gaccgagaag aagagcaggt gcccgccgtc gaggatcggg
      481 atcggaagca ggttgaggat tccgaggttg acgctcagca ggccgaggaa gtaggcgaag
      541 ggggagatcc cctgacgggc ctggtccccc gcgatctgcg cgatgaggat cggccccccc
      601 agcgtctccg acgggagaac gcgcgtgacg agcttcacta ccgtcatcac ggtgaggtag
      661 atgagcttcc cggtctcgtg gcccgcgtgg acgaaggccg cccccggccc gatactgcga
      721 tagaccacct cctggcccgc gacgatcccg atcttcggtt cggagacctt ctccccgaag
      781 acggtgcgcc cctcccgcat ctcgggggcc acggggatcg tcgtttccga cccgtcgcgt
      841 ttcaccgtga tccgaagcgg ctttcccgag ctccccgtcc ggatcttcgc cgcgagttcc
      901 tcccatgtgg ccacggtcac gccgtcgatc cggagcacaa ggtccccctt caggagcccc
      961 gcgcgggacg ccggcgtgtc gggcgcgatg tcgccgatgc gcgtggtcag cgacgggacg
     1021 ccgccgagaa agacgaccca gaaaacgagg acggcgaaga cgaggttccc gagaggtccg
     1081 gccgcgacga tcgccatctt cacccagacc ggtttcccct ggaaggagcg cgccgacagc
     1141 tccggcggga cctcctcccc ctcgttctcc ccgatgagct ttacgtagcc gccgagggga
     1201 accgcggaga gcaggtactc ggtctctccg cgccggaagc cggccagttt cggaccgaac
     1261 ccgaacgaga acttcgtgac cccgaccccg agtttccggg cgacgatgaa gtggccgaac
     1321 tcgtggacga agataagtac gccgaggacg acgatgaacg ggacgatgac gtaaacgaat
     1381 tgaaggatgg gattcacgat ggtcgtcgtc tcctgtgacg gtatagttcg ttttgcgcct
     1441 cgcggcgggc ctgcgcgtcg gcggcgagca cttcctgaag cgttcgggcc gtgaacggcg
     1501 ccgcccacgc cgacagaacc cgctcgacga cgcggacgat atcggtgaag gcgatctgcc
     1561 cggacaggaa cgcccggacc gcctcctcgt tggcgccgct caaga
//
LOCUS       DATGYW010000180         1555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_71993, whole genome shotgun sequence.
ACCESSION   DATGYW010000180 DATGYW010000000
VERSION     DATGYW010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71993"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1555)
                     /locus_tag="VK429_02430"
     CDS             complement(<1..>1555)
                     /locus_tag="VK429_02430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012526294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HLN90699.1"
                     /translation="GRRGRPVTGPGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRS
                     VIVVGPELRLHQCGLPKQMALELFKPFVMKRLVDQALAQNIKSAKRMVERARPQVWDV
                     LEEVIREHPVLLNRAPTLHRLGIQAFEPVLVEGKAIKIHPLVCAAFNADFDGDQMAVH
                     VPLSMEAQMEARVLMMSTNNILSPAHGKPVIGPSQDIVLGIYYLTRQRDGQTGEGKKF
                     SAPDEVRIAYDGGAVGLQAAIRVRIDGKMVDTTTGRVLLYEVVPKEVPFEYVNKVMKK
                     KDLAELIDITYRNCGQKATVILADQLKNTGFQFATISGISICIDDMVIPSSKKAILDR
                     ASVSLEKVISEHVEGLITPGERYNKVVDIWSAATERVAKEMIKEMGTETVKGKDGKEK
                     KVISFNPIYMMADSGARGSDKQMMQLAGMRGLMAKPSGEIIETPIRSNFREGLSVGEY
                     FISTHGARKGLADTALKTANSGYLTRRLVDVAQDCIVVEEDCKTLDGIGVRALIEGGE
                     IIDRLSDRIL"
BASE COUNT          237 a          529 c          473 g          316 t
ORIGIN      
        1 ccaggatcct gtccgaaagg cggtcgatga tctccccgcc ttcgatcaat gctcgcaccc
       61 cgatcccgtc aagggtcttg caatcctcct cgacgacgat gcagtcctgc gccacgtcga
      121 ccagcctgcg ggtcaggtac ccggagttcg ccgtcttcag cgctgtgtcc gccaacccct
      181 tccgggcgcc gtgggtcgag atgaagtatt cgcccacgga cagtccctcg cggaagttcg
      241 accggatggg cgtctcgatg atctcgccgg acggcttggc catgaggccg cgcatgccgg
      301 ccagctgcat catctgcttg tcggatccgc gggctccgga gtcggccatc atgtagatcg
      361 gattgaagct gatgactttt ttctccttgc cgtccttccc cttgacggtc tcggtcccca
      421 tctccttgat catctccttg gcgacccgtt ccgtcgccgc cgaccagatg tcgacgacct
      481 tgttgtaccg ctctccggga gtgatcaggc cctcgacgtg ctcgctgata accttctcga
      541 ggctgaccga cgcgcggtcg aggatcgcct tcttgctgga cggtatgacc atgtcgtcga
      601 tgcagatcga gatcccggag atcgtcgcga actggaaccc cgtgttcttc agctggtccg
      661 ccaggatgac cgtggccttc tggccgcagt tccggtacgt gatgtcgatc agctcggcga
      721 gatctttctt cttcatcacc ttgttgacgt attcgaaggg aacctctttc gggacgacct
      781 cgtagagcag cacccgcccg gtggtcgtgt cgaccatctt gccgtcgatg cgcacccgga
      841 tcgccgcctg gagcccgacc gcgccgccgt cgtaggcgat cctcacctcg tcgggggcgg
      901 agaacttctt cccctccccc gtctgtccgt cgcgctgccg cgtgaggtag tagatcccca
      961 gcacgatgtc ctgggaaggc ccgatgacgg gcttcccatg ggccggggag aggatgttgt
     1021 tggtcgacat catcaggact cgtgcctcca tctgcgcttc catggagagc ggaacgtgga
     1081 ccgccatctg gtccccgtcg aagtcggcgt tgaacgccgc acacacgagc gggtggatct
     1141 tgatcgcctt gccctccacc aggaccggct cgaaggcctg gatcccgaga cggtgcaggg
     1201 tcggggcccg gttcaggagc accgggtgct cgcggatgac ctcttcgagc acgtcccaca
     1261 cctgcggacg cgcgcgctcg accatgcgct tggcgctctt gatgttctgc gccagggcct
     1321 gatcgaccag ccgcttcatc acgaacggct tgaacagctc gagcgccatc tgcttgggca
     1381 gtccgcactg gtgcaggcgg agctccggcc cgaccacgat gaccgagcgg cccgagtagt
     1441 ccacgcgctt gccgagcagg ttctgacgga accggccctg cttgcccttc aacatgtcgg
     1501 agagcgactt gagcgcccgg ttaccggggc ccgtcaccgg acgcccgcgg cggcc
//
LOCUS       DATGYW010000181         6184 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_335495, whole genome shotgun sequence.
ACCESSION   DATGYW010000181 DATGYW010000000
VERSION     DATGYW010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 6184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6184
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335495"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            265..534
                     /locus_tag="VK429_02435"
     CDS             265..534
                     /locus_tag="VK429_02435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90700.1"
                     /translation="MDRYFVESPHTPQECLRALDEILTKGPGVLAKYEWGCMAGDHTG
                     YAIVEARSESEAKETIPSFLGGKARVVKLNKFTPEQIRDFHRKSA"
     gene            complement(827..1831)
                     /locus_tag="VK429_02440"
     CDS             complement(827..1831)
                     /locus_tag="VK429_02440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020470337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HLN90701.1"
                     /translation="MTKLRDRRRISRVTVEKLLDEMHRSVDGLGEDGASRADLKLLSR
                     TLKELRHAFRFFDGLRGRPKVTVFGSARLPEGSPAYRQAESFGKAMARSGWFVVTGAG
                     EGIMEAAHIGAGREHSIGVNILLPFEQPGNTVMEGNPHLIQTKYFFTRKLLFLKESSG
                     VALFPGGFGTMDEAFEVLTLLQTGKTHPFPVVLVDEPGGTYWATWRRFLVDNLLETGM
                     ISAEDFSLFRITSSVEEAVREIQGFYRVFHSMRYAGRCLVIRIREPIAPDALAALNRD
                     FPDLLAEGLFFQEKALPEEADEPEIADLPRIVFRFNSGSHGRLRQLIDQLNGQADYDH
                     "
     gene            complement(1905..2411)
                     /locus_tag="VK429_02445"
     CDS             complement(1905..2411)
                     /locus_tag="VK429_02445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014808524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLN90702.1"
                     /translation="MKAGRKLTVAVKPVPEGYHSITPFLTVRGADRAIDFYRRAFGAK
                     EIGRMNFPDGKTVMHAELQIGDSRFFLGDEVPGMDCRSPETLGGSPAGIYLYVRDVDE
                     AFRKAVDAGATVKRPLEDMFWGDRTGSVVDPFGHTWDLATHREDVPPQEMKRRGEEFI
                     EKLKGGKS"
     gene            complement(2677..3246)
                     /locus_tag="VK429_02450"
     CDS             complement(2677..3246)
                     /locus_tag="VK429_02450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90703.1"
                     /translation="MTGEKSGAACTFCGQPITGESPERPDPCVYCSSLSGGYPHLVNL
                     TETIAGSAVGYIEGATYPQILLSIARFLLARNEDKLCGLATIVAHLACEVAIERSLSD
                     SFARKGIQSFEVAVANILNGYNLANDMVRNLYTSVTGDEIQEQPFWGNFVRSAKRRDN
                     IIRKGLIVGRTDAEETIKAASDFLAHLTE"
     gene            3539..4126
                     /gene="folE"
                     /locus_tag="VK429_02455"
     CDS             3539..4126
                     /gene="folE"
                     /locus_tag="VK429_02455"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: protein motif:HMM:NF006826.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I"
                     /protein_id="HLN90704.1"
                     /translation="MRQFEGYMREILSAFGMDPDTPATLDTPRRFLRAMFDSTDGYEG
                     DPKLITVFDTECRGGPDCRLSQVVEGPIQFFSLCEHHALPFYGRAYVGYIAHEQIIGL
                     SKLTRLVRLFSKRFTVQERIGQQIADSLEAMLHPHGVAVYLDAHHLCTQMRGVRETAP
                     LTRTTFWRGNYESDSSLRTEFFVACGLHRFEPGSR"
     gene            4142..4990
                     /locus_tag="VK429_02460"
     CDS             4142..4990
                     /locus_tag="VK429_02460"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HLN90705.1"
                     /translation="MTPLLPLETLLDVVRGEDFPLPAELTVLYGSLRFPAHEDRPYII
                     GNFVTTLDGVASLSAPGLSGGGPISGSNPHDQMVMGLLRAVADAVIVGAGTLRSVPNH
                     LWTAEYVYPTLSGLFRQVRIASGKEASPLNVIVTARGDIDLSLPVFHSGAVKVLVVTN
                     PEGARRIRGGNLPSSVVIGEVEEGGAISARAILSAVGRFLRGEIFLVEGGPRLMGDFF
                     TEKCLDELFLTLAPQVAGRDGSIERPGFVAGKRFAPEHPLWGTLTGVKRAGSHLFLRY
                     SFATKD"
     gene            complement(5268..>6184)
                     /locus_tag="VK429_02465"
     CDS             complement(5268..>6184)
                     /locus_tag="VK429_02465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90706.1"
                     /translation="LVGRGSVASEFQTHAKKVNAWGGWSEGLKDRWVKRFTFGITQDE
                     SRFAPVPGNVPTDPVPPDRILVYPWVGFELIEDAFEKAKNRDQIERTEDFSLGTHFSA
                     SLGYSSNIFGADREAVVLSGQFGKGFKAMESLTLLVDSAANGRLESGSVRDTTLKASG
                     TLYLRLPKRLLLFSMLSGNMGINLDQDHELVLGGENGLRGYPSNYQAGDRSVLFTLEG
                     RYFSPLYIFRLVRVGGAVFYDMGRAWGEDFVNAQDAGILRDVGFGLRFAMTRSGLGNV
                     IHLDMAFPLDGDPAISRVQYLVTTKQSF"
BASE COUNT         1223 a         1863 c         1751 g         1347 t
ORIGIN      
        1 ggaggcgttc tggatttccg tggggccctg attaagaggg aaagccagcc ggggtcaccg
       61 tgatatgcgg tgaccctttc tatttacaat tacttgacag taccgcgttc atccgcctgc
      121 agcatcatga tgttcgttaa ggggtgtgtc tggtaaaaaa aacgcgccgg tgggatccat
      181 tcatgccggg aatatatctt attaaataag gcgacccggt ggcccgtcaa ccttccgaat
      241 gacagcgaca gaaaggagga gaacatggat agatatttcg ttgaatcacc ccacactccc
      301 caggagtgcc tccgtgccct cgatgaaatc ctgacgaaag gcccgggagt ccttgccaaa
      361 tacgagtggg ggtgcatggc cggcgaccac accggctatg cgatcgtcga ggcccggagc
      421 gagtccgagg caaaggaaac catcccctca tttctgggag ggaaggcgcg tgtcgtcaag
      481 ttgaacaaat tcacaccgga acagattcgg gatttccaca ggaaatcggc ctgagaaacc
      541 atgaaggaag gggagagatg cgctcccctt ctccttgttc cggggaaaac ctgtctatgg
      601 caacaaggaa aggagtaaat aaataatgcg attcatgatg gtgatgattc cgcggaagag
      661 gcagtcggat gggccaaaca ctgtcccgcc gcggacggag atgtgatcga ggttcgccaa
      721 gttttcgagt cagcggactt ccctcaagat gtccggaacg cagcggtatc gtttccttag
      781 ttactgtctg ttccacgccg cccctcgaca tttgcatcgg tttcggtcag tgatcatagt
      841 cggcctgtcc attgagttgg tcgatcaact ggcgaagccg gccatggctg ccgctattga
      901 accggaaaac gatccggggc agatcggcta tctccggctc gtcagcctcc tcggggagag
      961 ctttctcctg gaagaacaac ccttccgcga ggagatccgg aaaatccctg ttcagcgcgg
     1021 cgagcgcgtc tggtgcgatg ggctcccgga tacggatcac caggcacctt cccgcgtatc
     1081 gcatgctgtg gaacacccga taaaagcctt ggatctcccg tacggcttcc tccacactcg
     1141 aagtgatccg gaacagggaa aaatcctcgg cagagatcat tcccgtttcc agcaagttgt
     1201 ccacgaggaa ccggcgccat gtcgcccagt aggtcccccc gggctcgtcc acaagcacga
     1261 cgggaaaagg gtgggtcttc cccgtttgga gaagggtcaa cacctcgaac gcctcgtcca
     1321 ttgtcccgaa tcctcctgga aagagggcaa cgccgctcga ctccttgaga aaaagcagct
     1381 tcctggtgaa gaaatatttc gtttggatga gatgcgggtt cccttccatc accgtgttcc
     1441 cgggctgctc gaacgggagc aggatgttca ccccgatcga atgctcccgc ccggctccga
     1501 tgtgggccgc ctccatgatc ccctcgccgg ccccggtaac gacgaaccac cccgatcgcg
     1561 ccatcgcctt gccgaacgat tccgcctgcc ggtacgccgg ggaaccctcg ggcagacgcg
     1621 ccgacccgaa caccgtcacc ttggggcgtc cccggagccc gtcgaagaac cggaaggcgt
     1681 ggcgaagttc cttcaaggtg cgtgagagga gcttcaggtc cgcccggctt gccccgtctt
     1741 cccctaaccc gtcgacgctc ctgtgcatct cgtcgaggag tttctctacg gtcacccggg
     1801 atattcttcg cctgtcgcgg agcttcgtca tgcgcctctc cggttcttct cggttcgctg
     1861 gctaaggcac agctgcgaaa gatacgtgtg gggcgccccc cttttcagga ttttccgccc
     1921 ttgagtttct cgataaattc ctcaccccgc cgtttcatct cctgcggcgg aacgtcttcc
     1981 cggtgcgttg ccaggtccca ggtgtgcccg aacgggtcaa cgacgcttcc ggtcctgtcg
     2041 ccccagaaca tgtcctccag gggccgtttc acggtagcac ccgcgtccac cgccttgcgg
     2101 aacgcctcgt ccacgtcccg aacatagaga tatatcccgg cgggcgagcc accgagcgtc
     2161 tccggagagc ggcaatccat cccggggacc tcgtcgccaa ggaagaaccg ggagtccccg
     2221 atctgtagtt ccgcgtgcat cacggtcttg ccgtccggaa aattcatccg tccaatctct
     2281 ttggcgccga aggcccgtcg gtagaaatcg atggcgcgat cggctccccg caccgtcaga
     2341 aacggggtga tcgaatggta cccttccgga accggcttta cagccacggt cagcttcctg
     2401 cctgccttca tcaccaattc tcctttcctt ttccttcccg gcacgaatcc cgccgggttg
     2461 gctcccgctc cggaccggga ttcgtccgta gtcgtaacgg gacagtccgg ttaattccgt
     2521 ccgccgacct tgccatttcc tgttttgatg aaccggaaac gtctccggtt gcctgctccg
     2581 caggatccgg gagaagggtc tgcgccaacg cctggcgtcc ccgggtcgga caaacgacgc
     2641 tgtaatccgc tggagaccga ttattctttc cgcgctttat tcggtcaggt gagcaagaaa
     2701 atcgcttgcc gccttgatgg tttcttccgc atctgtcctg ccgacgatca accccttgcg
     2761 gatgatgtta tcccgacgtt tcgcggaccg aacgaagttg ccccagaacg gttgttcctg
     2821 tatttcatcg cccgtcacgg atgtatataa atttcggacc atatcgttgg cgaggttgta
     2881 cccgttcaga atattggcca cggcaacttc gaacgactgg atccccttcc gggcgaagga
     2941 gtcggacaag gatcgttcga tcgcgacctc gcatgccaag tgcgccacga tcgtcgcgag
     3001 gccgcacagt ttgtcctcgt ttctagcgag gagaaacctt gcgatactca atagtatctg
     3061 aggatatgtg gccccctcga tataacccac cgcagacccg gcgatcgtct ctgtcaagtt
     3121 gaccaggtgc gggtaccctc cagacaggga actgcaatat acacacggat cgggtcgttc
     3181 gggagattct ccggtgatcg gttgaccgca aaaagtgcag gcggcaccgc ttttttcgcc
     3241 ggtcatggat ctattcctcg gggcacccct tgtgaaatgg aaccgcccat tgacttcccc
     3301 tccgcgggaa tctcctgcga gactccttcc cgcttttttt gatgccggga atggggatat
     3361 cgtttgcatc tcctcccgaa ccataatggt taaacaatgc cgatattctt taccggaggg
     3421 cggtaatata ggtttaccat tgctcccagg aggaccgatg agtccggacc atgagcatga
     3481 aacccgggga aatacatcga atatgagcgc aaacagccgt cctgtttcgg cggaacggat
     3541 gcggcagttc gaaggctaca tgagggaaat cctctcggcc ttcgggatgg atccggacac
     3601 gccggccacg cttgacaccc cgcgacgctt tctccgggcc atgttcgaca gcaccgacgg
     3661 atacgaaggc gacccgaaac tgatcacggt gttcgatacc gagtgccgtg gagggccgga
     3721 ctgccggctc agccaggtag ttgaaggacc gattcagttc ttcagcctct gcgagcacca
     3781 cgcgcttcct ttttatggcc gcgcctacgt tgggtacatc gcccacgagc agattatcgg
     3841 cctctctaag ctcacgcggc tggtgcgcct gttctcaaaa cggtttaccg tgcaggagcg
     3901 gatcggccag cagattgcgg actccctgga agctatgctc catccgcacg gcgttgccgt
     3961 gtacctggac gcacaccacc tctgcaccca gatgcgtggg gttcgtgaaa ccgcgccgct
     4021 tacgcgcacg acgttctggc gtggaaatta cgagagcgac tcatccctgc ggaccgaatt
     4081 tttcgtcgca tgcggcctgc atcgtttcga gcctggctcc cggtaggata cagggcgtgc
     4141 gatgactccc ctgctaccac tggaaaccct cctcgatgtg gtccgtgggg aggatttccc
     4201 tctgccggcc gaacttacgg tgctctatgg ttccctccga ttcccagcgc acgaggacag
     4261 gccgtacatc attggtaact ttgtcaccac tttggacggc gttgcatccc tttccgcccc
     4321 cggtttatcg ggagggggcc ccataagcgg ttccaacccg cacgaccaga tggtcatggg
     4381 acttttgcga gctgtcgcag atgccgtgat cgtcggcgcc gggacgcttc ggtccgttcc
     4441 gaatcacctc tggaccgcag agtatgttta cccgactcta tccggcttgt tccggcaggt
     4501 gaggatcgca tcggggaagg aggcctcccc gttgaacgtc atcgtcaccg cgcgtggtga
     4561 tatcgacctg agccttcccg tcttccattc cggggcagta aaggtgctgg tcgttacgaa
     4621 ccctgagggc gcccgacgaa ttcgcggtgg caatcttcct tcttctgtcg tcatcgggga
     4681 agtggaggag ggtggcgcga tcagcgcgcg ggcgattctt tccgcagtcg gtcgattcct
     4741 ccgaggtgaa atcttccttg tcgaaggcgg accgcggttg atgggagatt ttttcaccga
     4801 gaaatgcctt gatgagcttt ttttgacact cgctccacag gttgccggtc gggacggttc
     4861 catcgagcgt cccggattcg tcgcggggaa acggtttgcc ccggagcatc ccttgtgggg
     4921 aacgcttacc ggcgtgaaac gtgccggcag tcacctgttt ttaaggtatt ccttcgcgac
     4981 gaaagattga tttccggttg gtacggggga acagggatgc tacccggccc ctgttgacgg
     5041 ggggaacccc ttcatgattg cagtgggaat tgggagcaat ttaatttaat ttttccggtt
     5101 tatttgaaat tgatgacagg atttccgtct gttcagcaag aagacgccgt ggcggaactt
     5161 ctccattgat tcggtttcgg ttattgggga gtggaccact ttgaaggggg aaaccctgtg
     5221 ctgttggatt gggttatgga ggacagggca ccaagatggc acccctgtca gaagctctgc
     5281 ttcgtcgtaa cgaggtactg cacccggctg atcgccggat cgccgtccaa gggaaacgcc
     5341 atgtcaaggt gtataacgtt tcccaatccc gaccgggtca tcgcgaaccg gaggccgaaa
     5401 ccgacatccc gcaagatgcc agcgtcctgt gcattcacaa agtcctctcc ccaggccctc
     5461 cccatgtcgt agaagacggc tcctccgacg cggaccaacc ggaagatata caggggcgag
     5521 aagtatcgcc cctccagcgt gaaaaggacg cttctgtccc cggcctgata attgctcgga
     5581 tatccgcgca acccgttttc cccaccgagc accaactcat ggtcctggtc gaggtttatt
     5641 cccatgttgc cggacagcat ggagaagagg agcaaccttt tcggcaggcg caagtacagg
     5701 gtgccgctgg ccttcagggt cgtgtcccga accgacccgc tctcgagccg tccattggcg
     5761 gcgctatcca cgagcagcgt caaggattcc atggccttga aacctttccc gaactggccg
     5821 cttaagacga ccgcctcgcg gtcggcgccg aaaatgttac tcgagtaacc cagcgacgcg
     5881 ctaaagtggg tccccaggga aaaatcctcg gtcctctcga tctggtcgcg gtttttggcc
     5941 ttctcgaaag catcttctat gagttcaaag ccgacccaag ggtacaccag gatccgatcg
     6001 ggcgggacgg ggtccgtggg gacgtttccc ggcacgggcg caaaccgcga ttcatcctgg
     6061 gtgatcccga acgtgaagcg cttgacccat cggtctttca gaccttctga ccaacctccc
     6121 cacgcattca ctttttttgc atgcgtctgg aactcgctgg caacgctccc gcgcccgacg
     6181 agag
//
LOCUS       DATGYW010000182         2246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_284651, whole genome shotgun sequence.
ACCESSION   DATGYW010000182 DATGYW010000000
VERSION     DATGYW010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284651"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..349
                     /locus_tag="VK429_02470"
     CDS             <1..349
                     /locus_tag="VK429_02470"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HLN90707.1"
                     /translation="PGREQAVHTVAPGEITVDLHAESFAFSPARLIVPAGKPLVLRVQ
                     NEATLIPHSFVLEKEGGGIIVRQELKKGGETVLRIPPLSAGMYNFYCDKSYMGISHRS
                     KGMEGVIEATIVK"
     gene            511..1668
                     /locus_tag="VK429_02475"
     CDS             511..1668
                     /locus_tag="VK429_02475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012694324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III polyketide synthase"
                     /protein_id="HLN90708.1"
                     /translation="MPAWIHRIETSLPDFSFSQEEAMVKMQEWARDDRERRLVRAVYR
                     NSGIDRRHSVLRNFDGQGGEDAFFLRAQDGTFKGPGTAARNDIFAVESRAISVALARK
                     IIGNCPGIGPEDVTHVVTVSCTGFYNPGPDYYIVRELGLSDATQRYHLGFMGCYAAFP
                     ALRMASQFCEADPRAVVLVMCLELCTIHMQLTGTEDSLLANSLFADGAGAAIVSGREP
                     TPGNSSCRIEGFRSALIPSGEQEMTWRIGDQGFDIVLSSYVPKLIGANIQATVLPALA
                     AVGLSPEDIDTWAVHPGGKAIIDQVQKSLGLSPERVRASREILRSCGNMSSASILFVL
                     EEILRNPSEKVPERICAIAFGPGLTVELATLAAVPAASGAGVASVPAVWHL"
     gene            1668..>2246
                     /locus_tag="VK429_02480"
     CDS             1668..>2246
                     /locus_tag="VK429_02480"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLN90709.1"
                     /translation="MSGRFPLKAKDHLGTPEQKRVYNELHFAEAAPRYDLATRAISLG
                     RDPAWKRDLLAFLPGKASPYCLDLACGTGDVAFLLAERYPRGTVVALDISTPMLDIAR
                     GRNHYGNIRFERGDLCALPLPDGVADIVTGSYALRNAPELRTALAEVRRVLKPGGIAA
                     ILDFSKPADPFLQKFQYILLRGWCGLWGLLLHG"
BASE COUNT          420 a          716 c          679 g          431 t
ORIGIN      
        1 accgggtcgg gagcaggctg tacacaccgt cgcacccggt gaaataacgg tcgatctgca
       61 cgcggaaagc ttcgccttct cccccgcccg tcttatcgtt ccggcgggga agccattggt
      121 cctccgggta cagaacgaag ccaccctcat cccccactct ttcgttcttg aaaaggaagg
      181 tggcggaatc atcgtccgcc aggaacttaa aaaaggaggg gaaaccgttc tccgcatccc
      241 cccgctatcc gctggaatgt acaacttcta ctgcgacaag tcgtacatgg gcatatcgca
      301 caggagcaag ggcatggagg gagtgatcga agcgacgatc gtgaagtagc atgtgtttcc
      361 agcaagacac cgctgcgcgt agcgggctat actcctgctg ctgtcggcgc catgtttccc
      421 gggggtcgga tcaccatcga gggattattc acccgggaag tcaccagatc cgcacgcagc
      481 gcatcctaaa gaaaagggtg gaggtatctc gtgcccgcat ggatccatcg gatcgagaca
      541 tcgcttcccg acttctcctt ctcgcaggag gaggcgatgg tgaagatgca ggaatgggcg
      601 agggacgacc gggaacgccg ccttgtccgg gccgtctacc ggaactccgg aatcgatcgg
      661 aggcactctg tcctgcggaa tttcgatgga cagggggggg aggacgcctt tttccttcgg
      721 gctcaagacg ggaccttcaa ggggcccggg accgcagccc ggaacgacat cttcgccgtc
      781 gaatcccgcg ccatctccgt cgcgctcgcc cggaaaatca tcgggaactg ccccggcatc
      841 ggaccggagg atgtgacaca cgtcgtcacc gtctcctgca caggcttcta caaccccggg
      901 ccggattatt acatcgtgcg ggaactgggt ctttcggatg ccacccagcg ataccacctc
      961 gggttcatgg gatgctacgc cgccttcccc gcattgcgga tggcatccca attctgcgag
     1021 gccgacccgc gcgccgtggt gctggtgatg tgcctggaat tgtgcaccat ccacatgcaa
     1081 ttgaccggca cggaggacag cctgctggcg aactcgctct tcgccgacgg cgcgggagca
     1141 gcaatcgttt ccgggcggga gcctacccct gggaattcct catgccgcat cgaggggttt
     1201 cgctcggcac tcatacccag cggcgagcag gaaatgacgt ggcgtatcgg cgaccagggt
     1261 ttcgatatcg tcctctcaag ctacgtaccg aaactgatcg gggcgaatat ccaggccacg
     1321 gttctccccg ccctcgccgc cgtcggtctg tcgcccgagg acatcgatac ctgggcggtc
     1381 catccgggcg gcaaagcgat catcgatcag gtgcaaaaga gcctggggct ttcgccggag
     1441 cgggtccgcg cctcccgcga gatcctccga agctgcggta acatgagcag cgcctccatt
     1501 ctgttcgtcc tcgaggaaat cctccggaat ccttccgaaa aggtgccgga gcgtatctgt
     1561 gctattgcgt tcgggcccgg gttgaccgtt gaattggcga ccctggcggc tgttcccgct
     1621 gcttccggag ccggggtcgc ttccgtgccg gcagtttggc acctgtgatg agcggtcggt
     1681 ttcccttgaa ggccaaggac caccttggaa cccccgaaca aaaacgcgtc tacaatgaac
     1741 tccactttgc cgaagctgca ccacggtatg accttgccac cagggcgata tcgctggggc
     1801 gcgatccggc gtggaaaagg gacctgctcg ctttccttcc cgggaaagcg tcaccgtatt
     1861 gcctggatct cgcctgcggc accggagatg tggcattcct ccttgccgag cggtatcccc
     1921 gcggtaccgt cgtcgcgttg gacatctcga caccgatgct cgacatcgct cgaggacgca
     1981 accattacgg aaacatccgg ttcgagcggg gagacctgtg cgctctcccg ctccctgacg
     2041 gggttgccga catcgtgacg gggagctacg ccctgcgcaa cgcccccgag cttcggaccg
     2101 ccctcgcgga ggtccgacgg gtcctcaaac ctggcggcat cgcggcgatc ctcgactttt
     2161 ccaagccggc agacccgttt ctccagaaat tccagtacat cctcttgcgg gggtggtgcg
     2221 gactctgggg cctgctgctg cacggc
//
LOCUS       DATGYW010000183         1501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_392012, whole genome shotgun sequence.
ACCESSION   DATGYW010000183 DATGYW010000000
VERSION     DATGYW010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392012"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..299)
                     /locus_tag="VK429_02485"
     CDS             complement(<1..299)
                     /locus_tag="VK429_02485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90710.1"
                     /translation="MSGDHLFTFRVGYSGRSWEFRVGRTAAMVAVSVLGVLFVLLTQG
                     IYDIRDNISKLHELRALRERVSEQNLALYHLDTKFEGLLAEVERLRAMDNRVRSLV"
     gene            complement(412..609)
                     /locus_tag="VK429_02490"
     CDS             complement(412..609)
                     /locus_tag="VK429_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012470091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90711.1"
                     /translation="MAITEKTDKRVRCPRCDGAMVFERFQDMLTLFYAWRCVNCGEIV
                     DPVVSKNREPARGAKKKAVGE"
     gene            749..>1501
                     /locus_tag="VK429_02495"
     CDS             749..>1501
                     /locus_tag="VK429_02495"
                     /inference="COORDINATES: protein motif:HMM:NF017009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HLN90712.1"
                     /translation="MAKKRLGDLLLETGLLGEEGLTRALAEQRSKRGKLGEVIVNLGL
                     ATEQEIAQVLSLQLGIPTIDLKNTPVEPQAIELIQEKVARKHLIIPVAIDQRDLHIAM
                     ADPLSFEAFEDVRFASGFTIKPFIAPRSDVLWAIDQHYHLGSSLSTIVQDIVDERQVE
                     VVHDSQDLEGKDLDDLRKKSEAAPVIRMVNLIISEAVDQGASDIHVEPTKTALQIRHR
                     VDGLLRKTMDLPKWVQGAVVSRIKIMARMDIAE"
BASE COUNT          320 a          480 c          448 g          253 t
ORIGIN      
        1 accagcgacc ggacccggtt gtccatggca cggaggcgct cgacctcggc caaaagcccc
       61 tcgaacttgg tgtccaggtg gtaaagcgcc aggttctgtt cggacacccg ctctcgcaag
      121 gcccgcaatt cgtgtaattt cgatatgttg tcacggatgt cgtagatccc ctgggtcaga
      181 aggacgaaca ggaccccgag aacggatacc gcgaccatcg ccgcggtgcg accgacccgg
      241 aactcccagg atcgaccgga atacccgacg cggaatgtga acaggtgatc cccggacaat
      301 acagcccacc cccattgcga ttgcggaaag gaaaagagag ggcagggtag cacacaggga
      361 tcgtcgctgt caacgggatg gaaaccaaaa gaaaaacgaa gagatgcgct atcattcgcc
      421 cacggccttc ttcttggccc cacgggccgg ctcccggttc ttggagacga ccgggtccac
      481 gatctcgccg cagttcacgc acctccacgc atagaagagg gtcagcatat cctggaagcg
      541 ttcgaacacc atcgcgccgt cgcagcgcgg acatcgcact cttttatcgg ttttttcggt
      601 gatggccatt atccgttccc tcccgtacgt ttattgatgc cccgggaacg gttttggttc
      661 caattccggt tgcggaccct ttccccctta atataggatg tcaggaatca gcggcgaaag
      721 ctccaccggc gaggagaacc tcgaaaaaat ggcgaagaaa cggctggggg atcttctcct
      781 tgagaccggc ctcctcggcg aggaagggct cacgcgggcc ctcgcggagc agcgctcgaa
      841 gcggggaaag ctcggagagg tgatcgtcaa cctcgggctg gccacggagc aggagatcgc
      901 ccaggtcctc tccctgcagc tcggcatccc aacgatcgac ctgaagaaca cccccgtgga
      961 gccccaggcg atcgagctca tccaggaaaa agtcgcccgg aaacacctga tcattcccgt
     1021 cgcgatcgac cagcgcgacc tgcacatcgc gatggccgac cctttgagct tcgaggcgtt
     1081 cgaggacgtc cggttcgcct cgggcttcac catcaagccg ttcatcgccc cccggtccga
     1141 cgtcctctgg gccatcgacc agcactacca cctcggatcg tccctcagca ccatcgtcca
     1201 ggacatcgtg gacgagcgcc aggtcgaggt ggtgcacgac tcccaggacc tggaggggaa
     1261 ggacctcgac gacctgcgga agaagtccga ggccgccccc gtcatccgga tggtgaacct
     1321 gatcatctcc gaggcggtcg atcagggggc ctccgacatc cacgtggagc cgacgaagac
     1381 ggccctccag atccgtcacc gggtcgacgg gctcctgcgc aagacgatgg accttccgaa
     1441 gtgggtccag ggggcggtcg tgtcgcggat caagatcatg gcgaggatgg acatcgccga
     1501 g
//
LOCUS       DATGYW010000184         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_10627, whole genome shotgun sequence.
ACCESSION   DATGYW010000184 DATGYW010000000
VERSION     DATGYW010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10627"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(190..465)
                     /locus_tag="VK429_02500"
     CDS             complement(190..465)
                     /locus_tag="VK429_02500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90713.1"
                     /translation="MLSELKGRDVFLAGIYFSITGAVCYSRQIEETLRSLIAKGILVP
                     TERDTVIIGDEAAKEIQAHLRGELPPSIFRSLQATSKRFYRTMFRAR"
     gene            935..1462
                     /locus_tag="VK429_02505"
     CDS             935..1462
                     /locus_tag="VK429_02505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014810408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase
                     domain-containing protein"
                     /protein_id="HLN90714.1"
                     /translation="MELKGKHVAVLAEDLYEDLELWYPVHRFREAGAKVTIVGGGAGG
                     YSSKHGYPVVPDATAEKVNAADFDAVIIPGGYAPDRMRRHKAMVDLVRDMFARGKVVA
                     AICHGGWMLVSANVLRGRKATCFFAIKDDLVNAGALYEDREVVRDGNLVTSRKPEDLP
                     AFCRTILQALSGAKA"
BASE COUNT          317 a          462 c          524 g          331 t
ORIGIN      
        1 gcttttcctg gtctatccca agccgatgtt cgacgccgtc gggatcgggc tggttgccct
       61 cgtcgtggcc atgcagcgcg gtttcctgcc ccgactccgg ttttcttcgc cgggaggatg
      121 acgccaaatg cacccggcgc caccctcgaa gacgtacggc gagcgtaccc gcctgtgggg
      181 atgttgctcc taccgggctc tgaacatcgt cctgtagaac cgcttcgaag tggcttggag
      241 cgaacggaag atcgacggcg ggagctcacc ccgaaggtgc gcctggatct ctttcgccgc
      301 ttcgtcgccg atgatcacgg tgtcccgctc cgttggcacg agtatccctt tcgctatcag
      361 cgagcgcagc gtctcctcga tctgccggga gtagcacacc gccccggtga tggagaagta
      421 gatacctgcg aggaacacgt ctctgccttt cagttcactg agcacggaat atatccttgg
      481 gatacggaac tgttcgcccc cgcggcatgc aaggctgatg attgccgtaa ggatgtctcc
      541 gacttccgga ttccatggca acatcgggac ggtccttttc ttgattcaag agggtttgga
      601 caattggaca agcaaaaaaa atgcctttcg gccgccctaa taatcatccg aacgggtgcg
      661 acttttatcg atccgatgcg tgacgtggaa gagcggaatc acagaattga acacgaccgg
      721 ccataaatcg tattttctcc tttatatata tccccctgag acatctcccg ctgcaatggg
      781 ggttcccccc gccgggtgac actctcagca ggccttccgt ttgccgacgt ccagtttctt
      841 ttcgaagatg aaaccgggcc gccgggaact ccctccaacg agaaagggga acggggggat
      901 tcggaatccc gggcaccggc aagcgggagg ggagatggag ctgaaaggga aacacgttgc
      961 cgttttggcg gaggatcttt acgaggatct cgagctgtgg tatcccgtcc atcggttccg
     1021 ggaggcggga gcgaaggtga ccattgtggg gggaggtgca ggcggatact cctccaaaca
     1081 cggatacccg gtggttcccg acgcgacagc ggagaaagta aacgcggccg actttgacgc
     1141 ggtgatcata ccgggcggct acgcgcccga ccggatgcgc cgtcacaagg cgatggtgga
     1201 cctggtccgc gacatgttcg cgagagggaa agtggtcgcg gcgatctgcc acggcggctg
     1261 gatgctggtt tcggcgaacg tgttgcgggg caggaaagcg acctgcttct tcgccataaa
     1321 ggacgacctt gtgaacgcgg gtgccctgta cgaggaccgg gaagtcgttc gggacgggaa
     1381 cctcgtcacg tcgcgaaagc cggaagatct gccggcattc tgccggacga tcctccaggc
     1441 cctttccggg gcgaaggcgt aaagcttcgt gatcccgtgg ttctacggct tgccgatccc
     1501 ccggttgaaa ggagacctcc atggaacttt cggacaaacg gtgcgttcct tgccggggcg
     1561 gagttccggc gatgggagcg gaggaggcgg gaaggctgat ttcccaggtc tccggctgga
     1621 cgctcgggga ggat
//
LOCUS       DATGYW010000185         2873 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_10635, whole genome shotgun sequence.
ACCESSION   DATGYW010000185 DATGYW010000000
VERSION     DATGYW010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2873
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10635"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1405
                     /locus_tag="VK429_02510"
     CDS             <1..1405
                     /locus_tag="VK429_02510"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HLN90715.1"
                     /translation="TVDFDTASGLEPKSDVKMAGVPIGKVEEIRLAGNRARLVLRIHR
                     EIQIPIDSVATIQTQGLLGEKYVEILPGKDVQRNLPAGGQVANTLSPVNLDEMIRKLS
                     AIGDDVKKFSDSLSSTFGTEEGKKALGDILRDVQATTASLRTVVTGNEQRFERIVANI
                     DRLSADLSDISSANKQDVRATIANLRAFSDTLKSETPELVRKLEEMSERVSGVVGDNR
                     ENLKVSIQNLKTASARLDNTLDAAEKVMVKIDRGEGTLGKLVNDNTAHTSLTDTLDGV
                     NRYVRKYDALRMTLIPWVEYQTETSDWKYYLNLKIQPTADKYYLLGVVNDPRGKRTES
                     TTLLSVGGNPPVETKEVKFEDKWKFNALLAKRFSRVTLRGGIMESAGGLGLEYDVVKD
                     RFSVGADIFDFNRPDNRAHLKVYGNYDIVKNLFITGGADDILNSYSQYRTFFLGFGIK
                     FPDDDLKTVIGAVPIRP"
     gene            1463..>2873
                     /gene="purH"
                     /locus_tag="VK429_02515"
     CDS             1463..>2873
                     /gene="purH"
                     /locus_tag="VK429_02515"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: protein motif:HMM:NF002049.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HLN90716.1"
                     /translation="MARIHRAIVSVSDKTGVAQFCAALSRLGVELYASGGTAKLLREK
                     KVPVRLIEEYTGFPEMLDGRVKTLNPKIHGGLLALRGNPAHMKTIGEHGIVPFDMLIG
                     NLYPFEATIARPGCTREEAIENIDIGGPSMLRSAAKNSQSVAVVCDPADYPLILAQLK
                     KNAGNLDEETMKELGRKAFALTARYDAAISNYLGAGQGGVEPFPATFTAQWRKLQGLR
                     YGENPHQTASFYTDTTLPDEPTLGGAQQLQGKELSYNNIVDIDAALQLALEFSIPAAV
                     VIKHTNPSGVGVSKRRLVDAFKKARECDPVSAYGGVIGFNRPVNSETAREVANTFFEA
                     IIAPSYDKEARKILSAKKNLRVLATGGVFRWSGARTFEMKRVSGGLLLQTCDRHGLDP
                     KDLKVVTKRKPTTDEVEAMLFAWKVCKHVKSNAIVYAMKDRTVGVGAGQMSRVDSAKI
                     AVMKAQHPTKGTVVASDAFF"
BASE COUNT          587 a          908 c          943 g          435 t
ORIGIN      
        1 caccgtggat ttcgacacgg catcgggcct cgagcccaag tcggacgtga agatggccgg
       61 ggtcccgatc gggaaggtcg aggagatccg gctcgccgga aaccgcgccc gcctggtcct
      121 gcgcatccat cgggagatcc agatcccgat cgactcggtg gctaccatcc agacgcaggg
      181 cctcctcggc gagaaatacg tcgagatcct cccgggcaag gacgtccagc gcaacttgcc
      241 ggcgggggga caggtcgcca acaccctgag ccccgtgaat ctcgacgaga tgatcaggaa
      301 actttcggcg atcggggacg acgtcaagaa gttctccgat tcgctctctt ccaccttcgg
      361 gacggaggag gggaagaagg cgctcgggga catccttcgc gatgtccagg cgaccaccgc
      421 gtccctccgg accgtcgtga cggggaacga acagcgcttc gagcggatcg tggcgaacat
      481 cgaccgcctc tccgcggacc tctccgacat ctcctcggcg aacaagcagg acgtccgggc
      541 gacgatcgcg aatctccggg ctttctccga cacgctgaag agcgaaacgc cggagctggt
      601 gcgaaagctc gaggagatga gcgagcgggt gagcggcgtc gtgggcgaca accgcgagaa
      661 cctgaaggtg agcatccaga acctgaagac cgcctccgcg cgcctcgaca acacgctgga
      721 cgccgccgag aaggtgatgg tcaagatcga ccgcggcgag gggaccctcg gcaagctcgt
      781 caacgacaac acggcccaca cctccctcac ggacaccctc gacggagtca accggtacgt
      841 ccggaagtac gacgcgctgc ggatgacgct cattccgtgg gtcgagtacc agaccgaaac
      901 ctccgactgg aagtattacc tgaacctgaa gatccagccg acggcggaca agtattatct
      961 cctcggcgtc gtaaacgacc cgagggggaa acgcacggaa tccaccaccc tcctcagcgt
     1021 cggcgggaat cctccggtcg agacgaagga agtgaagttc gaggacaagt ggaagttcaa
     1081 cgcccttctg gcgaagcggt tctcccgtgt cacgctccgg ggcgggatca tggagtccgc
     1141 ggggggattg gggctggagt acgacgtggt gaaggaccgg ttcagcgtcg gggcggacat
     1201 cttcgacttc aaccggcccg ataaccgggc gcatttgaag gtgtacggca actatgatat
     1261 cgtcaaaaac cttttcatca cgggcggtgc ggacgatatc ctgaatagct attcgcagta
     1321 ccggaccttc tttctcgggt tcgggatcaa gttccccgac gacgacctga agaccgtgat
     1381 cggggccgtt cccatcaggc cgtgacgaag cgctccgatc cgcaaattcc gcaacgcgac
     1441 acctaaggaa ggatcccagg ccatggcgag aatccatcgg gcgatcgtca gcgtatccga
     1501 caagaccggc gtggcgcagt tctgcgccgc gctctcccgg ctcggcgtcg agctgtacgc
     1561 ctcggggggc acggcgaagc tgctgcggga aaagaaggtc ccggtacgcc tcatcgagga
     1621 gtacaccggg ttccccgaga tgctggacgg gcgggtgaaa accttgaacc cgaagatcca
     1681 cggcgggctt ctcgccttgc gcgggaatcc tgcgcacatg aagacgatcg gcgagcacgg
     1741 gatcgtcccc ttcgacatgc tgatcggaaa cctgtacccc ttcgaggcga cgatcgcgcg
     1801 ccccggctgc acgcgggagg aggcgatcga aaacatcgac atcggcggac cttcgatgct
     1861 gcggtccgcc gcgaagaatt cccagtcggt cgcggtggtg tgcgatcccg cggactaccc
     1921 ccttatcctc gcgcagttga agaagaacgc gggaaacctc gacgaggaga ccatgaagga
     1981 gctcgggcgg aaggcgttcg cgctgaccgc gcggtacgac gcggcgatct cgaactacct
     2041 cggcgcgggg caggggggtg tggagccgtt ccccgcgacc ttcacggccc agtggcggaa
     2101 gctccagggg ctccggtacg gcgagaaccc gcaccagacg gcgtcgttct acaccgacac
     2161 cacgctgccc gacgagccga cgctgggagg cgcgcagcag ctgcagggga aggagctctc
     2221 ctacaacaac atcgtcgaca tcgacgcggc gctgcagctt gccctcgagt tctccatccc
     2281 cgccgcggtc gtcatcaagc acacgaaccc ctccggcgtg ggggtctcga agcgccgtct
     2341 cgtggacgcc ttcaagaaag cgcgcgagtg cgaccccgtc tccgcctacg gaggcgtgat
     2401 cggcttcaac cggccggtga actccgagac ggcccgggaa gtcgccaaca ccttcttcga
     2461 ggcgatcatc gccccctcct acgacaagga ggcccgaaag atcctctcgg cgaagaagaa
     2521 cctccgcgtg ctcgccacgg gcggcgtgtt ccggtggtcg ggcgcccgga cgttcgagat
     2581 gaagcgggtg agcggcgggc tcctcctcca gacgtgcgac cggcacgggc tcgacccgaa
     2641 ggacctgaag gtggtgacga agcggaagcc cactacggac gaggtcgagg cgatgctgtt
     2701 cgcgtggaag gtgtgcaagc acgtaaaatc gaacgcgatc gtctacgcga tgaaggaccg
     2761 caccgtcggg gtgggggcgg ggcagatgag ccgggtcgac tcggcgaaaa tcgcggtgat
     2821 gaaggcgcag catccgacga agggaaccgt cgtcgcctcc gacgccttct ttc
//
LOCUS       DATGYW010000186         1539 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_10721, whole genome shotgun sequence.
ACCESSION   DATGYW010000186 DATGYW010000000
VERSION     DATGYW010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1539
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10721"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..203
                     /locus_tag="VK429_02520"
     CDS             <1..203
                     /locus_tag="VK429_02520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90717.1"
                     /translation="GQAIEAHRTADPREDAPDALRLMDNALSYAHRAIDDLLHEKGLP
                     PHQPMDFAEWYDVVEVPFRDEW"
     gene            220..789
                     /locus_tag="VK429_02525"
     CDS             220..789
                     /locus_tag="VK429_02525"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLN90718.1"
                     /translation="MIDLERYPKEITLHNGVTLVFRPMGRDDVDRLWVFFGRVPPEDK
                     MYFRQDVSRREVVQHWADTLDYGLVLPILALEGDRVVGDATLHRQRTGWKQRVGVVRV
                     QIAPDYRHIGLGTAMVRELRHLGEKSALHYLMAEVIEEQAAAVRAFEKMGFVRAATYR
                     NFVNDQKGGLHNLLVLLYRMSTSPDDRNV"
     gene            853..>1539
                     /locus_tag="VK429_02530"
     CDS             853..>1539
                     /locus_tag="VK429_02530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015718456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HLN90719.1"
                     /translation="MEKESLYRRAKRVLLGAPRDLFDPKIFHNVSLIAFFAWVGLGAD
                     GISSSSYGPEEAYLALGGHTVLALFVAAATVLTVFIISGSYAQIIEAFPSGGGGYIVA
                     SKLLGERAGVVSGSALVIDYILTITISIAAGADAIFSLLPHQYLPYKIWFVTAVILTL
                     IWMNLRGIKESVAVFTPIFMVFMLSHIPLLLYAMLRHVPEMPAVAVDVSRDFRTSVGQ
                     MGWVGLGALLM"
BASE COUNT          246 a          524 c          491 g          278 t
ORIGIN      
        1 tcggccaggc gatcgaggcg caccggaccg ccgatccccg ggaggacgca ccggacgcgc
       61 ttcgcctcat ggacaacgcc ctctcctacg cccaccgggc gatcgacgac ctcctccacg
      121 aaaaagggct gccgccgcac cagccgatgg acttcgcgga gtggtacgat gtcgtcgaag
      181 tcccgttccg ggacgagtgg taggcggagg ggccctgaga tgatcgatct cgagcggtac
      241 ccgaaggaga tcaccctgca caacggggtg acgctggtct tccggccgat gggtcgggac
      301 gacgtggacc ggctgtgggt cttcttcggg cgggttcccc ccgaggacaa gatgtacttc
      361 cgccaggacg tgagccgccg cgaggttgtg cagcattggg cggacaccct cgactacggc
      421 ctcgtcctcc cgatcctcgc gctcgaaggg gaccgcgtcg tgggcgacgc caccctccac
      481 cgccagagga cggggtggaa gcagcgggtc ggggtggtgc gcgtccagat cgcccccgat
      541 taccggcaca tcgggctcgg gaccgcgatg gtccgcgaac tccggcacct cggggagaag
      601 tcggccctcc attacctcat ggccgaagtg atcgaggagc aggcggccgc ggtgcgcgcc
      661 ttcgagaaga tggggttcgt ccgtgccgcg acgtaccgga acttcgtcaa cgaccagaag
      721 ggggggcttc acaacctgct ggttctcctc taccggatgt ccacctcgcc ggatgaccgg
      781 aacgtctgaa acgttgtata ctcccccctt cggccggccc gggactccct ttccggaaag
      841 atgacgacac cgatggaaaa agaatctctg taccggcggg caaagcgcgt actgctcggg
      901 gctccccggg acctcttcga cccgaagatc ttccacaacg tctccctcat cgccttcttc
      961 gcctgggtgg ggctgggcgc cgacgggatc tcctcctcct cgtacggccc ggaggaggcg
     1021 tacctcgccc tcggcgggca caccgtcctc gcgctcttcg tcgccgcggc cacggtgctc
     1081 accgtcttca tcatctcggg cagctacgcg cagatcatcg aggcgttccc ctccggcggc
     1141 ggcgggtaca tcgtcgcgtc gaagctcctc ggggagaggg cgggggtggt ctcgggctcg
     1201 gcgctggtca tcgactacat cctgacgatc accatctcaa tcgcggcggg ggcggacgcc
     1261 atcttcagcc tcctccccca ccagtacctt ccgtacaaga tctggttcgt caccgcggta
     1321 atcctgaccc taatctggat gaacctgcgg gggatcaagg agtccgtcgc cgtcttcact
     1381 cccatattca tggtcttcat gctgagccac atcccgcttc tcctttacgc aatgctgcgc
     1441 catgttcccg agatgcccgc ggtggctgtc gacgtgtccc gcgatttccg cacctccgtg
     1501 gggcagatgg gatgggtggg gctcggtgcg ctcctgatg
//
LOCUS       DATGYW010000187         2718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_231375, whole genome shotgun sequence.
ACCESSION   DATGYW010000187 DATGYW010000000
VERSION     DATGYW010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231375"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..699)
                     /locus_tag="VK429_02535"
     CDS             complement(<1..699)
                     /locus_tag="VK429_02535"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLN90720.1"
                     /translation="MKPLERILKTLAVRFAVSPLDTLTDTCCRLLPGREVLPQVLRLQ
                     EITRQTPLILQIETTNACNARCVFCAYPMMLREKGIMSMPLFERIVQEYAAMGGGPVS
                     LTPVVGDALLDPHLLKRLRILEACPEIRQVSLTTNGIALERYPDEDVCRLLEAIDCIQ
                     VSIGGLDAATYETMYGVNRFPQVQRGLERLLALRETVSAPAHITLAFRTNDWKFERRF
                     RRQLDGFRRRGVFVS"
     gene            complement(755..2104)
                     /gene="bioA"
                     /locus_tag="VK429_02540"
     CDS             complement(755..2104)
                     /gene="bioA"
                     /locus_tag="VK429_02540"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020257528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HLN90721.1"
                     /translation="MDRKSCLRKDLRHSWHPYTQMSTLATEPPMLIDRAEGLFLFDAE
                     GNRYYDAISSWWCVVHGHGHPRIREAVARQMERLDHVLFAGATHEPAVRLASRLAAIA
                     PEGLSRVFFSDNGSTAVEVALKMSLQCWRNLGREERTGFVCLDHGYHGDTTGCMSVSG
                     VEAFLRAFRPILFPARRVPSPYCYRCPVGKTYPGCGVSCVDALRDALREGGGTIAAVI
                     LEPLLLGAGGMIVYPPEYLSRAAALAREHGVHLILDEVATGFGRTGTMFACEQAGVSP
                     DFLCLSKGLTGGTMPLAATLTTAEVYNSFLGGPDSGKTFYHGHTYTANPVGCAAALAS
                     LDLFEEEGLVDRVARLAPRLAEGVRELAELPRVGDVRGIGMVAALELVSDKETREPLP
                     GTAPLFRDLRREGLRRGLFLRPLGNVVYLFLPPAVTREALDDILDRFTGVLRSVLKS"
     gene            complement(2104..>2718)
                     /gene="bioD"
                     /locus_tag="VK429_02545"
     CDS             complement(2104..>2718)
                     /gene="bioD"
                     /locus_tag="VK429_02545"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: protein motif:HMM:NF024891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HLN90722.1"
                     /translation="VTTQKWVETGVTDGPSDIDVHRRLMGDSDAGPGPLPADRCPYRF
                     SLPASPHLAAAREGRRVDPAVIEAAYRRLAETHDVVLVEGAGGFLVPLSEELLTGDLV
                     ARIGLPVLVVAENRLGCVNDALLTVEAVRRRGIPLLGIVFNRLPGEGDGTRAEVQADN
                     PRIVAEISQAPILGEVPLLRDPARGGAEAFAPVGQAFLERWRST"
BASE COUNT          472 a          959 c          877 g          410 t
ORIGIN      
        1 gctgacgaaa accccccgcc ggcggaaccc atccaactgc cgccggaagc gcctctcgaa
       61 cttccagtcg ttcgtccgga aagcgagggt gatgtgcgcc ggggcggaga cggtttctct
      121 gagtgccagc agccgctcca acccccgctg aacttgcgga aatcggttga ctccgtacat
      181 cgtctcgtag gtagccgcat cgagcccgcc gatgctgact tggatgcaat caatcgcttc
      241 gagaaggcgg caaacatcct cgtcgggata tcgttcgaga gcgatcccat ttgtcgttag
      301 cgatacctga cggatctccg gacaagcctc caatatcctc aaacgtttca gcaggtgtgg
      361 atcgagcagt gcatccccga caacgggcgt tagagaaacc gggcctcccc ccatcgccgc
      421 atactcctgc acgatccgct cgaacaaagg catgctcatg atcccctttt cccgtagcat
      481 cattggatag gcgcagaata cgcaacgggc attgcaggcg ttcgtggttt cgatttggag
      541 aatgagaggg gtttgacgcg ttatctcttg cagccgcaag acctgaggca acacctcccg
      601 gcccggcaat aagcggcagc aggtatcggt cagagtgtcc agcggggata ctgcgaagcg
      661 gaccgccaag gttttcagta ttcgctcgag gggtttcatt cgggtcgctt cccctgatcg
      721 ccgcggcaac gccgactcgt acagaccgcg atactcatga tttgagcacg ctgcgtaaga
      781 cgccggtaaa gcggtcgagg atatcgtcga gggcttcgcg ggtgaccgcc ggggggagaa
      841 acaggtagac cacgttcccg agcgggcgca ggaagagccc gcggcgcaac ccctcgcgac
      901 ggagatcacg gaacagcggc gcggttcccg gcagcggctc cctggtttcc ttgtccgaaa
      961 ccagctcgag cgccgccacc atcccgatcc cgcgaacgtc cccgaccctc ggcagctccg
     1021 cgagttcccg caccccttcc gcgaggcggg gggcgaggcg cgccacccgg tcgacgagcc
     1081 cctcttcctc gaacaggtcg agggaggcga gcgcggcggc gcagccgacc gggttcgccg
     1141 tgtacgtgtg gccgtggtag aacgtcttcc cgctgtccgg gcccccgaga aaggagttgt
     1201 acacctccgc ggtggtgagc gtcgccgcca gcggcatcgt cccgcccgtc aatcccttcg
     1261 agaggcagag gaaatccggc gagacgccgg cctgctcgca ggcgaacatc gtccccgttc
     1321 gcccgaaccc ggtcgccacc tcgtcgagga tgaggtggac gccgtgctcc cgcgcgaggg
     1381 ccgccgcgcg ggaaaggtat tcgggcggat agacgatcat cccgcccgcg cccagcagca
     1441 gcggctcgag gatcaccgcg gcgatcgttc cgcctccttc ccgcagcgcg tcgcggaggg
     1501 cgtcgacgca cgagaccccg cacccgggat acgtcttccc caccgggcaa cggtagcagt
     1561 acggcgaggg aacccggcgg gcggggaaca ggatcggccg gaacgcccga aggaacgcct
     1621 cgacgccgct gacgctcatg cacccggtgg tgtccccgtg gtacccgtga tcgaggcaga
     1681 cgaacccggt ccgctcctcc cgcccgaggt tgcgccagca ctgcagcgac atcttgagcg
     1741 cgacctccac cgccgtggag ccgttgtccg agaagaagac gcgcgaaagc ccctccgggg
     1801 cgatcgcggc gagccgcgag gccaggcgca ccgcgggctc gtgggtggcc ccggcgaaca
     1861 ggacgtggtc cagccgctcc atctgccgcg ccaccgcctc ccggattctc gggtgcccgt
     1921 gcccgtggac gacgcaccac cagctcgaga tcgcgtcgta gtaccggttc ccttccgcgt
     1981 cgaagaggaa gagcccctcc gcgcggtcga tcagcatcgg cggttccgtc gcaagggtgc
     2041 tcatctgggt gtacggatgc cagctgtgcc gcaggtcttt ccggaggcag cttttccgat
     2101 ccatcaggtc gacctccacc gttcgagaaa cgcctgcccg acgggtgcga acgcctccgc
     2161 cccgccccgg gccgggtcgc gcagcagcgg aacctcgccc aggatgggcg cctgcgagat
     2221 ctccgccacg atccgcggat tgtcggcctg cacctccgcc cgcgtcccgt ccccttcgcc
     2281 cgggaggcgg ttgaagacga tccccagcag agggatcccg cgtcggcgca ccgcctccac
     2341 ggtaagcagc gcgtcgttca cgcagccgag ccggttttcc gccaccacga ggacgggaag
     2401 gccgatccgc gcgacaaggt cgccggtcaa cagttcctcc gagagcggga cgaggaagcc
     2461 ccccgccccc tcgaccagaa caacgtcatg ggtctccgcg agacggcgat acgccgcctc
     2521 gatcacggcc gggtccaccc gccgcccctc gcgcgccgcc gcaaggtgcg gggaggcggg
     2581 gagggagaac cggtacgggc accggtccgc agggagcggt cccggcccgg cgtcggagtc
     2641 tcccatcagg cgccggtgga catcgatgtc cgacggaccg tccgtcacgc ccgtctcgac
     2701 ccacttctgc gtcgtcac
//
LOCUS       DATGYW010000188         2540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_446203, whole genome shotgun sequence.
ACCESSION   DATGYW010000188 DATGYW010000000
VERSION     DATGYW010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2540
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446203"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VK429_02550"
     CDS             <1..440
                     /locus_tag="VK429_02550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HLN90723.1"
                     /translation="GALRLARFNVQINTVEKGQFNGLPIPAAAVFVASMILLFYYLGG
                     SGSFKHFAVLLTIYVLAFLMVSTVKFNSFKDLEPLRRRPFNTLVVFVFLALLLAAEPQ
                     VMTFVFVSAYIISGPVGEVVDAIRRRRTKRTESEKPVHGHDAH"
     gene            421..1683
                     /gene="leuC"
                     /locus_tag="VK429_02555"
     CDS             421..1683
                     /gene="leuC"
                     /locus_tag="VK429_02555"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003513635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HLN90724.1"
                     /translation="MGMTLTEKILARHAGRERVAPGELILAKVDLALGNDVTSPIAIQ
                     AFRSLGAGAVFDRERIALVPDHFAPNKDIKSAEQVKMMREFAKEFGIVNYFEVGRMGI
                     EHVLLPDEGLVVPGDLVIGADSHTCTYGALCAFSTGVGSTDLAAAMFSGEVWLKVPET
                     LRIVLSGRPAKWVEGKDVILHIIGEIGVDGALYRAMEYAGDGIAHLSMAWRFTMANMA
                     IEAGAKNGIFPFDAATKAYSDGRAKRKYEVVTADPDARYADEISVDMSALEPVVAFPH
                     LPENTRPLSKVGNVPIDQVVVGSCTNGRIEDLRSAAAVIRGRKVHDGVRMLIFPATQE
                     IYLQAMREGLMETFVTAGAAFSTPTCGPCLGGHMGILAKGERAISTTNRNFVGRMGHP
                     ESEVYLSNPAVAAASAVLGRIGGPDELP"
     gene            1702..2199
                     /gene="leuD"
                     /locus_tag="VK429_02560"
     CDS             1702..2199
                     /gene="leuD"
                     /locus_tag="VK429_02560"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006524014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HLN90725.1"
                     /translation="MEMKGKAWKYGDDVDTDVIIPARYLNTSDPAELARHCMEDIDAS
                     FASKVAPGDFIVAGKNFGCGSSREHAPIAIKASGASAVIARSFAQIFYRNAFNMGLPI
                     FEAPDAVDEIEAGDRLAVDMERGSLRNKTKGKEYRFTPIPPFMRELVAAGGLLNYISK
                     RKKGA"
     gene            2199..>2540
                     /locus_tag="VK429_02565"
     CDS             2199..>2540
                     /locus_tag="VK429_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002727847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HLN90726.1"
                     /translation="MAAKKICVFPGDGIGPEVVREGLSVLRIIEQAAGKRMFETEEEL
                     LGGASYDVHGVPMAQNALALAKASDAVLLGAVGGPKWDPLPFAVRPERALLGLRKELG
                     LFANLRPAVVFA"
BASE COUNT          416 a          800 c          917 g          407 t
ORIGIN      
        1 gcggggcgct gcggctcgcg cgcttcaacg tccagatcaa cacggtggag aaggggcagt
       61 tcaacggact ccccatcccg gcggcggcgg tcttcgtcgc ctccatgatc ctgctcttct
      121 actaccttgg agggtcgggc agcttcaagc acttcgccgt gctcctgacg atctacgtgc
      181 tcgccttcct catggtgagc accgtaaaat tcaactcctt caaggacctc gaaccgctcc
      241 ggcggcgccc cttcaacacg ctggtggtgt tcgtgttcct cgcgctgctc ctggcggcgg
      301 agccgcaggt gatgaccttc gtcttcgtct ccgcgtacat catttccggg ccggtgggcg
      361 aggtggtcga cgcgatccgc cgccgccgga caaagcgcac ggaaagcgag aagccggtcc
      421 atgggcatga cgctcactga aaaaatcctc gccaggcacg cagggaggga gcgcgtcgcg
      481 ccgggagagc tgatcctggc gaaggtcgat ctcgccctcg ggaacgacgt caccagcccg
      541 atcgcgatcc aggcgttccg gtcgctgggg gccggggcgg tgttcgaccg cgagcggatc
      601 gccctggtgc ccgaccactt cgcgccgaac aaggacatca agagcgccga acaggtcaag
      661 atgatgcgcg agttcgcgaa ggagttcggc atcgtgaact acttcgaggt cgggcggatg
      721 gggatcgagc acgtccttct cccggacgag gggctggtcg ttcccggcga tctcgtgatc
      781 ggcgcggaca gccacacctg cacctacggc gccctgtgcg ccttctccac cggtgtgggg
      841 agcaccgacc tcgccgcggc gatgttctcc ggggaggtgt ggctcaaggt ccccgagacg
      901 ctgcggatcg tcctttcggg ccgccccgcg aagtgggtcg aggggaagga cgtgatcctc
      961 catatcatcg gcgagatcgg ggtggacggg gcgctctacc gggcgatgga atacgcgggg
     1021 gacgggatcg cgcacctgtc gatggcgtgg cgcttcacca tggcgaacat ggcgatcgag
     1081 gcgggggcga aaaacgggat cttcccgttc gacgcggcga cgaaggcgta ctccgacgga
     1141 agggcgaagc ggaagtacga ggtcgtgacg gccgatcccg acgcgcggta cgcggacgag
     1201 atctccgtcg acatgtccgc gctcgagccg gtggtcgcgt tcccgcacct gccggagaac
     1261 acgaggccgc tgtcgaaggt cgggaacgtc ccgatcgacc aggtcgtggt ggggtcgtgc
     1321 accaacgggc ggatcgagga cctgcgcagc gccgcggcgg tgatccgggg gcggaaggtt
     1381 cacgacggcg tgaggatgct catctttccc gcgacccagg agatctatct ccaggcgatg
     1441 cgggagggac tgatggagac gttcgtcacg gcgggggcgg ccttctccac ccccacctgc
     1501 gggccgtgcc tgggcggcca catggggatc ctggcgaagg gggaacgggc gatctcgacg
     1561 acgaaccgga acttcgtcgg ccggatgggg caccccgaga gcgaggtgta cctctccaac
     1621 ccggcggtgg ccgcggcctc cgcggtgctg gggaggatcg gggggccgga tgagctgccg
     1681 tgagtgcggg ggcccgatga catggagatg aagggcaagg cgtggaagta cggggacgac
     1741 gtcgacacgg acgtcatcat ccccgcgcgg tacctgaaca cctccgaccc ggcggagctc
     1801 gcccggcact gcatggagga catcgacgcc tccttcgcgt cgaaggtggc gccgggcgac
     1861 ttcatcgtcg ccgggaagaa cttcggatgc ggctcctccc gggagcacgc cccgatcgcg
     1921 atcaaggcgt ccggcgcgtc ggcggtcatc gcgcgctcgt tcgcccaaat cttctaccgg
     1981 aacgccttca acatgggttt gccgatcttc gaggcccccg acgccgtcga cgagatcgag
     2041 gccggggacc gcctcgccgt ggacatggag cggggttccc tccggaacaa gacgaaggga
     2101 aaggagtacc ggttcacccc gatccccccg ttcatgcggg agctggtggc cgccgggggg
     2161 ctgctgaact acatatcgaa gcggaagaag ggggcttgat ggccgcgaag aagatctgcg
     2221 tgttccctgg cgacgggatc ggtccggagg tcgtccggga ggggctgtcc gtcctgcgga
     2281 tcatcgagca ggcggccggg aagcggatgt tcgagacgga ggaggaactc ctgggcggcg
     2341 cttcgtacga cgtccacggg gtcccgatgg cccaaaacgc cctcgcgctg gcgaaggcgt
     2401 ccgacgcggt gctgctcgga gcggtcggcg gtccgaagtg ggatcccctc ccgttcgccg
     2461 ttcgtcccga gcgggcgctc ctggggctgc gcaaggagct gggtctcttc gcgaacctgc
     2521 gtcccgcggt cgtgttcgcc
//
LOCUS       DATGYW010000189         1847 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_446206, whole genome shotgun sequence.
ACCESSION   DATGYW010000189 DATGYW010000000
VERSION     DATGYW010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446206"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..507)
                     /locus_tag="VK429_02570"
     CDS             complement(<1..507)
                     /locus_tag="VK429_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020148092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HLN90727.1"
                     /translation="MDIPYTVEVRRDTGLTNGKIGIWLFLASEVMLFGALFASYILIR
                     TGATSWPKGDTILNVPLATFNTIVLISSSVTMVMAWASLMRRRFGTFRVYMGATILLG
                     FVFLVVKYFEYSHKFETGLFPSTNNFLAIYFTLTGLHMLHVMGGMAVNAYFWGPGAKL
                     WKTNPEWFI"
     gene            complement(513..>1847)
                     /locus_tag="VK429_02575"
     CDS             complement(513..>1847)
                     /locus_tag="VK429_02575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007418871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HLN90728.1"
                     /translation="FLGGVTMLLSFVIPAGGAAQSGWTSYVPLSDIAGSGQTWWLVGM
                     VFLITSSLLGAINFITTIIQLRAKGLSFMRFPFFVWAQLVTAFLLLLAFPPLEAASVM
                     QLMDRLAGTSFFLPSGLVVSGQVLNVAGGGNPILWQHLFWFLAHPEVYVLILPAMGIV
                     AEIIANNTRKPLWGYRSMVYSIVFLGFMSFIVWAHHMFMTGMGTAMAAFFQTTTMIIS
                     IPSVVILTALVISLWGGSIRYNTPMLFAVGFLPMFGIGGLTGLPLAFNIADIPLHDTY
                     YVIGHFHYVVAPGTIFALFAGIYYWFPKATGRKMNETLGKIHFVGSFVCMNVVFMPMF
                     IVGLAGVSRRLFDGGASYAFAQPVLHLNVVSSWGAWILAIFQIPFIFNFFWSIWKGEK
                     AEQNPWQATTIEWAAPSPPPHGNFLVAPEAHRGPYEYSVPGAAKDFLPQYEA"
BASE COUNT          412 a          533 c          613 g          289 t
ORIGIN      
        1 gatgaaccac tccgggttcg tcttccagag cttcgcgcca ggaccccaga aataagcgtt
       61 caccgccatg ccgcccatca cgtggagcat gtgcaggccg gtcaacgtga agtagatggc
      121 aaggaagttg ttggtgctgg gaaagaggcc ggtctcgaac ttgtggctgt attcgaagta
      181 cttgaccaca aggaagacga aaccgagcag gatcgtcgct cccatgtaga cccggaaggt
      241 cccgaagcgg cggcgcatca gcgaggccca ggccatgacc attgtgacgg aggacgagat
      301 caggacgatc gtattgaacg tggcgagcgg gacgttcaga atcgtgtctc ccttcggcca
      361 gctcgtcgct cccgtccgaa tcaggatgta gctcgcaaac agggcgccga agagcatgac
      421 ctctgaggcc aggaagagcc agatgccgat cttgccgttc gtaagaccgg tgtcgcggcg
      481 gacttctacg gtgtaaggaa tgtccattcc gatcaggcct catattgcgg caggaagtcc
      541 ttggccgcgc cgggaacgct gtactcgtag ggtccccggt gcgcttccgg cgccacgagg
      601 aaattcccat gcggcggtgg cgagggagct gcccactcga tcgtcgtggc ctgccacggg
      661 ttctgctcgg ccttctcccc cttccagatg ctccagaaga aattgaagat gaagggaatc
      721 tggaagatcg cgaggatcca cgcgccccac gaggacacga cgttcaggtg gaggaccggc
      781 tgcgcaaagg cgtagctcgc cccgccgtcg aacaatcgcc gtgagacgcc agccagcccc
      841 acgatgaaca tcggcatgaa gacgacgttc atgcagacga acgagccgac gaaatggatc
      901 ttaccgagcg tctcgttcat cttccgcccg gttgcctttg gaaaccagta gtagatcccc
      961 gcgaagaggg cgaagatcgt cccgggagcg acgacgtagt ggaagtggcc gatgacgtag
     1021 taggtgtcgt gcagcgggat gtccgcgatg ttgaaggcga gcggaagccc cgtgagtccg
     1081 ccgatgccga acatcgggag gaagccgacc gcgaacagca tgggcgtgtt gtagcgtatc
     1141 gatccgcccc agagcgagat gaccagggcc gtgaggatca cgaccgatgg gatcgaaatg
     1201 atcatcgtgg tcgtctggaa gaacgccgcc atcgccgtcc ccatcccggt catgaacatg
     1261 tggtgcgccc agacgatgaa cgacatgaag ccgaggaaga cgatcgagta gaccatcgaa
     1321 cggtagcccc acaggggctt ccgcgtgttg ttcgcgatga tctcggccac gattcccatc
     1381 gcgggaagga tcaggacgta gacctccggg tgcgccagga accagaacag gtgctgccag
     1441 aggatcgggt tgcctccgcc ggccacgttg aggacctggc cgctgacgac gaggccgctc
     1501 ggcaggaaga agctcgtgcc ggccagacga tccatcagct gcatgaccga cgcggcctcg
     1561 agcggcggga aggccaggag caacaggaag gccgtgacga gctgggccca cacgaagaag
     1621 gggaaacgca tgaaagacag ccccttggcg cggagctgga taatggtcgt gatgaagttg
     1681 atcgctccga gcagcgacga ggtgatcagg aagaccatcc cgacgagcca ccacgtctga
     1741 cccgagcccg cgatgtcgga gaggggcacg taggacgtcc agccggactg cgcggccccg
     1801 ccggcgggga tgacgaagct gaggagcatc gtgacgccgc cgaggaa
//
LOCUS       DATGYW010000190         2404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_285434, whole genome shotgun sequence.
ACCESSION   DATGYW010000190 DATGYW010000000
VERSION     DATGYW010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_285434"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /locus_tag="VK429_02580"
     CDS             <1..605
                     /locus_tag="VK429_02580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012460282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GMP synthase (glutamine-hydrolyzing)"
                     /protein_id="HLN90729.1"
                     /translation="KIPDVGFLAQGTLYPDVIESISFKGPSAVIKSHHNVGGLPERMH
                     LKLIEPLRELFKDEVRELGRELGVPARVLERQPFPGPGLAVRIIGPVTGERLRILREA
                     DAIVDEEIRGAGLYESIWQSFAVLLPIKTVGVMGDFRTYENVAAVRAVHSQDGMTADW
                     VRLPYDVLQRISTRIINEVKGINRVAYDISSKPPGTIEWE"
     gene            602..>2404
                     /gene="dnaE"
                     /locus_tag="VK429_02585"
     CDS             602..>2404
                     /gene="dnaE"
                     /locus_tag="VK429_02585"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HLN90730.1"
                     /translation="MKSFVHLHLHSEYSLLDGTIQFKPLIERVKKLSMPAVAVTDHGG
                     MMGTIEFYEEALKGGVKPILGTEIYVAPGSRTERKVAPNGEYAYHLILLAENDTGYRN
                     LMRLSSLAHTEGFYYRPRVDKELLRRYSEGLIATSACLQGEVPFAMGTEGEAKALEAL
                     EEYKSIFPDGRFYLEIQDNGLPDQERMNPLLIALARRTGTPLVATNDCHYLNPGDDKL
                     QEILLCLQTGKTISDPTRMRFGSDQFYVKTAEEFERAFGHVAPDALANTLAIAERCNV
                     KIELGVNKIPEIALPPGVTADGKLREMATAGLERRLEERAKREGELAQALVEEYRRRL
                     AYELSVIEKTGFASYFLIVADFIGWAKDEKIPVGPGRGSAAGSLVAYCVRITEVDPIR
                     YKLLFERFLNPERVSIPDIDCDFCKNRREEVIAYVQRTYGTENVAQLITFGTWKPRGA
                     VRDVGRVLEMPYAEVDRIAKMIPADLKMTVEDALKAEPRFREMIDANPKIADLFRFAG
                     EIEGRNRHAGTHASAVVIANRPITDYCPLYRQATGEITTQYGMDPTARVGLVKFDFLG
                     LRTLTAIDDTLKLLKELRGIEIDPNDMELTDAETY"
BASE COUNT          458 a          760 c          819 g          367 t
ORIGIN      
        1 ggaagatccc cgacgtcggc ttcctcgcgc aggggaccct ctatccggac gtgatcgaga
       61 gcatatcgtt caaggggcct tccgccgtca taaaatccca ccacaacgtg ggggggctcc
      121 cggaacggat gcacctgaag ctcatcgagc cgctgcgcga gctgttcaag gatgaggtgc
      181 gcgagctggg gagggagctc ggggtgcctg cacgcgtgct cgaacggcag ccgtttcccg
      241 ggccgggtct ggcggtccgc atcatcggcc cggtcaccgg agagcggctg cgcatccttc
      301 gcgaggccga cgcgatcgtc gacgaggaga tccggggggc ggggctctac gagtcgatct
      361 ggcagtcgtt cgccgtcctt cttccgatca agacggtcgg cgtaatgggg gatttccgga
      421 cgtacgagaa cgtcgccgcc gtccgggcgg tccacagcca ggacgggatg accgccgact
      481 gggtgcggct tccgtacgac gtgctgcagc ggatctccac gcggatcatc aacgaggtga
      541 aggggatcaa tcgcgtcgcg tacgacatct cctcgaagcc cccgggcacc atcgagtggg
      601 aatgaagagc ttcgtccacc tccacctcca ttcggaatac agcctcctcg acgggacgat
      661 ccagttcaag ccgctgatcg agcgcgttaa gaagctttcg atgcccgccg tcgccgtcac
      721 cgatcacggc gggatgatgg ggacgatcga gttctacgaa gaggcgctga agggcggcgt
      781 gaagccgatc ttggggacgg agatctacgt cgccccggga tcccgcacgg agcggaaagt
      841 cgctcccaac ggcgaatacg cctaccacct gatccttctg gcggaaaacg ataccgggta
      901 ccgcaacctg atgcggctct cctccctcgc ccacacggaa gggttctact accgcccacg
      961 ggtcgacaag gagctgctgc ggagatactc ggaggggttg atcgccacgt cggcgtgcct
     1021 gcagggcgag gtcccgttcg caatggggac cgagggcgag gcgaaggcgc tcgaggcgct
     1081 ggaggagtac aagtcgatct tccccgacgg gcgtttctac ctcgagatcc aggacaacgg
     1141 ccttccagac caggagagga tgaacccgct cctcatcgcg ctggcgcgcc ggaccgggac
     1201 ccccctggtc gcgacgaacg actgccacta cctgaatccc ggggacgaca agctccagga
     1261 gatccttctc tgcctgcaga cggggaagac gatctcggat ccgacccgga tgcggttcgg
     1321 gtcggaccag ttctacgtga agaccgccga ggagttcgag cgcgcgttcg gtcacgtcgc
     1381 cccggacgcc ctcgcgaaca cgctggcgat cgcggagcgg tgcaacgtga agatcgagct
     1441 cggggtgaac aagatccccg agatcgcctt gccccccggg gtcaccgcgg acgggaagct
     1501 gcgggagatg gcgaccgcgg gactcgagcg gcgactcgag gagcgggcga agcgggaagg
     1561 ggaattggcg caagcgctgg tcgaggagta tcgacgccgc ctcgcgtacg agctctccgt
     1621 catcgagaag accgggttcg ccagctactt cctgatcgtc gccgacttca tcggctgggc
     1681 gaaagacgaa aagatcccgg tggggccggg ccgcggcagc gcggcgggga gcctggtcgc
     1741 gtactgcgtc cggatcaccg aggtggatcc gatccggtac aagctcctct tcgaacggtt
     1801 cctgaacccc gagcgggtga gcatccccga catcgactgc gacttctgca agaaccggcg
     1861 cgaggaagtg atcgcctacg tccagcgaac gtacgggacc gagaacgtcg cccagctcat
     1921 cacgttcggg acgtggaagc cccggggcgc ggttcgcgac gtcgggaggg tcctcgagat
     1981 gccgtacgcc gaggtcgacc ggatcgccaa gatgatcccg gccgacctca agatgacggt
     2041 ggaagacgcg ctgaaggcgg aaccgcggtt ccgggaaatg atcgacgcga acccgaagat
     2101 cgccgacctc ttccgcttcg cgggggagat cgaggggcgc aaccggcacg cggggaccca
     2161 tgcctcggcg gtcgtgatcg ccaaccggcc gatcaccgac tattgtccct tgtaccggca
     2221 ggccaccggc gagatcacga cgcagtacgg gatggacccg accgcgcgcg tggggctcgt
     2281 caagttcgac ttcctcggcc tgcgcacgct gaccgcgatc gacgacacgc tgaagcttct
     2341 caaggagctc cgggggatcg agatcgaccc gaacgacatg gagctcacgg atgcggagac
     2401 gtac
//
LOCUS       DATGYW010000191         2182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_168604, whole genome shotgun sequence.
ACCESSION   DATGYW010000191 DATGYW010000000
VERSION     DATGYW010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2182
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168604"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            47..1219
                     /locus_tag="VK429_02590"
     CDS             47..1219
                     /locus_tag="VK429_02590"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN90731.1"
                     /translation="MPDRARGGLVQGLLEDLRPIFTARMVLSAWIPCLVITVLHYRTG
                     AHHAWGHDILRRLYYLPILFAAFSGGLRGGVTVSVFASLVYLPHAFTSLLVQDPADAL
                     EKGLEILLYNIVAVVAGLLVDRERREREQQERLATRLGDALAEQRRIEAQLIRAGKLG
                     ALGEMTAGIAHEIKNPLHALKGTAEILRDAVPEGVPERRMLELHIEEIDRLGQVADRF
                     LSFARPLPASLRPVEPKSLVDRVVSLVATQARKEGVEMVVSADGAWGLPKVTGDPDLL
                     AQLLLNIALNGVQAMAPGGGGTLTFSLGAERQGGKGYVRVRVANTGPPVPEEDLERIF
                     DPFYTTKDGGTGLGLSICSRIADEHEGTLAVRNLPAGGGVEFSLSLPAAEGIDARR"
     gene            1206..>2182
                     /locus_tag="VK429_02595"
     CDS             1206..>2182
                     /locus_tag="VK429_02595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HLN90732.1"
                     /translation="MPDGNSLSEVHSTVSIPEARGFLRRLFAFAGPAYLVSVGYMDPG
                     NWATDIAAGSRYGYALIWVLLMSNLMAVLLQSLSARLGLVSGRDLAQACRDRYPPAVN
                     AALWVLCEVAIGACDLAEVIGSAIGLQLLFGLPLMYGVLITALDTFLILFLHQAGIRK
                     MEAFIIVLVATIAGCFLLEIVLSRPDLPGIARGFLPTFPDRDALYFAIGILGATVMPH
                     NLYLHSSLVQSRKVVKTANGIHRSLKYNTIDSVVALNIAFFINAAILVMAAAVFFRSG
                     HTDVASIEDAHRLLAPLVGSGLAPIVFAVALICAGQSSTITGTLAGQIV"
BASE COUNT          294 a          726 c          783 g          379 t
ORIGIN      
        1 cggcacatcc tcgtctaccg gatcggaaag tacgggcttc gccgcgatgc ctgaccgcgc
       61 gcgggggggg ctcgttcaag ggctgctgga ggacctgcgg ccgatcttca cggcgcggat
      121 ggtgctctcg gcgtggatcc cgtgcctcgt gatcaccgtc ctgcactacc gcacgggggc
      181 gcaccacgcg tgggggcacg acatcctccg ccggctctac tacctgccga tcctgttcgc
      241 ggcgttttcc ggcggcttgc ggggcggggt caccgtttcc gtgttcgcgt cgctggtcta
      301 cctcccgcac gccttcacga gcctcctggt gcaggacccg gcggacgccc tggagaaggg
      361 cctggagatc ctgctttata atatcgtggc ggtcgtcgcg ggactgctgg tcgaccggga
      421 gcgccgcgag cgggagcagc aggaacggct ggcgacccgg ctgggggacg ccctcgcgga
      481 gcagcggcgg atcgaggcgc agctgatccg cgccgggaag ctcggggcgc tgggcgagat
      541 gacggcgggg atcgcccacg agatcaagaa cccgttgcac gccctgaagg ggaccgcgga
      601 gatcctgcgg gacgccgtcc cggaaggggt gcccgagcgg cggatgctcg agctgcacat
      661 cgaggagatc gaccggctcg gccaggtcgc ggaccggttc ctctccttcg cgcggccgct
      721 cccggcttct ctgcggcccg tggagccgaa atcgttggtc gaccgcgtgg tgtcgctcgt
      781 ggcgacccag gcgcgcaagg agggagtgga gatggtcgtg tcggcggacg gggcctgggg
      841 actcccgaag gtgacggggg acccggacct gctggcccag ctcctgctga acatcgcgct
      901 gaacggggtg caggcgatgg ccccgggcgg cggcggaacg ttgaccttct ccctcggggc
      961 ggagcggcag ggaggaaagg ggtacgtgcg ggtgcgcgtc gcgaacacgg ggccgccggt
     1021 tcccgaggaa gatctggagc ggatcttcga cccgttctac accacgaagg acggcgggac
     1081 ggggctgggg ctctccatct gctcccgcat cgccgacgag cacgagggga ccctcgcggt
     1141 tcggaacctt ccggcgggag gtggcgtgga gttttccctt tccttgccgg cggcggaggg
     1201 gatcgatgcc cgacggtaac tccctctccg aagtccactc gaccgtgtcg atcccggagg
     1261 cgcgcgggtt cctccggcgt ctcttcgcgt tcgccggacc ggcgtacctc gtgtcggtcg
     1321 ggtacatgga cccggggaac tgggcgaccg acatcgcggc cgggtcgcgc tacgggtacg
     1381 cactgatctg ggtcctcctg atgtcgaacc tgatggcggt gctgctgcag tccctctcgg
     1441 cgcggctggg gctggtctcc ggcagggacc tcgcccaggc gtgcagggat cggtaccccc
     1501 ccgcggtgaa cgcggcgctg tgggtcctgt gcgaggttgc gatcggggcg tgcgacctcg
     1561 ccgaggtgat cggctccgcg atcgggctgc agctgctctt cggcctaccg ctgatgtacg
     1621 gggtcctcat cacggcgctg gacacgttcc tcatcctgtt cctccaccag gcggggatcc
     1681 ggaagatgga ggcgttcatc atcgtcctcg tcgcgaccat cgcgggctgc ttcctgctcg
     1741 agatcgtcct ctcccgcccg gaccttccgg ggatcgcgcg cggattcctg cctacgtttc
     1801 cggaccggga cgcgctgtac ttcgcgatcg gcatcctcgg ggcgaccgtg atgccgcaca
     1861 acctctacct tcactcctcc ctcgtccagt cgcgcaaggt cgtcaagacc gcgaacggga
     1921 tccaccggtc gctgaagtac aacacgatcg actcggtggt ggccctcaac atcgccttct
     1981 tcatcaacgc ggcgatcctg gtgatggcgg cggcggtctt cttccggtcg ggccacacgg
     2041 acgtcgcttc gatcgaggac gcccaccggc ttctcgcacc cctcgtgggg agcgggctcg
     2101 caccgatcgt ctttgccgtc gccctgatct gcgcgggcca gagctcgacg atcaccggga
     2161 cgctcgcggg gcagatcgtg at
//
LOCUS       DATGYW010000192         3208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_11121, whole genome shotgun sequence.
ACCESSION   DATGYW010000192 DATGYW010000000
VERSION     DATGYW010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3208
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11121"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(178..411)
                     /locus_tag="VK429_02600"
     CDS             complement(178..411)
                     /locus_tag="VK429_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011985888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90733.1"
                     /translation="MKVRVVCYEGYKAEETPRAFLLGERRVEVVRILDRWRGEDHEYI
                     KLDGSDGARYILRYDRSREGWEIRMMESPPSPG"
     gene            572..1180
                     /locus_tag="VK429_02605"
     CDS             572..1180
                     /locus_tag="VK429_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018963376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90734.1"
                     /translation="MGKGNLIKEAKSIVAIYLIIIGILGLAHTMEGRKKPMATEKQKE
                     AAKNNIKKAQAEWKAMSSTEHARSQPKGRARKKPGTTEEGKYYRIVVRSKEDFVTFRY
                     HDVGEPGGIQRLAGKRSSGSWDDQAWLISKEMAHMEGNTLVADTPDAKKILQVIGPAK
                     HVKGDIFQGHPRKNVPEREKPTPTQRRARMENIRKAQQARQK"
     gene            complement(1301..1385)
                     /locus_tag="VK429_02610"
     tRNA            complement(1301..1385)
                     /locus_tag="VK429_02610"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1349..1351),aa:Leu,seq:gag)
     gene            1534..>3208
                     /locus_tag="VK429_02615"
     CDS             1534..>3208
                     /locus_tag="VK429_02615"
                     /inference="COORDINATES: protein motif:HMM:NF015237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HLN90735.1"
                     /translation="MADEEAPRRGGLYRNAISLIGVLISGGSILLIIFALALEYSAKR
                     PSPYIGIFTYMLFPMFFGLGIAVFLYGMRHESLRRRSAGSEDALPYPLVDLNIPRHRK
                     RFVYITLGGTFLAIFMAFITYNAFLYSESVPFCGTLCHTVMQPEYTSYLASPHARVAC
                     VDCHVGHGASWYVKAKISGLRQVIAVATGSYPTPIPTPIENLRPARETCEECHWPAKF
                     FGTQLMQNPHFRYNEENTAEQISLGVKTGGGSSVLGGTAGIHWHMIIKNRVSYIATDR
                     QNQEIPYLEVRDQQGNLEEEYTSLDYKGTKEQLAALPKDIMDCMDCHNRPTHIYLPPD
                     TAVDRAMTTGLIPRTLPWVKKVVVDALVREYPTTEKAHEGLTAEIEGFYRQKYPSVFQ
                     ARKTDVDKAVAQAIAIFDRSVFPDMKVNWKTYTSNIGHRNWPGCFRCHDGRHVSKKGK
                     VLSMGCTECHTIPERGPLMPLGAVSPDRKMPWHPVQLQGKHARILCNKCHSAGYRPPS
                     DCAECHKFDTSAPMMKMACTDCHQKPGEAKPLTACKECHDKVRGLHGKGG"
BASE COUNT          743 a          999 c          911 g          555 t
ORIGIN      
        1 catcaaactg ggtgaattga cagtagccga ctgcgtggaa cggttcatcg tcgcccactc
       61 ggaagatcac ctcgagcaga ttcgcgcaac gctatcgggt tgaccatcta cgggtcctcg
      121 ctaattcgat tacgattccc atcgctgttg cgtccagcag ttcgatttca agggtgatca
      181 tcccggagat ggcggcgatt ccatcatccg gatctcccac ccctccctgg accgatcata
      241 ccggaggatg tagcgggcgc cgtcggagcc gtcgagcttt atgtactcgt gatcctctcc
      301 ccgccaccgg tccagaattc gtaccacctc gacccggcgc tccccgagca ggaaggcccg
      361 gggcgtctcc tccgccttgt acccttcgta gcaaaccaca cgaaccttca tgtcccgctt
      421 cccgcccctt accggttact tcgcctacgg ccccttgccc gatcaccaga gccagtatcc
      481 catttatttc acgatccaac gaaaaagggc caccccgtca aatccgtctc gacacatgga
      541 accggactgc cccggatgct cgtcttacgg attgggaaag ggaaatctca taaaggaggc
      601 gaaatccatc gtcgccatct atctcatcat catcggaatc ctcggactgg ctcacactat
      661 ggaagggagg aaaaaaccga tggctacgga gaagcaaaaa gaagctgcga aaaataatat
      721 aaagaaagcg caggcggaat ggaaagcaat gtcatcgacg gagcacgcaa gaagtcagcc
      781 gaagggacgg gcaagaaaaa aaccgggtac aacagaagaa ggaaaatatt atcgcatcgt
      841 cgttcgatcg aaagaggact ttgtcacctt cagataccat gatgtgggag aaccgggagg
      901 gatccagaga ttggcgggga aaagatccag cggctcctgg gacgatcagg cttggttgat
      961 cagcaaggag atggctcaca tggaagggaa cacgcttgtc gccgatactc ccgatgcaaa
     1021 aaagatattg caggtgatcg gaccggcgaa acatgtgaaa ggagacatct tccagggaca
     1081 tcccagaaaa aatgttcctg aaagggaaaa gccgacccct actcaaagac gcgcgcgaat
     1141 ggaaaatatt cgcaaagccc aacaggcgcg tcagaagtga gatagggagg gccaagggac
     1201 gatccgtgcc aagagtgtcc atgctgcggg ccacaaatca gccgctcagg ggctaaaaag
     1261 ggaacttggc acgaagccaa gttcccttta ggttttgcga tggtgccgaa ggcgggattt
     1321 gaacccgcac gggtttcccc accaccccct caagatggcg tgtctgccag ttccaccact
     1381 tcggcgcgtt gccgggagaa atatagtatc caccctcccg tcgaaaatca atacggggag
     1441 tccggcgatt tccgattcaa cgtttctctt ccaaaaccgc ccgcatccct gtactctttt
     1501 ccgggaaatc ttttacctta acgggggacg gtcatggcgg acgaggaagc gccgcgtcgc
     1561 ggcggcttgt accggaacgc gatcagtctt atcggagtgc tcatctccgg gggaagcatc
     1621 ctcctcatca tcttcgcact cgcgctcgag tacagcgcca agcggcccag tccctacatc
     1681 ggcatcttca cctacatgct gttcccgatg ttcttcggac tgggcatcgc cgtcttcctg
     1741 tacgggatgc ggcacgagag cctgcggcga cgcagcgcgg gaagcgaaga tgccctcccg
     1801 tatcccctcg tcgacctgaa catcccgagg cacaggaagc ggttcgtcta catcaccctc
     1861 ggaggaacgt tcctcgccat cttcatggcc ttcatcacgt acaacgcctt cctgtacagc
     1921 gaatccgtgc cgttctgcgg caccttgtgc cacacggtga tgcagcccga atacacgtcc
     1981 tacctcgcct ccccccatgc gcgcgtggcc tgcgtggatt gccacgtcgg gcacggcgcc
     2041 tcctggtacg tcaaggcgaa gatctcgggg ctgcgccagg tgatcgccgt ggcgacgggg
     2101 tcgtacccca cccccattcc caccccgatc gagaacctgc gccccgcgcg ggagacgtgc
     2161 gaggagtgcc actggcccgc caaattcttc gggacgcagc tgatgcagaa cccccacttc
     2221 cggtacaacg aggagaacac cgcggagcag atcagcctcg gcgtgaagac gggaggcggc
     2281 agttccgtgc tgggagggac cgccgggatc cactggcaca tgatcatcaa gaaccgggtc
     2341 agctacatcg caaccgaccg gcagaatcag gagatcccgt atcttgaggt ccgcgaccag
     2401 caggggaacc tcgaggagga atacaccagc ctcgactaca aggggaccaa ggagcagctc
     2461 gcggcgctac ccaaggacat catggactgc atggactgcc acaaccggcc cacgcacata
     2521 tacctccccc cggacaccgc cgtggaccgc gccatgacca cgggtcttat tccacggacg
     2581 cttccttggg tcaagaaggt ggtcgtggac gcgctggttc gcgaataccc cacgaccgaa
     2641 aaggcccacg aggggctcac cgccgagatc gaggggttct accgccagaa gtacccctcc
     2701 gtcttccagg cgcgcaagac cgacgtggac aaggcggttg cccaggcgat cgccatcttc
     2761 gaccggagcg tcttccccga catgaaggtg aactggaaga cgtacacttc caacatcggg
     2821 caccggaact ggccgggatg cttccgttgt cacgacggcc ggcacgtgtc caaaaagggg
     2881 aaggtcctca gcatggggtg cacggagtgc cataccatcc ccgagcgggg gccgctgatg
     2941 ccgttggggg ccgtctcccc ggacaggaag atgccgtggc accccgtaca actgcagggg
     3001 aaacatgccc ggatcctgtg caacaagtgc cactccgccg ggtaccgccc gccgtccgat
     3061 tgcgccgagt gccacaagtt cgacacctcc gcaccgatga tgaagatggc gtgcacggac
     3121 tgccaccaga agccagggga ggcgaagccc ctcaccgcct gcaaggagtg ccacgacaag
     3181 gttcgggggt tgcacggcaa aggaggcc
//
LOCUS       DATGYW010000193         3334 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_11147, whole genome shotgun sequence.
ACCESSION   DATGYW010000193 DATGYW010000000
VERSION     DATGYW010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11147"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            160..705
                     /locus_tag="VK429_02620"
     CDS             160..705
                     /locus_tag="VK429_02620"
                     /inference="COORDINATES: protein motif:HMM:NF025116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HLN90736.1"
                     /translation="MGHFSLSVVGKDRPGIVAEVSRVLFELGCNIEDSTCTILSGQFA
                     MILVIAHPKFSSAAEIDPFFDAVRKAMDLTVSLHALKEEEVSREKGFEGKPHIISVYG
                     ADRPGIVYSVARELARLKVNVTDLNTQVVGAKDRPVYMMVLEVDIPESVDMKELEREF
                     DKIRKELSVTISMRPIESLEL"
     gene            718..861
                     /locus_tag="VK429_02625"
                     /pseudo
     CDS             718..861
                     /locus_tag="VK429_02625"
                     /inference="COORDINATES: protein motif:HMM:NF013492.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
     gene            950..1228
                     /locus_tag="VK429_02630"
     CDS             950..1228
                     /locus_tag="VK429_02630"
                     /inference="COORDINATES: protein motif:HMM:NF013492.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HLN90737.1"
                     /translation="MLVLLNPEILAMGGKQIVREGCMSIPDYTANVQRAQWVLVDALG
                     RDGERKIIESIGFEAVAIQHEMDHLDGVLFLDRVVSVKTDLFRRKKYR"
     gene            complement(1235..1513)
                     /locus_tag="VK429_02635"
     CDS             complement(1235..1513)
                     /locus_tag="VK429_02635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90738.1"
                     /translation="MMKNRIVKALVIFFLYLSIYTYMCIGGVGMVLAFASPTAIMSMP
                     AWQSAAAGAASVACINGVCLFGNKLDRIHAAEQRTSGARAELLAAWRR"
     gene            complement(1864..2838)
                     /locus_tag="VK429_02640"
     CDS             complement(1864..2838)
                     /locus_tag="VK429_02640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90739.1"
                     /translation="MRRPFPALTVLFLLAAALASCGGGGGGTSSTSSPYTGVTTAAVI
                     TPTNADDIVRSSYLGVDASTAFVGPLSATTSETQDVSTASPPKVLSIVQVLKEISGKA
                     CDQRFTSERVAPKAVVSESGTLTDGYGGSVSYALSVDDQTGAFTGSFSASNYHGDGGG
                     TLSGAMTVSGTYDIAAGAFNSIDFKLNSVTVTDASSSVTVSGSVNLLNGNPATGTVTL
                     YLTDNVTDKTNWIEDFTITVTEGPGYADTTLSGKIYLHDYGYVVISTSTPFQFPAGST
                     YPSSGTMIVTGASNGRAKLTVSGSTGYTVDVDANGDGIYETSNLHTWQ"
     gene            complement(3047..>3334)
                     /locus_tag="VK429_02645"
     CDS             complement(3047..>3334)
                     /locus_tag="VK429_02645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90740.1"
                     /translation="MDKKKKERAIVAAKTAEFNQRNAQAMAVLKALRKKQTTHNNLTV
                     EEREFMHILEQTERLVQKGELLTRERARIQADAAMNFMTTPAWIEYLGDGR"
BASE COUNT          646 a          984 c          986 g          718 t
ORIGIN      
        1 cgggaaccgg atccggatcg tgtcggcggg gagcctcttt tccatcctgc cgcactgacc
       61 tggcggagac gccaaatcgc cgccgccgct tcccgcatcc ggggggcgtg gtatcatttc
      121 cattcggatc atccttacga cggaaggggg gccgcaggga tggggcattt ttcactgagc
      181 gtagtgggca aggaccggcc ggggatcgtc gcggaggtga gccgcgtcct cttcgaactc
      241 ggctgcaaca tcgaggactc cacctgcacg atcctctccg ggcagttcgc gatgatcctc
      301 gtgatcgcgc acccgaaatt ctcctcggcc gcggagatcg atcctttctt cgacgcggtg
      361 cggaaagcca tggacctgac ggtctccctg cacgcgctga aggaggagga agtctcccgg
      421 gaaaaggggt tcgaggggaa accgcacatc atctcggtgt acggcgcgga ccgtccggga
      481 atcgtctact cggtggcgcg ggagctggcc cggctcaagg tgaacgtgac cgacctgaac
      541 acccaggtgg tcggcgccaa ggatcgcccc gtctacatga tggtcctcga ggtggatatc
      601 cccgagagcg tcgacatgaa ggaactcgag cgcgaattcg acaagatccg gaaggagctc
      661 tccgtcacca tctccatgcg cccgatcgaa tccctggagt tgtagtccgg gttctccatg
      721 gccgtcctcc ccatccgcat ttttcccgac cccgtgctga aggagaaagc cgcccccgtc
      781 gaaggggtga ccgccgaggt gtcgtcgttc ctcgacgacc tgctcgagac gatgcggaat
      841 tcccccgggg gcgtggggat cgccgccccg caggtcggga tgcagcgtcg catcgtcatc
      901 gtcgacgttt ccgcgcaccg gcgcggggag ccaggagcag aaccacgggt tgctggtcct
      961 gctgaatccc gagatcctgg cgatgggggg gaagcagatc gtccgcgagg ggtgcatgag
     1021 catccccgac tacaccgcaa acgtccagcg cgcccagtgg gtgctcgtgg acgccctcgg
     1081 ccgcgacggc gagcggaaga tcatcgagtc gatcgggttc gaggcggtgg cgatccagca
     1141 cgagatggac cacctggacg gggtcctctt cctcgaccgc gtcgtgtcgg tgaagacgga
     1201 cctgttccgg cggaagaagt accgctgacc ccgcctaccg gcgccatgcg gcgagcagct
     1261 cggcgcgcgc cccgctcgtc cgttgctccg ccgcgtggat ccggtccagc ttgttcccga
     1321 agaggcagac cccgttgatg caggcgaccg acgccgcccc ggcggccgcc gattgccacg
     1381 cgggcatcga catgatcgcc gtcggcgagg cgaacgcgag aaccatcccg acccccccga
     1441 tgcacatgta tgtgtagatc gacaggtaga ggaagaagat gaccagcgct ttcacgatcc
     1501 ggttcttcat catgtcgatt ccctccgtcc ccggttaccc gttggatgcc gcggcgccaa
     1561 ctttctcttc gttggattag acgaagaaat ccagtattca ttcacgtatt tttcgggcac
     1621 gggggttgct ttagaattgg ataacggcgg ttcccatcgg gaatcgatgg gaatactgac
     1681 gtttatgtga tgatagattt cagaaatggg agtttatccg cgtagcaccg gcggggaagg
     1741 tggtcccctc cctccgccaa aggcgcggga tcaggcccgg aggcatcggg ggcattcaac
     1801 ccctcctgga attccccctc cgcctccggg cgcacctttt cccatcccct cccgttttta
     1861 tgctcactgc caggtatgga ggttggaagt ttcgtagatc ccgtctccgt tcgcatcgac
     1921 gtcgacggtg tagcctgtcg agccggaaac ggtgagtttc gcccttccgt ttgaagcccc
     1981 tgtgacgatc attgttccgc tggagggata ggtgctcccg gcaggaaact ggaaaggagt
     2041 cgaagtcgag atcactacgt atccgtagtc atgcagatag attttcccgg acaacgttgt
     2101 atccgcatac ccaggccctt ccgtcacggt gatcgtgaag tcttcgatcc aattcgtctt
     2161 gtcggtgaca ttatcggtca ggtacagggt taccgtaccc gttgccggat tcccgttgag
     2221 aaggttgacg gaacccgaga ccgtcacgct ggaagaagcg tccgtaaccg taaccgaatt
     2281 cagcttgaaa tcgatactgt tgaatgcgcc tgcggcaatg tcgtaggtgc cggaaaccgt
     2341 catggcgccg gagagggtac ccccgccgtc tccatgataa ttgctggccg agaacgatcc
     2401 cgtgaatgcc cccgtctggt cgtcaacgga caaggcgtaa gagacgctgc cgccgtatcc
     2461 gtcggtaagc gtgccgcttt cactgacgac tgccttgggg gcgactcttt ccgatgtgaa
     2521 tcgctggtcg caagcctttc cggagatctc tttcagcact tgcacgatgg agagaacttt
     2581 tgggggactg gccgtggata cgtcctgtgt ttcgctggtg gtggcactga gtggccccac
     2641 aaacgcagta ctggcatcga ctcccaggta tgaacttcgg acgatatcat cggcgttcgt
     2701 cggtgttatt accgccgcgg ttgtaacccc ggtataaggc gaagaggtgg aagaagtgcc
     2761 gcccccaccc ccaccacatg aggcaagtgc cgctgcgagc agaaaaagta cggttaacgc
     2821 cgggaaaggc ctccgcatac gacctccttg acatctacgg atagattttc cgcccttcgt
     2881 gccatctctc atggtttcct caagatcttc ttgaatttat cgagcgtttc atttattgca
     2941 gactgtttga aacaaaggaa aatgacaaag gcagggaaca gaactattac aagaaatgca
     3001 ccaatggatt cggaatccaa ttcagacata ttttattcct tgtttcttat cgtccatcgc
     3061 ccaagtattc gatccatgct ggcgtggtca tgaagttcat tgccgcatca gcctgaatac
     3121 gagcacgctc cctggtcaac agttcacctt tttgaacgag gcgttccgtc tgctcaagga
     3181 tgtgcataaa ctcgcgttct tcaacagtga ggttattatg ggtggtctgc ttctttctaa
     3241 gcgctttcag gaccgccatc gcttgtgcat tgcgctggtt gaactcggcc gttttggcgg
     3301 ccacgatggc acgttccttc ttcttcttat ccat
//
LOCUS       DATGYW010000194         2345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_335986, whole genome shotgun sequence.
ACCESSION   DATGYW010000194 DATGYW010000000
VERSION     DATGYW010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335986"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..615)
                     /gene="atpH"
                     /locus_tag="VK429_02650"
     CDS             complement(73..615)
                     /gene="atpH"
                     /locus_tag="VK429_02650"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012439.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit delta"
                     /protein_id="HLN90741.1"
                     /translation="MIGGSLARRYARALRDIGQEDRQVRQVLSEVEEFARLLDLSPGL
                     REVLEAGHVNRRDKQSALDQVLSKAGFLPSTKSFLSLLVDKGRMNVLLPIVGELRRMV
                     EELEGIERVGVSVPMAMSPPQKEQLKEILERRTGKKIVLEETVDPAVLGGLVVRVGST
                     VYDGSVRTQIRQIRENLQKG"
     gene            complement(612..1223)
                     /locus_tag="VK429_02655"
     CDS             complement(612..1223)
                     /locus_tag="VK429_02655"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit B"
                     /protein_id="HLN90742.1"
                     /translation="MSPRRTSACRALRVVTPFAASLCAGAIAFAAGEGGAPQGGGVHI
                     PWGEIIKQAINFLILAGVLVYFLRKPFTSFLKERSDLLRKSIDDAAKARAEAAEKLSA
                     IETRTAKLADEIAGMNEKMDVEAAAEARRLKETATVEIFRIRAQSEFTGEQEVKKARE
                     ELRREAALLSARAAEELVRKTLSPEDQERLLRENLEKIEGIVH"
     gene            complement(1220..1675)
                     /locus_tag="VK429_02660"
     CDS             complement(1220..1675)
                     /locus_tag="VK429_02660"
                     /inference="COORDINATES: protein motif:HMM:NF012645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit B"
                     /protein_id="HLN90743.1"
                     /translation="MELVSKIFETLEISQLALLQLGLVVVLAFLLSTLLIKPILRTFE
                     ERENLSVKPIEESRRLLSEADEKAKGYDEALRKGAAEALARKRRVMEETSRAGRREIE
                     AVVEETNLNVEKLKGRIAAEKESAAALLRSQVSFLSTEIARKVLGRPVA"
     gene            complement(1857..2048)
                     /locus_tag="VK429_02665"
     CDS             complement(1857..2048)
                     /locus_tag="VK429_02665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90744.1"
                     /translation="MRKYLSMMFVLMLAATIGLSACAKKEEPPPPPPPAPAAAPAMPA
                     DNMAPAAPAAPAPAEAPKK"
BASE COUNT          400 a          772 c          722 g          451 t
ORIGIN      
        1 ttctcgtacc ccttgatctg gcttttcagg atctcggtaa tctcttccgc gcggatgctc
       61 atggcgactg cctcacccct tttgtaaatt ttcccggatc tgccggatct gcgtgcgcac
      121 gctgccgtcg tacacggtcg accccacccg gacgacgagc cccccgagca ccgcgggatc
      181 cacggtctcc tccagaacga tcttcttccc cgtccgccgc tccagtatct ccttcaactg
      241 ctccttctgc gggggagaca tcgccatggg aacggagacc ccgacccgct cgatcccctc
      301 gagctcctcc accatgcgcc gcaattcgcc gacgatcgga aggagcacgt tcatccgccc
      361 cttgtcgacc agaagggaaa ggaacgattt cgtggatggg aggaacccgg ccttggagag
      421 gacctggtcg agagcgctct gcttgtcccg gcggttgacg tgtccggcct cgagcacctc
      481 gcgcagtccg ggggacagat cgagaagacg ggcgaactcc tcgacctccg agagcacctg
      541 gcggacctgc cggtcctcct ggccgatgtc ccgcagcgcg cgggcgtacc gtcttgcgag
      601 gcttccgccg atcaatggac gatcccctcg atcttctcga gattctcacg gagcagccgc
      661 tcctgatcct cgggggacaa ggtctttctt acgagctcct cggcggcgcg ggccgaaagg
      721 agggccgcct cccggcgcag ctcctcgcgg gccttcttca cttcctgctc gccggtgaac
      781 tccgactggg cgcggatccg gaatatctcg acggtggcgg tttccttcag gcgccgcgcc
      841 tctgcggcgg cttcgacgtc catcttctcg ttcatccccg cgatctcgtc ggccagtttc
      901 gcggtgcggg tctcgatggc ggacagcttc tccgccgcct ccgcgcgggc cttcgccgcg
      961 tcgtcgatcg acttgcgcag cagatcgctt cgctccttga gaaaggatgt gaacggcttg
     1021 cgcaggaaat agacgagcac cccggcgagg atgaggaagt tgatcgcctg cttgatgatc
     1081 tctccccagg ggatgtggac gccgcctcct tgcggagcac cgccctcccc cgcggcgaac
     1141 gcgatcgcgc cggcgcacaa ggatgctgca aagggggtga cgacgcgcaa cgcgcggcat
     1201 gcggaggttc gccgggggct catgcgaccg gcctcccgag gactttccgg gcgatttccg
     1261 tggagaggaa cgacacctgg gagcgcagga gcgcggcggc cgattccttc tcggcggcga
     1321 tccggccctt caatttttcg acgttcaggt tcgtctcctc gacgacggct tcgatctccc
     1381 tgcgtccggc gcgggaagtc tcttccatga cccgacgctt ccgggcgagc gcctcggccg
     1441 cacccttgcg gagcgcctcg tcgtacccct tggccttttc gtcggcctcg gacaggagcc
     1501 ggcgggattc ctcgatcggc ttcaccgaga ggttctcccg ctcctcgaac gtgcggagga
     1561 tcggcttgat gaggagggtg gaaagcagga atgcaaggac gaccaccagc cccagctgga
     1621 gcagggcaag ctgggagatc tccaacgtct cgaaaatctt gcttacaagt tccatgaaac
     1681 cggcactccc ccgagggcgg actggtctac ggaaggacat ctacaagaga aacggaagat
     1741 tggtaccacg cccgccgcgg aactgtcaag ggcttcttga cggtcggagg ggtacgaaat
     1801 gagaagggcg ccggggaagc cccgacgccc ttcctggtgc cttgctgccc gggaaactac
     1861 ttcttgggcg cttcagccgg agccggtgct gcgggtgcgg ccggtgccat gttgtcggca
     1921 ggcatggcag gcgcggcggc cggagccggc ggcggcggcg ggggcggctc ttccttcttc
     1981 gcacaagcgg agaggccgat cgtcgcggcc agcatcagca cgaacatcat tgacagatac
     2041 ttgcgcattg gttctcactc ctttcccttg gaatttatcc gtattcgcgg ataattcaac
     2101 gtttgagtat aaggcgcaat atagcatagg gaaatcgggt tgcaatactt tttttgcaac
     2161 agcgaaattt tttctctgtc gccctggcgg cagcaaaccc gcgtctacga ccgtcaacgg
     2221 ccactgaaca gaatatcgca gaggcgatcg agctcctccg acgagaagta ggagatctct
     2281 atacgcccct tcttcaacga accgcgcagc cgcacccgcg tgcccccgcg gcgggagagg
     2341 tcctc
//
LOCUS       DATGYW010000195         1785 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_232041, whole genome shotgun sequence.
ACCESSION   DATGYW010000195 DATGYW010000000
VERSION     DATGYW010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_232041"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..159)
                     /locus_tag="VK429_02670"
     CDS             complement(<1..159)
                     /locus_tag="VK429_02670"
                     /inference="COORDINATES: protein motif:HMM:NF013811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate mutase"
                     /protein_id="HLN90745.1"
                     /translation="MGGKYIILIGDGMADWPIPAIGNRTPLEAAEKPNMDFMAANGAV
                     GMVQVVPKE"
     gene            complement(171..1226)
                     /gene="thrC"
                     /locus_tag="VK429_02675"
     CDS             complement(171..1226)
                     /gene="thrC"
                     /locus_tag="VK429_02675"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014809553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HLN90746.1"
                     /translation="MHWQGIIRHYGRFFTSVPEEAIVTLLEGNTPLVPAPALARRIAP
                     GTELFLKYEGLNPTGSFKDRGMTMAVSKAKADGSDSVICASTGNTSASAAAYAARAGM
                     RAFVLIPEGKIALGKLSQAMIHGAQVLQVLGNFDDALSLVKEVSAKYPVTLVNSLNPY
                     RIEGQKSAAFEIVDALGDAPEYHILPVGNAGNITAYWAGYKEYRAAGKSSRLPAMLGW
                     QAEGAAPIVRGAPVPKPETVATAIRIGNPASWRQAEAARDESGGLIRMVSDAEILEAY
                     KMVAETEGIFCEPASAASIAGVIKLGTEGFFRAGQRLVCTLTGHGLKDPDNAIAQSVA
                     PVTIPPVLGDVLRILGF"
     gene            complement(1248..>1785)
                     /locus_tag="VK429_02680"
     CDS             complement(1248..>1785)
                     /locus_tag="VK429_02680"
                     /inference="COORDINATES: protein motif:HMM:NF013962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HLN90747.1"
                     /translation="GIEARVHPTMIPSHSPLGMVDGAYNAIYVKGDFVGSSLSYGQGA
                     GMLPTASAVVSDVIELARNLRRGCAGRIPPGGFFLADPSLRADLAPIDQVHSEYYLKF
                     HVVDKPGVLSRIAGVLGSHAISIASVLQKGQGQSAVPIFIVTHRAKESDMRAALAEVD
                     RLPDVLDRTRMIRIENNL"
BASE COUNT          284 a          607 c          567 g          327 t
ORIGIN      
        1 ctccttcggc acgacctgta ccatcccgac ggcgccgttt gccgccatga agtccatgtt
       61 cggtttctcc gctgcctcga gcggcgtgcg gttgccgatc gcggggatcg gccagtccgc
      121 catgccgtcg ccgatcagga tgatgtattt cccacccatc gtcgtctcct tcagaaaccg
      181 aggatcctca ggacgtcccc gagaacggga gggatcgtca ctggcgcgac cgactgcgcg
      241 atggcgttgt ccgggtcctt caggccgtgc ccggtcagcg tgcaaacgag ccgctgcccg
      301 gcgcggaaaa acccctcggt ccccaatttt atcacgccgg cgatcgaggc ggccgacgcg
      361 ggctcgcaga agatcccttc cgtttcagcg accatcttgt acgcctcgag aatctccgcg
      421 tcgctcacca tgcggatgag tcccccggac tcgtcgcgtg cggcttccgc ctgtctccac
      481 gacgcggggt tgccgatgcg gatcgcggtg gcgaccgtct cgggcttcgg tacgggggct
      541 ccgcggacga tcggggccgc cccttccgcc tgccagccga gcatcgcggg gaggcggctc
      601 gacttcccgg cggcccggta ctccttgtac cctgcccagt acgcggtgat gtttcccgcg
      661 ttccccaccg gaaggatgtg gtattcgggc gcgtccccga gcgcgtcgac gatttcgaac
      721 gcggccgact tctgcccttc gatcctgtac ggattcagtg agttcaccag cgtcacggga
      781 tatttcgcgg agacctcctt gaccagggaa agggcgtcgt cgaagttgcc cagcacctgc
      841 agtacctgcg ctccgtggat catcgcctgg gagagtttcc ccagagcgat cttcccctcg
      901 gggatgagca cgaacgccct catcccggcg cgtgcggcgt aggcggccgc ggaggcggac
      961 gtgttcccgg tggaagcgca gatgaccgaa tcggaaccgt ccgccttcgc cttcgagacg
     1021 gccatcgtca tcccgcggtc cttgaaggaa ccggtcggat tcaatccctc gtacttgagg
     1081 aacagctcgg ttcccggagc gatcctccgg gccagcgcag gggccgggac aaggggggtg
     1141 ttcccctcca ggagcgtgac gatcgcctcc tcggggacgg aggtgaagaa ccgcccgtaa
     1201 tggcggatga ttccttgcca gtgcatttcg cctcggttcc ttttatccta gagattgttt
     1261 tcgatccgga tcattcgcgt ccggtcgagg acgtcgggga ggcggtccac ctcggccagc
     1321 gccgcccgca tgtcgctctc cttcgcccga tgcgtcacga tgaagatggg aaccgcggac
     1381 tgcccctgcc ccttctggag aacggaagcg atgctgatcg catggctccc cagaaccccc
     1441 gcgattcgcg agagaacgcc gggcttgtcc accacgtgga atttcaggta gtactcgctg
     1501 tggacctggt cgatcggagc gagatcggcc cggagcgacg gatcggcgag gaagaacccc
     1561 ccgggcggta tccggcccgc gcatccccgg cgaaggttcc gcgcgagctc gatcacatcg
     1621 ctcactaccg ccgacgccgt cgggagcatc cccgcgcctt gcccgtacga aagggaggaa
     1681 ccgacgaaat cccccttcac gtagatcgcg ttgtaggcgc cgtcgaccat ccccaggggg
     1741 gaatgggacg ggatcatcgt cgggtggacc cgcgcctcga tcccc
//
LOCUS       DATGYW010000196         1666 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_232128, whole genome shotgun sequence.
ACCESSION   DATGYW010000196 DATGYW010000000
VERSION     DATGYW010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_232128"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /locus_tag="VK429_02685"
     CDS             complement(<1..308)
                     /locus_tag="VK429_02685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006964346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA N-acyltransferase"
                     /protein_id="HLN90748.1"
                     /translation="MAGIEIVVVEGGSGLKDFIDLPWNLYAEYPRWVPPLKKEVRRLL
                     DPRRHPFWSSAERQLFLARRGSQAVGRIAGIIDRRYNEFHGEQMGIWGFFECADDPAA
                     A"
     gene            complement(556..>1666)
                     /locus_tag="VK429_02690"
     CDS             complement(556..>1666)
                     /locus_tag="VK429_02690"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HLN90749.1"
                     /translation="LRENLSFAAEVACKEFRKGDLAVSDLKLRVEGKDGRYAIRPVTA
                     ARLVYSGPGGKVEADRIALGVDNLAVGDDGKHDLLRRISFSGTAGIGEFRADNIVITD
                     LKAPMAGKDGVLDLDPVTMRLFGGQGSGSLRADLSGPVPNYNVRYSLSRFRIEEFFKA
                     LSPKKVAEGSMDFSSSLSTRGKTANEMTRNANGEFSLRGESLTLDGVDLDRTFSRYEA
                     SQNFNLVDVGAFFIAGPFGPLITKGYNFGSIFVGSGGSSRIRVLVSGWKVERGIAQAK
                     DVAMATNENRIALVGSLDFVNERFNDVTVAVVDGEGCAKVRQKIRGPFRKPEVEKASV
                     LKTAAGPILSVFKQAGKLLGGPCEVFYAGSVAPPK"
BASE COUNT          318 a          539 c          481 g          328 t
ORIGIN      
        1 gctgccgccg gatcgtcagc gcattcgaag aatccccaaa ttcccatctg ttcgccatgg
       61 aactcattat agcgtcgatc gatgatgccc gcgatcctgc ccaccgcctg cgaaccgcgc
      121 cgggccagaa aaagctggcg ctcggcagac gaccagaaag ggtgccggcg gggatccagc
      181 agccggcgaa cctccttctt aaggggagga acccatctgg ggtattcggc atagagattc
      241 caggggagat cgatgaagtc cttcagcccc gaacctcctt ccacaacaac gatctcgatg
      301 ccggccatga gcgttccgtt tgagacggga ttttccatag gactgtcatc tcacgatcat
      361 ggtagatcaa atgttttagg ctattccatt tccgctccgt acttcaaccc caatttgggc
      421 gatgcccttg aagttacccc ctgtttggtg ggagacgccg gtgcattccc atcaatgcaa
      481 aggtcggcgg aaatcgatgg atataggccg gatgaagttg aaaatgcgga ataatattag
      541 cggtttgttc tttctttatt tcggcggcgc caccgagccg gcgtagaaca cttcgcacgg
      601 ccccccgagg agctttccag cctgcttgaa cactgagaga atcggccccg cagcggtttt
      661 caggacgctc gccttctcca cctccggttt ccggaaaggg ccgcggatct tctggcgcac
      721 cttggcgcat ccctccccgt cgaccaccgc cacggtgaca tcgttgaacc gttcgttgac
      781 gaaatcgagg ctccccacga gcgcgatccg gttctcgttc gtcgccatcg ccacgtcctt
      841 cgcctgcgcg atgccgcgtt ccaccttcca gccggagacg agcacacgga tcctgctgct
      901 gccgccggat cccacgaaga tgctcccgaa gttatatccc ttcgtgatca gcgggccgaa
      961 ggggccagcg atgaagaagg cgccaacgtc gacgaggttg aagttctggc tggcttcgta
     1021 tcgagagaac gtgcggtcga ggtcgacgcc gtcgagcgtc aggctctcgc cccgaaggga
     1081 gaactcgcca ttcgcgttcc gcgtcatctc gttcgcggtc tttccccgcg tcgacaggct
     1141 cgaggagaag tccatcgacc cttccgcgac cttcttcggc gacagggcct tgaagaactc
     1201 ctcgatccgg aacctcgata gggaataacg gacgttgtaa ttggggacgg ggcccgaaag
     1261 gtccgcccgg aggctccccg acccttgccc tccgaagagg cgcatcgtga ccggatcgag
     1321 atcgaggacg ccgtccttcc cggccatggg agccttcagg tcggtgatga cgatgttatc
     1381 tgcccggaac tccccgatcc cggcggtccc cgaaaaagaa atcctgcgga gaaggtcgtg
     1441 ctttccgtcg tccccgacgg cgaggttgtc cacgcccagg gcgatccgat ccgcctccac
     1501 tttcccgccg gggccggaat agacgagccg ggccgccgtg acggggcgga tcgcataccg
     1561 tccgtccttc ccctcgaccc ggagtttcag gtccgagacc gccaggtccc ccttgcggaa
     1621 ctccttgcag gcgacctccg ccgcgaagga aaggttctcc cggagg
//
LOCUS       DATGYW010000197         3335 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_446674, whole genome shotgun sequence.
ACCESSION   DATGYW010000197 DATGYW010000000
VERSION     DATGYW010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3335
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446674"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..142)
                     /locus_tag="VK429_02695"
     CDS             complement(<1..142)
                     /locus_tag="VK429_02695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008137042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN90750.1"
                     /translation="MALLELDSINTFYGRSHILFDVSLAVEKGEVVSLVGRNGAGKST
                     TFR"
     gene            complement(157..912)
                     /locus_tag="VK429_02700"
     CDS             complement(157..912)
                     /locus_tag="VK429_02700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019461883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN90751.1"
                     /translation="MAFLQVSGVVKSFGGLRALQDVSFSVERGEIRAIIGPNGAGKST
                     LFNVMTGLFPPNSGDVLFDGERISGVPPHRIIRKGIGRSFQITNIFPRMTVFENVQVA
                     LFSHHGKSRNAFGFARRYPTVAAEALAILGQVGLGEKHEMSASILSHGDQKRLEIAIS
                     LASRPRLLMLDEPTAGMSRFESRETVELLRTISREQGLTLVFTEHDMDIVFGISEKIV
                     VLQQGSVIADGAPAEIKANPQVRKAYLGEEIQE"
     gene            complement(894..2813)
                     /locus_tag="VK429_02705"
     CDS             complement(894..2813)
                     /locus_tag="VK429_02705"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLN90752.1"
                     /translation="MAASIDLSFLTVQVLSALRQAAFLFLISSGLTLIFGVLNILNFA
                     HGALYMLGAYFIYALTLHLTGPAGFVIALLAAPLGVALVAVVIEMGLLRRIYVQEEIY
                     QLLLTYSLVLIIDDLAKIVFGPEYKSIPKPDIISGAVTIFGGTVPVYTLVVLVLAPAM
                     ALVLWYLLYKTRTGKVVRATSSDREMADALGINMSALFTLVFAFGAVLAGFGGALAGP
                     ARTVFPGVGTEVIIESFVVVVIGGLGNLWGALIGSILIGTLETVGIIVFPEFEMSLIY
                     LLMVAILVVRPWGLFGRPLKVKALSDKNLSMEAQEISPVHFSIHPAIRLIPLLLLLIV
                     PLVAGRFYQFLLTQILIASLVAVAFNLLLGTTGLLSFGQMAFYGVGAYTFGLLVMKAG
                     FGTLPALLLSPVFAALAAGVIGFFCVRLTGVHFAMLTLAFGQLVYTIAFKWYGFTGGD
                     NGIQGIPIRPLPGGIDIGSTKAMYYFALAAVGISVECLRRIRSSPFGATLKAIRENSQ
                     RAAYLGVNVKLYQWMAFVIAGAFTGLAGGLYAVMEKAITPDIIHWTKSGEPVFMTIIG
                     GIYTFAGPVVGAAVFVVLNSYLVAWTEKWALVLGIILLVMVLLLPGGVVGFINEKARG
                     ALSKRGWVRKWLFSK"
     gene            complement(2891..>3335)
                     /locus_tag="VK429_02710"
     CDS             complement(2891..>3335)
                     /locus_tag="VK429_02710"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN90753.1"
                     /translation="DVALARAMGKEMPTGIIADQRYYFHWPNSKKNQDFVKAYMAKNN
                     EYPSAWAAQGYDGVYFLAEAIRKAGSLDKEKVIAALEGLTIDAPRGKATLRKEDHQLF
                     ADYMVGETGFDKNYPIAIVTKTEVFPADKVIYSLAEWKKAQESNK"
BASE COUNT          633 a         1087 c         1068 g          547 t
ORIGIN      
        1 agcggaacgt ggtgcttttc cccgccccgt tgcgcccgac gagggagacg acctccccct
       61 tttccaccgc gagagatacg tcgaagagga tgtggctgcg tccgtagaac gtgttgatgg
      121 aatcgagctc gagcagcgcc atcgggatcc ccgttcctac tcctggattt cttcgcccag
      181 gtacgccttg cgtacctggg ggttcgcctt gatctccgcc ggcgccccgt cggcgatcac
      241 cgacccttgc tgcagcacca cgattttttc ggagatgccg aagacgatgt ccatgtcgtg
      301 ctcggtgaac acgagcgtaa gcccctgctc ccgcgagatg gtccgcagca gttccaccgt
      361 ctcccggctc tcgaacctgg acatccccgc cgtcggctcg tcgagcatca ggagacgggg
      421 ccgcgaggcg agagagatgg cgatctcgag ccgtttctgg tcgccgtggg aaaggatcga
      481 ggcggacatc tcgtgcttct cccccagccc cacctgtccg aggatggcca gcgcctcggc
      541 ggcgacggtc gggtaccggc gcgcgaaccc gaacgcgttg cggctttttc cgtggtggga
      601 gaagagcgcc acctggacgt tctcgaagac cgtcatccgc ggaaagatgt tggtgatctg
      661 gaaggagcgt ccgatccctt tccggatgat ccggtggggc gggaccccgg aaatcctctc
      721 cccgtcgaag aggacatccc cggagttggg ggggaacagg ccggtcatca cgttgaacag
      781 ggtcgacttc cccgccccgt tcgggccgat gatcgcgcgg atctcgcccc gctccaccga
      841 gaaggagacg tcctggagcg cgcgcagacc cccgaacgac ttgacaacgc cgcttacttg
      901 gagaaaagcc atttccgcac ccatccccgt ttcgacaagg cgccccgcgc cttctcgttg
      961 atgaaaccga cgacgccgcc cgggagcagg aggaccatga cgaggaggat gatccccagc
     1021 acgagcgccc acttttcggt ccacgccacc aggtacgagt tcagcacgac gaagaccgcc
     1081 gcgccgacca ccggtcccgc gaacgtgtag atcccgccga tgatcgtcat gaacaccggt
     1141 tcgcccgact tggtccagtg gatgatgtcc ggggtgatcg ctttttccat gacggcgtac
     1201 agcccgccgg caagccccgt gaaggcgccg gcgatcacga aggccatcca ctggtacagc
     1261 ttcacgttca ccccgaggta cgccgcccgc tggctgttct cgcggatcgc cttgagggtg
     1321 gccccgaagg gcgaggagcg gatccgccga aggcactcca cggagatccc caccgcggcg
     1381 agggcgaagt agtacatcgc cttcgtggag ccgatgtcga tccccccggg gagcggccgg
     1441 atggggatcc cctggatgcc gttatccccc ccggtgaagc cgtaccattt gaacgcgatc
     1501 gtgtacacga gctggccgaa cgccagcgtc agcatcgcga agtgcacccc cgtcaggcgg
     1561 acgcagaaaa aaccgatcac gcccgccgcc agagcggcga agacggggga gagcagcagc
     1621 gcggggaggg tgccgaatcc cgccttcatc acgaggagcc cgaaggtata ggcccccacg
     1681 ccgtagaagg ccatctggcc gaaggagagg agcccggtgg tccccagcag gaggttgaaa
     1741 gcgaccgcca ccagggacgc gatcaggatc tgggtcagca ggaactggta gaacctgccc
     1801 gcgacgaggg gaacgatcag caggaggagg agagggatca ggcggatcgc cgggtggatg
     1861 gagaagtgga ccggggagat ctcctgggcc tccatgctca ggttcttgtc ggagagcgcc
     1921 ttcaccttga ggggtcgccc gaagagcccc cagggccgga cgaccaggat cgcgaccatc
     1981 agcaggtaga tgagggacat ctcgaattcg gggaagacga tgatcccgac cgtttccagc
     2041 gtcccgatca ggatcgaacc gatgagcgcc ccccagaggt tccccagtcc cccgatgacc
     2101 accacgacga acgactcgat gatgacttcg gtccccacgc cggggaagac ggtacgggcc
     2161 gggccggcga gcgccccccc gaacccggcc agcactgcgc cgaaggcgaa caccagcgtg
     2221 aagagggcgg acatgttgat cccgagggcg tcggccatct cccggtcgga agaggtggcc
     2281 cggacgacct ttcccgtccg ggtcttgtag aggaggtacc acagcaccag cgccatcgcc
     2341 ggcgccagca ccagcacgac aagggtgtac accggcacgg tccccccgaa gatcgtgacc
     2401 gccccggaga tgatgtcggg cttcgggatc gatttgtact ccgggccgaa gacgatcttc
     2461 gccaggtcgt cgatgatgag gaccagggag taggtaagca ggagctggta gatctcctcc
     2521 tggacgtaga tgcggcgcag cagccccatt tcgatgacca ccgcgacgag ggcgactccc
     2581 agcggggcgg ccagcagagc gatcacgaat cccgcagggc cggtcaggtg cagcgtcagg
     2641 gcatagatga aatacgcccc gagcatgtac agcgcgccgt gggcgaagtt caggatgttc
     2701 aggacgccga agatcagcgt gaggccggag gagatgagga agaggaacgc cgcctgtcgg
     2761 agggcgctca atacctgcac cgtcaggaac gacaggtcga tggatgccgc cattccgttt
     2821 cccttcgagt ggattgaacg gggccgcccc gacggcggcg gtccccgttg ctatccaagc
     2881 cttgcgggcg ctacttgttc gactcctgcg ccttcttcca ctcggccaaa gagtaaatca
     2941 ccttgtccgc cgggaagacc tcggtcttcg tgacgatcgc gatcgggtag ttcttgtcaa
     3001 acccggtctc cccgaccatg tagtcggcga acaactggtg gtcctccttc cgaagcgtcg
     3061 ccttcccgcg cggggcgtcg atggtcaacc cttccagcgc cgcgatgacc ttctccttgt
     3121 ccagcgaccc cgccttccgg atcgcctcgg cgaggaagta gacaccgtcg tatccctgcg
     3181 cggcccaggc gctcggatac tcgttgttct tcgccatgta cgccttcacg aagtcctggt
     3241 tcttcttgct gttcggccag tggaagtagt accgctgatc ggcgatgatg ccggtgggca
     3301 tctccttccc catcgccctt gcaagcgcaa catcc
//
LOCUS       DATGYW010000198         1582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_447139, whole genome shotgun sequence.
ACCESSION   DATGYW010000198 DATGYW010000000
VERSION     DATGYW010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447139"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1582
                     /locus_tag="VK429_02715"
     CDS             <1..>1582
                     /locus_tag="VK429_02715"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HLN90754.1"
                     /translation="ILDDIFIRKDAAQLTYIPLLVLAIYLVRGGLEFTQSYLMAGVGQ
                     RVVRDIREHLYRHLQSLSLSFYLRHSTGVLMSRVLNDVGLMQSAITDAATGLIKDIFT
                     AAFLVFVIFYRDWKLALIALVVFPLAFWPIARFGRKLRRTSVKAQEITGGLSSHLQET
                     ISGAKLVKSFGAESYETERFSIRNNELFRLSMKVVKVQAMTSPLSEMFAGVGAAAVIY
                     YGGHSVVNGHSTAGNFFSFITALFMLYEPVKRLSRINNVVQQGLAAGGRVFEVIDTLP
                     EVREAEGAVPLAPITKEISFDRVDFQYAPGGETVLKEIDFRVPAGTMVAIVGSSGAGK
                     TTLVDLIPRFYDPQEGAIRIDGVDIRGVTLASLREQIGIVSQHTVLFNDTVRNNIAYG
                     MPAAPMEKVVEAARRANAHLFIERMPEGYATVVGEQGLRLSGGERQRLAIARALLKDA
                     PLLILDEATSALDTESEHVVQEALDTLMRGRTTFVIAHRLSTVRNADVIFVVEDGRIV
                     ERGRHEDLLSVESRYRSFY"
BASE COUNT          254 a          541 c          513 g          274 t
ORIGIN      
        1 atcctcgacg atatcttcat ccggaaggac gccgcgcagc tgacgtacat cccgctcctg
       61 gtgctggcga tctacctcgt ccgcggcggg ctcgagttca cccagagcta cctcatggcc
      121 ggggtggggc agcgggtcgt acgggacatc cgcgagcacc tctatcgcca cctgcagtcg
      181 ctgtcgctct cgttctacct gcggcactcc accggggtgc tcatgtcccg cgtcctgaac
      241 gacgtaggac tgatgcagag cgcgatcacc gacgccgcca ccgggctcat caaggacatc
      301 ttcaccgcgg cgtttctcgt tttcgtcatc ttctaccgcg actggaagct ggcgctcatc
      361 gccctcgtcg tcttcccgct cgccttctgg ccgatcgccc gcttcggccg gaagctgcgg
      421 cggacgagcg tcaaggcgca ggagatcacg ggggggctct cgtcccatct gcaggagacg
      481 atcagcgggg cgaagctcgt gaagtcgttc ggggccgagt cctacgagac ggagcggttc
      541 tccatccgga acaacgaact cttccgcctc agcatgaagg tcgtgaaggt ccaggcgatg
      601 acctccccgc tctccgagat gttcgccggg gtcggggctg cggccgtcat ctactacggg
      661 ggccacagcg tggtgaatgg ccacagcacc gcgggcaatt tcttctcctt catcaccgca
      721 ctgttcatgc tctacgaacc cgtgaagcgg ctctcccgga tcaacaacgt cgtccagcag
      781 gggctcgccg ccggtgggcg cgtcttcgaa gtgatcgaca cgctgcccga ggtgcgggag
      841 gcggagggtg cggtcccgct cgccccgatc acgaaggaga tctccttcga tcgcgtcgat
      901 ttccagtacg ccccgggggg ggaaacggtc ctgaaggaga tcgacttccg cgtccccgcc
      961 gggacgatgg tcgccatcgt cggctccagc ggggcgggga agaccacgct ggtcgacctg
     1021 atcccgcggt tctacgaccc gcaggagggc gcgatccgga tcgacggggt cgacatccgc
     1081 ggcgtcacgc tcgcttccct tcgcgagcag atcgggatcg tcagccagca cacggtgctc
     1141 ttcaacgaca cggtccggaa caacatcgcc tacgggatgc ccgccgcccc gatggagaag
     1201 gtcgtcgagg cggctcgtcg cgccaacgcg cacctcttca tcgagcggat gcccgaagga
     1261 tacgcgacgg tcgtcgggga gcaggggctg cggttgtccg gcggcgagcg ccagcggctc
     1321 gcgatcgccc gggcgctgct gaaggacgca ccgctgctca tcctcgacga ggcgacctcg
     1381 gcgctcgaca ccgaatcgga gcacgtcgtg caggaggcgc tcgacaccct catgcgcggg
     1441 cggacgacct tcgtcatcgc gcaccggctc tccacggttc gcaacgcgga cgtgatcttc
     1501 gtggtcgagg acgggcgcat cgtcgagcgc gggcggcacg aagatcttct ctccgtggag
     1561 tcccgctacc ggtccttcta cc
//
LOCUS       DATGYW010000199         1595 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_123733, whole genome shotgun sequence.
ACCESSION   DATGYW010000199 DATGYW010000000
VERSION     DATGYW010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123733"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..943
                     /locus_tag="VK429_02720"
     CDS             <1..943
                     /locus_tag="VK429_02720"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011342355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HLN90755.1"
                     /translation="NGLLVGRMRIPLGVIAIIYESRPNVTADAAALCVKSGNAVILRG
                     GSEAIRSNVAIAGILREALAGAGLPEDAVSLVPRTDRAAIDALLTKEEYIDLVIPRGG
                     EGLIRSVAEKSRIPVIKHYKGVCHVYVDEGAEIPLAVRVCVNAKAQRPGVCNAMETLL
                     VHKGIASEFLPEAARALSAAGVAIRGCPETVRLVPAAVPALASDWGTEYLDLILAVRV
                     VPSIDAAMEHIRKHGSLHTEAIITRDHDRAMRFLREVDSSLVLVNASTRFNDGYQLGL
                     GAEIGISTTKIHAFGPMGLSELTTTKFVAFGDGQVRQ"
     gene            943..>1595
                     /gene="nadD"
                     /locus_tag="VK429_02725"
     CDS             943..>1595
                     /gene="nadD"
                     /locus_tag="VK429_02725"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: protein motif:HMM:NF000840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HLN90756.1"
                     /translation="MDGRRRRIALFGGTFDPFHNGHLRMAVEVMEGLPLTALFLVPSA
                     RPPHKPSRPMASAEDRLAMASAAVAGIDRISVLDLELRREGPSYSLLTVREVSEGNPG
                     ADLLFLIGADAFAEIATWHRYPELLAACDFLLLPRPGIAPEASFPPGIRIEPEGDRCY
                     NLPGCSYRLPGGRRLLCPVLPVLDISSRSIREKVWRGKSLRGLVPPEVERYITDHGL"
BASE COUNT          230 a          575 c          531 g          259 t
ORIGIN      
        1 gaacggcctt ctggtcggcc ggatgcggat ccccctcgga gtgatcgcga tcatctacga
       61 gtcgcgcccc aacgttaccg cggacgccgc ggcactgtgc gtcaagtccg ggaacgccgt
      121 gatcctgcgc ggggggtcgg aggcgatccg ctcgaacgtg gcgatcgccg ggatccttcg
      181 ggaagcgctc gccggggccg gactgcccga ggacgccgtt tccctcgtcc cgaggaccga
      241 ccgggccgcg atcgacgccc tcctcacgaa ggaggagtac atcgacctcg tcatcccgcg
      301 ggggggcgag gggctcatcc gcagcgttgc ggagaagtcc cgcatcccgg tgatcaagca
      361 ttacaagggt gtctgccacg tctacgtgga cgagggggcc gagatccccc tcgcggtgcg
      421 ggtctgcgtg aacgcgaagg cgcagcgccc cggcgtctgc aacgccatgg aaaccctcct
      481 cgtccacaag gggatcgcgt ccgagttcct ccccgaggcg gcgagggcgc tttccgccgc
      541 gggcgtcgcg atccgcggct gcccggaaac ggtgcgactc gtccccgccg ccgtccctgc
      601 cctcgcgtcg gactggggga cggaatacct cgacctcatc ctcgccgtgc gcgtggtccc
      661 gtcgatcgac gcggcgatgg agcacatccg gaagcacgga tcccttcata ccgaggcgat
      721 catcacccgc gaccacgacc gcgcgatgcg cttcctgcgc gaggtcgact cctcgctcgt
      781 gctggtgaac gcctcgaccc gcttcaacga cggctaccag ctcggactgg gagcggagat
      841 cggcatcagc acgacaaaga tccacgcctt cgggccgatg gggctgtccg agctcaccac
      901 gacgaaattc gtcgccttcg gcgacggcca ggtgcggcag tagtggacgg gcggcgtcgc
      961 cggatcgccc tcttcggcgg caccttcgac ccgttccaca acggccacct tcggatggcc
     1021 gtggaggtca tggaagggct cccgctgacc gccctcttcc tggtcccgtc ggcccgcccg
     1081 ccccacaagc cttcccggcc gatggcctcc gcggaggatc gcctcgcgat ggcgtcggcc
     1141 gccgtcgccg gcatcgaccg gatctcggtc ctggacctcg agcttcgccg cgaaggaccg
     1201 tcgtactccc tgctcacggt ccgggaagtc tcggaaggga acccgggagc cgacctcctg
     1261 ttcctgatcg gggccgacgc gttcgcggag atcgccacgt ggcaccggta ccccgagctc
     1321 ctcgcagcct gcgatttcct gctcctcccc aggccgggga tcgcgcccga ggcgtcgttt
     1381 ccccccggga tccgcattga accggagggg gaccgctgct ataatcttcc cgggtgttcc
     1441 taccgtctcc ccggcgggcg ccggctgctc tgcccggtgc ttccggtcct ggacatttcg
     1501 tcgcgttcca tccgggagaa ggtttggcgg gggaaatcgc tccgggggct ggtgccgccc
     1561 gaggtcgaga ggtacatcac ggaccacggc ctgta
//
LOCUS       DATGYW010000200         3491 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_393507, whole genome shotgun sequence.
ACCESSION   DATGYW010000200 DATGYW010000000
VERSION     DATGYW010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3491)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3491
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393507"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1606)
                     /locus_tag="VK429_02730"
     CDS             complement(<1..1606)
                     /locus_tag="VK429_02730"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HLN90757.1"
                     /translation="MTYGFHLHLHVNGKRGVDLLHDPHINKGTAFTEKERDALGLRGL
                     LPPRVSTLEQQVFRVLENIDRKPSDIEKFIYLVSLQDRQETLFYRVVMDNVEKMLPII
                     YTPTVGQGCMEFGHIFRRPRGLYLSFKNQGRFREILTNWPYHDVRIIVVTDGERILGL
                     GDLGANGMGIPVGKLSLYTACAGIHPTQCLPVMLDCGTNNKALLNDPLYIGTPSPRLR
                     GEAYDELVEEFFRAVKEIFPKACIQLEDFGNANAFRLLNKYKDHACMFDDDIQGTGAV
                     ALAGVCSALRLTGNRLTDQKFLFLGAGEAGIGIGELIVTALMAEGMPESEAKRRCWYV
                     DINGLIVKSRTDLASHHLPFAHDHAFIGDFGQAVEAIAPTAIIGVSGAPKMFSRPIIE
                     AMARMNRRPIIFALSNPTSKSECTAEEAYTWSEGRAIFASGSPFEPVTYKGKTFVPAQ
                     SNNSYIFPGVGLGVIISEAARVTEEMFFEAAKTLGGMVTEDEYAVGRIYPRLDRIREV
                     SVAIGVAVAEVAFRRGLTKLTRPDKPG"
     gene            1731..2282
                     /locus_tag="VK429_02735"
     CDS             1731..2282
                     /locus_tag="VK429_02735"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011464653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HLN90758.1"
                     /translation="MKQYRIAVVVGSLRKESFNRKLANAIAKLGPSDFSFQQVQIGDL
                     PLYNQDDDANPADSVKRLKREIADSQGLLFVTAEYNRSIPGVLKNAIDHASRPYGQSA
                     WAGKPAGVIGVSVGATGTSMAQQHLRNVLAYLDVPTLGQPEIFLQTKDGLFDESGAIG
                     PASKTFLQNWMDRYVPWVKKHAA"
     gene            2452..2889
                     /locus_tag="VK429_02740"
     CDS             2452..2889
                     /locus_tag="VK429_02740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011522724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HLN90759.1"
                     /translation="MDTSDNVTDLILRLTLAAVFFPHGAQKALGWFGGYGFTASLGFF
                     TGDMGIPTALAVLAIGAEFLGSLGLFVGLFARVAAFGIFCNMAVAVAMVHYKMGFFMN
                     WAGQMPAGNEGFEYHILALALAFAVMVRGAGPVSLDRVLSRKR"
     gene            2937..>3491
                     /locus_tag="VK429_02745"
     CDS             2937..>3491
                     /locus_tag="VK429_02745"
                     /inference="COORDINATES: protein motif:HMM:NF019378.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1614 domain-containing protein"
                     /protein_id="HLN90760.1"
                     /translation="MHYIPLAAPFFLALFLFYASVLVLIELRILRYTYETLGVDRRYI
                     FSLLLLSLLGSYINIPIVQLPPEQLVTPRIVDFFGMQYVIPAVAEHPGTIIAVNLGGA
                     VIPAILSIYLIVRNRLYLRSALAIGIVTVAVHLMAYPVQGVGIAEPMFIPPLVTAIVA
                     LAVSRDHAAPLAYIAGSMGTLIGAD"
BASE COUNT          623 a         1079 c         1055 g          734 t
ORIGIN      
        1 cccccggctt gtccggacgg gtcaatttcg tcaggccgcg ccggaaggcc acttccgcga
       61 cggcgacgcc gatcgcgacg gagacttccc ggatccggtc aagccggggg tagatccgac
      121 cgaccgcgta ttcatcctcc gtaaccatgc ccccaagcgt cttcgcggcc tcgaagaaca
      181 tctcctcggt gacgcgcgcg gcctcgctga tgattacgcc aagccccact ccggggaaga
      241 tgtacgagtt gttgctctgt gccgggacga aggtcttccc cttgtacgtt accggctcga
      301 acgggctgcc actcgcgaat atcgcgcgcc cctccgacca cgtatatgcc tcctcggccg
      361 tgcactccga tttcgaggtc ggattcgaga gggcgaagat gatcgggcgg cggttcatgc
      421 gcgccatcgc ctcgatgatc ggcctggaga acattttcgg cgcgccggaa acgccgatga
      481 tggccgtcgg cgcgatggct tcgacggcct gcccgaaatc gccgatgaac gcatggtcgt
      541 gcgcaaaagg cagatggtgg gaagcgaggt ccgtgcggct cttgacgatg agtccgttga
      601 tgtccacgta ccagcatctg cgtttcgctt cggattccgg catcccctcc gccatgagcg
      661 ccgtaacgat cagttcgccg atgccgatgc cggcctctcc cgcgccgagg aaaaggaatt
      721 tttggtcggt cagcctgttc cccgtgaggc gcagggcgga gcagaccccc gccagcgcga
      781 cggctccggt gccctggatg tcgtcgtcga acatgcaggc gtggtccttg tacttgttca
      841 ggaggcggaa tgcgttcgcg ttgccgaagt cctcgagctg gatgcaggcc ttcgggaaaa
      901 tctccttcac ggcacggaag aattcctcca cgagttcgtc gtacgcttcg ccccgcaggc
      961 gcggtgaagg agtgccgatg tagagcggat cgttcagaag cgccttgttg ttcgtgccgc
     1021 aatccagcat gacgggcagg cattgggtgg gatggatgcc cgcgcaggcg gtgtacaggg
     1081 aaagcttgcc tacgggaatc cccatcccgt tcgcgccgag gtcgcccagg ccgaggatcc
     1141 gctccccgtc cgttacgacg atgatgcgga catcgtggta cggccagttg gtcaggatct
     1201 cccggaagcg gccctgattc ttgaaggaaa ggtacagtcc tcgagggcgg cggaaaatat
     1261 gcccgaactc catgcaaccc tggcccaccg tcggggtgta gattatgggc aacattttct
     1321 cgacgttgtc catcaccacc cggtaaaaga gggtctcctg gcggtcctgg agcgatacca
     1381 ggtagatgaa cttctcgatg tcgctcggtt tccggtcgat gttttccaga acgcgaaaca
     1441 cctgctgctc cagcgtggac acgcgcggcg ggagcaaccc gcgcaggccc agggcgtcac
     1501 gctccttttc ggtgaaagcg gtgcccttgt tgatatgcgg gtcatgcaac aggtcgactc
     1561 cccgtttccc gttcacgtgc agatgcaggt ggaaaccgta cgtcatgaga ggcctcctcg
     1621 cagttcactc cgttacatcg ggttggttgc gcgggaatcg ccgttcgatc ggctccctat
     1681 ccgttatgat agactaaata tacatccatg gatcccggaa ggagagggtc atgaagcaat
     1741 atcgaattgc cgttgtcgtc ggcagtcttc gcaaagagtc cttcaaccgc aagcttgcca
     1801 atgccatcgc gaagctggga ccgtccgact tctcgttcca acaggtgcag atcggcgacc
     1861 tgccgctcta caaccaggat gacgacgcga atccggccga ctccgtcaag cggctgaagc
     1921 gcgaaatcgc cgattcccag ggcctcctgt tcgttaccgc cgaatacaac cgttcgatcc
     1981 ccggggtgct caagaacgcg atcgaccacg cctcgcgccc ttacggccag agcgcctggg
     2041 cgggcaagcc tgccggcgtg atcggggttt cggtcggcgc caccggcacg tccatggcgc
     2101 aacagcacct gcgcaatgtt ctggcgtacc tggacgttcc gacgcttggc caacccgaaa
     2161 ttttcctaca gacgaaggac gggctgtttg acgagtccgg cgccatcggg cctgccagca
     2221 aaacgttcct tcaaaactgg atggaccggt atgtcccctg ggtgaaaaag cacgctgcct
     2281 gacagccccg ggatcgttcc atcgatggcg ttttggatcg attctctccg aacctgaaat
     2341 ccgatcctcc gcatccgctc cctgtccggg tgaaaccaaa cctcccggat ttctctccaa
     2401 atacatgagg gattctcctg gagggtgaga gaacggatgt ggaaacggtt gttggacact
     2461 tccgataacg tgacggacct gatcttgcga ctgacactgg cggctgtctt ctttccccac
     2521 ggcgcgcaga aggcgctggg gtggttcggg gggtatgggt tcaccgcatc ccttggcttt
     2581 ttcaccgggg atatgggcat tccgacggcg ctcgcggtgc tggcgatcgg ggcggagttc
     2641 ctcggcagcc tgggactgtt cgtcggcctt ttcgcccgcg tggccgcctt cgggatcttc
     2701 tgcaacatgg ccgtggcggt ggcgatggtt cactacaaga tggggttttt catgaactgg
     2761 gcgggacaga tgcctgcggg aaacgagggg ttcgagtacc acatcctcgc gctggcgctg
     2821 gcgttcgccg tgatggtgcg cggggcaggc ccggtctccc tcgaccgcgt cctgtccagg
     2881 aagcgctgaa tcccccggcg ccgcatttca tcggtcggga ctaaggaaac gaacggatgc
     2941 attatattcc actcgccgcc ccgttctttt tggcgctttt tcttttctac gcttccgttc
     3001 ttgttctgat cgagcttcga atcctccgat acacttacga aacgctgggg gtcgaccgcc
     3061 gatatatctt ttccctgctg ctgttgtccc tgctgggaag ctatatcaat attcccatcg
     3121 tccaactgcc gccagagcag ctggttacgc cccggatcgt ggactttttc ggaatgcaat
     3181 atgtgatacc ggcagtggcc gagcatccgg ggacgatcat cgccgtaaac cttggcggcg
     3241 cggtgatccc cgcgattctt tccatctacc tcatcgtgag gaataggctc tatctccgaa
     3301 gcgccctggc gatcggaatc gttacggtcg cggtccacct catggcgtat cccgtccagg
     3361 gggtcgggat cgcggaaccg atgttcatcc cccctctcgt cacggcgatc gtcgccctcg
     3421 ccgtttcccg ggatcacgcc gcaccgctgg catacatcgc cggcagcatg gggaccttga
     3481 tcggggccga c
//
LOCUS       DATGYW010000201         3164 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_286596, whole genome shotgun sequence.
ACCESSION   DATGYW010000201 DATGYW010000000
VERSION     DATGYW010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286596"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..531)
                     /locus_tag="VK429_02750"
     CDS             complement(<1..531)
                     /locus_tag="VK429_02750"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007222520.1"
                     /note="Catalyzes the reversible oxidation of malate to
                     oxaloacetate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HLN90761.1"
                     /translation="MSRKKITVIGAGNVGATTAQRLAERDFCDVVLVDIVEGMPQGKA
                     LDLMQSGPIYGYDSKVTGTSGYEDTAGSDIVVITSGLARKPGMSRDDLLKVNAGIVKD
                     VTLKAIARSPQALIIVVSNPLDAMTYVAYKHSKLPANKVVGMAGILDSARFRAFIAME
                     LGVSVRDVTAFVLGGHG"
     gene            complement(673..1740)
                     /locus_tag="VK429_02755"
     CDS             complement(673..1740)
                     /locus_tag="VK429_02755"
                     /inference="COORDINATES: protein motif:HMM:NF024891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransacetylase family protein"
                     /protein_id="HLN90762.1"
                     /translation="MKLYIASTSEYAGKTLLALALGTIWKEGGVRVGYVKPLGKIPVV
                     REGRLVDGDAMFLADALALDVPPDAVCPVVITQDLVMAAWRGEELRLRGRISAAVRDA
                     EARSEVLLVGGTANLRDGIFLGISPLEFIANYDCRVVLLDRFEGEKSMDQVLSAVDSL
                     GPRFLGVVFNRVQPAQEIFVRETVIPYFGKRGVRVLGVLPSDPVLGSVSVRSLADSLS
                     ASVVFGGEDGGKAMIERFCVGAMDVEHALRVFRGIPRKAVVTGGHRTDIQLAALETDT
                     VCLVLTGGVAPNELILARAREKGVALLTVAEDTMATVDRFESLLGRLRIREPEKARRG
                     VELVRAAVDTAGLLSLCRLSP"
     gene            complement(1737..>3164)
                     /locus_tag="VK429_02760"
     CDS             complement(1737..>3164)
                     /locus_tag="VK429_02760"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HLN90763.1"
                     /translation="NVTPRKPVIIVKAGATAAGARAASSHTGSLAGSDRAYAAAFRQG
                     GVLRAGTVEDLFDLALGFAMQPLPAGDRLLILTNAGGPGILAADTAERLGIPLAGVSA
                     SLRERILPALPPTASLGNPVDIIGDARADRYRNVLAALRDEPSVDAVLVLLTPQAMTE
                     PEETARATVSSFAGSGKTVFASFLGEATVASSRRILSDGGVPNYPVPERAVRTLSAML
                     RYSRIHAAEAPEKEEAPSIRPETAERLVSDALSAGRRALGEEESRGILEAYGFAFPRH
                     AFAGTSDAAVAAYREMGCASVAMKIVSPQVLHKTDVGGVRLDLRGEEAVARAFMEITS
                     SVRRLAPSAWIAGVSVQEMVTGGRELIVGMSRDPQFGPLLMFGLGGIYVEVLKDVSFR
                     VAPLSRRDAEEMVREIRAWPLLAAYRGSEPADEGAIVEALLRVSRLSCDFPELQELDI
                     NPLLVLPKGKGIRAIDCRMTIAEAP"
BASE COUNT          511 a         1153 c         1028 g          472 t
ORIGIN      
        1 gccgtgaccg cccaggacga aggccgtcac gtcgcgcacg gagacgccca gctccatggc
       61 gatgaaggcc cggaaacggg cggagtcgag gatcccggcc atgcccacca ccttgttggc
      121 gggaagcttg ctgtgcttgt acgccacgta ggtcatggcg tcgaggggat tcgacacgac
      181 gatgatcagc gcctgggggg acctggcgat cgccttgagg gtcacatcct tcacgatccc
      241 cgcgttgacc ttgaggaggt cgtcgcggct catccccggc ttgcgcgcca gccccgacgt
      301 gatgacgacg atgtcggacc ctgctgtatc ctcgtacccg ctggtcccgg tgaccttgct
      361 gtcgtacccg tagatcgggc cggactgcat caggtcgagc gcttttccct gcggcatccc
      421 ctcgacgatg tcgacgagca cgacgtcgca gaagtccctc tcggccagcc gctgcgcggt
      481 cgtcgccccg acgtttcccg ctccgatgac cgtaatcttt ttccggctca tcgcgcactg
      541 tccccagacg gaatcaaact cttgaagagg gccatctctt tctccatcct cgggataata
      601 tgggattttc cggcaagaat ggggatcggt ccccccaaac ctcgcatacc gtatacaaag
      661 accggcggga tgtcaagggg agagccgaca cagcgacagc agcccggcgg tgtccacggc
      721 cgcgcgcacc agctcaacgc cccggcgggc cttttccggc tcccggatcc gcaggcggcc
      781 gagaagactc tcgaaccggt ccaccgtcgc catcgtgtcc tcggccacgg tcaggagggc
      841 cacccccttc tcgcgagccc gggccaggat gagttcgttc ggcgcgacgc caccggtcaa
      901 taccaggcag accgtgtcgg tctcgagcgc cgccagctgg atatccgtgc ggtgtcctcc
      961 ggtgacgacc gccttccgcg ggatcccccg gaagacccga agggcgtgct ccacgtccat
     1021 cgcgccgacg cagaaccgct cgatcatcgc cttcccgccg tcttccccgc cgaagacgac
     1081 cgacgcggag agggagtccg cgagggatcg gacgctcacg ctcccgagca cggggtccga
     1141 ggggaggaca cccaggacac gcactccccg cttcccgaag taggggatca ccgtttcccg
     1201 cacgaatatc tcctgcgccg gctggacgcg gttgaagacc acgccgagga accgcggccc
     1261 cagggagtcg accgccgaca ggacctggtc catcgatttc tccccctcga agcggtcgag
     1321 gagcacgacg cggcagtcgt agttcgcgat gaactccagc ggggagatcc cgaggaagat
     1381 gccgtcccgg aggttcgcgg tccccccgac gaggagcacc tcggagcgcg cctcggcgtc
     1441 gcgcacggcg gccgagatcc tcccccgcag gcgcagctcc tccccgcgcc aggcggccat
     1501 caccagatcc tgggtgatca cgaccgggca gactgcgtcg ggcggcacgt ccagggccag
     1561 cgcgtccgcc aggaacatcg cgtccccgtc caccagccgc ccctcccgca ccaccgggat
     1621 cttcccgagg ggcttgacgt accctacccg caccccccct tccttccaga tcgttcccag
     1681 ggcgagggcc agaagggtct tccccgcgta ttccgacgtc gacgcgatgt acagcttcat
     1741 ggggcctccg cgatggtcat ccggcaatcg atcgcgcgga tgcctttccc tttcggaagt
     1801 accagcaacg ggttgatgtc gagttcctga agctccggga agtcgcacga caggcgcgat
     1861 acccgtagca acgcctccac gatcgcaccc tcgtccgcag gctcgcttcc ccgatacgcg
     1921 gcgagcagcg gccaggcgcg gatctcccgg accatctctt cggcgtcgcg ccgcgacaac
     1981 ggggccaccc ggaaggagac gtccttcagc acctccacgt agatcccccc gaggccgaac
     2041 atcaggagcg ggccgaactg ggggtcgcgg ctcatcccca cgatcagctc cctgccgccc
     2101 gtgaccatct cctggaccga cacgccggcg atccaggccg acggggccag ccgtcggacg
     2161 gaggaggtga tctccatgaa agcccgggcc acggcttcct cgccgcgaag gtcgagtcgc
     2221 acgccgccca catccgtctt gtgcaggacc tgcggggaga cgatcttcat cgccacggac
     2281 gcgcacccca tctcccggta cgcggcgacg gcggcgtcgc tcgtcccggc gaaggcgtgg
     2341 cgcgggaacg cgaacccgta ggcctcgagg attccccggg actcctcctc cccgagcgct
     2401 ctccgtcccg cggaaagggc gtcgctcacg aggcgctccg cggtttccgg gcggatcgac
     2461 ggggcctcct ccttctccgg tgcttccgcc gcgtggatgc gggaatatcg aagcatcgcg
     2521 gaaagtgtcc gcacggcccg ttcggggaca ggatagttgg ggacgccccc gtcgctgagg
     2581 atccggcgcg acgatgccac cgtggcctcc ccgaggaagg atgcgaacac ggtcttgccg
     2641 gagccggcga aggaggaaac ggtcgctctc gcggtctcct ccggctccgt catcgcctgg
     2701 ggcgtcagca ggacgaggac ggcgtcgacc gacggctcgt cccggagcgc cgcgaggacg
     2761 ttcctgtacc ggtccgcgcg ggcgtccccg atgatgtcca cagggttccc caggctcgcc
     2821 gtgggcggca gcgcgggaag aatccgctcc cgaagggagg cggagacccc ggcgagaggg
     2881 atgccgaggc gctccgccgt atccgccgcg aggatcccgg gcccccccgc gttcgtcagg
     2941 atcaggagcc gatcccccgc ggggagcggc tgcatcgcga atccgagggc caggtcgaag
     3001 agatcctcca ccgtccccgc ccggagcacc ccgccctgcc ggaacgccgc cgcgtaggcg
     3061 cggtcggatc cggcgaggct gccggtgtgg gaggaggcgg cgcgcgcccc cgcggcggtg
     3121 gctcccgcct tcacgatgat gaccggtttc cggggcgtca cgtt
//
LOCUS       DATGYW010000202         2170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_337088, whole genome shotgun sequence.
ACCESSION   DATGYW010000202 DATGYW010000000
VERSION     DATGYW010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337088"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1203)
                     /gene="trpD"
                     /locus_tag="VK429_02765"
     CDS             complement(<1..1203)
                     /gene="trpD"
                     /locus_tag="VK429_02765"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR01245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HLN90764.1"
                     /translation="MIAVIDNYDSFTWNLVQYISELGAEVEVFRNDAITVEELALRKP
                     AGLVISPGPGGPDEAGISLDAIRAFEDRIPILGVCLGHQCIGQAFGGRIVHAQALMHG
                     KTSRVRHNGKGIFSMVENPMTATRYHSLAVERGTLPPELEVCAEAEDGEVMGVRHLEK
                     PVFGVQFHPESILTQSGMRLLENFLSLIDPSQPVLREFGNIREAIAAVSGRKNLSADG
                     MRDAMRMIMGGEASPAQISSFLSCLSMKGETITEIAAAAEVMRQKAIRVVPPAGKEVL
                     DTCGTGGDRAGTFNISTTVAFVAAGSGIAVAKHGNRSVTSRSGSADVLEALGMDLNSD
                     PAHVQRALDEAGITFMFAPRFHSAMKYAIGPRREIAIRTIFNILGPISNPAGVRRQVV
                     GVFSEELGD"
     gene            complement(1200..>2170)
                     /locus_tag="VK429_02770"
     CDS             complement(1200..>2170)
                     /locus_tag="VK429_02770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018077977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HLN90765.1"
                     /translation="SVHAGEDPGAVYERALDAIEEVRGILRVPLEGSEVPDGDDGGEK
                     PAFEMPRGEFLDAVGKAKEHIRNGDIIQAVLSNRATVRTRRTPAEVYRVLRAINPSPY
                     MYLLRMGDLSIVGSSPEILVRLEGDEIQLRPIAGTRPRGDTPQEDRRMETELLSDPKE
                     LAEHVMLVDLGRNDVGRVAVWGSVKADELMGIERYSHVMHIVSNVVGKLREGLTAFDV
                     LRAAFPAGTVSGAPKVRAMQIISELEPFRRGIYAGAVGYFDLQGSMDFCIAIRTIVMS
                     GGEAMIQAGAGIVADSDPAREWDEILSKAKILFRAVGVSPETLGAP"
BASE COUNT          357 a          763 c          672 g          378 t
ORIGIN      
        1 atccccgagc tcctcgctga acaccccgac gacctgtcgc cgaacaccgg cgggattgct
       61 gatagggccg aggatattga agatcgtccg gatggcgatc tcccgtcgcg ggccgatggc
      121 gtatttcatc gcggagtgaa accttggagc gaacatgaag gtgatccctg cctcatcgag
      181 tgcgcgctgc acatgcgccg gatccgagtt cagatccata ccgagggctt ccagcacgtc
      241 cgcgcttccg gatcggctgg tcacggagcg gtttccatgc ttggccacgg cgatgccgct
      301 tcccgcggcg acgaacgcca cggtagtgga tatgttgaac gttccggcgc gatcccctcc
      361 cgttccgcac gtgtcgagga cctctttccc cgccggaggg acgacgcgga tcgccttctg
      421 ccgcatcact tcggcggccg cggcgatctc cgtgatcgtc tcccccttca tggagagaca
      481 ggacaggaac gaggagatct gggcggggga agcctccccc cccatgatca tccgcatcgc
      541 gtcccgcatc ccgtcggccg acaggttctt gcgccccgac acggcggcga tcgcctcccg
      601 gatgttcccg aactcgcgca ggaccggctg ggacgggtcg atcagggaaa ggaaattttc
      661 gagaagccgc attcccgact gggtcaggat cgattcgggg tggaactgca cgccgaacac
      721 cggtttttcg aggtggcgga cccccatcac ctccccgtcc tcggcctcgg cgcacacctc
      781 cagttccggg ggaagggtcc cgcgctccac ggcgagggaa tggtaccgcg tggcggtcat
      841 cgggttctcg accatcgaga agatcccctt gccgttgtgc cggacgcggg aggtcttccc
      901 gtgcatgagc gcctgggcgt ggacgatccg tcccccgaac gcctgcccga tgcactggtg
      961 ccccaggcag acgccgagaa tggggatccg gtcctcgaac gcccggatcg cgtcgagaga
     1021 gatcccggcc tcgtccggcc ctcccggccc cggcgagatc acaaggccgg ccggtttccg
     1081 cagcgcaagc tcctccaccg tgatcgcgtc gttgcggaac acctccactt cagcgccgag
     1141 ttcgctgata tattgcacga ggttccaggt gaacgaatcg taattgtcga tgacggcgat
     1201 catggcgccc ccagcgtttc cggcgaaacg ccgacggcgc ggaagaggat cttcgccttg
     1261 ctcagaatct cgtcccactc ccgcgccggg tccgaatccg ctacgatccc cgccccggcc
     1321 tggatcatcg cctccccccc cgacatcacg atggtccgga tggcgatgca gaagtccatg
     1381 cttccctgca ggtcgaaata ccccaccgcc cccgcgtaga tcccccggcg gaacggttcg
     1441 agttcggaga tgatctgcat cgcccggacc ttcggtgcgc ccgagaccgt ccccgcggga
     1501 aacgccgcgc ggagcacgtc gaacgccgtg agaccctcgc gcagcttccc gaccacgttc
     1561 gacacgatgt gcatgacgtg cgagtaccgc tcgatcccca tcagttcgtc ggccttcacg
     1621 gatccccaca cggcgacccg gcccacgtcg ttgcggccaa ggtccacgag catcacgtgc
     1681 tccgcgagct ccttcggatc cgacagcagc tccgtctcca tccggcggtc ctcctggggg
     1741 gtgtcgcccc gggggcgcgt cccggcgatc ggccggagct ggatctcgtc cccctcgagc
     1801 cgaacgagga tctcgggcga ggaaccgacg atcgacagat cgcccattct cagcaggtac
     1861 atgtaggggg agggattgat ggcgcgaagg acgcggtaca cctcggcggg agtccggcgt
     1921 gtgcggacgg tcgcccgatt ggagagaacc gcctggatga tgtcgccgtt ccgtatgtgc
     1981 tccttggcct tccccaccgc gtcgaggaac tcccctcggg gcatttcgaa cgcgggtttc
     2041 tcccctccat cgtcgccgtc cgggacttcg gatccttcca gcggcacgcg aaggattccg
     2101 cgaacttcct cgatggcatc gagcgcccgc tcgtagacgg cgcctggatc ctcccctgcg
     2161 tggaccgaac
//
LOCUS       DATGYW010000203         2771 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_393885, whole genome shotgun sequence.
ACCESSION   DATGYW010000203 DATGYW010000000
VERSION     DATGYW010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2771
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393885"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..390)
                     /locus_tag="VK429_02775"
     CDS             complement(<1..390)
                     /locus_tag="VK429_02775"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLN90766.1"
                     /translation="MAKIPESYLPPAELRPKRIYSLDEFKNIPQKFNSTEVLLDQTAA
                     KYGDKAAIYFEDKSLTYKQLQASVNRVANGLKKLGVEEGDRVLMRMPNIVPIIVSNFA
                     IIKIGAVSLPTSVLFARTEIAHVANLAE"
     gene            complement(461..835)
                     /locus_tag="VK429_02780"
     CDS             complement(461..835)
                     /locus_tag="VK429_02780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90767.1"
                     /translation="MKVEFYYDSTVAPGSAFPCDNAKAVALVEQLAAKGVNAKATDLK
                     GQQVAFMTYNSALTGPKAQVRAVFGAKGALQEDFGKNVPALLVFEKDADRYPTEAYPR
                     SDKELQRLLGCEEALQNLLAKS"
     gene            complement(984..1175)
                     /locus_tag="VK429_02785"
     CDS             complement(984..1175)
                     /locus_tag="VK429_02785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90768.1"
                     /translation="MAKIVPNCQACNNFMASKDPEISKAYMGQCLKLEWPYNINIPLE
                     DGIEGECGFYEGAGPAVKK"
     gene            complement(1228..1620)
                     /locus_tag="VK429_02790"
     CDS             complement(1228..1620)
                     /locus_tag="VK429_02790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90769.1"
                     /translation="MPFKDASLILQCPKCDVINYLDPFTFWNFKGKIKCAGCDVVYEY
                     ALKNGHRQGPPKETKGPHDKLPGFAQTKDWKPITTPGKVAAAPQAREDFQGKPIPITK
                     SIRGKAVSGKPLSAAELVGSVPKMFSNS"
     gene            complement(1640..>2771)
                     /locus_tag="VK429_02795"
     CDS             complement(1640..>2771)
                     /locus_tag="VK429_02795"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLN90770.1"
                     /translation="FNEPFLYPLSRWMPDKGTGLGFFGANPNELFLSLDFHKPEAIEI
                     MKRLAAKTDVFAENYRAGTFDRWGIGYRQHAQVNPRVIYQWMGGFGGWGPGRNRASYD
                     ILGQAQGGCFSITGWHKEYGGMPSKQTIWIMDYWGGAISAFNILACLYWRDNVSGKGN
                     FLEYSQVHGAQRHLTDFISIYGKTGIVPQRFGNFEPLLCVHGILKCGKSSYPNSKNPQ
                     EMEVGFCLVSAYKDDDFQKLCKMINRPDLAKKYPTHADRVGADAQTAIYPELEKFAAD
                     KTKEEVDKACKANGILSQPVWNSKEVATNEHWHMRGTLQWLDDPTFGDVLTQGPAYQL
                     SDTPARVRWAFKPVGADNEYILSKLCGYSGSKIADLEQKEII"
BASE COUNT          433 a          881 c          867 g          590 t
ORIGIN      
        1 ctcggccagg ttcgccacgt gggcgatctc ggtgcgggcg aacaggaccg aggtcggcag
       61 ggagacggcc ccgatcttga tgatggcgaa gttggacacg atgatcggga cgatgttggg
      121 catccgcatc aggacgcggt ccccctcttc caccccgagc ttcttcaggc cgttggcgac
      181 acggttcacg ctcgcctgga gctgtttgta ggtgaggctc ttgtcttcga aatagatcgc
      241 cgccttgtcg ccatacttgg cggccgtctg gtcgaggagg acctcggtgg agttgaactt
      301 ctgcgggatg ttcttgaact cgtcgagact gtagatccgc ttgggccgca gttccgccgg
      361 cggcaggtag ctctcgggta tcttcgccat cactcctcct ttcgtgaacg ggggcgcagg
      421 gccgttcccg gccccgcgcc cgtcggtttg ggatgcggga tcaggacttc gcgaggagat
      481 tctgcaacgc ctcctcgcag ccgaggagcc gctggagctc cttgtcggac cgcgggtacg
      541 cctccgtcgg gtaccggtcg gcgtccttct cgaagacgag gagggccggc acgttcttcc
      601 cgaaatcctc ctgcagggcc cccttcgcgc cgaagaccgc gcggacctgg gccttgggac
      661 ccgtcagtgc cgagttgtac gtcatgaagg cgacctgctg ccccttcagg tcggttgcct
      721 tggcattcac gcccttggcc gcaagctgct cgacgagggc gaccgccttc gcgttgtcgc
      781 aggggaatgc ggacccggga gccaccgtgc tgtcgtaata gaactccacc ttcatcgtcg
      841 tacccctcct ttgttatggt gtctggatgt acccgccgtg aaaaagacaa aatccacggc
      901 cgcacccgat ttcccccgag gcggccgtgg atttgccgcg tcgctaatct atcagaccgg
      961 cgacggtcgg ttcaagaacc tttttacttc ttcacggccg ggccggcccc ctcgtaaaaa
     1021 ccgcactccc cctcgatgcc gtcctcgagg gggatgttga tattgtacgg ccactcgagc
     1081 ttcaggcact gccccatgta ggccttgctg atctcggggt ccttcgaggc catgaagttg
     1141 ttgcacgcct ggcaattcgg tacgattttc gccacggtat ctcctcctgt ctgtttctga
     1201 cggaccggaa ccctcgcggg cggcccctta tgagtttgag aacatcttcg ggacgctccc
     1261 gaccagctcg gcggccgaca gcggcttgcc ggaaacggcc ttcccccgga tgctcttcgt
     1321 gatcgggatc ggcttcccct ggaagtcttc ccgggcctgg ggcgccgccg ccaccttgcc
     1381 gggcgtggtg atcggcttcc agtccttggt ctgggcgaaa ccgggcagct tgtcgtgcgg
     1441 ccccttcgtc tccttcggcg ggccctgccg gtggccgttt ttcagcgcgt attcgtagac
     1501 cacgtcgcac ccggcgcact tgatcttccc cttgaagttc cagaatgtga acggatcgag
     1561 gtagttgatc acgtcacact ttgggcactg aagaatcaac gaagcgtctt tgaaaggcat
     1621 cgtatccccc cttttctctt tagatgatct ctttctgctc caggtcggcg atcttggaac
     1681 cgctgtagcc gcacagcttg gacaggatgt actcgttgtc ggcgccgacc ggcttgaacg
     1741 cccagcggac gcgggccggg gtgtcggaca gctggtacgc cggaccctgg gtcaggacgt
     1801 ccccgaaggt cgggtcgtcg agccactgga gcgtgccgcg catatgccag tgctcgttcg
     1861 tcgcgacttc cttggagttc cacaccggct gggagaggat cccgttcgcc ttgcaggcct
     1921 tgtcgacttc ttccttcgtc ttgtcggccg cgaacttctc gagctcgggg tagatggccg
     1981 tctgcgcatc ggcgccgacg cggtccgcgt gagtcgggta cttcttggcc aggtcgggac
     2041 ggttgatcat cttgcacagc ttctggaaat cgtcgtcctt gtaggcggag acgaggcaga
     2101 agccgacttc catttcctgc gggttcttcg agttcgggta cgacgacttc ccgcacttga
     2161 ggatcccgtg aacgcacagc agcggctcga agtttccgaa gcgctggggg acgatgccgg
     2221 tcttcccgta gatggagatg aagtcggtca ggtggcgctg ggcgccgtgg acctgcgaat
     2281 attcgaggaa gttccccttc cccgacacgt tgtcccgcca gtagaggcag gcgaggatgt
     2341 tgaacgcgga gatggcgccg ccccagtagt ccatgatcca gatcgtctgc ttggagggca
     2401 tcccgccgta ctccttgtgc cagccggtga tcgagaagca gccgccctgc gcctggccaa
     2461 ggatgtcgta cgaagcccgg ttacgtcccg gaccccagcc gccgaacccg cccatccact
     2521 ggtagatgac gcgcgggttg acctgggcgt gctgccggta cccgatcccc caccggtcga
     2581 acgtccccgc gcggtagttc tcggcaaaga cgtccgtctt tgccgccagc cgcttcatga
     2641 tctcgatcgc ctccggcttg tggaagtcca gcgacaggaa gagctcgttc gggttcgcgc
     2701 cgaagaagcc cagccccgtc cccttatccg gcatccaccg ggagaggggg tagaggaacg
     2761 gctcgttgaa c
//
LOCUS       DATGYW010000204         2386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_447612, whole genome shotgun sequence.
ACCESSION   DATGYW010000204 DATGYW010000000
VERSION     DATGYW010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2386
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447612"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..552
                     /locus_tag="VK429_02800"
     CDS             <1..552
                     /locus_tag="VK429_02800"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLN90771.1"
                     /translation="ILLVADEIQTGMGRTGAFLASDRFDIAPDVVTLAKGIANGLPLG
                     AVVARDEVAAVLVPGTHGSTFGGNPVCCAAALAVMDVLESPGFYDAVVRKGERLLGGL
                     SGIAARRTDLRNVRGVGLMVGAEMACETKPIAAKCLDAGLVVNAAAGNILRFLPPLTV
                     TEGEIDRALEILSAVLPVEGWKA"
     gene            549..1463
                     /gene="argF"
                     /locus_tag="VK429_02805"
     CDS             549..1463
                     /gene="argF"
                     /locus_tag="VK429_02805"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011843843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HLN90772.1"
                     /translation="MKRDLLRILDLSDKEILSLIRSGMTWKRRGGSPRAPRPLAGKSL
                     AMIFQKASTRTRVSFEVAMTRLGGHALFLSHQDTQIGRGEPIRDTARVLSRYADAVMI
                     RTFGHETAVGFAAAATVPVINGLTDGHHPCQILADLMTAEERGKDLRRMRVAFIGDGN
                     NVANSWVEAAHVLGFDLRIACPEGYEPDPAVRKDAGRTGRGEVRIVRDPAEAARGADV
                     LYTDVWTSMGQEAEARKRLAAFKGYCVDAAMLRLARSGAIVMHCLPAHRGEEITEEVF
                     EGPNSAVFDEAENRLHVQMAVLEKFIKH"
     gene            1484..>2386
                     /locus_tag="VK429_02810"
     CDS             1484..>2386
                     /locus_tag="VK429_02810"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012814338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HLN90773.1"
                     /translation="MKKVKKVVLAYSGGLDTSVILAWLVENYGCEVIAFVADLGQGEE
                     LGPVRAKAMKTGASKVYVENVQDEFVRDFVFPALMANAVYEGQYLLGTSIARPLIAKK
                     QIEVARRENADAVSHGATGKGNDQVRFELTYYALMPGIHVIAPWREWDLTSRTDLVNY
                     AKKRGIPTPVTAAKPYSSDRNLLHISFEGGILEDPWMEPPESMFVLTRSPEKAPNRPE
                     YVEVDFTGGIPVAVNGKKMGPAKLLAHLNALGGKHGIGRVDLVENRFVGMKSRGVYET
                     PGGTILLTAHRAIESITLDREVAHL"
BASE COUNT          423 a          770 c          819 g          374 t
ORIGIN      
        1 atcctcctcg tcgccgacga gatccagacc gggatgggac ggaccggcgc gttcctcgcg
       61 tccgaccggt tcgacatcgc acccgacgtc gttacactgg cgaaggggat cgcgaacggc
      121 ctgcccctgg gcgccgtcgt cgcgcgcgac gaggtggccg ccgttctcgt cccggggacg
      181 cacggcagca ccttcggcgg gaacccggtc tgctgcgccg ccgccctcgc ggtgatggac
      241 gtcctggaat cccccggctt ctacgacgcc gtggtccgca aaggggagcg gctcctgggg
      301 gggctctcgg ggatcgccgc ccggcggacc gacctccgga acgttcgggg cgtcggcctc
      361 atggtgggcg cggagatggc gtgcgagacg aaaccgatcg ccgcgaagtg cctcgacgcg
      421 ggcctcgtcg tgaacgcggc ggcgggaaac atcctgaggt tcctcccccc cctcaccgtc
      481 acggaggggg agatcgaccg ggcgctcgag atcctttcgg cggtccttcc ggtggagggg
      541 tggaaggcgt gaagagggac ctgctccgga tcctggacct ttcagacaag gagatcctct
      601 ccctgatccg gtccgggatg acgtggaagc gccgcggagg atctccgagg gcgccccgcc
      661 cgctcgcggg gaagtcgctg gcgatgatct tccagaaggc gtcgacccgg acccgcgttt
      721 cgttcgaggt cgcgatgacc cgtctgggag gccacgcgct cttcctgtcc caccaggaca
      781 cgcagatcgg gcggggggag ccgatccgtg acacggcgcg cgtcctttcc cggtacgccg
      841 acgccgtgat gatccgcacg ttcgggcacg aaacggcggt cgggttcgcg gcggccgcga
      901 ccgtccccgt gatcaacgga ctgacggatg gccatcaccc gtgccagatc ctcgccgacc
      961 tgatgaccgc ggaggagcgg gggaaagacc ttcggaggat gcgggtggcg ttcatcggcg
     1021 acggcaacaa cgtggccaat tcctgggtcg aggcggccca cgtcctcggg ttcgaccttc
     1081 ggatcgcgtg cccggaggga tacgaaccgg atcccgcggt tcgaaaggat gcggggagaa
     1141 ccggccgcgg agaggtccgg attgtccgcg accccgcgga agcggcgcgg ggagccgatg
     1201 ttctttacac ggacgtctgg accagcatgg gccaggaagc cgaggcccgg aagcggctcg
     1261 ccgccttcaa ggggtattgc gtcgacgcgg cgatgcttcg tctggcgcgt tccggagcga
     1321 tcgtgatgca ctgcctcccc gcccatcgtg gcgaggagat caccgaggag gttttcgagg
     1381 ggccgaattc cgccgtcttc gacgaggcgg agaaccgcct gcacgttcag atggccgttc
     1441 tcgaaaaatt catcaaacac tgaagattca agggggtaac aaattgaaaa aagtcaagaa
     1501 agttgttctg gcgtattcgg gaggactgga cacctcggtc atcctcgcgt ggctcgtcga
     1561 gaattacggt tgcgaagtga tcgccttcgt cgccgacctt ggacagggag aggaactggg
     1621 ccccgtgcgc gccaaggcga tgaagaccgg cgcgtcgaag gtctacgtgg agaacgtgca
     1681 ggacgagttc gtccgcgact tcgttttccc cgcgctcatg gcgaacgcgg tctacgaggg
     1741 ccagtatctc ctcggcacct ccatcgcccg accgctgatc gccaagaagc agatcgaggt
     1801 ggccagaagg gagaatgccg acgcggtctc ccacggggct accggaaagg ggaacgacca
     1861 ggtacgtttc gaactcacct attacgccct gatgcccggg atccacgtca tcgccccatg
     1921 gcgcgaatgg gacctcacct cgcggaccga cctggtgaac tacgcgaaga agcgcggcat
     1981 cccgacgccg gtcaccgcgg caaagccgta ctccagcgac cggaacctgc tccatatcag
     2041 cttcgagggg gggatcctcg aggatccgtg gatggaaccg cccgagagca tgttcgtcct
     2101 cacccggtct ccagagaagg cgccgaaccg tcccgagtac gtcgaggtcg acttcacggg
     2161 agggatcccc gttgcggtca acgggaagaa gatggggccg gcgaagctgc tcgcccacct
     2221 gaacgccctc ggggggaagc acggcatcgg ccgcgtcgac ctcgtcgaga accgcttcgt
     2281 cggcatgaag tcgcgcggcg tctacgaaac ccccggcggc acgatcctgc tcaccgccca
     2341 tcgcgcgatc gagtcgatca cgctcgaccg cgaagtggcg cacctg
//
LOCUS       DATGYW010000205         2090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_447752, whole genome shotgun sequence.
ACCESSION   DATGYW010000205 DATGYW010000000
VERSION     DATGYW010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447752"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..325)
                     /locus_tag="VK429_02815"
     CDS             complement(<1..325)
                     /locus_tag="VK429_02815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013194225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HLN90774.1"
                     /translation="MNKLHFASQAFPDNGMIPPEYTCDGANGNPPLTIRNVPAKTRSL
                     ALIVDDPDAPRGNWVHWVVWNIGPETTEIPANSVPRGALQGTNDFGKQSYGGPCPPSG
                     THRYFF"
     gene            complement(416..991)
                     /locus_tag="VK429_02820"
     CDS             complement(416..991)
                     /locus_tag="VK429_02820"
                     /EC_number="1.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012465610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016646 - oxidoreductase activity, acting
                     on the CH-NH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HLN90775.1"
                     /translation="MKKSFGAKTLVFPTPAWVVGTYDREGKPNVMSAAWGGVCCSSPP
                     CLAVSLRKATYTYGNIVERKAFTVNVPSEGYAREVDYIGMVSGRNVDKFVTSGLTPVR
                     SSLVDAPYIGEFPLVIECRLLHTIAIGLHTQFVGEILDVKAEESVCDAKGDVDIEKVK
                     PMLFDPEINTYHGVGRLLGRAFSIGKDIRGR"
     gene            1156..1971
                     /locus_tag="VK429_02825"
     CDS             1156..1971
                     /locus_tag="VK429_02825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018286297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HLN90776.1"
                     /translation="MGILQGRKGLILGVANEKSIAWGVARACHREGAELGFNYLGDAL
                     KKRVHPLAESIQSRFVEPLDVGDDAQIDDFFAKAEARWKRLDFIVHSIAFANRESLNG
                     NFRDTSRADFHLALDISAYSFIACARRAARLMGPGGAMVTMSFLGSVRAVPNYNVMGV
                     AKAALEAATRYLAHDLGPDGIRVNAVSAGPIRTLAASGVGDFRKLMEKSARGAMLRRN
                     VTQDEVGNATVYLLSDWASGVTGEVHYVDAGFNIGGGDPGVEPAASGSASPSS"
BASE COUNT          405 a          611 c          646 g          428 t
ORIGIN      
        1 tgaagaaata ccggtgcgtt ccggaaggcg ggcaggggcc gccgtagctc tgcttcccga
       61 aatcgttcgt cccctggagc gcacccctcg ggacggagtt cgccgggatt tccgttgttt
      121 caggccctat attccagacg acccaatgga cccagttccc cctcggtgca tccgggtcat
      181 cgacgataag ggcgagagat ctggtttttg ccgggacgtt ccggatcgtg agcggtggat
      241 tcccgttcgc cccgtcgcat gtgtactccg gtgggatcat tccgttatcg ggaaaagcct
      301 ggcttgcgaa atgcagtttg ttcatcgtcc tgtcctccgc ctgaatatcc ggaatcgcaa
      361 cggttgataa ggcggcggct atcagaagcg cgacagcgaa ggatttcatg gaagcctacc
      421 tccctcgaat gtcttttccg atagagaagg cgcgccccag aagcctgccg accccgtggt
      481 aggtgttgat ctctggatcg aagagcatcg gcttcacttt ctcgatatcg acatctccct
      541 tcgcgtcgca gacggattct tccgctttta catccaggat ttccccgacg aactgggtgt
      601 gcagtccgat tgcgatggta tgtagaagtc tgcactcgat gacaagggga aactccccga
      661 tgtacggcgc atccacaagg gagctccgga cgggggtaag gccggaggta acgaacttgt
      721 cgacgttcct gccggaaacc atgccgatgt aatccacctc ccgggcatag ccctctgagg
      781 ggacattgac cgtgaatgcc ttccgctcga cgatgttccc gtaagtgtag gtggccttcc
      841 ggagcgagac ggccaagcat ggaggactgg aacagcagac cccgccccat gccgcagaca
      901 taacgttcgg tttcccttcc cggtcatagg tccccaccac ccatgccgga gtggggaaga
      961 caagcgtctt cgcgccaaag gacttcttca tgggcatatt ccccctcctt gatcactgca
     1021 ggtatttcta ttgcccctgc tctatgacgt gatcgagtga ttccattgta ccctatgggt
     1081 gcggatggaa tctccgcccg caattgggcg acttattgtt aaaattggga cgagatcgaa
     1141 accggggggt gtctcatggg cattctgcaa ggcaggaaag ggctgatcct cggcgtcgcc
     1201 aacgagaaat ccatcgcatg gggcgtggcc agggcctgtc accgcgaggg ggccgagctc
     1261 gggttcaact atctcggcga tgcgttgaag aaacgggttc atcccctggc ggagtcgatc
     1321 caatcgagat ttgtcgaacc gctcgacgtc ggcgacgacg cccagatcga cgatttcttc
     1381 gccaaggccg aggcccggtg gaaacggctc gacttcatcg tgcactccat cgccttcgcc
     1441 aacagggaat cgctgaatgg caatttccgg gatacctcac gtgccgactt ccatctcgcg
     1501 ctggatattt ccgcctactc tttcattgcc tgcgcccggc gggcggcccg gttgatggga
     1561 ccgggggggg ccatggtgac gatgagtttc ctcgggtcgg tgcgggccgt gccgaactac
     1621 aacgtgatgg gtgttgcgaa agccgccctc gaagcggcga cccgttacct ggcccacgac
     1681 ctcgggccgg acgggatccg cgtcaacgct gtctcggcag ggccgatccg tacgctggct
     1741 gcctccggcg tgggcgattt ccgcaagttg atggagaaga gcgcccgtgg cgccatgctc
     1801 cgacggaacg tgacgcagga cgaggtgggg aacgccaccg tgtacctcct ttcggactgg
     1861 gcttccggtg tgaccggcga agtgcactac gtcgacgcgg ggttcaacat cgggggcggt
     1921 gacccgggcg tcgaaccggc cgcatcgggc tccgcatccc cctcttcctg agcgttcgat
     1981 gggacggcaa ggggacaagg taatcgtgaa gcgcactggc aggatggaac tctccatcgt
     2041 gaagccgggc gcgaaaataa atggtaagac cggtaaaggg aaggaaagcc
//
LOCUS       DATGYW010000206         1663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_233265, whole genome shotgun sequence.
ACCESSION   DATGYW010000206 DATGYW010000000
VERSION     DATGYW010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233265"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..597
                     /locus_tag="VK429_02830"
     CDS             <1..597
                     /locus_tag="VK429_02830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011194956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN90777.1"
                     /translation="ATLGFGVIMKVLFDNADSFVPQLGGARGMTGIARMTGTPWVVAA
                     LVAAILVIRNLVHSTYGRALISIREDEVAAAAMGIDTFRYKVIGFTAGCAFAGVAGGL
                     YAHLYTFLHPSTFDFLKSFDVLMIVVLGGLGNLTGTLVASFAWVFLLEGMRVALPPEY
                     IEFRWVLIPLLLIVTMLVRPRGLFGVREFPFLRSKVYR"
     gene            594..1391
                     /locus_tag="VK429_02835"
     CDS             594..1391
                     /locus_tag="VK429_02835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019240243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN90778.1"
                     /translation="MILEVQGLTLHFGGIKALDGVDIRLRQGELAGIIGPNGSGKTTL
                     FNVITGIYRPDRGSVSMEGGEITGLPPHEINRLGMARTFQNIRLFRDLTVVDNVRIAH
                     HPHVRYGPVDALLRTGAFYREERRTREQVEEYLSIFSLQDRRKEIARNLPYGDQRKLE
                     IARALASCPKVLLLDEPAAGMNPSEVGTLMEFILRIRERFSLTVLLIEHQMRLVMGIC
                     ERLIVMDFGQVIARGLPGDVRRDPKVIEAYLGKRDDTAVGDIRKQVR"
     gene            1391..>1663
                     /locus_tag="VK429_02840"
     CDS             1391..>1663
                     /locus_tag="VK429_02840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013822544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN90779.1"
                     /translation="MLLTVDHLSVYYGAVQALREISFTVAKGEIVSLIGANGAGKSTT
                     LRALSGVVTPSAGSIVHDGKSIAGLPSHRIARMGIAHVPEGRGVFAN"
BASE COUNT          292 a          503 c          553 g          315 t
ORIGIN      
        1 gccacgctgg ggttcggtgt catcatgaag gtactcttcg acaacgcgga ctccttcgtg
       61 ccgcagctgg ggggcgcccg ggggatgacc ggtatcgcgc ggatgaccgg aactccctgg
      121 gtcgtcgccg cccttgtcgc cgcgatcctg gtgatccgca acctcgtcca ttcgacatac
      181 gggcgcgcac tcatctccat ccgtgaggac gaggtcgccg ccgccgcgat ggggatcgac
      241 accttccggt acaaggtgat cggctttacc gcgggatgcg ccttcgccgg ggtagcgggc
      301 ggactgtacg cgcacctgta cacatttctc cacccgagca ccttcgactt cctgaaatcg
      361 tttgacgtgc tgatgatcgt cgtcctcggg ggactgggga acctgacggg cacgctggtg
      421 gcctccttcg cctgggtgtt cctgctggag gggatgcgcg tcgcgctccc gcccgaatac
      481 atcgagttcc gctgggtcct cataccgctg ctgctgatcg tcaccatgct ggtccggccc
      541 cgggggctgt tcggcgtgcg ggagttcccg ttcctgcgga gcaaggtgta ccgatgatcc
      601 tcgaggtcca ggggctcacc ctgcactttg gggggatcaa ggccctggac ggggtagata
      661 tccggctacg gcagggtgag ctcgcgggga tcatcggtcc gaacggatcc ggaaagacca
      721 cgctgttcaa cgtgatcacc ggaatctatc gcccggaccg cggatccgtc tcgatggagg
      781 ggggagagat cacggggctt cccccgcacg agatcaaccg cctggggatg gcgaggacgt
      841 tccagaacat ccgcctcttc cgggatctga cggtggtcga caacgtgcgg atcgcgcacc
      901 acccgcacgt ccggtacgga cccgtagacg ccctgctccg gaccggggcg ttctaccggg
      961 aggagcggag gacgcgcgag caggtggagg aatatctctc gattttctcc ctccaggacc
     1021 ggcggaagga gattgcgagg aacctgccgt acggcgatca gcggaagctg gagatcgccc
     1081 gcgcccttgc gtcgtgcccc aaggttctcc tgctggacga acccgctgcg gggatgaacc
     1141 cctccgaggt gggaacgctg atggagttca tcctccggat ccgggaacgc ttctccttga
     1201 ccgtactgct gatcgagcac cagatgaggc ttgtgatggg gatctgcgag cggttgatcg
     1261 tgatggactt cggccaggtg atcgccagag gtctcccggg ggacgtccgg agggatccaa
     1321 aggtgatcga agcgtacctg ggaaaaagag acgacactgc cgtgggtgat atcaggaaac
     1381 aggttagata atgttattaa ccgttgatca tttaagcgtt tattacggag ccgttcaggc
     1441 gctccgggag atatcgttta ccgtcgcgaa aggggaaatc gtctccctca tcggcgccaa
     1501 cggtgcgggg aagagcacca cactgcgggc actctccggt gtcgtcaccc cctccgcggg
     1561 gagcatcgtg cacgacggaa aatcgatcgc ggggctccct tcccatcgga tcgcacgcat
     1621 ggggatcgcc cacgtaccgg agggtcgggg cgtcttcgcc aac
//
LOCUS       DATGYW010000207         2268 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_286896, whole genome shotgun sequence.
ACCESSION   DATGYW010000207 DATGYW010000000
VERSION     DATGYW010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286896"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..827)
                     /locus_tag="VK429_02845"
     CDS             complement(<1..827)
                     /locus_tag="VK429_02845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005993333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HLN90780.1"
                     /translation="MTLAPAPLPIAMGKKEIALLPGMANRHGLIAGATGTGKTVTLRV
                     LAERFSAIGVPVFLADVKGDLSGIPLPGGDNPKVAERVAQLKLGGFEYQGYPVIFWDL
                     FGEQGHPVRATVSEMGPLLLGRILNLNDIQCGVLTLVFKIADDNGMLLLDLKDLRSMA
                     QFVGDNADRFRTSYGNIAAASIGAIQRGLLGLEEQGGDQFFGEPALDLQDLLQTDPAG
                     RGVISILAASRLMTSPRLYSTFLLFLLSELFEQLPEVGDPQKPGLVFFFDEAHLLFT"
     gene            957..1517
                     /locus_tag="VK429_02850"
     CDS             957..1517
                     /locus_tag="VK429_02850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007527298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90781.1"
                     /translation="MLKKEDCVLYSGGAVGAEAEFGAQAERYGIEEINFTYEGRGIAR
                     SRGVRVLSREELAKGDVSLSYVSHLLHRTYTDAPTIRKVLQTIWYQVNSGHVIYVIGA
                     VLPDGTVKGGTGWGAEFAKLCNKPIFVFDQGKNAWLTWKDDRWVEPAGGQAIRIGNPC
                     FAGTGTRFLEENGRKAIRELFARSFA"
     gene            1530..>2268
                     /locus_tag="VK429_02855"
     CDS             1530..>2268
                     /locus_tag="VK429_02855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020719472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HLN90782.1"
                     /translation="MQATADIRNVAIIAHVDHGKTTLVDAMLRQSGIFSAHAAVVDRV
                     MDSLDLEREKGITIMAKNTAVIYRGVKINIVDTPGHADFGGEVERTLKMVDAVLLLVD
                     ASEGPLPQTRFVLKKALERELPVILVINKIDRPDARIDEVIDEVYDLFIDLDATEDQL
                     DFPVMMTNARAGTAAVRGEAAGRNLQPLFDAILSHVPPPTGDPSAVLQFLVTNLEYSD
                     YVGRLAVGRVFEGTLRAGEIVSLCGIGG"
BASE COUNT          403 a          747 c          756 g          362 t
ORIGIN      
        1 tccgtgaaga gcaggtgcgc ctcgtcgaag aagaagacga gcccgggttt ctgcgggtcc
       61 cccacctcgg ggagctgctc gaacagctcg gagagaagga acagcaggaa cgtggagtag
      121 agcctggggg aggtcatgag ccgggatgcg gcgaggatgc tgatcacccc gcgcccggcc
      181 ggatcggttt gaaggaggtc ctgcaggtcg agcgcgggct cgccgaagaa ttggtcccct
      241 ccctgttcct ccagtccgag aagtccacgc tggatcgccc cgatgctcgc ggcggcgatg
      301 ttcccgtacg aggtccggaa ccggtcggcg ttgtccccga cgaactgcgc catggaccgc
      361 aggtccttca ggtcgagcag cagcatgccg ttgtcgtccg cgatcttgaa gacgagggtc
      421 aggacgccgc actggatgtc gttcaggttg aggatccggc cgaggaggag aggccccatc
      481 tccgagacgg tggcgcgcac ggggtgcccc tgctccccga agaggtccca gaagatgacg
      541 ggatacccct ggtattcgaa cccgcccaat ttgagttgag ccacccgttc tgccactttc
      601 gggttatcgc cccccggcag cgggatcccg gacaggtccc ccttcacgtc cgcgaggaag
      661 accggaacgc cgatggcgct gaaccgctcc gcgagcaccc gcagagttac cgtcttgccg
      721 gtgcccgtgg cgccggcgat cagcccgtga cggttggcca tcccggggag gagggcaatc
      781 tccttctttc ccatcgcgat cggtagcggc gccggtgcga gcgtcatctg tgaacctcct
      841 ggcgtgtcgt gaagcgatcg acggattctg ccatattaca tcacaatgga gcgggatccc
      901 gccgccttcg tggtatagtg tccggtattc cacccgaccc tctcaaggag acgaagatgc
      961 tgaaaaagga ggattgcgtc ctctacagcg gcggtgccgt cggcgccgag gcggagttcg
     1021 gcgcgcaggc ggaacggtac gggatcgagg agatcaattt cacgtacgaa ggccgcggga
     1081 tcgcccgctc ccgcggcgtc cgcgtcctct cccgggagga actggccaag ggcgacgtga
     1141 gcctctccta cgtgtcgcac ctcctgcacc gcacctacac ggacgctccg acgatccgga
     1201 aggtcctgca gacgatctgg taccaggtca actccggcca cgtgatctac gtgatcggcg
     1261 cggtcctccc cgacgggacg gtcaagggcg gcaccgggtg gggagccgag ttcgcaaagc
     1321 tgtgcaacaa gccgatcttc gtcttcgacc aggggaagaa cgcatggctc acctggaagg
     1381 acgaccggtg ggtcgaaccg gcgggcggcc aggcgatccg catcggcaac ccgtgcttcg
     1441 ccgggacggg aacccgcttc ctcgaggaga acggccggaa ggcgatccgg gagctctttg
     1501 cgcgttcctt cgcgtaacgc cccccgatga tgcaggcgac cgccgacatc cggaacgtcg
     1561 cgatcattgc gcacgtcgac cacgggaaga ccaccctggt ggacgcgatg ctgcgccaga
     1621 gcggcatctt cagcgcccac gcggccgtcg tcgaccgggt gatggactcc ctcgatctcg
     1681 agcgggagaa ggggatcacg atcatggcga agaataccgc cgtgatctac cggggcgtca
     1741 agatcaacat cgtggatacc cccggtcacg ccgacttcgg cggcgaggtg gagcggacgc
     1801 tgaaaatggt cgacgcggtg ctcctgctcg tggacgcctc cgagggcccc cttccgcaga
     1861 cccgcttcgt gctgaagaaa gccctcgagc gggagctccc cgtcatcctc gtcatcaaca
     1921 agatcgaccg gcccgacgcc cggatcgacg aggtgatcga cgaggtctac gaccttttca
     1981 tcgacctcga cgccacggaa gaccagctcg acttcccggt catgatgacg aacgcccggg
     2041 cgggcacggc ggccgtccgc ggggaagcgg cgggacggaa cctgcagccc ctcttcgacg
     2101 cgatcctctc ccacgtgccg ccccccaccg gcgacccgtc ggccgtcctc cagttcctcg
     2161 tgaccaacct cgagtacagc gactacgtcg ggcggctcgc cgtcgggcgg gtcttcgagg
     2221 ggacgctgcg cgccggggaa atcgtctccc tgtgcgggat cggcgggg
//
LOCUS       DATGYW010000208         2358 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_287106, whole genome shotgun sequence.
ACCESSION   DATGYW010000208 DATGYW010000000
VERSION     DATGYW010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2358
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287106"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VK429_02860"
     CDS             complement(<1..345)
                     /locus_tag="VK429_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019933268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HLN90783.1"
                     /translation="MKWKGILLAGGAGTRLHPITKAVSKQLLPIYDKPMIYYPLSVLM
                     LSGIRDILLISTPIDLPRFQDLLGDGSQWGIRISYAEQPRPEGLAQAFLIGKKFIGQE
                     KVCLILGDNIFHG"
     gene            623..>2358
                     /locus_tag="VK429_02865"
     CDS             623..>2358
                     /locus_tag="VK429_02865"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HLN90784.1"
                     /translation="MALFDIAGIPRCTIDFPPEISPDEIVSLSGPVNTLLKSSYLLGA
                     TFEIEAIFNSLFDIAEEIAGVEACGFLSCEGADSGSWEVRLSRRIDANQASPALLSFL
                     VAPGAISSHFDKPVSMDPDWGLWSKPICEAWSSRSLVAFPLHRDRDIAGAVVFGKRDS
                     HPFTPVQVKLLWALSLQAETHLHRADSGKTLSLYSFLDPLTHLYNPRYFDNQLEKEIL
                     RSRRSGGSFSLMRFDIDGFTEYNERFTNTAGDIALQEFAGILSGSVREVDTVARLGGD
                     EFGILLVEGTTEGGRALAHRIIERFQRHLLPGEQESRTERLSVSVGVASFPSDSFDKA
                     DLESKVDRALRMASSKGGGQVLSYHEAADAEGMKSALTELPVQKIYDAARSVVDMDKF
                     LEILLFTGMQGLSAGRGSIVVRDTEGDFTLRAAIGFSKHEEHVTAPGVFHAGPITNWV
                     VDHQLPLVVTKPEDSPCAVQLKKNGYQTESFLSIPLTHHGKTFGALHLTNRKDHKEFT
                     RDDLKTFAPMASEIAAILAQGIGFRENVRTFSLSILTSLSDALELRFPFFSGHSKRVR
                     DLSTRIGERLGLT"
BASE COUNT          449 a          750 c          668 g          491 t
ORIGIN      
        1 accgtgaaaa atgttgtcgc cgaggatcag gcacaccttc tcctgtccga tgaacttctt
       61 gccgatcaga aacgcctgcg ccaggccttc ggggcgcggc tgttccgcat acgagatccg
      121 gatcccccac tgggagccgt ctcccagcag gtcctggaac cggggcaggt cgatcggggt
      181 ggagatgagc aggatgtccc ggatgccgga gagcatcagg acggagagcg gatagtagat
      241 catcggcttg tcgtagatgg ggaggagctg cttgcttacc gccttggtga tcgggtgaag
      301 gcgggtcccc gctcccccgg ccaggaggat acctttccat ttcacgggac cttcggacgg
      361 tttcacctct tcgctccttt cgcttcacta tgagccatcg gtaatgaata catatttcct
      421 gttcataaag ttaagtgata tatttccaca tatggacaaa tcatttcctc gaaagaaatc
      481 gttctacgct ccctgtcgcg aatctgtctg tttcaacaag ggtattcatt ccaccctctt
      541 atcggaatat aggcccaaaa cttgctaaac tattgtcggc tccagaattt ctgtcgaaat
      601 cgatagcata ccggggaacg agatggcatt gttcgacatc gctggaattc ctcgctgcac
      661 catcgacttc cccccggaaa tttcccctga cgagatcgta tcactctccg ggccggtcaa
      721 caccctcctg aaaagcagtt acctcctcgg agccaccttc gagatcgagg ctattttcaa
      781 ttccctgttc gacatcgccg aggagatcgc cggagtcgag gcgtgcgggt tcctctcctg
      841 cgagggggcc gattccggat cctgggaggt ccgtctcagt cgccgcatcg atgcgaacca
      901 ggcttccccg gccctcctct ccttcctggt cgctcccggg gcgatctctt cgcacttcga
      961 caaacccgtc tccatggatc cagactgggg tctctggtcc aagcccatct gcgaagcctg
     1021 gtcttcccgt tccctggtgg cgttccccct gcaccgtgac cgcgatatcg caggcgccgt
     1081 cgtcttcggc aagcgggatt cgcatccctt cactcccgta caggtgaagc ttctctgggc
     1141 gctttcgctc caggccgaga cccacctgca tcgggctgat tccggaaaga ccctgtcttt
     1201 gtactctttc ctcgatccgt tgacacacct ctacaatccc cggtacttcg ataaccagct
     1261 cgaaaaagag atcctccgct cacgccgcag cggcggatcg ttcagcctga tgcggttcga
     1321 catcgacggc ttcacggaat acaacgaacg gttcacgaac accgccggcg acatcgccct
     1381 gcaggaattc gccggcatct tgagcggatc cgtacgggag gtcgacacgg tggcgcgtct
     1441 cggcggggac gaattcggca tcctcctggt ggaaggaact acggaagggg ggcgcgccct
     1501 ggcgcatcgc atcatcgagc ggttccagcg gcacctgttg ccgggggagc aggaatcccg
     1561 caccgagcgg ctgtcggtca gcgtcggcgt ggcgtcgttc ccctccgact ccttcgacaa
     1621 ggccgacctt gagagcaagg tcgatcgggc gctccgcatg gccagcagca aggggggcgg
     1681 ccaggtcctc tcctaccacg aggccgctga cgccgagggg atgaaaagcg ctcttacgga
     1741 gcttccggtc cagaagatct acgacgcggc ccgctccgtg gtcgacatgg acaaattcct
     1801 ggagatcctc ctgttcacgg gcatgcaggg gctctccgcg gggcgcggtt ccatcgtcgt
     1861 gagggacacc gagggggact tcaccctgcg cgcggcgatc ggtttttcca aacatgagga
     1921 gcatgtcacc gcgccggggg tgttccacgc cggcccgatc accaactggg tagtggacca
     1981 ccagttgccg ctggtagtca ccaaacccga ggactcccca tgcgccgtac agctcaagaa
     2041 gaatggctac cagacggaat cgttcctttc gatcccgctg acacatcacg gtaaaacgtt
     2101 cggggcgctt catcttacga accggaaaga ccacaaggag ttcacacgcg acgatctgaa
     2161 gacgttcgcg ccgatggcgt ccgagatcgc cgcgatcctg gcccagggga tcggattccg
     2221 ggagaacgtc cgcaccttct ccctttccat cctcacctcc ctgtcggacg cgctcgagct
     2281 gcgcttcccc ttcttctccg gtcactcgaa acgggtgcgt gacctgtcca cgaggatcgg
     2341 cgagaggctg gggcttac
//
LOCUS       DATGYW010000209         1502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_337601, whole genome shotgun sequence.
ACCESSION   DATGYW010000209 DATGYW010000000
VERSION     DATGYW010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337601"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..231)
                     /locus_tag="VK429_02870"
     CDS             complement(67..231)
                     /locus_tag="VK429_02870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90785.1"
                     /translation="MRRFSKPILLLLCALSLLSSCASSNKATKEWKPGDTVICPHCGR
                     EFPVPEKLGK"
     gene            341..1126
                     /locus_tag="VK429_02875"
     CDS             341..1126
                     /locus_tag="VK429_02875"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015837967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HLN90786.1"
                     /translation="MGNRELLEFAEELARGGGRILRKSYGRQQTIHFKGEINLVTDVD
                     HESERYILGRIRERFPDHGVMSEESPERRSPSPYRWIVDPLDGTTNYAHGYPCFCVSV
                     AVEREGAVVAGAVYDPLLDESFTAAKGEGAFRNGERIAVSKIAELRKSLLATGFAYDV
                     NTSTDDNFDYFRAFVLTGQAIRRDGSAALDLCYLACGRFDGFWELKLKPWDTAAGLLV
                     LHEAGGRSTRLDGGPYDIHQPDLLASNGLIHAQMVEVLRRAKK"
     gene            complement(1175..>1502)
                     /locus_tag="VK429_02880"
     CDS             complement(1175..>1502)
                     /locus_tag="VK429_02880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2155 domain-containing protein"
                     /protein_id="HLN90787.1"
                     /translation="KAGWKAVKIEVEYKEKKSKKAFTIPLNSEFKVPDTDLTLKVGNF
                     LPHFSMGGDQITSSSNNPENPAAQLEVFQGGKEVFHGWLFALHPTVHPFTNDKYGVTL
                     LEGVKK"
BASE COUNT          255 a          466 c          515 g          266 t
ORIGIN      
        1 gccaagcgga tccgccccct tcccgttcgc gacaggatcc cacgataccg gttctcccgg
       61 gcgtaatcac tttccgagct tctccgggac cgggaactcg cggccgcaat gggggcagat
      121 cacggtgtcg cccggcttcc attccttcgt agccttgttc gaggaggcgc acgaggaaag
      181 gagggacagt gcgcagagca gcaggaggat cggcttggag aatcgtctca tcgcggggtc
      241 tccctgcgcc gttcttcccg cgcggaactt ttcggggcgc ggcgcgaccc gcatattata
      301 atcggcgctg gatccatgag gcgggaaaaa gggggggacg atgggaaatc gggaattgct
      361 ggagttcgcc gaggaactgg cccgcggggg gggccggatc ctccggaaaa gttacggacg
      421 ccagcagacg atccacttca agggggagat caacctggtg accgacgtgg accacgaatc
      481 ggagcggtat atcctcgggc ggatccggga acggttcccg gaccacgggg tgatgtcgga
      541 ggagagcccg gagcggcgtt ccccgtcgcc gtaccggtgg atcgtcgatc ccctcgacgg
      601 aaccacgaat tacgcgcacg ggtacccgtg cttctgcgtc tccgtggccg tggagcggga
      661 aggcgcggtc gtggccggtg cggtgtacga ccccctgctc gacgaatcgt tcacggcggc
      721 gaaaggggag ggggcgttcc ggaacgggga acggatcgcc gtttcgaaga tcgccgagct
      781 gcggaagtcg ctcctggcca ccggcttcgc ctacgacgtg aacacgtcca cggacgacaa
      841 cttcgactac ttccgggcgt tcgtgctgac cgggcaggcg atccgccggg acggctccgc
      901 ggcgctggac ctttgctacc tggcgtgcgg gcggttcgac gggttctggg agctgaagct
      961 gaagccctgg gacacggcgg cggggctcct cgtcctccac gaggcggggg ggcgctcgac
     1021 ccggctcgac ggcgggccgt acgacatcca tcagccggac ctgctcgcct ccaacggcct
     1081 catccacgcg cagatggtgg aggtgctgcg gagggcgaaa aaataagggg gcggcccgaa
     1141 ggccgccccc ccgcatcgtc gggtggaacg cgcgttactt cttgacccct tcgaggagcg
     1201 tcaccccgta cttgtcgttc gtgaacgggt gcaccgtcgg gtgcaacgca aacaaccagc
     1261 cgtggaagac ctccttccct ccctggaaca cctccagctg ggcggcgggg ttctccgggt
     1321 tgttcgagct ggacgtgatc tggtcacccc ccatcgagaa gtgcggcagg aagttcccga
     1381 ccttcagcgt gagatcggtg tcgggaacct tgaactcgga gttcaggggg atggtgaacg
     1441 ccttcttgct cttcttctcc ttgtattcca cttcgatctt gacggctttc cacccagcct
     1501 tc
//
LOCUS       DATGYW010000210         1923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_337670, whole genome shotgun sequence.
ACCESSION   DATGYW010000210 DATGYW010000000
VERSION     DATGYW010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337670"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..813
                     /locus_tag="VK429_02885"
     CDS             <1..813
                     /locus_tag="VK429_02885"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HLN90788.1"
                     /translation="RTVGRPFLPGSPGHLLYNALLGTGLVFGAPVWIPWVLLSRKRRA
                     NLPDRIGLRGAPRQTPVDGRPTVWVHAVSVGETLAAVPLLRLLRRRLPDARLLVSSVT
                     LTGRETAVKSLSGVTDEGFFFPFDLPGLCGRFLDRVRPDVVVIVETEIWPNFIAACAR
                     RGVPVVIVNGRLSKRSFAGYMRFRWFFAPILRTLRTISAQTAEDAERFAALGAPREIV
                     TVGGNLKFDVSPPESGASPLSGLLLREKAAGASWIVAGSTRSRRCSIVKGYP"
     gene            810..1238
                     /locus_tag="VK429_02890"
     CDS             810..1238
                     /locus_tag="VK429_02890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90789.1"
                     /translation="MMRRTAIPEGAGHLQETVLLLDTVGELSGAYAAADLAFVGGSLV
                     PKGGHNVLEPSWHGVPTIVGPHMENFREIADAFFAGDALIRVAGEEELADRLSRFAAD
                     PRIFRDTGLRAKGLLETFRGASEASTDAVVSALPGRGARG"
     gene            1235..>1923
                     /gene="lpxK"
                     /locus_tag="VK429_02895"
     CDS             1235..>1923
                     /gene="lpxK"
                     /locus_tag="VK429_02895"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HLN90790.1"
                     /translation="MILGAAARARRILSSAGFLPASHLPRPVVSVGNLVMGGAGKTPH
                     VIHLARWLTGQGRRVGILSRGYGRKSRGVRWVSDGEGSIATAAEGGDEPVLIARSLPG
                     IPVAVGESRAAAGREILSRRSVDVFLLDDGFQHLSLRRDADLLLVECGSGLGNRWTAP
                     LGPLREPPSHARFADALVITKCPDAESGARTARSVPFPDGRPRAYSRLSPGGIVGRDG
                     LPSKDAVAGSAV"
BASE COUNT          229 a          652 c          707 g          335 t
ORIGIN      
        1 aggacggtgg ggcgtccgtt ccttcccggg agcccggggc accttttata caacgctctg
       61 ctcgggaccg ggctcgtctt cggcgctccc gtctggatcc cgtgggtcct cctctcccgg
      121 aagcggaggg cgaacctgcc ggaccggatc ggactccgtg gagccccccg gcagacgccc
      181 gtggacggac gcccgaccgt atgggtccac gcggtgtccg tgggggagac gctcgccgcc
      241 gtccccctcc tgcgccttct gcggcgacgt ctccccgacg cccggctcct cgtatcgagc
      301 gtgacgctga ccgggcggga gacggcggtc aaatccctct ccggcgtcac cgacgaagga
      361 ttcttcttcc cgttcgatct tccggggctc tgcgggcggt tcctcgaccg ggtgcggccg
      421 gacgtcgtgg tgatcgtgga gaccgagatc tggcccaatt tcatcgccgc gtgcgcgcgc
      481 cgcggggttc ccgtggtgat cgtcaacggc cgattgtcga agcgctcgtt cgcggggtac
      541 atgcggttcc ggtggttctt cgcccccatt ctccggacgc ttcggacgat ctcggcccag
      601 acggccgagg atgcggagcg gttcgccgcg ctgggggctc cgcgggagat cgtcaccgtg
      661 ggggggaacc tgaagttcga cgtttccccc cccgaatccg gcgcgtcgcc gctttccggc
      721 ctgctcctgc gggagaaggc cgcgggagcc tcgtggatcg tcgccggttc gacgcggtcg
      781 cggcgatgct ccatcgtgaa ggggtatcca tgatgcgccg cactgcgatc ccggaggggg
      841 cggggcatct ccaggaaacg gttcttctcc ttgacacggt cggcgagctt tcgggcgcgt
      901 acgcggcggc cgacctcgcg tttgtcggcg gcagcctcgt tccgaagggg ggccacaacg
      961 tcctcgagcc gtcgtggcac ggcgtgccga cgatcgtcgg ccctcatatg gaaaatttcc
     1021 gcgagattgc ggacgcgttc ttcgccgggg atgccctgat ccgggtcgcc ggggaggagg
     1081 agctcgcgga tcggttgtcg cggttcgcag cggatccgcg gatcttccgc gataccggcc
     1141 tgcgcgcgaa gggattgctg gaaacgttcc gcggcgcctc cgaggcgagc acggacgcgg
     1201 tcgtgtcggc gcttccgggc cgcggggcgc ggggatgatc ctcggggccg ccgccagggc
     1261 gcggcgcatc ctttcctctg cgggcttcct tccggcctca caccttccac ggccggtcgt
     1321 gagcgtcgga aacctcgtga tgggaggcgc cgggaaaacg ccccatgtca tccacctcgc
     1381 gcggtggctc accgggcagg ggaggcgcgt cgggatcctg tcccgcggct atggacggaa
     1441 aagccgcggc gtccgttggg tgtccgacgg ggaaggatcg atcgccaccg ccgccgaggg
     1501 cggggacgag ccggtgctga tcgcccgctc cctgcccggg atcccggtcg ccgtgggcga
     1561 gtcccgtgcc gctgcggggc gggagatact gtccaggcgg agcgtggacg tgttcctcct
     1621 cgacgacggg ttccagcacc tctccttgcg gcgggatgcc gatctcctcc tggtcgagtg
     1681 cggcagcggt ctcgggaacc ggtggacggc gccgttgggt ccgctccggg agccgccttc
     1741 ccacgcgcgg ttcgcggacg cgctggtgat cacgaaatgt cccgacgcgg aatccggtgc
     1801 gaggacggcg cgctccgtcc cctttccgga tgggcgcccc cgggcctatt cgcgtctgtc
     1861 gcccggaggg atcgtgggtc gggacggcct tccctcgaag gacgccgtgg ccgggagcgc
     1921 ggt
//
LOCUS       DATGYW010000211         2607 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_287432, whole genome shotgun sequence.
ACCESSION   DATGYW010000211 DATGYW010000000
VERSION     DATGYW010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2607
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287432"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..282)
                     /locus_tag="VK429_02900"
     CDS             complement(<1..282)
                     /locus_tag="VK429_02900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013181975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN90791.1"
                     /translation="MLTVTNLAKSYGRQTLFEGASFQVAPGERVGVVGRNGSGKTTLF
                     RILLGEEAADSGAVTVPAGYRIGYLAQHLRFDHTTVLAEAASALPPREDG"
     gene            complement(399..475)
                     /locus_tag="VK429_02905"
     tRNA            complement(399..475)
                     /locus_tag="VK429_02905"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(439..441),aa:Asp,seq:gtc)
     gene            630..2354
                     /gene="ilvB"
                     /locus_tag="VK429_02910"
     CDS             630..2354
                     /gene="ilvB"
                     /locus_tag="VK429_02910"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020719544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HLN90792.1"
                     /translation="MSKLMTGANILVECLLREGVDCLFGYPGGVTLPFYDVLYDAKVK
                     HYLVRHEENACFAAQGYARSTGKVGVCCATSGPGATNLVTGLVDALLDSIPIVAITGQ
                     VSTKLIGSDAFQEADTFGITRSCTKHNFLVKTAADLPQAIHEAFYIAASGRPGPVLVD
                     IPKDVFMGNAHYEPVGVIHLPGYKFSSEGHAGQIRRAAEMMWEAQRPIVYAGGGVISA
                     GASGSLRELVETIDAPAVCTLMGLGALPSSHPNFISMPGMHGSYAANMAMTHTDLIIA
                     LGARFDDRVTGRLDAFAPHARVIHVDIDPVEIGKNRAADLPIVGDLGPVLGKMNTVLA
                     ELAPSHKAWRASDRKEWKQKIASWAAEHPLRPSVSDTEIKPQHLVREIDRLSGGDAIV
                     CSDVGQHQMWGAQFLRFNRPRLWLSSGGLGSMGFGLPSAIGAQIANPGRLVFALVGDG
                     GFQMSIPELGTVANNRLPIKIVVMNNGYLGMVRQWQELFYNNRLSAVALDGFPDASML
                     AGAYGFPGRTVDDPGDIVQALDDAVRHPGPYLLNVKVSSFECVYPMVPAGGAIDEMVL
                     GPPKAMAI"
     gene            2394..>2607
                     /gene="ilvN"
                     /locus_tag="VK429_02915"
     CDS             2394..>2607
                     /gene="ilvN"
                     /locus_tag="VK429_02915"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011681969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HLN90793.1"
                     /translation="MLQTISLLVENKPGALMRVTGVLSARGWNIDSLTVARTLDAAQS
                     RMTIVVDIDPVLRRQVIKQMNKLINVL"
BASE COUNT          461 a          865 c          867 g          414 t
ORIGIN      
        1 gccgtcttcg cgcgggggga gcgccgaggc cgcctccgcg agcaccgtcg tgtggtcgaa
       61 ccggagatgc tgcgcgaggt acccgatccg gtacccggcg ggaacggtca ccgcgccgga
      121 atcggccgcc tcctccccga ggaggatccg gaacagcgtg gtctttcccg acccgttccg
      181 tcccaccacc cccacccgct cgccgggcgc cacctggaac gaggccccct cgaacagggt
      241 ctgcctccca tacgatttgg cgaggttggt gacggtcagc atggacgttt ccaggacaac
      301 ggcggctccg atttccctgc gatcgaggag atggcacgac acggagaaaa gcagaaagcc
      361 cccccggacc gactacccgg aggggctccg aatgttcatg gcggggtgga cgggacttga
      421 acccgcggcc tccggcgtga caggccggcg ttataaccag cttaactacc accccatcaa
      481 gcaaaggaaa cttatacatg acccggtccg cactgtcaac acggcgcccg agatcgaaat
      541 gcgctccgcc ggacggaaac caatggcgaa accgtgcgtc caataaaggc aaaccggcgt
      601 tcgccgaccc ccccggaaag ggacccgaca tgtcgaagct gatgaccggc gcgaacatcc
      661 tggtggagtg ccttctccgc gaaggcgtcg attgcctctt cgggtatccc ggcggcgtga
      721 ccctcccctt ctacgacgtt ctctacgacg ccaaggtcaa gcactacctc gtccgccacg
      781 aggagaacgc ctgcttcgcg gcgcaagggt acgcccgctc caccgggaag gtcggcgtct
      841 gctgcgcgac ttcggggccg ggggcgacga acctcgtcac cgggctggtg gacgcccttc
      901 tcgactcgat ccccatcgtg gcgatcaccg ggcaggtctc gacgaaactg atcggaagcg
      961 acgcgttcca ggaggcggac acgttcggca tcacccgctc ctgcacgaag cacaacttcc
     1021 tcgtgaagac cgccgccgac cttcctcagg cgatccacga ggcgttctac atcgccgcca
     1081 gcggacgtcc gggcccggtc ctggtggaca tcccgaagga cgtcttcatg ggaaacgcgc
     1141 actacgagcc ggtcggggtg atccacctgc cggggtataa attctcctcc gagggacacg
     1201 cgggacagat ccggcgggcg gcggagatga tgtgggaggc gcagcggccg atcgtctacg
     1261 cgggcggcgg ggtgatctcc gcaggcgctt ccgggtcgtt gcgcgagctc gtggaaacga
     1321 tcgacgcgcc tgccgtgtgc acgctgatgg ggctcggggc gctcccctcc agccacccga
     1381 acttcatcag catgcccggc atgcacggaa gctacgccgc gaacatggcg atgacccaca
     1441 ccgacctgat catcgcgctg ggcgcccgct tcgacgaccg cgtgacgggg cggctcgacg
     1501 ccttcgcccc ccatgcgcgg gtcatccacg tggacatcga ccccgtcgag atcgggaaaa
     1561 accgggcggc ggaccttccg atcgtcgggg acctcggacc ggtcctcggg aagatgaaca
     1621 cggtcctcgc ggagctcgct ccctcccaca aggcctggcg tgcgtccgat cggaaggagt
     1681 ggaagcagaa gatcgcatcg tgggccgcgg agcaccccct ccgcccttcc gtgtccgaca
     1741 ccgagatcaa gccgcagcac ctggtgcgcg agatcgaccg cctctccgga ggggacgcca
     1801 ttgtctgttc cgacgtgggg cagcaccaga tgtggggagc gcagttcctg cggttcaacc
     1861 ggccgcggct gtggctcagc tccgggggcc tcggctcgat gggtttcggg ctcccttccg
     1921 ccatcggcgc gcagatcgcc aacccgggcc ggctcgtctt cgccctggtg ggggacggcg
     1981 gcttccagat gtcgatcccc gagctgggca cggtggccaa taaccgcctt ccgatcaaga
     2041 tcgtcgtgat gaacaacggg tatctcggga tggtgcggca atggcaggag ctgttctaca
     2101 acaaccggct ctccgccgtg gccctcgatg gatttcccga cgcatcgatg ctggcggggg
     2161 cgtacgggtt ccccgggcgg acggtggacg atccgggtga tatcgtgcag gcgctggacg
     2221 acgcggtccg tcacccgggg ccgtacctgc tgaacgtcaa ggtgtcgtcg ttcgagtgcg
     2281 tctacccgat ggtcccggcc ggtggggcga tcgacgagat ggtgctgggc ccgcccaaag
     2341 caatggcgat ttaggcagat catcgggaaa tcccggtgga gggtagacga gcgatgcttc
     2401 agacgatatc tctgctggtg gagaacaagc cgggggcgct gatgcgggtc accggggtgt
     2461 tgagcgcccg ggggtggaac atcgacagcc tgacggtcgc gcgcaccctc gacgcggcgc
     2521 agtcccgcat gacgatcgtg gtggacatcg atccggtcct gcggaggcag gtcatcaagc
     2581 agatgaacaa gttgatcaac gtgctcc
//
LOCUS       DATGYW010000212         1873 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_12938, whole genome shotgun sequence.
ACCESSION   DATGYW010000212 DATGYW010000000
VERSION     DATGYW010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1873
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12938"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..691)
                     /locus_tag="VK429_02920"
     CDS             complement(<1..691)
                     /locus_tag="VK429_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018233417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NmrA/HSCARG family protein"
                     /protein_id="HLN90794.1"
                     /translation="MDDKKIIAVVGATGAQGGGLCRAILKDAGGGYRVRALTRNAGSD
                     KAKELKKLGADVGEVDIDDAESLKRAFRGAHGAFCVTFFWEHFSPEKELAEAKNMADA
                     AKHAGVRHVIWSTLEDTREWVPLGDRRMPTLMGKYKVPHFDAKGEANRFFSESGLPTT
                     FLLTSFYWENMIHFGMGPKRGEDGNLYITFPMSDKKLPGIASEDIGKCAYAIFRKGSE
                     FIGKTVGIAGGH"
     gene            898..>1873
                     /locus_tag="VK429_02925"
     CDS             898..>1873
                     /locus_tag="VK429_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012527741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLN90795.1"
                     /translation="MSRQTNRPLTVVSLLLGLFLAALEMTVVSTAMPTAVGELGGIHL
                     YAWVFAAYMLTATVTLPIYGKLADLYGRKPVMLVGLALFLGGSFLCGHARSMNTLILF
                     RAIQGFGAGAIQPIAMTIVGDLFDVHQRARIQGILGAVWGLAGLIGPVLGGAIVHWLS
                     WRWVFYVNIPLGLACAAVLTFAYHETVGRQGHRLDFAGAALLSVTVVLALLAARSRAE
                     GLGFLPPAAVALALFLWVERRAEEPILPLDLFSRRVMAVASATGALVGAAMISVVTFV
                     PLYVQSVLAGSPTDAGTAIAPIAIGWPISSTLAGRILPRTGYRALIRGG"
BASE COUNT          258 a          659 c          553 g          403 t
ORIGIN      
        1 ggtgaccacc ggcgatgccg acggtcttgc cgatgaattc gctgcctttc ctgaagatgg
       61 cgtaagcgca tttcccgatg tcttcggagg cgatgccggg gagcttcttg tcgctcatgg
      121 gaaaggtgat ataaagattc ccgtcctcgc cccttttcgg ccccatcccg aagtggatca
      181 tgttctccca gtaaaacgat gtcagcagga aggtcgtcgg aagaccgctc tcggagaaaa
      241 accggttggc ctctcccttg gcgtcgaagt gcggcacctt gtacttcccc ataagggtgg
      301 gcattcggcg gtcgccgagg gggacccact cccgggtatc ctcaagcgtc gaccagatga
      361 cgtgccgcac gccggcgtgt ttcgccgcgt ctgccatgtt tttcgcctcc gccagctcct
      421 tttcggggga aaagtgctcc cagaagaagg tgacgcagaa cgccccatgg gctccccgga
      481 acgccctctt caggctctcc gcgtcgtcga tgtcgacctc cccgacatcc gcgcccagct
      541 tcttcagctc tttcgccttg tcggatcccg cattcctcgt cagggcgcgg accctgtacc
      601 cgccgcccgc gtccttcagg atggcacggc acaagcctcc cccctgcgcc ccggttgctc
      661 caacgaccgc gatgatcttc ttgtcgtcca cggaaatcct cctttgcgct ttgcgtctgc
      721 ctcccgttct ccggagggat gcctcgttga cgaattccca cctcgcttaa cccattggat
      781 atttccgaac cggcgaagga ttcccactcc caccgttttc tccagggttc cagattgatc
      841 cctcggacgt cctccgtcgt gagaaactgt tctttaaccc gtggaacgga gcaggacttg
      901 tctcgccaga ccaatcgccc tctgaccgtc gtctctttgc tgctcggcct ctttctggcg
      961 gccttggaga tgaccgtcgt gtccacggcg atgcccaccg ccgtcgggga gctcggcggg
     1021 atccacctct acgcctgggt gttcgccgcc tacatgctca cggcgaccgt gaccttgccc
     1081 atctacggca agctcgcgga cctttacggc cgcaagccgg tgatgctcgt cggcctcgcc
     1141 ctgttccttg gaggctcctt tctctgtggt cacgcccgca gcatgaacac gctcattctc
     1201 ttccgggcga tccagggatt tggcgccggc gccatccagc ccatcgccat gaccatcgtg
     1261 ggcgatctct tcgacgtcca ccagcgggcc cggatccagg ggatcctcgg cgcggtctgg
     1321 gggctcgccg gcctcatcgg tccggtcctc ggaggggcaa tcgtccattg gctctcctgg
     1381 cgctgggtat tctacgtgaa catcccgctg ggcctggcgt gcgcggcggt gctgaccttc
     1441 gcctaccacg aaacggtggg acggcagggc caccgtctcg atttcgccgg tgcggcgctg
     1501 ctttcagtca ccgtggttct cgcgcttctc gcggcccgct cccgggcgga gggcctcggc
     1561 tttctccccc cggccgccgt tgcgctggcg ctcttcctgt gggtggaacg ccgcgcggaa
     1621 gaacctatcc ttccgctcga ccttttctca cgccgtgtca tggccgtcgc ctcggcgacc
     1681 ggagcgcttg tgggcgcggc catgatttcg gtggtaactt tcgtgcccct gtacgtgcag
     1741 agcgtcctcg ccgggagccc gacggacgcc gggaccgcga tcgccccgat cgccatcggg
     1801 tggcccatct cctcgacgct ggcggggcgg atcctgccgc ggacggggta ccgggcgctc
     1861 atccgcggag gcc
//
LOCUS       DATGYW010000213         1580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_337989, whole genome shotgun sequence.
ACCESSION   DATGYW010000213 DATGYW010000000
VERSION     DATGYW010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337989"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..787)
                     /gene="selD"
                     /locus_tag="VK429_02930"
     CDS             complement(<1..787)
                     /gene="selD"
                     /locus_tag="VK429_02930"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HLN90796.1"
                     /translation="MLSALPPPNDPRVLVGTSHADDAGVFRLSAEEALIGTLDFFTPI
                     VDDPYLYGSIAAANSLSDVYAMGGEPLFALAIAAFPEDPKILTHLADVMVGAADKAKE
                     AGICIIGGHTIKDKEPKFGLSVTGRVHPDRLWHNRGAKPGDAIVLTKPLGTGIATSAI
                     KWGICPKGTEETVIASMGRLNANASKAGREVGISTATDVTGFGLIGHLLEVLEGSGLT
                     AEVRLADVPVFDGVRDLMRRKRIDALTGVRPFPGSKWIHGAFGH"
     gene            complement(902..1381)
                     /locus_tag="VK429_02935"
     CDS             complement(902..1381)
                     /locus_tag="VK429_02935"
                     /inference="COORDINATES: protein motif:HMM:NF018184.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HLN90797.1"
                     /translation="MTPFHEIKTVPPVTAIGMRGDMSLWDVDTAFGRLYDKALEGRLM
                     FREPAIGVRHGEVRIPDAFRSEYHVLFPLNDPPGVEIPGAEIVDLPGAEVASFVHRGP
                     YEWIQCTYEMVLDWLREHRYEAAGEAREVFFVAPEPHSGGTQDDMLTEIQVPIRPTA"
BASE COUNT          272 a          538 c          494 g          276 t
ORIGIN      
        1 gatgcccgaa ggcgccgtgg atccacttcg accccgggaa cggccgtacg ccggtcaacg
       61 cgtcgatgcg cttcctccgc atcaggtccc gcacgccgtc gaagaccggg acgtccgcga
      121 gccggacctc ggcggtcaga ccgctcccct ccagcacctc cagcaggtgc ccgatcagac
      181 cgaatccggt cacatcggtg gcggtggaga tcccgacctc ccgccccgct ttcgaggcgt
      241 tcgcgttcag ccgccccatc gaggcgatca ccgtctcttc cgtccctttc gggcagatcc
      301 cccacttgat cgccgaggtc gcgatgccgg tccccagggg cttcgtcagg acgatcgcat
      361 cgccgggctt cgccccgcgg ttgtgccaca gccggtcggg atggacccgg ccggtgaccg
      421 agaggccgaa cttcggctcc ttgtccttta tcgtgtggcc cccgatgatg cagatcccgg
      481 cctccttcgc cttgtccgcc gcgccgacca tgacatccgc gaggtgcgtc aggatcttcg
      541 ggtcctcggg gaaggcggcg atggcgagcg cgaagagcgg ctcccccccc atcgcgtata
      601 cgtcgctcag ggaattggcg gcagcgatcg aaccgtacag gtacggatcg tcgacgatcg
      661 gcgtgaagaa gtcgagggtg ccgatgagag cttcctccgc ggaaaggcgg aagacccccg
      721 cgtcgtcggc gtgggaggtg cccacgagca cacgtggatc gttgggcggc ggcaaggcgg
      781 acagcacgcg ggcaaggacc ccctgcccca gctttgacgc tcaaccggcg caggacgaca
      841 gatgggtcag gaagatcttc tcccgatcgc tcacgcctcc ctcatccccc gggaaaccgg
      901 ttcacgccgt gggacggatg gggacctgga tctcggtcag catatcgtcc tgggttcccc
      961 ccgagtgcgg ctccggagcc acgaagaaga cctctcgcgc ctcccccgcg gcctcgtacc
     1021 ggtgctcccg gagccagtct aacaccattt cataggtgca ctggatccac tcgtagggcc
     1081 cgcggtgaac gaaggaggcg acctccgccc ccggcagatc gacgatctcg gcgcccggga
     1141 tctccactcc cggtggatcg ttcaggggaa agaggacgtg gtattcggac cggaaagcgt
     1201 cggggatccg gacctccccg tgacgcactc cgatggccgg ctcgcggaac atcagccgtc
     1261 cctccaacgc cttgtcgtag agccgcccga aggcggtgtc gacgtcccac agcgacatgt
     1321 cgccgcgcat gccgatcgcc gtgacggggg gaacggtctt gatctcgtgg aagggggtca
     1381 tcgtgcggtc tcctctccgg cggattcctg ttcgatcgac aattagatgg cgcctgccca
     1441 ccgggcggat tccctccccg ggacgttttc aggtaaacga caataaaact gcgtttacaa
     1501 ttcccttgac accggttttt cgtttgaggt agaagatagg gaaatcttat tttacagggt
     1561 aaaaccgctt ctccccgaaa
//
LOCUS       DATGYW010000214         2386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_13268, whole genome shotgun sequence.
ACCESSION   DATGYW010000214 DATGYW010000000
VERSION     DATGYW010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2386
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13268"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..275)
                     /locus_tag="VK429_02940"
     CDS             complement(<1..275)
                     /locus_tag="VK429_02940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020887281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLN90798.1"
                     /translation="MAAYDYDLGILGGGAAGLTAAAGSAQFGAKTILVEKAKKLGGDC
                     LHFGCVPSKTLIRTAGVWSLARRAKEFGLPEVALPPVSLAAVMARVRS"
     gene            complement(341..1927)
                     /locus_tag="VK429_02945"
     CDS             complement(341..1927)
                     /locus_tag="VK429_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006003119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HLN90799.1"
                     /translation="MKTNLRSEIARRRTFGIISHPDAGKTTLTEKLLLFGGAIQMAGA
                     IKARKAARHATSDWMAIERERGISVTSSVMKFNYRDYEINLLDTPGHQDFSEDTYRVL
                     TAVDSAVMVIDSVKGVEPQTRKLMEVCRMRNTPILTFINKLDREGMNPLDILADIEET
                     LQIECAPLSWPIGKGKRFKGTYNLYRKELNLFAPGEERLTDGMLTIRDLNDPLLDERL
                     GSQALELRGDMDLLEGASNPFVPEEYLNGSQTPVFFGSAINNFGVREMLDTFVEIAPA
                     PIPRATTTRVVSPGEDAFSGFVFKIQANMDPAHRDRIAFLRICSGRFRRGMKARHHRI
                     GKDVTLANPIIFMAQDRTLVEEAWPGDIIGIHNHGTIRIGDTFSEKEPLKFVGIPNFA
                     PEHFRRVRVRSAIGAKHLKKGLAQLAEEGAVQLFHPLLGNETILGAVGVLQFDVTLAR
                     LKAEYNVDVVDESVEYATARWVGCPDREQLEAFRKANQENLALDAEGNLAYLAASEWR
                     LEFVMEKWPEIVFLKTREHD"
BASE COUNT          400 a          783 c          744 g          459 t
ORIGIN      
        1 gagcggaccc gggccatgac ggcagcgagg gagactggcg gaagcgccac ttccggaagc
       61 ccgaactcct tggcccggcg ggcaagggac cagactccgg ccgtgcggat cagcgtcttc
      121 gacgggacgc agccgaaatg caggcagtcc ccccccagtt tcttcgcctt ctcgacgagg
      181 atcgtcttcg cgccgaattg cgccgagccc gccgcagcgg tgagccccgc cgcgccccct
      241 ccgagaatcc ccaggtcgta gtcgtacgct gccatggacg tctccccccg gttcccgcct
      301 gcagatgagt cgccggtggc gcgaatacct tacgaagaat tcagtcgtgt tcgcgggtct
      361 taagaaaaac gatctccggc cacttctcca tgacgaactc cagccgccat tcgctggccg
      421 ccaggtaggc caggttcccc tcggcgtcga gcgcgagatt ctcctggttc gccttccgga
      481 aggcttccag ttgctcccgg tcggggcagc ccacccagcg ggcggtggcg tactctacgc
      541 tctcgtcgac gacgtcgacg ttgtactcgg ccttgagccg cgcgagggtc acatcgaact
      601 ggagcacccc gacggctccg aggatggtct cgttcccgag gagcggatgg aagagctgca
      661 ccgcgccttc ctcggccagc tgggccaacc ccttcttcag gtgcttcgca ccgatggccg
      721 accgcacccg cacccggcgg aagtgctccg gggcgaaatt cgggatgccg acgaacttga
      781 gcggctcctt ttcggaaaac gtgtcgccga tccggatcgt tccgtggttg tggatgccga
      841 tgatatcccc aggccacgcc tcttccacga gcgtccggtc ctgggccatg aagatgatcg
      901 ggttggcgag cgtgacgtcc ttgccgatgc ggtgatgacg cgccttcatc ccccgccgga
      961 agcggcccga gcagatgcgc aggaaggcga tccggtcgcg gtgcgcgggg tccatattcg
     1021 cctggatctt gaagacgaag ccggagaagg cgtcctcgcc gggcgacacc acgcgggtgg
     1081 tggtcgcgcg ggggatcggt gcgggtgcga tttcgacgaa ggtgtccagc atctcccgca
     1141 ccccgaaatt gttgatcgcg ctcccgaaaa agaccggcgt ctggcttccg ttgaggtact
     1201 cctccggcac gaagggattg gacgcccctt cgagcaagtc catgtccccg cgcagttcca
     1261 acgcctggct tcccagccgt tcatcgagca gcggatcgtt cagatcccgg atggtgagca
     1321 tcccgtccgt caggcgctcc tcccccggcg cgaagagatt cagttccttg cgatagaggt
     1381 tgtacgtccc cttgaagcgc ttgcccttgc cgatcggcca cgacaggggc gcgcactcga
     1441 tctgcaaggt ctcctcgatg tcggccagga tgtcgagagg attcatcccc tcgcggtcga
     1501 gcttgttgat gaaggtcagg atcggcgtgt tccgcatccg gcagacctcc atcagcttgc
     1561 gggtctgcgg ctcgaccccc ttcacgctgt cgatgaccat gaccgcgctg tccaccgcgg
     1621 tcagcacccg gtaggtgtcc tcggaaaaat cctggtggcc tggagtgtcg aggaggttga
     1681 tctcgtagtc gcggtagttg aacttcatga ccgagctggt cacggagatc ccccgctccc
     1741 gctcgatggc catccagtcg ctggtggcgt gccgggccgc cttgcgggcc ttgatcgccc
     1801 cggccatctg gatcgccccg ccgaacagaa gcagcttctc ggtcaaggtc gtctttcccg
     1861 cgtcggggtg gctgatgatg ccgaaggtgc ggcggcgggc gatttcggat cgcaggttcg
     1921 ttttcataag gtcgccattt caggcggaaa tcctccggaa gtccagtcgg gggagatgaa
     1981 cgctacgggc cgggcggcag aaacttttcc ccggacggcg ggtcctcccg cacatcgtgg
     2041 tcgaagggtt ccggggggac cataattagt attagtatga tgcaacaatt cgcgaccagg
     2101 gagcggaata cccgcatcgt ggtggtcacg ttcgagcacg gcttccttgc ccggagctac
     2161 gtcgaggaaa cttcgttgtc ctggcccctt ctcctcagca aatacccgga ataggaaagc
     2221 atgttctctc cgtttcccgt tatcacccct tccggccgat tccgggcgtg acggcccccc
     2281 ctgtcatttc agccggcaat acaaatcgtc agcagcagaa tcgtccagcg acccgcagac
     2341 ctctgcatct gctcgcgacc tcgccgggat gggtacgcac ctccat
//
LOCUS       DATGYW010000215         2600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_287883, whole genome shotgun sequence.
ACCESSION   DATGYW010000215 DATGYW010000000
VERSION     DATGYW010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2600
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287883"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            196..534
                     /locus_tag="VK429_02950"
     CDS             196..534
                     /locus_tag="VK429_02950"
                     /inference="COORDINATES: protein motif:HMM:NF019150.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1523 family protein"
                     /protein_id="HLN90800.1"
                     /translation="MPISSTGFKVKAVLVSIAVIIVLILYSYFIPDTIRTRITDAQLT
                     MIGGNFMIATEYRPLVNHDAKYRFKFDSGNIQNEAIRLKGKEVMIRKYGWRIPVFSMY
                     ENVVSIKEAR"
     gene            531..872
                     /locus_tag="VK429_02955"
     CDS             531..872
                     /locus_tag="VK429_02955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90801.1"
                     /translation="MRMDRIRFGRYGIVFYCSFGVPRKYSGIAYGPIVFILPEYRNDR
                     GLLEHELVHTRQFWNPLKWFKGKLWWEVEAFKEQAKWYSGDRSHAFARLISTSYALDI
                     SIETAEKLLKA"
     gene            978..1559
                     /locus_tag="VK429_02960"
     CDS             978..1559
                     /locus_tag="VK429_02960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010940850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HLN90802.1"
                     /translation="MDSRSRILAAATPLFARHGLNGVSVRELASAAGVNLSMISYYFG
                     GKEGLYAEILKEQFEGFRYIDDIAKRDLPPLEIFELYIRGTIRRYREKPYLLRFYVSE
                     LTNPTPCFRTIVRPAVQKILKVLRKTMEQGIARKRLRKGLNPADGVLALAGMINFCFL
                     VAPAAQGFVEGHPGRDEELVVHFMDILKRGIVA"
     gene            1591..>2600
                     /locus_tag="VK429_02965"
     CDS             1591..>2600
                     /locus_tag="VK429_02965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008939899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionyl-CoA--succinate CoA transferase"
                     /protein_id="HLN90803.1"
                     /translation="MRGLRIHNRDLREKITYATDAAELIKSGYKVGMSGFTGSGYPKL
                     VPQALAEHILREHSKGGKFRIVVMTGASTSSELDGALSMVDGIELRMPYNSDPIAREK
                     INFGKMEYFDFHLGSVAQYVRCGFFGDLDTAIIEVTGITEDGKLIPSTSVGNNQVFID
                     CAREVILEVNYYHPLELEGMHDVYEPALPPNVQPIMILKPSDRIGSPYLTCPPEKIKA
                     IVETNHPDRTTVFKEPDADSKAISRHILDFFQHEVKKGRLPKNLLPLQSGVGNVANAV
                     LYGLLDSDFEDLTVYTEVIQDGMLALIDAGKITFASSTAFSVSPAMVEKFKENINTYK
                     DK"
BASE COUNT          596 a          734 c          740 g          530 t
ORIGIN      
        1 cggcacgccg ctcccgccat gaaagcagtt gaaataagac ggaacgggtg aacccaacta
       61 catattccgg gtaccgttcc ccccgccccg tccgcgtgct cctgacgttc tgtttcagct
      121 tttcgtcgtt tccctctcca gccggaaggt tataatcctc aatacatcgc ggccctcata
      181 ccaaggaggt ttcccatgcc gatatcctcg acgggattta aggtaaaggc cgtcctcgtc
      241 agcatcgccg tgatcatcgt cctgatcctg tacagctatt tcatccccga cacgatccgc
      301 acccggataa ccgatgccca gctcacgatg atcgggggaa atttcatgat cgccaccgaa
      361 taccggccgc tcgtgaacca tgacgcaaag taccggttca aattcgattc cgggaatatc
      421 cagaacgaag ccatccggct gaagggaaag gaggtcatga tccggaaata cggatggaga
      481 atcccggtgt tttccatgta tgaaaatgtc gtctccataa aggaagcccg gtgagaatgg
      541 atagaattcg attcggcagg tacggcattg ttttctactg ttccttcggg gtgccaagaa
      601 aatattccgg aatcgcctac ggtccgatcg ttttcatatt gcccgaatac aggaatgatc
      661 ggggattgct ggaacacgaa ctggtgcata cccggcagtt ctggaatcca ctgaaatggt
      721 tcaagggaaa gttgtggtgg gaggtggaag cgttcaagga acaggcaaaa tggtattccg
      781 gcgacaggtc gcatgcattc gccaggctga tctcaacaag ctatgccttg gatatttcca
      841 tcgaaaccgc cgaaaaatta ttgaaggcat gatccccctc cccgacgtcc gtccataaat
      901 agttcttgcc tgcgcaaaac gtccgttgta tataatgtca aacgaacgtt tgattgagga
      961 ggcgattcct ggctcgtatg gattcccggt cgaggatcct tgccgcggcc acgcctctgt
     1021 tcgcgaggca tggcctgaac ggtgtgagcg ttcgcgaact ggcttccgcg gccggcgtga
     1081 acctgtccat gatctcgtac tatttcggcg ggaaggaggg cttgtacgcc gagatactca
     1141 aggagcagtt cgaagggttt cggtacatcg acgacattgc gaaaagggac cttccgccgt
     1201 tggagatatt cgagctgtac atccggggaa cgatccgccg ttaccgggag aaaccgtatc
     1261 tgcttcgatt ttacgtctcg gaactgacca atccaacgcc gtgcttccgg acgatcgtgc
     1321 gccccgccgt acagaagatc ctcaaggttc tccggaagac gatggaacag gggattgccc
     1381 ggaagcggct ccggaagggt ctgaatcccg ccgacggcgt gctcgccctg gccgggatga
     1441 tcaacttctg ctttctcgtc gctccggccg cccagggctt cgtggagggt caccccggcc
     1501 gcgacgagga gctggtggtg catttcatgg acatcttgaa aagagggatt gtggcgtaaa
     1561 acaatcatca tgggatggag ggacagcacg atgagaggtc tgcgaattca caacagggat
     1621 ctgagggaaa aaatcacgta cgcgaccgac gcggccgagc tgatcaagag cggctacaag
     1681 gtgggcatga gcggattcac cgggtcgggg tatccgaagc tggttccgca ggcgctcgcc
     1741 gagcatatcc tgcgggagca cagcaaaggg gggaagttcc gcattgtcgt catgaccggc
     1801 gcctccacca gcagcgagct cgacggggcg ctgtcgatgg tggacgggat cgagctgcgc
     1861 atgccgtaca actccgaccc gatcgcgcgg gagaagatca atttcggcaa gatggaatat
     1921 ttcgacttcc acctcgggtc ggtcgcccag tatgtccggt gcggattctt cggagacctc
     1981 gataccgcga tcatcgaggt gaccggcatc accgaggacg gcaagctcat cccctccacg
     2041 tcggtcggga acaaccaggt cttcatcgac tgcgcccggg aagtgatcct cgaggttaac
     2101 tactaccatc cgctggaact ggaagggatg cacgacgtct acgaacccgc cctgcctccg
     2161 aatgtgcagc cgatcatgat cctcaagcct tccgatcgga tcggatcccc ctacctcacg
     2221 tgcccgccgg agaagatcaa ggccatcgtc gaaacgaatc atcccgaccg gaccaccgtg
     2281 ttcaaggagc cggacgcgga cagcaaggcg atctcaaggc acattctcga tttcttccag
     2341 cacgaggtga agaaagggcg actccccaag aacctcctcc cgcttcagtc cggcgtgggc
     2401 aacgtcgcca acgcggtgct ttacggcctg ctggattcgg atttcgagga cctgaccgta
     2461 tacaccgagg tgatccagga cgggatgctg gcgctcatcg acgccgggaa gatcaccttt
     2521 gcgtcgtcga cggcattctc cgtatcgccg gccatggtcg aaaaattcaa ggagaacatc
     2581 aacacgtaca aggacaagat
//
LOCUS       DATGYW010000216         2539 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_73990, whole genome shotgun sequence.
ACCESSION   DATGYW010000216 DATGYW010000000
VERSION     DATGYW010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2539
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73990"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1699)
                     /locus_tag="VK429_02970"
     CDS             complement(<1..1699)
                     /locus_tag="VK429_02970"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HLN90804.1"
                     /translation="MFPKIRKVAVLGAGVMGSGIAAHLANAGISCLMLDIVPPAVSDE
                     EKKKGVTTKNPAFRNRFALNGVEAIRKSRPSLIYSQKDLARIAIGNFEDDFAKIAECD
                     WIVEVVVENLAIKRALYAKIEALWKPGVVVSSNTSGISIAQMMEGRGKEFRRHFLVTH
                     FFNPVRYMKLLEMVAGKDTSPEIFAGMASFGERVLGKGIVYGKDTPNFVGNRVGVFAM
                     MHAMHAMIEDGLTIEEVDKVLGPAMGRPKSAAFGTADLVGLDTLLHVSDNVYENLKDD
                     PDRERFLPPPFVKEMAKRGLLGRKTGAGFFKMEGKGETKRKYVLDYNVLEYRPAEKVT
                     FPSLDAAKGEEETGARIRKVLSGDDKAAKYAWKVLSETLLYSAKRIPEIADDVVNVDN
                     AMKWGFNWSLGPFETWDAIGLSDSVARMKAEGKAIPANVKKMLSSGVSSFYRRREGVQ
                     EFFDFASGGYLPVPVSPDIIYLPSLAERKKVVRRNAGASLYDIGDGVLCVEFHTKMNT
                     IDADIAAMLMEGVELAEKEFAGLVIANHAEHFCAGANLMLVFLEAQNKQFGNIETMVK
                     "
     gene            1796..>2539
                     /locus_tag="VK429_02975"
     CDS             1796..>2539
                     /locus_tag="VK429_02975"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen-III oxidase family protein"
                     /protein_id="HLN90805.1"
                     /translation="MRGIYVHVPFCVRKCGYCDFYSVAGGEEARDGFPALVEREMDLL
                     LRAYPGEADIPADTVYFGGGTPTVLGPDRLHRLLAAIRARFPVAEDAEITAEANPGTA
                     TGDDFARLTEGGFNRVSLGVQSFRPETLAALGRIHSVEDVRAAYRGARRAHFSSVGID
                     LIFGNPGQNEAEWQEDLDLAVTFLPDHVSAYALTPEPGTPIHGAIRGGGIALPDDDAV
                     ARMYTAARETLRTAGYCHYEISNFARQGKE"
BASE COUNT          415 a          853 c          813 g          458 t
ORIGIN      
        1 ccttgaccat cgtttcgatg ttgccgaact gcttgttctg cgcctcgagg aagacgagca
       61 tcaggttcgc cccggcgcag aagtgctccg cgtggtttgc gatgacgagc cccgcgaact
      121 ccttctcggc gagttcgacg ccctccatca gcatcgcggc gatgtcggcg tcgatcgtgt
      181 tcatcttcgt gtggaactcc acgcacagga cgccgtcgcc gatgtcgtag agcgacgccc
      241 ccgcgttccg acgcaccacc ttcttccgct ccgcaaggga gggaagataa atgatatcgg
      301 gagagacggg aaccgggaga tacccgcccg aggcgaaatc gaaaaactcc tgcacccctt
      361 cccggcggcg atagaaggag gacacccccg aggagagcat cttcttgacg ttcgccggga
      421 tcgccttccc ctcggccttc atcctggcca ccgagtcgga caacccgatc gcgtcccacg
      481 tctcgaaggg gccgaggctc cagttgaatc cccacttcat cgcgttgtcg acgttgacaa
      541 cgtcgtcggc gatctccggg atccgtttcg cggagtagag cagcgtctcg gagagcacct
      601 tccaggcgta cttcgccgcc ttgtcgtccc cggagagcac tttccggatc cgcgcccccg
      661 tctcctcctc gcctttcgcc gcgtcgaggg acgggaaggt gaccttctcc gccgggcggt
      721 actccagcac gttgtagtcg aggacgtatt tgcgcttcgt ctcccccttc ccctccatct
      781 tgaagaagcc ggcgccggtc ttgcggccca gcaggccgcg cttcgccatc tccttcacga
      841 aggggggcgg caggaaccgc tcgcggtcgg gatcgtcctt gagattttcg tacacgttgt
      901 cggagacgtg gaggagcgtg tcgaggccca cgagatcggc ggtgccgaag gcggccgatt
      961 tcgggcgccc catcgccggc ccgaggacct tgtccacttc ctcgatggtc agcccgtcct
     1021 cgatcatcgc gtgcatcgcg tgcatcatcg cgaagacgcc gacacggttc cctacgaaat
     1081 tcggggtatc cttcccgtag acgatccctt tcccgaggac ccgttcgccg aaggaggcca
     1141 tccccgcgaa gatctcgggg gaggtgtctt tcccggcgac catctcgagc agcttcatgt
     1201 accggacggg gttgaaaaag tgggtgacga ggaagtggcg gcggaactcc ttcccgcgcc
     1261 cttccatcat ctgcgcgatc gagatccccg aggtgttcga ggagacgacg acccccggtt
     1321 tccagagcgc ctcgatcttc gcgtagagcg cccgcttgat cgccaggttc tcgaccacca
     1381 cctcgacgat ccagtcgcac tccgcgatct tcgcgaagtc gtcctcgaaa ttgccgatcg
     1441 cgatccgcgc caggtccttc tgcgaataga tcagggaagg gcggctcttc cggattgcct
     1501 ccaccccgtt cagggcgaag cggttgcgga aggcgggatt cttcgtcgtc acccccttct
     1561 tcttctcctc gtcggagacc gccggcggga cgatgtcgag catcaggcag gagatcccgg
     1621 cgttggccag gtgcgccgcg atcccggaac ccatcacccc ggccccgagc accgccacct
     1681 tgcggatttt cggaaacatc ggttcctacc tcctgtcggg tcggtgtcgg acggaacgcg
     1741 agactgaatg atgattcact tcagggggcg tgtcaaggtg tgggagaatg ggcccatgcg
     1801 ggggatctac gttcacgttc cgttctgcgt ccgcaagtgc gggtattgcg acttctactc
     1861 ggtcgccggc ggggaggagg cgcgcgacgg gtttcccgcg ctcgtggagc gggagatgga
     1921 cctcctcctg cgcgcgtacc ccggggaggc ggacatcccg gcggacaccg tgtacttcgg
     1981 cggggggaca ccgacggtcc tcgggccgga ccggctccac cggctcctcg ccgcgatccg
     2041 ggcgcgcttt cccgtggcgg aagacgcgga gatcacggcg gaggcgaacc cggggacggc
     2101 gaccggagac gatttcgccc gactgacgga gggcggtttc aaccgcgtga gcctcggtgt
     2161 ccagtcgttc cggccggaaa ccctcgccgc cctcggacgg atccactccg tggaggacgt
     2221 ccgtgcggcg taccgggggg cacgcagggc gcacttctcc tccgtgggga tcgacctcat
     2281 cttcggaaac cccggccaga acgaggcgga gtggcaagag gacctcgacc tcgccgtgac
     2341 gttcctgccc gaccacgtgt cggcctacgc gttgacgccg gagcccggga cgccgatcca
     2401 cggggcgatc cgcggcggcg ggatcgccct gcccgacgac gacgccgtcg cccggatgta
     2461 cacggcggcg cgggaaacct tgagaaccgc ggggtactgc cattacgaga tctccaactt
     2521 cgcccggcag gggaaggag
//
LOCUS       DATGYW010000217         1789 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_13410, whole genome shotgun sequence.
ACCESSION   DATGYW010000217 DATGYW010000000
VERSION     DATGYW010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1789
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13410"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..539)
                     /locus_tag="VK429_02980"
     CDS             complement(<1..539)
                     /locus_tag="VK429_02980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN90806.1"
                     /translation="MTVPRSEQEGGPKPPETPLLSVNNIEVIYDHVILVLKGVSLEVP
                     RGGIVALLGANGAGKTTTLKAISNLLASERGAVTKGTIEFEGRRIDNRNPRELVRHGV
                     IQVMEGRHCFGHLTVEENLLTTAFARHARRAEFLRDLEKIYEYFPQLKARRKSIAGYT
                     SGGEQQMTVIGRALMARPK"
     gene            complement(520..>1789)
                     /locus_tag="VK429_02985"
     CDS             complement(520..>1789)
                     /locus_tag="VK429_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014725915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN90807.1"
                     /translation="TVPALAQNEQFIPMVDYRVGPYAAGGTGTFGGFIDYLDMLNKRD
                     GGINGVKLTWEECETEYKNDRGVECYERLKKKGPTGAAMFNFVSTGITYACIERATAD
                     KIPVVSIGYGRADASDGRVFPYVFPLVTNYWSQNTAKIKFIGMREGGMDKLKGKKIVN
                     LYHGSAFGKETIRILDLQAKKYGFTVTHIEVAHPGNEQESQWLQIRQLKPDWVILRGW
                     GVMNPVALKTAAKVGYPRDHIVGFWWSGAEEDVIPAGDAAKNYISAAFHPSGTDFPVL
                     QDVKKYVYSGGHKGNLEDFSRFGSIYYNRGIIHGILNTEAIRTAQAKFGKKPLTGEQV
                     RWGLENLNIDEKRLKELGAVGLLQPIKLSCMDHEGGGAVKFQQWDGTKWKVITDWIKS
                     DQSIVRPLVEESAAAYAKEKGITPRDCSKE"
BASE COUNT          280 a          587 c          549 g          373 t
ORIGIN      
        1 atcttcggcc gagccatgag ggcccggccg atgaccgtca tctgctgctc gcctcccgag
       61 gtgtagccgg cgatcgactt gcgccgggcc ttcagctgcg ggaaatactc gtagatcttc
      121 tcgaggtccc gcaggaactc ggcgcggcgg gcgtgccgcg cgaatgcggt tgtcaggagg
      181 ttctcctcga ccgtgagatg cccgaagcag tgccgcccct ccatgacctg gatcactccg
      241 tggcggacga gctcccgggg attgcggttg tcgatccgcc ttccctcgaa ctcgattgtg
      301 cccttggtca cggccccgcg ctcggacgcg aggagattgg agatcgcctt cagtgtcgtc
      361 gtcttgcccg cgccgttggc gccgagaagc gcgacgatgc ctccgcgtgg cacctcaagg
      421 gagaccccct tcagcacgag gatcacgtgg tcgtagatga cctcgatgtt gttgaccgag
      481 aggaggggcg tctccggggg cttcggcccc ccttcctgtt cactccttgg aacagtcacg
      541 cggcgtaatc cccttctcct tcgcatacgc ggccgccgac tcctcgacca gcgggcggac
      601 gatcgactgg tccgacttga tccagtccgt gatcaccttc cattttgtcc cgtcccattg
      661 ctggaacttg accgcgccgc ccccctcgtg atccatgcag gagagcttga tcggctgcag
      721 gagtccaacg gcgcccagct ctttcaggcg cttctcgtcg atgttcaggt tctccaggcc
      781 ccagcgcacc tgctcgccgg tcagcggctt cttgccgaac ttcgcctgcg ccgtgcggat
      841 cgcctcggtg ttcaggatgc cgtgaatgat gccgcggttg taatagatcg agccgaaacg
      901 cgagaagtcc tccaggttcc ccttgtgccc gccggagtag acgtacttct tgacatcctg
      961 cagaaccggg aagtccgtac ccgaaggatg aaaggccgcc gagatgtagt tcttggccgc
     1021 gtcgccggcg ggaatcacgt cctcctccgc tccgctccac cagaagccga cgatgtgatc
     1081 acgcggataa ccgaccttgg cggccgtctt caaggcaacc gggttcatca cgccccagcc
     1141 gcgcaggatc acccagtcgg gcttcaattg ccggatctgg agccactgcg attcctgctc
     1201 gttgcccggg tgggcgacct cgatgtgggt gacggtgaag ccgtacttct tggcttgcag
     1261 atcgaggatc cgaatcgtct ccttgccgaa ggcggagccg tggtagaggt tgacgatctt
     1321 cttccccttc agcttgtcca tcccgccttc cctcatgccg atgaacttga tcttggcggt
     1381 gttctggctc cagtagttcg tcacgagggg aaagacgtac gggaagaccc gcccgtccga
     1441 ggcgtcggcg cggccgtagc cgatcgagac gacggggatc ttgtcggcgg tcgcgcgctc
     1501 gatgcaagcg tacgtgatgc cggtcgagac gaagttgaac atcgcggcgc cggtcggccc
     1561 cttcttcttg agcctctcgt aacattcgac accgcggtcg ttcttgtact ccgtctcgca
     1621 ttcctcccag gtcagcttga cgccgttgat gccgccgtcc cgtttgttca gcatgtcgag
     1681 gtagtcgatg aacccgccga aggtgccggt gccccccgcc gcgtagggtc cgacccggta
     1741 gtccaccatc ggaatgaact gctcgttctg cgcgagagcg gggacggtg
//
LOCUS       DATGYW010000218         3754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_395082, whole genome shotgun sequence.
ACCESSION   DATGYW010000218 DATGYW010000000
VERSION     DATGYW010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3754
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395082"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1518)
                     /locus_tag="VK429_02990"
     CDS             complement(<1..1518)
                     /locus_tag="VK429_02990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015436533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase C-terminal
                     domain-containing protein"
                     /protein_id="HLN90808.1"
                     /translation="MIREKVARLAARMHDGPQYPSQGAVLFVDLERREHFSSYLPVGV
                     LRSFLSGRGANMFLLHNLLLDGREPLDPQIPMIFGSGVFTGTLPTAARGNLTSVAPDS
                     DAILDSNCGDYFPAFMKLGGTDHLVLYGQAAGWTLLELSGEAVRFHDATPYLGMDNTD
                     LTRAVERDFSCAERKDMAMARITRAGENLVLCSGIMGGPKAIYARCGAGAKMGSLRLK
                     AVMILGRGEPPALSPAYKENNRELARKILATSVVKYALKKVGTPFLYKPSRILGAMGA
                     KNNQETSWYDTLDADNFDVYRPGMDGCFQCPIRCRPLNDLTPEGKGGWGADAMKGVTG
                     NAGYDERQAGIGHLREKSYKGIRGDGAYDRHDKGDGPDYVTLGKMGPMIGIREPEQVL
                     RLNNILNDLGLDSASTGSAIAWAMELYQRGILTAVETGGLDLTWGKYDVIETLLYMTS
                     RREGFGDVIADSARAVERGRYPAEALKYRMAVKGLFQSDPHDARIIKGFALGLAVS"
     gene            complement(1515..2456)
                     /locus_tag="VK429_02995"
     CDS             complement(1515..2456)
                     /locus_tag="VK429_02995"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020678330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HLN90809.1"
                     /translation="MGTGGYQPKRFAVVGAGPVGAIVAAFLAKGGYDVTLCDVVPSLL
                     RPALDPGIRIEGTDTLLAKVARTTTRVDDLTGDPPDVVIVAVKATALPLIASTLEGFV
                     AEGRYVVSWQNGIDTERILAKHLGARSVLRAVVNFGCVPLGPAHVRIAFHHRPHHIQE
                     LDPRSRDAAVGICEVFTACGLDTSHTFQIQDMVWRKAVLNACMNPICAVTGKTMAEVI
                     NDPILFHLVDALIKEGTSVARANEFRLGTDYYPYCIDYIRNAGHHKPSMLQDIEAGRR
                     TEVDYINGKIVEYGAQAGVPTPYNTMIRGLVKALEPK"
     gene            complement(2460..2900)
                     /locus_tag="VK429_03000"
     CDS             complement(2460..2900)
                     /locus_tag="VK429_03000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015838115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid-binding protein"
                     /protein_id="HLN90810.1"
                     /translation="MKLKQLSIFLENAPGRLYEATHALGEAGINLRSLCISDSSDFGV
                     LRILVSDVGKARRVIMEKQLPARIDDVVAVEIDDTPGSLARILYPFKEIRVNVEYMYA
                     LAGASSGKAVMVFRFNDNDKAIEILRENKVRILDAEAFGMIESK"
     gene            complement(2918..>3754)
                     /locus_tag="VK429_03005"
     CDS             complement(2918..>3754)
                     /locus_tag="VK429_03005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020678326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase"
                     /protein_id="HLN90811.1"
                     /translation="FGSTVVTSTPSFLMRLHEVGVQMGVDFKKLKLRIGLLGAEPWSE
                     SMRQSIDERFGIKACDMYGLSEMIGPGVSFECHEMRNGLHVNEDYFYPEIIHPDTCEV
                     LPYGQEGELVITNFANEGQPLMRYRTRDISRLTVDPCACGRTLVKMQRVTGRTDDMLI
                     IRGVNFFPSQIESIIMKRWGVSPHYMVVVDRPGAMDEVEVKIEVNDEFMRKAAADVLS
                     GSENDILSDVATAKQKKSNLKRDIKDIIGITVQVTLVAPGTIPRSEGKAKRVDDRRPK
                     AG"
BASE COUNT          576 a         1247 c         1238 g          693 t
ORIGIN      
        1 cgagacggca aggccgaggg cgaacccctt gatgatgcgc gcgtcgtgcg gatcggactg
       61 gaacagcccc ttgacggcca tccggtactt cagcgcctcc gccgggtacc tcccccgctc
      121 gaccgcgcgg gccgagtcgg cgatcacgtc gccgaaccct tccctccggg acgtcatgta
      181 caggagcgtt tcgatcacat catacttccc ccaggtcagg tcgagcccac cggtctccac
      241 cgccgtgagg atgccacgct ggtagagctc catcgcccag gcgatcgcgg accccgtgct
      301 ggcgctgtcc aaaccgagat cgttgaggat gttgttcagt cgcagtacct gttccggctc
      361 ccggatcccg atcatcgggc ccatcttccc cagggtgacg taatcggggc cgtccccctt
      421 gtcgtgcctg tcgtatgcgc catcgccccg gatccccttg tagctcttct cccgcaggtg
      481 cccgatcccg gcctgccgct cgtcgtaccc ggcgttcccg gtcaccccct tcattgcgtc
      541 ggcgccccat ccccccttcc cttccggggt gaggtcgttc aacgggcggc accggatcgg
      601 gcactggaag catccgtcca tgcccggccg gtacacgtcg aagttgtcgg catcgagggt
      661 gtcgtaccag ctcgtctcct ggttgttttt cgcccccatc gcgccgagga tgcggctggg
      721 cttgtagagg aagggggtgc ccaccttttt cagggcgtac ttgacgacgc tggtcgcgag
      781 gattttccgg gccagctccc ggttgttctc cttgtaggct ggagaaagcg cgggcggctc
      841 tccccggccg aggatcatca cggctttcag ccggagggag cccatcttcg cgccggcgcc
      901 gcaccgggcg tagatcgcct tcggcccccc catgatcccg gagcacagga ccaggttctc
      961 gccggcgcgc gtgatgcgag ccatcgccat gtccttccgc tcggcgcagg agaaatccct
     1021 ttcgacggcc cgggtgaggt cggtgttgtc catcccgagg tagggagtgg cgtcgtgaaa
     1081 gcggaccgcc tcgccggaga gctcgaggag ggtccagccg gcggcctggc cgtagaggac
     1141 gaggtggtcg gtgccgccca gtttcatgaa ggccgggaag taatcgccgc agttgctgtc
     1201 gaggatcgcg tcgctgtcgg gggcgacgct ggtgaggttg ccgcgcgcag cggtgggaag
     1261 cgtccccgtg aagacgccgc tgccgaagat catcggtatc tgcgggtcga gcggttccct
     1321 gccgtcgagg agaaggttat ggaggaggaa catgttcgcg ccgcggccgg agaggaacga
     1381 ccgcagcacc ccgacgggaa ggtagctgga gaaatgctcc cgccgctcga ggtcgacgaa
     1441 gagcacggcg ccctgcgacg ggtactgcgg cccgtcgtgc atccgcgcgg cgagacgcgc
     1501 aaccttctcc cggatcattt cggctcgagc gccttcacga gaccgcggat catcgtgttg
     1561 tacggggtgg ggacgccggc ctgggccccg tactcgacga tcttgccgtt gatgtagtcg
     1621 acctcggtcc gccggcccgc ctcgatgtcc tggagcatgg acggcttgtg gtggccggcg
     1681 ttccggatgt agtcgatgca gtacggatag tagtccgtcc cgagccggaa ctcgttcgcc
     1741 ctggcgacgg aggtcccctc cttgatgagg gcgtcgacca ggtggaagag gatcggatcg
     1801 ttgatcacct cggccatcgt ctttccggtg acggcgcaga tcgggttcat gcaggcgttc
     1861 aggaccgcct tgcgccagac catgtcctgg atctggaagg tgtgcgaggt gtcgagcccg
     1921 cacgcggtga acacttcgca gatcccgacg gcggcatccc tcgatcgggg gtcgagctcc
     1981 tggatgtggt gggggcgatg gtggaaggcg atccggacat gggccggccc cagcgggacg
     2041 cagccgaaat tgacgacggc ccgcagtacg gaacgggcgc ccaggtgttt cgcgaggatc
     2101 cgctcggtgt cgatgccgtt ctgccagctg acgacgtacc gcccctcggc gacgaacccc
     2161 tcgagggtgg aggcgatcag cggaagggcg gtggccttga ccgccacgat cacgacgtcg
     2221 gggggatccc cggtcagatc gtcgacgcgg gtggtcgtcc tcgcgacctt ggccaggagg
     2281 gtgtcggtcc cctcgatgcg gatgccggga tccagggccg gtctgagcag cgacggcacc
     2341 acgtcgcaaa gggtgacgtc gtaccccccc ttcgcgagga aggcggcgac gatcgcgccg
     2401 accgggccgg cgccgacgac cgcgaaccgc ttcggctggt agcctcccgt tcccatcggc
     2461 tacttgctct cgatcattcc gaacgcctcg gcatcgagga tccggacctt gttctctcga
     2521 aggatctcga tcgccttgtc gttgtcgttg aaccggaaga ccatcaccgc cttcccggac
     2581 gaggcgcccg ccagggcgta catgtattcg acgttcaccc tgatttcctt gaacgggtaa
     2641 aggatccggg ccagggaacc gggggtgtcg tcgatctcca ccgcgacgac gtcgtcgatg
     2701 cgggccggaa gctgcttctc catgatcacc cgccgggcct tgccgacgtc ggacacgagg
     2761 atccgcagga cgccgaagtc ggagctgtcg ctgatgcaaa gggaccgcag gttgatcccc
     2821 gcctcgccca gcgcatgggt cgcctcgtac aggcgccccg gcgcgttctc caggaagatc
     2881 gacagctgct tcagcttcat cgcaacctcc tccgccgtca cccggctttc gggcgacggt
     2941 cgtcgacgcg cttcgccttc ccctcgctgc gcgggatcgt cccgggcgcg acgagcgtca
     3001 cctgcacggt gatgccgatg atatccttga tgtcgcgctt caggttcgac ttcttctgct
     3061 tcgcggtcgc cacgtcgctc aggatgtcgt tctcgctccc cgagaggacg tcggccgcgg
     3121 ccttcctcat gaactcgtcg ttcacctcga tcttcacctc gacctcgtcc atcgctcccg
     3181 gacggtcgac gacgaccatg tagtgcggcg acacgcccca ccgcttcatg atgatcgact
     3241 cgatctggga cgggaagaag ttcactccgc ggatgatcag catgtcgtcg gtccggcccg
     3301 tcacccgctg catcttgacg agggtccgcc cgcaggcgca cgggtcgacg gtcagccgcg
     3361 agatgtcccg ggtgcggtac cgcatcagcg gctggccctc gttggcgaag ttcgtgatga
     3421 cgagttcccc ttcctggccg tatggaagca cctcgcaggt atcggggtgg atgatctcgg
     3481 ggtagaagta gtcctcgttg acgtggagcc cgttgcgcat ctcgtggcac tcgaacgaga
     3541 cccccgggcc gatcatctcg gagaggccgt acatatcgca cgccttgatc ccgaaccgct
     3601 cgtcgatcga ctgccgcatc gactcgctcc acggctcggc gccgagcagg ccgatccgga
     3661 gcttgagctt cttgaagtcg acccccatct gcaccccgac ctcgtggagc cgcatgagga
     3721 acgagggtgt ggaggtgacg accgtgctgc cgaa
//
LOCUS       DATGYW010000219         1631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_169795, whole genome shotgun sequence.
ACCESSION   DATGYW010000219 DATGYW010000000
VERSION     DATGYW010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169795"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..532)
                     /locus_tag="VK429_03010"
     CDS             complement(<1..532)
                     /locus_tag="VK429_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019414095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN90812.1"
                     /translation="MSSLLSLRNIGKTFGGLSALSDISFDVQPGEIVGVIGPNGAGKT
                     TLFNVVTAVFPPSAGDVVFDGKRIRGLPPHAITKRGITRTFQNIRLFSTMTVEENVMV
                     GRHCRTGAGIWRGVLRTRGEQREEREIRGKTRELLDLVGLSGDDPERAAGSLPYGHQR
                     RLEIARALAAEPRLLLL"
     gene            complement(529..1476)
                     /locus_tag="VK429_03015"
     CDS             complement(529..1476)
                     /locus_tag="VK429_03015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018707082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN90813.1"
                     /translation="MPLEGLNPYHLQVGSFVLINAILGVSIYVTLSTGQLSLGNAGFM
                     SIGAYTAALLSTQHQVPIPVGILAGSLLAGVAGILVGIPSLRLSGVYLAIATLGFGEV
                     LRAVLINWESLTGGAVGIASIPQMGRVILVWARDRGFSPESVGLQANQFISLTVFLIL
                     LLCAILTVAFFLRLSRSRVGRAYAAIRLDESASEAAGIPITYYKVLAFSQGALLSGFA
                     GALFAHSTSFVSPGDFTYHRAVEILVFAVFGGSEHIFGPVFGAAFLTIVPEALRSISD
                     YRYILYGLLLVLMMVFRPQGVIDPALLRRIRRTGKGRPA"
     gene            complement(1480..>1631)
                     /locus_tag="VK429_03020"
     CDS             complement(1480..>1631)
                     /locus_tag="VK429_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017754486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN90814.1"
                     /translation="GLILGLSETFVVAYGSSGYRDAIAFIAIIVILLIRPQGLFGQAP
                     AEARR"
BASE COUNT          317 a          524 c          552 g          238 t
ORIGIN      
        1 cgagcaggag gaggcgtggc tccgccgcca gcgcccgcgc gatctcgagt ctgcgctggt
       61 ggccgtaggg gaggctcccg gcggccctct ccgggtcgtc cccggaaaga ccgacgaggt
      121 cgagcagttc ccgcgttttc cctcggatct cccgctcctc gcgctgttcc ccccgggtgc
      181 gcagcacgcc gcgccagatg ccggctcccg tgcggcaatg cctcccgacc atgacgtttt
      241 cctcgacggt catggtggag aagagacgga tgttctggaa cgtccttgtg atgccccgtt
      301 tcgtgatggc gtgcggaggg agcccgcgga tccgcttccc gtcgaaaacg acatcccccg
      361 cgctcggcgg gaagacggca gtgaccacat tgaacagggt cgtcttcccg gcgccgttgg
      421 ggccgatgac tccgacgatc tcccccggtt gaacgtcgaa ggagatatcg gaaagagccg
      481 aaagcccacc gaacgttttt ccgatgttcc gaagggaaag gaggctgctc acgcgggcct
      541 ccccttgccg gtgcgacgga tccgtcgcag cagcgcgggg tcgatcaccc cctgcggtcg
      601 gaagaccatc atcaacacca gaaggagccc gtagaggatg taccggtagt cgctgatcga
      661 gcgaagcgct tccgggacga tggtgaggaa cgcggcgccg aagacggggc cgaaaatgtg
      721 ctcgcttccg ccgaagaccg cgaagacgag gatctcgacg gcccggtggt aggtgaagtc
      781 cccagggcta acgaacgacg tcgagtgggc gaacagcgct ccggcgaatc cggagagcag
      841 cgctccctgg gagaaagcca gcaccttgta atacgtgatg gggatccccg ccgcctccga
      901 ggcgctttcg tcgagccgaa tcgcggcgta tgcgcggccg accctggaac gggagaggcg
      961 caggaagaag gcgaccgtca ggatcgcgca gaggagaagg atcaggaaca ccgtcaggct
     1021 gatgaactgg ttcgcctgca gcccgaccga ttcgggggag aaccccctgt ccctcgccca
     1081 gacgaggatc acgcggccca tctgcgggat cgacgcgatc cccaccgcgc cgccggtcaa
     1141 cgactcccag ttgatgagga cggcccggag aacctcgccg aaaccgagcg tcgcgatggc
     1201 gagatagacc ccggaaagcc gaagggacgg tatgccgacg aggatccccg caaccccggc
     1261 gaggagactc ccggcaagga tccccacggg gatcgggacc tggtgctggg tggagagaag
     1321 cgcggcggtg tacgccccga tgctcatgaa ccctgcgttt cccagcgaga gttgcccggt
     1381 agaaagggtg acgtagatgc tcacgccgag gatggcgttg atcagcacga acgaccccac
     1441 ctgcaggtgg tacgggttca gtccctccag aggcatcccc taccgccttg cttcggcggg
     1501 cgcctgcccg aacagcccct gcggcctgat gaggaggatg acgatgatcg cgatgaaggc
     1561 gatcgcgtcc cggtacccgg aggagccgta ggcgaccacg aacgtttcgg aaagcccgag
     1621 gatcaacccc c
//
LOCUS       DATGYW010000220         2316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_13548, whole genome shotgun sequence.
ACCESSION   DATGYW010000220 DATGYW010000000
VERSION     DATGYW010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13548"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VK429_03025"
     CDS             <1..272
                     /locus_tag="VK429_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014780160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydrogenase"
                     /protein_id="HLN90815.1"
                     /translation="AREPKKYFPKVYGDTDGGGTQVLYLSAAGIPFGKLGLPDLGTES
                     GAALSEHLTHAVYQGFIAPIALYAVLGFAVWRSWRRQGLGKGGEG"
     gene            269..1486
                     /gene="hybB"
                     /locus_tag="VK429_03030"
     CDS             269..1486
                     /gene="hybB"
                     /locus_tag="VK429_03030"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: protein motif:HMM:NF008133.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase cytochrome b subunit"
                     /protein_id="HLN90816.1"
                     /translation="MSHKHKHQAAAVGGPILTRPFIACLAVFALSIVVLAWRFVVGLG
                     PTTGMNDGFPWGIWIAFDVVTGTALACGGYSVAILCYALNEGKYHALIRPAVLTSALG
                     YSLAGASVIVDLGRYWNVWKIPLIWNWNRNSVLLEVAICIMTYVVVLWIELSPAFVEV
                     WEKQEKYPLLCRAARRVHGWLNRYLVAILALGILLPTMHQSSLGSLMLIMVSKLHKLW
                     HTPLLPFLFLATAVLMGYAAVIFESALADEVFDRPRETKILAPLSGIMVGVLFFFLGV
                     RFVDLALRGRLALVARLDFYSWMFLLEMALFLGAAILLLSRKRRYNPGVELISAILIM
                     LGGSLYRFDTFLVGFQPGPGWSYFPTIPEMAVTIGFVAFEVLAYLFIVKSFPILHTGV
                     SPHGLEAAPKPSR"
     gene            1498..>2316
                     /locus_tag="VK429_03035"
     CDS             1498..>2316
                     /locus_tag="VK429_03035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011984843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HLN90817.1"
                     /translation="MSQRITIDPVTRIEGHLRIDVEVDGGVVKDAWSSGTMWRGIEVI
                     LKGRDPREAWIYTQRICGVCTTVHAIASVRAVENALGLEIPLNAQYIRNLLITAHALG
                     DHIVHFYQLSALDWVDVTSALKADPAKAASIAESLSPWPGNSRMQMETVKNRVSEFVK
                     GGQLGIFANGYWGHPAMKLPPEINLIAVSHYLQALDAQRKANQAVAILGGKTPHIQNL
                     AVGGVANAINLDDPATLNMEKIYMVKDLLTEVTAFVRQVYLPDVCVIGAKYAEWL"
BASE COUNT          372 a          766 c          744 g          434 t
ORIGIN      
        1 tcgccaggga gccgaagaag tatttcccga aggtgtatgg cgataccgac gggggaggga
       61 cccaggtcct ctacctgtcc gccgccggga tcccgttcgg gaaactcggc ctgccggacc
      121 ttggtaccga atccggtgcc gcactgtccg aacacctgac gcacgccgtg taccagggat
      181 tcatcgcgcc gatcgccctc tacgctgtcc tcggattcgc tgtctggcgg tcctggcgcc
      241 gccagggact gggaaagggg ggggagggat gagccacaag cacaagcacc aagcggcggc
      301 cgtcggcgga cccatcctca cccggccctt catcgcgtgc cttgcggtct tcgccctgtc
      361 gatcgtcgtg ctggcatggc gcttcgtggt cggcctcgga cccacgaccg ggatgaacga
      421 cgggttcccg tgggggatct ggatcgcctt cgacgtggtg accggaaccg cgctggcgtg
      481 cggggggtac tcggtggcga tcctgtgtta cgccctcaac gaggggaagt accacgcgct
      541 catccggccc gccgtcctga cgagcgcgtt gggatattcg ctggccggcg cttccgtcat
      601 cgtcgacctg gggcggtact ggaacgtctg gaagatcccc ctgatctgga actggaaccg
      661 gaactccgtc ctcctcgaag tcgcgatctg catcatgacc tacgtggtcg ttctctggat
      721 cgagctgtcc ccggcgttcg tcgaggtctg ggagaagcag gagaagtacc ctctgctctg
      781 ccgggcggcc cgccgcgtcc acggatggct caaccggtac ctggtcgcga tcctcgccct
      841 cgggatcctc ctccccacga tgcaccagtc gtctctcggc tccctcatgc tgatcatggt
      901 aagcaagctc cacaagctct ggcacacgcc gctcctcccc ttcctcttcc tggcgacggc
      961 cgtcctcatg ggctatgcgg cggtcatctt cgagtccgcg ctggcggatg aggtgttcga
     1021 ccggccgcgg gagacgaaga tcctggcgcc cttgtccggg atcatggtgg gcgtcctgtt
     1081 cttcttcctc ggagtgcggt tcgtcgacct cgccctgcgg ggccggttgg ccctcgtggc
     1141 caggctggac ttctacagct ggatgttcct cctggagatg gcgctcttcc tcggggcggc
     1201 catcctgctt ctttccagga agcgaaggta caacccgggg gtcgagctga tctccgcgat
     1261 cctcataatg ctcggaggat cgctgtaccg gttcgacacg ttcctggtcg gcttccaacc
     1321 cggtcccggc tggtcctact tcccgacgat cccggagatg gctgtgacca tcggcttcgt
     1381 cgccttcgag gtcctggcgt acctcttcat cgtcaagtca ttcccgattc tccacaccgg
     1441 cgtttctccc catggcctcg aggcggcgcc gaaaccttca agataggggg actccccatg
     1501 agccagcgga tcacgatcga cccggttacg cggattgaag ggcacctccg catcgacgtc
     1561 gaggtcgacg gcggcgtggt gaaggacgcc tggtcgtccg ggacgatgtg gcgggggatc
     1621 gaggtcatcc tgaaggggcg ggatccccgc gaggcgtgga tctacacgca gcggatctgc
     1681 ggggtctgca cgaccgtcca cgccatcgcg tcggtccggg cggtggagaa cgccctcggg
     1741 ctggagattc cgctgaacgc ccagtacatc cggaacctcc tgatcacggc gcacgccctg
     1801 ggcgaccaca tcgttcattt ctaccagctc tccgccctcg actgggtcga cgtcacgtcc
     1861 gccctaaagg ccgacccggc gaaggccgcg agcatcgcgg aaagcctctc gccgtggccc
     1921 gggaacagcc ggatgcagat ggagacggtg aaaaacaggg tttcggagtt cgtcaagggc
     1981 ggccagctgg ggattttcgc caatggctac tggggccacc ccgcgatgaa gctcccgccg
     2041 gagatcaacc tgatcgccgt ttcccactac ctccaggcgc tcgacgccca gcggaaggcg
     2101 aaccaggcgg tcgcgatcct cggcggcaag acgccccaca tccagaacct ggcggtgggg
     2161 ggcgtggcga acgcgatcaa tctggacgat ccggcgaccc tgaacatgga gaagatctac
     2221 atggtgaagg acctcctcac ggaggtcacg gcgttcgtcc ggcaggtcta cctgccggac
     2281 gtgtgcgtca tcggcgcgaa atacgccgaa tggctc
//
LOCUS       DATGYW010000221         2821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_234687, whole genome shotgun sequence.
ACCESSION   DATGYW010000221 DATGYW010000000
VERSION     DATGYW010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2821
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234687"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..733
                     /locus_tag="VK429_03040"
     CDS             <1..733
                     /locus_tag="VK429_03040"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PIG-L deacetylase family protein"
                     /protein_id="HLN90818.1"
                     /translation="LAHPDDETFGTGGTIARYAGSGAEVHLATATRGEAGMVGDPPVT
                     DREHLGEVRAGELMAAAAILGIARVHFLGFLDGQLATVPREQLVERAVERIRRVRPHV
                     LVGFGPDGVSQHADHKVMCEVALSAFDRSADPTWYPGDGAPWAPLKLYQFEIAQEIFA
                     GWDAPLSGVPRAKLTAFIDTSEQVEKKIRAFDCHKTQAKDTRRLLERPGYREFARQET
                     YVLARTRLPGLPLPEDDLLSGIPDD"
     gene            757..1797
                     /locus_tag="VK429_03045"
     CDS             757..1797
                     /locus_tag="VK429_03045"
                     /inference="COORDINATES: protein motif:HMM:NF017847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF933 domain-containing protein"
                     /protein_id="HLN90819.1"
                     /translation="MDVGIFGNTGSGKSTLFRSLSGTAQASAQGKSAGVCAIKVPDER
                     VDRMAEIFHPKKVTYISMAFHDIDAGETDLLSPQALTELRSIEVLALVVRAFADDYHP
                     APPGGLDPAAEFRELSSAIVLSDYLVAQKRIERMTKEAKRDAEWTALHKAIAAFERDV
                     PLRNIDLSAEEERVLSGFRFVSRLPTLMILNVGEGEATSETYPDVAKEAERAKVPLVR
                     LCAKVEEEIAQLSPAEQADFLKEMGIARSARDQLVRGAFEATRYISFLTVGEDEVRAW
                     NVREGSTAPTAAGKIHSDLEKGFIRAEVISSDDFLRCGSMAKAKTEGKLRLEGKEYVV
                     KDGDIVHVRFNV"
     gene            1877..>2821
                     /locus_tag="VK429_03050"
     CDS             1877..>2821
                     /locus_tag="VK429_03050"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HLN90820.1"
                     /translation="MGSATDTPDAREGAPKVRVLVVDDEEFLRSIVRERLEIAGYSVE
                     EASNGKEALVMLEGSGPYSVLLTDIRMPVMDGITLLGEWGKKSPGTAGIVMSANAELD
                     TAVHALKMGACDYITKPFNFDVLLITIENALRKKDLERQLDDYRMNLEVKVKEQTDVI
                     NSNYVRFIDSLIRTLEAKDSYTRGHSQRVTRWSVAIAEELGMAGQELEDLYRASVLHD
                     LGKIGVKEAVLNKPGRLTEEEFAEIVRHPEKAVEILEPIDFYKPIFPAIRHHHERFDG
                     KGYPSRLAGKNIPLASRIMTIADTFDAMTSTRAYRKALP"
BASE COUNT          534 a          891 c          958 g          438 t
ORIGIN      
        1 gttggcccac cccgacgacg agacgttcgg caccggcggg acgatcgcgc ggtatgcagg
       61 ttcgggggcg gaagtgcacc tggcgacggc gacccggggg gaggccggga tggtgggcga
      121 tccccctgtg acggaccggg agcacctcgg ggaggtgcgc gccggggagc tgatggcggc
      181 ggcggcgatc ctcgggatcg caagggtaca tttcctcggg ttcctcgacg ggcagctggc
      241 gaccgtgccc cgggagcagc tggtggagcg cgccgtcgag cggatccggc gggtgcggcc
      301 ccacgtcctc gtcgggttcg gccccgacgg ggtatcgcaa cacgccgacc acaaggtcat
      361 gtgcgaggtg gcgctgtccg ccttcgaccg ctccgccgat cccacctggt accccggcga
      421 cggcgcccca tgggcgcccc tcaagctgta tcaattcgag atcgcgcagg agatcttcgc
      481 gggttgggac gccccccttt ccggggttcc gcgcgcgaag cttaccgcct tcatcgacac
      541 ctcggagcag gtggaaaaga agatacgggc cttcgattgc cacaagacgc aggcgaagga
      601 cacccggcgg ctcctcgaac gtcccggtta tcgggagttc gcgcggcagg aaacgtacgt
      661 ccttgccagg acgcggcttc ccgggctacc cttgcccgag gacgacctgc tgtccgggat
      721 tccggacgat tgaagcattg aggaaggggc ggcacggtgg acgtagggat cttcgggaac
      781 acgggatcgg ggaagagcac gctgttccgc tcgctttcgg gcacagcgca ggcgagcgcc
      841 caggggaaga gcgcgggagt gtgcgccatc aaggtcccgg acgagcgggt cgaccggatg
      901 gccgagatct tccacccgaa gaaggtcacc tacatctcga tggccttcca cgatatcgac
      961 gcgggggaga cggacctcct ctcgccgcag gcccttacgg agctccggag catcgaggta
     1021 ttggcgctgg tcgttcgggc cttcgccgac gattaccacc cggcgcctcc cggcggcctg
     1081 gacccggcgg cggaattccg cgaactctcc tccgccatcg tcctctccga ttacctcgtc
     1141 gcgcagaaga ggatcgagcg gatgacgaag gaggcgaagc gggacgcgga gtggaccgcc
     1201 ctccacaagg cgatcgcggc gttcgagcgg gacgttcccc ttcggaacat cgacctgtcg
     1261 gccgaggagg aacgggtcct ctcgggattc cggttcgtaa gccgcctccc gacgctcatg
     1321 atcctgaacg tcggcgaagg ggaagcgacg tcggagacgt accccgacgt ggcgaaagag
     1381 gcggagagag cgaaggttcc cctggtgcgc ctgtgcgcaa aggtcgagga ggagatcgcc
     1441 cagctgtctc cggccgagca ggccgacttc ctgaaggaga tgggaatcgc gcggtccgcc
     1501 cgggaccagc tcgttcgcgg cgccttcgag gcgacgcgct atatctcctt cctgacggtg
     1561 ggggaggacg aggtgcgcgc ctggaacgtg cgggagggaa gcactgcacc gacggcggcg
     1621 ggaaaaatcc actccgacct ggaaaagggg ttcatccggg ccgaggtcat ctcctccgac
     1681 gatttcctgc ggtgcgggtc gatggcgaag gccaagacgg aaggaaagct gcggctcgag
     1741 ggaaaggagt acgtcgtcaa ggacggggat atcgttcacg tccggttcaa cgtgtgaaat
     1801 ggtccgcgga tatactgccg ccccccgcgg cgaaatttcc gtaaagtttc cggatttcgg
     1861 cggcgataag ggaatcatgg gctctgcaac cgataccccg gacgccaggg aaggcgcgcc
     1921 aaaggtacgc gtcctcgtcg tcgatgacga ggaattcctt cgttccatcg tccgggagcg
     1981 cctcgaaatc gcagggtact ccgtggaaga ggcgtccaac gggaaagagg cgctcgtcat
     2041 gctcgagggc agcggcccgt acagcgtcct gctcaccgat atccggatgc ccgtcatgga
     2101 cgggatcacg cttctcggcg aatgggggaa gaagtccccc gggaccgcgg ggatcgtcat
     2161 gtccgccaac gccgagctcg acaccgccgt ccacgcgctc aagatggggg cgtgcgacta
     2221 catcacgaaa ccgttcaact tcgacgtcct cctgatcacc atcgagaatg cgctgcggaa
     2281 gaaggatctc gagcggcagc tcgacgatta ccggatgaac ctcgaggtaa aagtgaaaga
     2341 gcagaccgac gtgatcaact cgaattacgt ccgcttcatc gactcgttga tcaggacgct
     2401 cgaggcgaag gattcctaca cccgcggcca ctcccagcgg gtgacgcgct ggtcggtggc
     2461 catcgcggag gagctgggga tggccggcca ggagctcgag gatctttacc gggcatccgt
     2521 tctgcacgac ctcgggaaga tcggcgtcaa ggaagcggtc ctgaacaagc ccggaagact
     2581 cacggaagag gagttcgcgg agatcgtccg ccaccccgag aaggccgtcg agatcctcga
     2641 gccgatcgac ttctacaagc ccattttccc cgccatccgc caccaccacg agcggttcga
     2701 cgggaagggg tacccctcgc gcctcgcggg gaaaaacatc cccctcgcct cccgcatcat
     2761 gacgatcgcc gacaccttcg acgccatgac ctccacccgc gcttacagga aggcgctccc
     2821 c
//
LOCUS       DATGYW010000222         1942 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_234763, whole genome shotgun sequence.
ACCESSION   DATGYW010000222 DATGYW010000000
VERSION     DATGYW010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1942)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1942)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234763"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..903
                     /locus_tag="VK429_03055"
     CDS             <1..903
                     /locus_tag="VK429_03055"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLN90821.1"
                     /translation="VTGEAIEILSRSVNKNVEIHTDFQDPREPVSGDAGTLVQALLNL
                     GVNASDAMPGGGHLTFATAPFVSNGEVYLNGVLVPEGRYVSICVADTGSGIPEEIRDE
                     VFAPFFTTKAPGEGTGLGLSMVYSCVRTHGGFIRLVSSVGVGTTFQILLPVMEASGDG
                     DEPREPETEIPRGVETVLAVDDEEIPRNLLCDMLRSLGYTTLPAASGEEGIEILRYAP
                     EKVDLVVVDRIMPGMDGVETLARIRDLRPSLPTILCSGTSEAEKTRSGAVPDGFDDFL
                     QKPYERETLARTVRSVLNARLSKY"
     gene            1070..1843
                     /locus_tag="VK429_03060"
     CDS             1070..1843
                     /locus_tag="VK429_03060"
                     /inference="COORDINATES: protein motif:HMM:NF005413.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliA/WhiG family RNA polymerase sigma factor"
                     /protein_id="HLN90822.1"
                     /translation="MRQGQAAVSKEKIRKTSPRKSRKPDRDAIVEEFLPSIRIHAARL
                     KLRIPPHIETDDLVSSGVVGLLDALNRYDDTRGIKFKTYAEFRIRGAMLDYLREMDWF
                     PRSARQHSTRLQQTYTRLENILGRAPEEEEVAEKLGVTVDELRKQLATFMGMTVFSLD
                     ALQDEDEESGAGWRHVLSEAAMDESREEELTRELKDVLGKAIDMLPEREQQLIAFYYQ
                     EDLTLREISRIFGLGEPRVCQLHAQAVLRLKGKINRHFR"
BASE COUNT          378 a          626 c          615 g          323 t
ORIGIN      
        1 gtgaccggag aggcgatcga gatcctttcc cgctccgtga acaaaaacgt cgagatccac
       61 accgatttcc aggacccgcg ggaaccggtg tcgggcgacg ccgggacgct cgtgcaggcg
      121 ctcctgaacc tgggggtcaa cgcctccgac gccatgcccg gcggggggca cctgacgttc
      181 gccaccgccc cctttgtttc caacggagag gtctacctga acggcgtcct cgttcccgag
      241 gggcggtacg tctccatctg cgtggccgac acgggaagcg gcatcccgga ggagattcgc
      301 gacgaggtct tcgctccctt cttcacgacc aaggcgccgg gcgagggtac gggactcggt
      361 ctctcgatgg tgtacagctg cgtccgcacc cacggcggat tcattcgcct cgtgagcagc
      421 gtcggcgtgg ggacgacgtt ccagatcctc ctcccggtca tggaagcgtc gggggatggc
      481 gacgaacccc gcgagcccga aacggagatc ccacggggag tcgagaccgt gctcgccgtc
      541 gacgatgagg aaatcccccg gaacctcctg tgcgacatgc tccgttcgct gggatacacg
      601 accttgcccg cggcctccgg cgaggagggg atcgagatcc ttcggtacgc gccggaaaag
      661 gtggacctgg tggtcgtcga ccggatcatg ccggggatgg acggcgtcga gaccctcgcg
      721 cggatccgcg acctccgccc gtccctgccg acgatccttt gctccggaac ctccgaggcg
      781 gagaaaacgc gctccggggc cgttccggac gggttcgacg atttcctcca gaagccgtac
      841 gagcgggaga cgcttgcccg cacggtgcga tccgttctca acgcaaggtt gtcaaaatat
      901 tgacggttta atgggagtat tgacgctctc ccccgcctcc ccctcggtcc tcgaaataat
      961 aaccagataa atatcaagta cttgcctgca aagaccggat ggcacaccgt ttgctctcct
     1021 gttgggcgtc acggttcatc acggacccca acaaacgagg acaaacgcca tgaggcaggg
     1081 acaggcagcg gtttccaagg agaagatccg aaagacatcc ccccggaaat cccgcaaacc
     1141 ggaccgggac gcgatcgtcg aagagttcct cccaagcatc cggattcacg ccgcgcgcct
     1201 gaagctgcgc atccctcccc acatcgagac cgacgatctc gtgagctccg gcgtcgtggg
     1261 tctgctggac gccctcaacc ggtacgacga cacccgcggg atcaagttca agacgtacgc
     1321 cgagttccgg atccgcgggg ccatgctcga ctacctccgc gagatggact ggttcccgcg
     1381 gtcggcacgg cagcactcga cccggctgca gcaaacctac acccggctcg aaaacatcct
     1441 cggaagggcc cccgaggaag aggaggtcgc tgagaagctg ggggtcaccg tcgacgagct
     1501 tcgcaagcag ctggcgacgt tcatggggat gaccgtcttc tccctcgatg cgctccagga
     1561 cgaggacgag gaatccggcg cggggtggcg tcacgtgctg tccgaggcgg cgatggacga
     1621 aagccgggaa gaggagctca cccgggaact gaaggacgtc ctcgggaagg cgatcgacat
     1681 gctccccgag cgcgaacagc agttgatcgc gttctactat caggaggacc tgacccttcg
     1741 ggagatcagc cggatcttcg ggctgggcga gccccgcgtc tgccagctcc acgcgcaggc
     1801 ggtcttgcgg ctgaagggaa agatcaaccg tcacttccgg taggggttgc ccgttcgtgg
     1861 taccatgtgc ggaccgtttc ctggaagagg tccgacgttg caggtttcca aaaggatggc
     1921 catccacggc cttaacatct cc
//
LOCUS       DATGYW010000223         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_288537, whole genome shotgun sequence.
ACCESSION   DATGYW010000223 DATGYW010000000
VERSION     DATGYW010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288537"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1634
                     /locus_tag="VK429_03065"
     CDS             <1..>1634
                     /locus_tag="VK429_03065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HLN90823.1"
                     /translation="LSPAISIEQKSVGKNPRSTVGTVTEIYDYLRLLFASIGRFHCPS
                     CGKEIRRQTVTQIVDAVMAMGDGARVQLWAPIVRGRKGEYRKELAKLSRDGFSRVVVD
                     GETRDPAEPIVLDKQRKHDIDVVVDRLKVSEGSRGRLADSVALCLKLSEGLVRVVDGQ
                     GNGTICSEKFACPDCGVSLPEVAPRLFSFNSPHGACPECDGLGSTIYFDPDLVVPDPG
                     KTIRQGAIDPWSRRTQIFYRQTLASLASHYRFSLDDPFGKLPSPVRRLLLFGSAGEPV
                     RFALEEGDRQFSFTKPFEGVVNNLERRFRETDSEDVREELSRYMNNRPCRACGGARLK
                     KEALCVTVGGKGIDGVTALPVGEALAFFRDLPLSSREEEIASRILKEIRSRLTFLVNV
                     GLSYLTLSRASATLSGGEGQRIRLATQIGASLMGVLYILDEPSIGLHQRDNRRLLSTL
                     TRLRDLGNTVLVVEHDEETIRTADFVIDMGPGAGEHGGHVVAAGPPEEIVRCEASLTG
                     RYLAGKKEIPVPRERRRFNGHALRLEGCRANNLKGI"
BASE COUNT          254 a          544 c          577 g          259 t
ORIGIN      
        1 gctctccccc gccatctcga tcgagcagaa gtcggtcggg aagaatcccc gctccaccgt
       61 cgggacagtc acggagatct acgactacct gcggctgctc ttcgcttcca tcgggcggtt
      121 ccactgtccc tcctgcggga aggagatccg ccggcagacg gtgacgcaga tcgtcgacgc
      181 cgtgatggcg atgggggacg gcgcgcgcgt ccagctgtgg gcgccgatcg tccgagggcg
      241 caagggggag tatcgcaagg agctcgcgaa gctctcccgc gacggttttt cccgcgtggt
      301 ggtggacggg gagacgaggg accccgcgga gccgatcgtc ctcgacaagc agcgcaagca
      361 cgacatcgac gtcgtcgtgg accggctgaa ggtctcggaa ggatcgcgcg gccggctggc
      421 cgactccgtg gcgttgtgtc tgaagctgtc cgaggggctg gtgcgcgtgg tggacgggca
      481 ggggaacggc acgatctgca gcgagaagtt cgcctgcccc gactgcggcg tgagcctccc
      541 cgaggtcgca ccgcgcctgt tctccttcaa cagcccccac ggcgcgtgcc ccgagtgcga
      601 cgggctcggg tcgacgattt acttcgaccc cgacctggtg gtccccgacc ccgggaagac
      661 gatccggcag ggggcgatcg acccatggag ccgccgcacg cagatcttct atcgccagac
      721 ccttgcctcc ctcgcgtccc actaccggtt ctccctcgac gatccgttcg gaaagctccc
      781 ttcgcctgtt cgacgcctcc tcctcttcgg atcggccgga gagccggtcc ggttcgccct
      841 cgaggagggg gaccggcaat tctccttcac caagccgttc gagggggtgg tgaacaacct
      901 cgagcggcgc ttccgggaga ccgactccga ggatgtgcgg gaagagctct cccggtacat
      961 gaacaaccgg ccgtgccggg cgtgcggcgg ggcacggctg aagaaagagg cgctgtgcgt
     1021 caccgtcggg gggaagggga tcgacggcgt gaccgccctg ccggtggggg aggcgctcgc
     1081 cttcttccgc gacctgccgc tgtcgtcccg cgaggaggag atcgcttccc gtatcctgaa
     1141 ggagatccgg tcgcgactca ccttcctcgt gaacgtgggg ctctcctacc ttacgctgtc
     1201 ccgggcctcc gcgacccttt ccggcggcga gggccagcgg atccgtctgg caacccagat
     1261 cggcgcgtcg ctgatgggcg tcctctacat cctcgacgag ccgtccatcg ggcttcacca
     1321 gcgggacaac cggcggctcc tgtccaccct gacccggctg cgcgacctgg ggaacacggt
     1381 gctggtcgtc gagcacgacg aggagacgat ccggaccgcg gacttcgtga tcgacatggg
     1441 acccggagcg ggagaacacg gcgggcacgt ggtggcggcg ggcccccccg aggagatcgt
     1501 ccggtgcgag gcgtccctca cggggcggta ccttgccggg aagaaggaga tccccgtgcc
     1561 gcgggagcgg cggcgcttca acgggcacgc gctgcggctg gagggttgca gggcgaacaa
     1621 tctgaaggga atcg
//
LOCUS       DATGYW010000224         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_288614, whole genome shotgun sequence.
ACCESSION   DATGYW010000224 DATGYW010000000
VERSION     DATGYW010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_288614"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="VK429_03070"
     CDS             complement(<1..210)
                     /locus_tag="VK429_03070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009015368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside monophosphate kinase"
                     /protein_id="HLN90824.1"
                     /translation="MGIILLGPPGAGKGTQAKKLTQAFSIPQISTGDMLRAAVKNGTE
                     LGKKAKAFMDAGGLVPDEVVIGIVKE"
     gene            complement(218..1525)
                     /gene="secY"
                     /locus_tag="VK429_03075"
     CDS             complement(218..1525)
                     /gene="secY"
                     /locus_tag="VK429_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011416235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HLN90825.1"
                     /translation="MLDGFQNITRVPELKRRILVTGLLLIVYRIGIHIPTPGIDNLAL
                     KAVFDSQAGTLFGLIDMFSGGALARFSIFTLGIMPYISSSIILQLLTVVIPQLEKLSK
                     EGELGRRKITQYTRYGTIVLSVIQGMGIAVGLESVSAGTGSVVYHPGWAFRIMTVITL
                     TSGTAFLMWLGEQITERGIGNGISLIIFAGIVARFPSGLVRTVTLVRTGEMNIFAGLF
                     LLALMVAVVAVIIFFERAHRRIPVQYARRIVGRKVYGGQSTHLPLKVNTAGVIPPIFA
                     SSILLFPATIASFIKHPITRTISDALTPGRVGYELLFVAFIIFFCYFYTAVTFNPVDV
                     ADNMKKYGGFVPGIRPGKKTAEYIDKILTRITLGGAIYVSVICVLPSILIARFNVPFY
                     FGGTGLLIVVGVAMDTVQQIESHLITRHYEGFLKKGQMKGRRG"
     gene            complement(1530..>1706)
                     /locus_tag="VK429_03080"
     CDS             complement(1530..>1706)
                     /locus_tag="VK429_03080"
                     /inference="COORDINATES: protein motif:HMM:NF013024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uL15m family ribosomal protein"
                     /protein_id="HLN90826.1"
                     /translation="SVVDVETLRQEGLVKGACPGGVKLLGNGEVTRKLIVKVDRASKA
                     AVEKVAAAGGTVEV"
BASE COUNT          313 a          551 c          535 g          307 t
ORIGIN      
        1 ctcctttacg atgccgatga ccacctcgtc ggggaccagt ccgcccgcat ccatgaacgc
       61 cttggccttc ttgccaagct ccgtcccgtt cttcaccgcc gcccgcagca tgtcccctgt
      121 cgagatctgc ggtatggaga acgcctgggt caacttcttg gcctgggtgc ccttccccgc
      181 gccggggggg cccagaagga tgattcccat catcggatta tcccctcctc cccttcatct
      241 ggcctttctt taggaaccct tcgtaatgcc gcgtgatcag gtgcgactcg atctgctgca
      301 ccgtgtccat cgcgaccccc accacgatca ggagtcctgt cccgccgaaa tagaacggga
      361 cgttgaaacg ggcgatgagg atgctgggca ggacgcagat gacggacacg tagatcgcgc
      421 cgcccagcgt gatccgcgtc aggatcttgt cgatgtactc cgccgtcttc tttccgggtc
      481 gaatcccggg gacgaagcct ccgtacttct tcatgttgtc cgcgacgtcg accggattga
      541 acgtgaccgc cgtgtaaaag tagcagaaga agatgatgaa ggcgacgaac agcagttcgt
      601 acccgacccg gcccggcgtc agggcgtcgg aaatcgtccg cgtgatcgga tgcttgatga
      661 agctggcgat cgtcgcgggg aagagcagga tcgaggaggc gaagatcggc ggaatgacgc
      721 cggccgtgtt caccttcagg ggcaggtggg tgctctgccc gccgtagacc tttcgcccga
      781 cgattctgcg ggcgtactgt accgggatcc gccggtgcgc ccgctcgaaa aagatgatga
      841 cggcgacgac ggcgaccatg agcgccagca ggaacagccc ggcgaagatg ttcatttccc
      901 cggtgcgcac cagggtgacg gtgcggacca ggccgctcgg gaaccgggcc acgataccgg
      961 cgaagatgat gagggagatc ccgttgccga tcccccgctc cgtgatctgt tcccccagcc
     1021 acatcaggaa cgccgttccc gaggtgaggg tgatgaccgt catgatccgg aacgcccatc
     1081 ccgggtggta gacgacggat cccgtccccg ccgaaacgct ttcgaggccg acggcgatcc
     1141 ccatcccctg gatgacggag aggacgatcg tgccgtaccg ggtgtactgc gtgattttcc
     1201 gccggccgag ctccccttcc ttggagagct tctcgagctg cgggatgacg accgtcagca
     1261 gctggaggat gatcgaggag ctgatgtacg gcatgatccc gagcgtgaag atggagaaac
     1321 gcgcgagcgc ccccccggag aacatgtcga tcagcccgaa gagggtaccc gcctggctgt
     1381 cgaacaccgc cttgagcgca aggttgtcga tccccggcgt ggggatgtgg atcccgatgc
     1441 gatagacgat gagcaggagc cccgtgacga ggatccgccg cttgagctcg ggaacccggg
     1501 tgatgttctg gaaaccgtcg agcaccggct cagacctcca cggtcccgcc ggcggcggcg
     1561 accttctcga cggccgcctt gctggcccga tccaccttca cgatgagttt ccgggtgacc
     1621 tcgccgtttc cgagaagctt gacccccccc ggacaggcgc cctttaccag gccctcctgc
     1681 cgaagcgtct cgacgtcgac gacgga
//
LOCUS       DATGYW010000225         1581 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_14325, whole genome shotgun sequence.
ACCESSION   DATGYW010000225 DATGYW010000000
VERSION     DATGYW010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14325"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1581
                     /locus_tag="VK429_03085"
     CDS             <1..>1581
                     /locus_tag="VK429_03085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013964238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic beta 1-2 glucan synthetase"
                     /protein_id="HLN90827.1"
                     /translation="AAARGALESVWEYWKRTLGTVQVETPDPAVNVLANGWLLYQALA
                     CRIWGRSGYYQSGGAFGFRDQLQDAMALVHSEPQLLREHLLRCAGRQFREGDVQHWWH
                     PPSGRGVRTKCSDDFLWLPLATSRYVLDTGDTGVLDEPVHFIEGRPVNVEEDSYYDLP
                     VRSDEAASLYEHCRRAILRGLGTGEHGLPLMGTGDWNDGMNLVGEHGKGESVWLGFFL
                     YEVLMRFTEVARKAGDVTFAERCRVEAAQLRLKIEQNGWDGEWYRRAYFDDGTPLGSA
                     SNAECRIDSIAQSWSVLSGAGDPGRSRMAMDAVDQRLVRRDHALIQLLDPPFDKSALN
                     PGYIKGYVPGVRENGGQYTHGAIWAAMAFAALGDSRRAWELLGMINPVTHSKSPEGIA
                     VYKVEPYVVAADVYAFPPHTGRGGWTWYTGSAGWMYRLIVESLLGLKLEVDKLRFSPC
                     FPADWKEFKVYYRYRETDHEINVRQQPGGESRTIVTVDGMERQDGAIPLVLLPDVDFI
                     VRLAIPVVHLEPLPVRGEA"
BASE COUNT          278 a          467 c          557 g          279 t
ORIGIN      
        1 gcagcggcgc ggggggcgct tgaatcggtc tgggagtact ggaagcggac tctcgggacc
       61 gtgcaggtgg aaacccccga ccccgccgtc aacgttctgg ccaacggttg gctcctttac
      121 caggccctgg cgtgccgtat ctgggggcgg agcgggtact accagtcagg gggggccttc
      181 gggttccgcg accagttgca ggacgccatg gcgctggtgc actcggagcc gcaactccta
      241 cgcgaacatc tgctgcgatg cgcgggtcgc cagttccgcg agggggacgt ccagcactgg
      301 tggcatcccc cctcgggccg gggcgtgcgc acgaaatgtt ccgatgattt cctctggttg
      361 cccctggcga cgtcccgtta tgttctcgac accggggata ccggggtgtt ggacgaacct
      421 gtccacttca tcgaagggcg accagtgaac gtggaggagg attcctacta cgaccttccc
      481 gtccggtcgg acgaagcggc cagcctgtac gaacattgca ggcgagccat cctgagaggc
      541 ctcgggaccg gcgagcacgg cctgccgctc atggggaccg gcgactggaa cgacgggatg
      601 aacctcgtgg gagagcacgg caaaggggaa agcgtctggc tggggttctt cctttatgaa
      661 gtgctcatgc ggttcaccga ggttgcacgc aaggccggtg acgtgacctt cgccgaacgt
      721 tgccgggtgg aggcggccca attgcgcctg aagatcgagc agaacggctg ggacggcgag
      781 tggtaccgcc gcgcgtactt cgacgacgga acgccgctcg ggtcggccag caacgccgaa
      841 tgccggatcg attcgatcgc gcaaagctgg tcggttctct ccggcgccgg cgatcccggg
      901 cgatcccgca tggcgatgga cgcggtggat cagcgcctcg ttcgccggga ccacgcgttg
      961 atccagctcc tggatccgcc gttcgacaaa tcggctctga atcccggcta cataaaaggg
     1021 tacgtcccgg gggtgaggga aaacgggggc cagtacacgc atggggcgat ctgggcggcg
     1081 atggcgttcg ccgcactggg ggacagccgg cgcgcgtggg agctgttggg gatgatcaac
     1141 ccggtgaccc actcgaagtc tcccgagggg atcgcggtct acaaggtgga accgtacgtg
     1201 gtcgcggccg acgtctatgc gttcccgccg cacaccggtc gcgggggatg gacctggtac
     1261 acgggctcgg ccggttggat gtaccggctg atcgtggaat ccctcctggg tctgaagctg
     1321 gaagtggaca agctgcgttt ttccccgtgc ttcccggcgg actggaagga attcaaggtg
     1381 tactaccggt atcgcgagac ggaccatgaa atcaatgtcc ggcaacaacc cggtggggaa
     1441 agcaggacga tcgtgaccgt tgacgggatg gaacggcagg acggggcgat ccccctcgtg
     1501 ttgttgccgg acgtcgattt catagtccgt ctcgcgatac cggtagtaca ccttgaaccc
     1561 cttccagtcc gcggggaggc a
//
LOCUS       DATGYW010000226         2102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_338415, whole genome shotgun sequence.
ACCESSION   DATGYW010000226 DATGYW010000000
VERSION     DATGYW010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338415"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..857
                     /locus_tag="VK429_03090"
     CDS             <1..857
                     /locus_tag="VK429_03090"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020676408.1"
                     /note="an AccC homodimer forms the biotin carboxylase
                     subunit of the acetyl CoA carboxylase, an enzyme that
                     catalyzes the formation of malonyl-CoA, which in turn
                     controls the rate of fatty acid metabolism; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HLN90828.1"
                     /translation="GGGGRGMKIVHSPASFINAFLTAQSEALSAFGVPDVYIEKYFDN
                     ARHVEVQVMGDRHGNVIHLGDRDCSIQRRHQKLIEESPAPALPVRVRNRMWKAAIDAA
                     VGVKYDSVGTIEFLYVPDGEFHFLEMNTRIQVEHTVTEMVTGIDIVREQIRIADGKKL
                     RYAQKDVPQRGHAIEVRINAEDPETFLPFPGPIQTCIFPGGFGVRVDTAIYPGYVVPS
                     TYDSLLGKLIVHGDDRNEAIMRMRRALDEVRIEGVRTTVAFHKKMMVNSDFVEARLST
                     NFLEKNRP"
     gene            860..>2102
                     /locus_tag="VK429_03095"
     CDS             860..>2102
                     /locus_tag="VK429_03095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90829.1"
                     /translation="MGFLDSLKKMLSSQDQEDRVSLSRKVQASPNDPQARQKLGIFLM
                     HQGEVVEGLDQLARAAVLYEKDGFATKAIAVLRQMQKHDPGNNDFQKWLIRLLAQEGL
                     SSDAQAELRKVASDPARFTSDEQRLDFFRQTAEFLKKNPLPRFYICDILRGQKKLYEA
                     VNELEKAVPQMESSGMYAEFSERLRSIVSHAGHDLSVLESCGFLWLSIGMPEEGLPIL
                     DRVAEAASADDDPGREATVREVLDAIRGGWDVAAAGVSSFTEAARKRAEPEPSRVEPP
                     PSAPVAKPSSPPATAQEGYEHEENIVRSALGRLQAKVDEEIGDTDLEARYNLGIAYKE
                     MGLLDEAVTEFRLAMRKPELFVAAGSHLADTLSDRADIEGALAVLDAVLAASTGGEDV
                     LRDVRYHKAVLLENTGRRDEAR"
BASE COUNT          390 a          676 c          696 g          340 t
ORIGIN      
        1 ccgggggagg cggccgtggg atgaagatcg tccacagccc ggcttccttc atcaacgcgt
       61 tcctcacggc ccagtcggag gcgctgtcgg ccttcggcgt tcccgatgtc tacatcgaga
      121 aatatttcga caacgcccgc cacgtcgagg tccaggtgat gggggaccgc cacgggaacg
      181 tgatccacct cggggaccgc gactgctcca tccagcgccg ccaccagaag ttgatcgagg
      241 aatcgcccgc ccccgccctc ccggtccgtg tccggaaccg gatgtggaag gcggcgatcg
      301 acgctgccgt cggcgtgaag tacgacagcg tcgggaccat tgagttcctg tacgtgcccg
      361 acggcgagtt ccattttctc gagatgaaca cgcggatcca ggtcgagcac acggtgacgg
      421 agatggtgac cggcatcgac atcgtgcgcg agcagatccg gatcgcggac ggcaagaagc
      481 tgcgctacgc gcagaaggac gtacctcagc gcggccatgc gatcgaggtt cgcatcaacg
      541 cggaggaccc ggagaccttc ctcccgttcc ccgggccgat ccagacctgc atcttccccg
      601 gggggttcgg tgtgcgcgtc gacacggcga tctaccccgg ttacgtcgtc ccatcaacct
      661 acgactccct tctggggaag ctgatcgtgc acggggacga tcggaacgag gcgatcatgc
      721 ggatgcgaag ggccctcgac gaggtccgga tcgagggcgt gcggacgacc gtggcgttcc
      781 acaagaagat gatggtcaac tccgacttcg tcgaggcgag gctctcgacg aatttcctcg
      841 aaaagaacag gccctgaaca tgggattcct cgattccctc aagaaaatgc tctcctcgca
      901 ggaccaggaa gaccgtgttt ccctttcccg gaaggtgcag gcgtcgccga acgacccgca
      961 ggcccgtcag aagctcggca tcttcctgat gcaccagggg gaggtcgtag aggggctgga
     1021 ccagctcgcc cgcgccgccg tcctctacga gaaggacggg tttgccacca aggcgatcgc
     1081 ggtcctgcgc cagatgcaga agcacgaccc cgggaacaac gacttccaga aatggctgat
     1141 ccggctgctg gcgcaggagg ggctctcttc ggatgcgcag gcggagctcc ggaaggtagc
     1201 ctccgatccc gcgaggttca cctccgacga gcagcggctc gactttttcc ggcagacggc
     1261 ggagtttctc aagaagaacc ccctgccgcg gttctacata tgcgacatcc tccggggcca
     1321 gaagaaactg tacgaggccg tgaacgagct ggaaaaagcg gtcccgcaga tggagtcgag
     1381 cgggatgtac gccgaattct ccgagcgttt gcgctccatc gtgtcccatg ccggccacga
     1441 tctttccgtc ctcgagtcgt gcggtttcct ttggctttcg atcggaatgc cggaggaggg
     1501 gcttccgatc ctcgaccggg tcgccgaggc tgcgtccgcc gacgacgatc ccggacgcga
     1561 ggcgaccgtg cgggaggtcc tcgacgccat ccgcggcgga tgggatgtcg ccgccgccgg
     1621 tgtgtcctcc ttcacggaag cggcgaggaa gcgcgccgag ccggagccgt cccgggtcga
     1681 accgccgccg tccgctcccg tggcgaagcc gtcctccccg ccggcgaccg cccaagaagg
     1741 gtacgagcac gaggagaaca tcgttcggag cgctctcggc cgactgcagg cgaaggttga
     1801 cgaagagatc ggggacaccg acctcgaggc ccggtacaac ctcggaatcg cctacaagga
     1861 aatgggattg ctcgacgagg ctgtcaccga atttcgcctg gcgatgcgca agccggagct
     1921 tttcgtcgcg gcggggtcgc acctggccga cacgctgtcc gaccgcgccg acatcgaggg
     1981 agcgctcgcc gtgcttgacg cggtcctcgc cgcttccacc ggaggggaag atgtgctgcg
     2041 cgacgtgcgg tatcacaagg cggtgctcct ggagaacacc ggccgacggg acgaggcgcg
     2101 gg
//
LOCUS       DATGYW010000227         1868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_14387, whole genome shotgun sequence.
ACCESSION   DATGYW010000227 DATGYW010000000
VERSION     DATGYW010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14387"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..732)
                     /locus_tag="VK429_03100"
     CDS             complement(58..732)
                     /locus_tag="VK429_03100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009148171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HLN90830.1"
                     /translation="MRPLSADIVACPDCDLLQRIPALSHGGTACCQRCGRKLAICKPG
                     SLERTTALAVAAAIAFLIANLEPLMGLSVAGRESGTTIAGGAWQMWVQGERIAALLIA
                     LFGVIAPAVQIGFLLVILFSVRRPPAPHWVGTLLRWVEIAGAWSMVEVMMLGILVSLV
                     KIAALARVIPGVGIFATGGLILLLAAMSSSFDPREAWSRVRWVNGEGPQRALPSAGKD
                     AAEAGR"
     gene            complement(862..1458)
                     /locus_tag="VK429_03105"
     CDS             complement(862..1458)
                     /locus_tag="VK429_03105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90831.1"
                     /translation="MRRTGIALLAGLFVLSIAAGGWAAEKSSAKNVEPPAWKTSSLVE
                     ETATVTAVDQSTRMVTLKGPKGNSITFKASAEVRNLAQVHVGDEVKFAYYESIAVRVL
                     KTGEAFPTAGESAMAARAKAGEKPAGVVGTETTVNATITAIDKKAKTATLKGEDGKSV
                     TVTPLRPEKLNEVKVGDRLVITYTEAIAVKVEKAETKK"
     gene            1672..>1868
                     /locus_tag="VK429_03110"
     CDS             1672..>1868
                     /locus_tag="VK429_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008329815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HLN90832.1"
                     /translation="MSDKKWPRKLWSVLLAGLLVLPGGVLAQTAEKTPSKPFSREQLD
                     QLLAPVALYPDDLLTQLMMAST"
BASE COUNT          339 a          669 c          528 g          332 t
ORIGIN      
        1 ggccgcacgc ctcgcacgag acgaacccct ctcgcaggcc ggtccgcacg acggtggtca
       61 tcgccccgcc tccgccgcat ccttccctgc ggaagggagc gcccgttgcg gtccttcacc
      121 gttcacccag cggaccctcg accaggcctc gcgcggatcg aagctggacg acatcgccgc
      181 gagcagcagg atgagcccgc cggtcgcgaa gatcccgacg ccgggaatca ccctcgcgag
      241 cgccgcgatc ttgaccagcg agacgaggat gcccagcatc atcacctcga ccatcgacca
      301 ggccccggcg atctccaccc agcgcagcag cgtgccgacc cagtgcggcg ccggcggccg
      361 ccgcacggag aacaggatca cgagcaggaa accgatctgc acggccggtg cgatcacccc
      421 gaagagcgcg atcagcaggg ccgcgatcct ttccccctgc acccacatct gccacgcgcc
      481 gccggcgatc gtcgtgcccg actcccgacc cgcgaccgac agccccatca gcggctccag
      541 gttggcgatg aggaacgcga tcgccgccgc gaccgccaac gccgtcgtgc gttcgaggga
      601 tcccggtttg cagatcgcaa gcttccgtcc gcaacgctgg cagcaggccg ttccgccatg
      661 cgagagcgcg ggaatgcgct ggagcaggtc gcagtccgga caggcaacga tatccgcgga
      721 caaaggcctc acacgggtat tgtatccgac agaatcaacg ggagggaatt aggaaaaggg
      781 gtgcggaccg gaggtccgca ccccttcgac atccgtccgg ggaatccgtg gaggcgatcg
      841 ggccgccgcg gatgcccagg gctatttctt cgtttccgcc ttctccacct tcaccgcgat
      901 cgcttccgtg taggtgatca ccaggcggtc ccccaccttg acctcgttga gtttctccgg
      961 gcgcaacggc gtcaccgtca cggacttccc gtcctcccct ttcagggtcg cggtcttcgc
     1021 cttcttgtcg atggccgtga tcgtggcgtt gacggtcgtc tccgtcccga cgactcccgc
     1081 cggcttctct cccgctttcg cgcgggccgc catcgcactc tcgcccgccg ttgggaacgc
     1141 ctcccccgtc ttcagcacac gcaccgcgat ggattcgtaa taggcgaatt tcacctcgtc
     1201 gcccacatgc acctgcgcca ggttcctgac ttccgcactc gccttgaacg tgatcgagtt
     1261 tccctttggt cccttcagcg tgaccatccg ggtcgactgg tcgaccgccg tgaccgtggc
     1321 cgtttcctcg accagcgagg acgttttcca ggcaggaggc tccacgttct tggcggaaga
     1381 tttctccgcc gcccacccgc ctgccgcgat cgaaagaacg aacagtcctg caagcaacgc
     1441 aattccggtt ctcctcatgc caatccccct tcatatttga tgttgcctac gatgaccgcc
     1501 aactcggaaa cgattcggcc ggacgtggac aaaccgtacc ttgcggcgag cctgattatt
     1561 gcaatttatc acgtccaagt aaagaattta tgtgaagaaa acatgtcgcc cctctgtgaa
     1621 aatttcagga tcatcggtat gatgtgttca tccggaacag taggaggtcc catgagcgac
     1681 aagaaatggc cccggaaact gtggagcgtc ctgctggccg gcctgctcgt cctgccggga
     1741 ggagtcctcg cccaaaccgc cgagaaaaca ccgtccaaac cgttctcccg ggagcagctg
     1801 gatcagctcc tcgccccggt tgcgctgtac ccggacgacc tcctgaccca gctcatgatg
     1861 gcctccac
//
LOCUS       DATGYW010000228         2055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_338482, whole genome shotgun sequence.
ACCESSION   DATGYW010000228 DATGYW010000000
VERSION     DATGYW010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338482"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..832)
                     /locus_tag="VK429_03115"
     CDS             complement(<1..832)
                     /locus_tag="VK429_03115"
                     /inference="COORDINATES: protein motif:HMM:NF013237.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLN90833.1"
                     /translation="MKKNRKVETIAAQAGVGADKAYGAVSVPIYTAAIYRYERFGKNK
                     GFDYSRGENPTRQATEKVLADLEGGTRAVAFSSGMAAISALMTLFRTGDHILCSDDLY
                     GGTYRLFEKLLRPYGLSFDYVDMGNPAAVRKNITGKTKALFIETPTNPLMKIADLKEA
                     ARIGREKGVLTVVDNTFMSPLLQRPLALGIDVVVHSATKFLGGHNDLIGGAVVTTDAA
                     VGEKVAFAQKAIGAIPSPFDCWLLLRGIKTLAVRVARAQENAEALARFLSGHPAVGKI
                     F"
     gene            complement(861..1097)
                     /locus_tag="VK429_03120"
     CDS             complement(861..1097)
                     /locus_tag="VK429_03120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015710295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HLN90834.1"
                     /translation="MTMPLLDITGDVCPMTFVKVKMGLQQIAPPGKLNVRLKEDALKN
                     VISSLKAEGHRVTNVSREGTIFLLEVEKTSGATK"
     gene            complement(1094..1969)
                     /locus_tag="VK429_03125"
     CDS             complement(1094..1969)
                     /locus_tag="VK429_03125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015907683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HLN90835.1"
                     /translation="MSEADDKELKKGGMMRQAEAGLFSVRLHVVGGRLATQQLRAIRD
                     AADRFGRGEIHLTTRQGVEIPHVPQDALAELKEFLAPSGVGVGVCGPTVRTVTACQGC
                     RVCPSGVIDSPELAEAVDRELYGKPVPHKFKVGISGCVNNCMKAEENDVGIKGWIEPR
                     WETPACTFCGVCQAVCPTKTISTSVDGRALIVDPTLCIGCGDCITSCPTGSMREEIRG
                     YRIFAGGKFGRRPSLGKRILGILRTKEEAMAAILAVLDFFRVHGKPRERFGDTLQGTG
                     YPALETFVKERTGLG"
BASE COUNT          309 a          720 c          629 g          397 t
ORIGIN      
        1 agaagatttt accgacggcg gggtgtcccg acaggaacct cgccaaggct tcggcgttct
       61 cctgggcgcg cgccacccgg acggccaggg tcttgatccc ccgcaggaga agccagcagt
      121 cgaacggcga ggggatcgcc ccgatcgcct tctgggcgaa ggcgaccttt tcgccgaccg
      181 ccgcgtccgt cgtgacgacc gctccgccga tcaggtcgtt gtgccctccc agaaacttgg
      241 tggcgctgtg gacgaccacg tcgatcccca gggccagcgg ccgctggagc aggggcgaca
      301 tgaaggtgtt gtccacgacg gtgaggaccc ctttttcccg gccgatcctc gccgcctcct
      361 tcaggtcggc gatcttcatc aggggattcg tcggtgtttc gatgaacagc gccttcgtct
      421 tcccggtgat atttttcctc acggcggccg gattccccat gtccacgtag tcgaaggaga
      481 ggccgtaggg gcgcaggagt ttctcgaaca ggcggtacgt cccgccgtag agatcgtccg
      541 aacagaggat gtggtctccc gtccggaaga gggtcatcag ggcggagatc gccgccatcc
      601 ccgaggaaaa tgcgacggcg cgggtaccac cctcgagatc cgcgagaacc ttctccgtcg
      661 cctgccgcgt cgggttctcg ccgcgcgagt agtcgaaccc cttattcttc ccgaagcgct
      721 cgtaccggta gatggcggcc gtgtagatcg gcacgctgac ggcgccgtac gccttgtccg
      781 cccccacccc cgcctgcgcg gcgattgtct cgaccttgcg gttttttttc aaggggtccc
      841 ccgtctccgt ctcccggttg ttactttgtc gctccggagg ttttttccac ttccaggagg
      901 aagatcgtac cttccctcga cacgttcgtc acgcggtgtc cttccgcctt cagggaggag
      961 atcacgttct tcagcgcatc ctccttcagg cggacgttga gttttcccgg cggggcgatc
     1021 tgttgcagcc ccatcttcac cttcacgaac gtcatggggc atacgtcccc ggtgatgtcg
     1081 agcagcggca tcgtcatccc agccccgtcc tctctttcac gaacgtttcc agcgcggggt
     1141 accctgtccc ctgcaaggtg tccccgaacc gctccctcgg cttcccgtga acccggaaga
     1201 aatcgaggac ggccaggatc gccgccatcg cttcctcctt cgtccgcaaa atcccgagga
     1261 tccgcttgcc gagggagggt ctcctgccga acttcccgcc ggcgaagatc cggtaccccc
     1321 ggatctcctc cctcatgctc ccggtggggc aggaggtgat gcagtccccg catccgatgc
     1381 acagcgtcgg gtcgacgatc agcgcgcggc cgtccaccga cgtcgagatc gtcttcgtcg
     1441 ggcagacggc ctggcagacc ccgcagaagg tgcaggccgg cgtttcccaa cgcggctcga
     1501 tccacccctt gatcccgacg tcgttctcct cggccttcat gcagttgttg acgcaccccg
     1561 agatgccgac cttgaacttg tgcggcaccg gcttgccgta gagttccctg tcgaccgcct
     1621 cggccagctc gggggaatcg atcaccccgc ttgggcagac gcggcacccc tggcacgccg
     1681 tcacggtgcg gaccgtgggt ccgcagaccc ccacgccgac gccggagggt gcgaggaact
     1741 ccttcagttc cgcgagggca tcctgcggta cgtgggggat ctccaccccc tgccgggtgg
     1801 tcaggtggat ctccccccgc ccgaaccggt ccgccgcgtc ccggatcgcc cgcagctgct
     1861 gcgtggcgag acgtcccccg accacgtgga gacggaccga gaacagcccg gcctccgcct
     1921 ggcgcatcat cccgcccttt ttcagctcct tgtcgtccgc ttcgctcatg cggtgaccgc
     1981 cacggtcggg acgccggcat cggccaagtg cggagcgtag tggcttgcgt atttgaagga
     2041 gctgtcgggc gagat
//
LOCUS       DATGYW010000229         1571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_396415, whole genome shotgun sequence.
ACCESSION   DATGYW010000229 DATGYW010000000
VERSION     DATGYW010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396415"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..464)
                     /locus_tag="VK429_03130"
     CDS             complement(<1..464)
                     /locus_tag="VK429_03130"
                     /inference="COORDINATES: protein motif:HMM:NF013216.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HLN90836.1"
                     /translation="MDRDEAFADIVLDRALRDAGFSDSRDRGLLTELVMGTLRRRGTI
                     DFALLPFLSRPLEQTDAYVRNALRVGAYQLFYTRIPDRAALNETVAAVKAARGGGAGG
                     FVNAVLRGIVRAGKIPVLPPEGDPRRLPAEGSAPRDLIDALAASLGETETRA"
     gene            complement(494..1408)
                     /gene="fmt"
                     /locus_tag="VK429_03135"
     CDS             complement(494..1408)
                     /gene="fmt"
                     /locus_tag="VK429_03135"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011339910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HLN90837.1"
                     /translation="MGTPGFAVPSLAALAEAVDVTLVLCNPDRPAGRGRSMASPQVKE
                     EAVRRGIPLFQPEKARHPDAVARIAAEAPDLVVVVAYGHILPKSILDIPRFGCINVHA
                     SLLPKYRGAAPINWAVARGETVTGITIMRMDEGMDTGPMLYAREMPIGEEDTAETMFA
                     KLSILGAEALREALRKLREGTLDETPQDAALATYAPMLKKEHGRIDWSRPAGEIRNLV
                     RGMTPWPSAFALHEGKTLKVLSSVLAAESGPSGASGEIVALGRDGISVSCGEGVLRLR
                     SVQPEGGKAMDAWAYAQGRRVAAGERLS"
     gene            complement(1456..>1571)
                     /locus_tag="VK429_03140"
     CDS             complement(1456..>1571)
                     /locus_tag="VK429_03140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009957923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HLN90838.1"
                     /translation="RIQAAGILSRALQHEIDHLDGVLFIDRLSSSATAYAK"
BASE COUNT          234 a          574 c          538 g          225 t
ORIGIN      
        1 tacgcccgcg tctccgtctc ccccagcgac gccgccaacg cgtcgatcag atcccgcggg
       61 gccgatccct ccgcgggaag ccggcggggg tctccctccg ggggaaggac gggaatcttc
      121 cccgcgcgga cgatcccgcg cagcaccgcg ttgacgaacc cgcccgcgcc gccgccccgc
      181 gccgccttga cggccgccac cgtttcgttc agcgccgcgc ggtcggggat gcgggtgtag
      241 aagagctggt acgcccccac ccggagggcg ttccggacgt acgcgtcggt ctgttcgagg
      301 ggacgggaga ggaacggcag cagggcgaaa tcgatcgtac cgcgccggcg caaggttccc
      361 atcacgagct ccgtcaggag cccccggtcg cgggaatcgg aaaagcccgc gtcgcgcagc
      421 gcgcggtcga gcacgatgtc ggcgaaggcc tcgtcgcgat ccacccgggc cagaaccgag
      481 atcgccgcat cccttacgat agccgttccc ccgccgccac gcgccggccc tgggcgtacg
      541 cccacgcgtc catcgccttt cccccctccg gctgcacgga ccggagccgg aggacccctt
      601 ccccgcagga taccgagatc ccgtcgcgcc cgagggcgac gatctcgccg gacgcccccg
      661 acggtccgga ttccgcggcg aggaccgacg agaggacctt gagcgtcttc ccttcgtgaa
      721 gcgcgaacgc ggagggccac ggcgtcatcc cgcggaccag gttgcggatc tctcccgccg
      781 gacggctcca gtcgatccgg ccgtgctcct tcttcagcat cggggcgtac gtcgcaaggg
      841 ccgcgtcctg cggcgtctcg tcgagcgtcc cctcccgcag cttgcgcaac gcctcgcgca
      901 gcgcctcggc cccgaggatc gacaatttgg cgaacatcgt ctccgcggtg tcttcttccc
      961 cgatcggcat ttcccgcgcg tacagcatgg gccccgtgtc cattccctcg tccatccgca
     1021 tgatggtgat ccccgtcacc gtctcgcccc ttgccaccgc ccagttgatc ggcgcggcgc
     1081 cgcgatattt cgggaggagg gaggcgtgga cgttgatgca cccgaaccgg gggatgtcga
     1141 ggatcgattt cggcaggatg tggccgtagg ccacgacgac gaccaggtcg ggcgcctcgg
     1201 cggcgatccg cgcgacggcg tcggggtggc gcgccttttc cggctggaag agcgggatcc
     1261 cgcggcgcac cgcctcctcc ttgacctggg gcgacgccat cgatcgtccg cgccccgcgg
     1321 gccggtccgg attgcacagg acgagggtca cgtccaccgc ttccgccagg gcggcgaggg
     1381 aagggacggc gaatcccggc gttcccatga acaccgtgcg caaccgggcg gcgccgggac
     1441 cgggcaacgg gaggatcact tcgcgtaggc cgtagcggag gaggaaaggc gatcgatgaa
     1501 aaggaccccg tcgagatggt cgatctcgtg ctgcagcgcg cgggagagga tcccggctgc
     1561 ctggatccga a
//
LOCUS       DATGYW010000230         1639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_396708, whole genome shotgun sequence.
ACCESSION   DATGYW010000230 DATGYW010000000
VERSION     DATGYW010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396708"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="VK429_03145"
     CDS             <1..563
                     /locus_tag="VK429_03145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90839.1"
                     /translation="PVALLVFLLVSACGGPAKGPESVSPPGAWRPFEGTGSATGHRQT
                     LQLGPDRKVSIANFSGSLLLIGEQRLGEGFRVDVIGTTDSLKGAAAWCVWTDTRGDQV
                     FSEIRGGPISTGARFTGTLLGGTGRYAGVTGEYEFEWQYVIESGEGNIQGRITGLRGR
                     FRRDVPPPSPERKTSHGKDGSVLEPA"
     gene            550..>1639
                     /locus_tag="VK429_03150"
     CDS             550..>1639
                     /locus_tag="VK429_03150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015766336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HLN90840.1"
                     /translation="MSPPSPAASTFLVRGIALAVALGIWFAPVPEGLTPKAWHLFAIF
                     GAAILSVILNAFPLLTAAMIALAAAVLTGIVSPAKAFGGFANGSVLLVVVAFLVARGV
                     VKSGLGRRLSYMVVAVFGRSTLGLAYSIFVTDAVIAPAFPSNTARGGVLFPIVLSLAQ
                     SGGSSPEDGTARRMGAFLMFCGMASLSVSSALWLTATSANPIGVEIGRTFGLSIGFGS
                     WLFAASVPTLVAILLLPLVLYKIFPPEVKETPSAPAAAREALRTMGPLSRDEKVVAVA
                     FVLMVAGWVLAGTLKLDVTAVAFAGLGALLATSVLTLEDFSREGDTLATFLWLAVLFA
                     LSGQLNEMGFMGYVGERLAGRLEGVPWPV"
BASE COUNT          217 a          549 c          574 g          299 t
ORIGIN      
        1 tcccggtcgc actgctggtc ttcctgctgg tgtcggcgtg cgggggaccg gcaaaaggtc
       61 cggagagcgt atcgcctccg ggcgcgtggc gtcccttcga agggacgggg tccgccacgg
      121 gccaccggca gacgcttcaa ctgggcccgg accgcaaggt ctccatcgcc aatttctccg
      181 gatcgctgct gctcatcggg gagcaacggc tgggcgaggg attccgggtc gatgtcatcg
      241 ggaccaccga cagcctgaaa ggcgccgccg cctggtgcgt ctggaccgat actcgcggcg
      301 accaggtctt cagcgagatt cggggtggac ccatcagcac cggagcccgc tttacgggta
      361 ctctgctggg agggacgggg cgatacgcgg gcgtgaccgg tgagtacgag ttcgagtggc
      421 agtacgtcat cgaatccggg gaaggaaaca tccaggggcg gatcacgggg ctccggggcc
      481 gattccgtcg ggacgtgccg cccccttccc cggagcggaa gacatcccac ggaaaggacg
      541 gatccgttct tgagcccgcc tagcccggcc gccagcacgt tcctcgtccg ggggatcgcc
      601 ctggccgtcg cgctcgggat ctggttcgcc cccgtcccgg aagggctgac gcccaaggcg
      661 tggcacctct tcgccatctt cggggccgcg atcctctccg tgatcctgaa cgcgttcccc
      721 ctgctgaccg ccgccatgat cgccctggcg gccgcagtgc tcacgggaat cgtgtcgccc
      781 gcgaaggcct tcggggggtt cgcaaacggg tccgtcctcc tggtggtggt cgcgttcctg
      841 gtggcccggg gcgtggtgaa gtcgggactg gggcgccgat tgagctacat ggtggtggcg
      901 gtcttcggcc gctccacgct ggggctggcg tacagcatct tcgtcacgga cgccgtcatc
      961 gctcccgcct tcccgagcaa caccgcgcgg ggcggcgtac tctttcccat cgtgctctcc
     1021 ctggcgcaat cgggaggttc gagtccggag gacgggacgg cgcgccggat gggcgctttc
     1081 ctcatgttct gcggcatggc gagcctgagc gtttcctccg ccctctggct cacggccacg
     1141 tccgccaacc ccatcggggt ggagatcgga cggacgttcg gcctttctat cggcttcggc
     1201 tcctggctgt tcgccgcgtc ggtcccgacg ttggtggcga tcctcctcct ccctctcgtg
     1261 ctctacaaga tctttccgcc ggaagtgaag gaaaccccgt cggctccggc cgccgcccgc
     1321 gaggcgctaa ggaccatggg gcctctgagc cgggacgaga aagtcgtggc ggtggcgttc
     1381 gtcctcatgg tggcggggtg ggtcctcgcc ggcaccctga agctggacgt gaccgccgtg
     1441 gcgttcgccg gcctcggcgc tcttctggcc accagtgtcc tcaccctcga ggatttcagc
     1501 cgcgaagggg acacgctcgc caccttcctc tggctggccg tactcttcgc gctgagcgga
     1561 caactcaacg agatggggtt catggggtac gtgggggagc ggctggccgg caggctcgag
     1621 ggcgtcccgt ggccggtcg
//
LOCUS       DATGYW010000231         3267 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_236025, whole genome shotgun sequence.
ACCESSION   DATGYW010000231 DATGYW010000000
VERSION     DATGYW010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3267
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236025"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VK429_03155"
     CDS             complement(<1..222)
                     /locus_tag="VK429_03155"
                     /EC_number="1.2.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011019097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HLN90841.1"
                     /translation="MGKIKLLQGNEACAEGAVYAGCTFFAGYPITPSTEVAEYLARQL
                     PQIGGAFLQMEDEIAAMAAVIGGSLAGSKA"
     gene            complement(256..489)
                     /locus_tag="VK429_03160"
     CDS             complement(256..489)
                     /locus_tag="VK429_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012469684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HLN90842.1"
                     /translation="MAKEQAVEKIDATESSKVKISIIPRYCKGCEICVKLCPTQVLGM
                     DVFKVKVVDIDKCTICMACELRCPDFAIFVEKK"
     gene            complement(508..1389)
                     /gene="sucD"
                     /locus_tag="VK429_03165"
     CDS             complement(508..1389)
                     /gene="sucD"
                     /locus_tag="VK429_03165"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019391802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HLN90843.1"
                     /translation="MSIFINKDTKVLVQGITGSVGAFHTKQMLEYGTKIVGGVTPGKS
                     GSKIEGVPVFNSVYDAVKATGANASVVYVPPGFAADAICEAFDAGLDIVICITEGIPI
                     LDMVKAKRFMDGKKTRLVGPNCPGVITPGECKIGIMPGYIHKPGTIGIVSKSGTLTYE
                     AVHQVTTIGLGQSTCIGIGGDPINGTNFIDVLSAFQADPKTEAVIMIGEIGGTAEEEA
                     AAFVKAKMTKPVVGFVAGQTAPKGKRMGHAGAIISGGKGTAAEKIEAFRAAGISVSET
                     PSDMGKTLARRLGLKVN"
     gene            complement(1403..2572)
                     /gene="sucC"
                     /locus_tag="VK429_03170"
     CDS             complement(1403..2572)
                     /gene="sucC"
                     /locus_tag="VK429_03170"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013859073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HLN90844.1"
                     /translation="MNIHEYQAKGVLSKYGVAVPKGKVADNPAEAEAIAEEFGTAVVV
                     KAQIHAGGRGKGGGVKFAKTPAEAREYAKQIIGMTLVTHQTGPQGKKVKRVLIEQAGK
                     IKRELYLGMVIDRGMSRVVMMASTEGGMEIETVAAKTPEKILKEWVDPAVGLMPFQAR
                     KLAFGLGIPGELTGKAVKFMTGLYKAFVDTDCSLAEINPLVLTEDGDIVALDAKMNFD
                     GNGLFRHKDIEVLRDFDEEDPTETEASRFGLSYISLDGDIGCMVNGAGLAMATMDMIK
                     HCGGSPANFLDVGGGASAEQVTNAFRLILSDSKVKAILVNIFGGIMRCDIIAEGVVAA
                     AKTLGLTVPLVVRLEGTNVEKGKEILAASKLNIIAAADMGDAAKKVVLAAAGRAN"
     gene            complement(2632..>3267)
                     /locus_tag="VK429_03175"
     CDS             complement(2632..>3267)
                     /locus_tag="VK429_03175"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012175790.1"
                     /note="Catalyzes the reversible oxidation of malate to
                     oxaloacetate; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HLN90845.1"
                     /translation="VTLKAIARSPGALLIVVSNPLDAMTYVAYKHSKLPANKVVGMAG
                     ILDSARFRAFIAMELGVSVRDVTAFVLGGHGDTMVPSTKYTTVAGIPVEDLIPRDRLA
                     QILERTAKGGAEIVSLLKTGSAYYAPSAAAVQMCESILLDKKMILPCAVLSSGKYDGC
                     DGLFVGLPAKLGAGGVEEVVKFKLSANEAEALKKSAAAVRELCEAVDRLGF"
BASE COUNT          500 a         1146 c          991 g          630 t
ORIGIN      
        1 ggccttggag cccgcgagcg aaccgccgat caccgcggcc atcgccgcga tctcgtcctc
       61 catctgcagg aaggccccgc cgatctgcgg gagttgcctc gccaaatact cggccacctc
      121 ggtcgacggg gtgatcgggt agccggcgaa gaaggtgcac cccgcgtaga cggcgccttc
      181 cgcgcacgcc tcgttcccct ggagcagctt gatcttgccc accgtgtctc tcctttgtcc
      241 ggttcgtgtg gaacgctatt tcttctcgac gaagatcgcg aagtcgggac accgcagctc
      301 gcacgccatg cagatcgtgc acttgtcgat gtccaccacc ttcaccttga acacgtccat
      361 cccgaggacc tgcgtggggc acagcttcac gcagatctcg caccccttgc agtagcgcgg
      421 gatgatgctg atcttgacct tggagctctc ggtcgcatcg atcttctcca cagcctgttc
      481 cttggccatc ggttccggcc cctttcttta gttaactttc agaccgagac ggcgggcgag
      541 cgtcttcccc atgtcggagg gcgtctcgga cacggagatc cccgccgccc tgaacgcctc
      601 gatcttctcc gccgccgtcc ccttgccgcc ggagatgatc gcgcccgcgt ggcccatccg
      661 cttccccttg ggagcggtct ggcccgccac gaagccgacc accggcttgg tcatcttcgc
      721 cttcacgaag gcggccgcct cctcctccgc cgtgccgccg atctcgccga tcatgatgac
      781 cgcctcggtc ttcggatcgg cctggaaggc ggagaggacg tcgatgaaat tcgtcccgtt
      841 gatcgggtcg cccccgatgc cgatgcaggt ggactgcccc aagccgatgg tggtcacctg
      901 gtgcaccgcc tcgtaggtca acgttcccga cttcgagacg atgccgatcg ttcccggctt
      961 gtggatgtag ccgggcatga tcccgatctt gcactccccc ggggtgatga cgcccggaca
     1021 gttcggcccc accagccgcg tcttcttccc gtccatgaac cgcttcgctt tcaccatgtc
     1081 gaggatggga atcccctcgg tgatgcagat gacgatgtcg agccccgcgt cgaacgcctc
     1141 gcagatcgcg tcggccgcaa agccgggagg gacgtagacg accgacgcgt tggccccggt
     1201 cgccttgacc gcgtcgtaga cggagttgaa cacgggcacg ccctcgatct tggagcccga
     1261 cttgccgggg gtcacgccgc cgacgatctt cgtgccgtac tccagcatct gcttcgtgtg
     1321 gaacgccccc acggagccgg tgatcccctg gacgagaacc tttgtgtcct tattgatgaa
     1381 gatgctcacg gacgcgcccc ccttagttcg cccggccggc ggcggccagg acgactttct
     1441 tcgccgcgtc gcccatgtcg gccgcggcaa tgatgttgag cttcgacgca gcgaggatct
     1501 ctttcccctt ctccacgttc gtcccctcga gccggacgac caggggaacc gtgagaccca
     1561 gggtcttcgc cgccgccacc acgccttcgg cgatgatgtc gcaccgcatg atgccgccga
     1621 agatgttcac caggatcgcc ttgaccttcg agtcggaaag gatgagccgg aaggcgttgg
     1681 tcacctgctc ggcgctggcg ccgccgccaa cgtcgaggaa gttcgccggg ctgccgccgc
     1741 aatgcttgat catgtccatc gtggccatcg cgagccccgc gccgttgacc atgcagccga
     1801 tgtcgccgtc gaggctgatg taggagaggc cgaagcggga cgcctcggtc tcggtcgggt
     1861 cctcctcgtc gaagtccctc agcacctcga tgtccttgtg ccggaacagg ccgttgccgt
     1921 cgaagttcat cttggcgtcg agggcgacga tgtcgccgtc ctcggtcagc accagcgggt
     1981 tgatctccgc gagcgagcag tcggtgtcga cgaacgcctt gtagaggccg gtcatgaact
     2041 tgaccgcctt ccccgtcagc tccccgggga tcccgaggcc gaaggcgagc ttgcgcgcct
     2101 ggaacggcat gaggccgacg gccgggtcga cccattcctt gaggatcttc tcgggcgtct
     2161 tcgccgcgac cgtctcgatc tccatcccgc cttcggtgga agccatcatc acgacccggg
     2221 acattccacg atcgatgacc atcccgaggt agagctcccg cttgatcttg ccggcctgct
     2281 cgatcaggac ccgcttcacc ttcttcccct ggggtcccgt ctggtgggtc acgagcgtca
     2341 tcccgatgat ctgcttcgcg tactcccgcg cctcggcggg ggttttcgcg aacttcacgc
     2401 cgccgccctt gccgcgccca ccggcgtgga tctgggcctt cacgacgacg gccgtgccga
     2461 actcctcggc gatcgcctcg gcttccgccg gattgtcagc gaccttcccc ttcgggacgg
     2521 ccacgccgta cttggacaga acgcccttcg cttggtactc gtggatattc atatcctccg
     2581 gctcctcccg gttggtctgt gatcgatccg atccgcggca ggcgagggct tttagaaccc
     2641 gagccggtcg accgcctcgc aaagctccct gaccgccgcc gccgacttct tcaacgcctc
     2701 ggcttcgttc gcggacagct tgaacttgac gacctcctcc accccgccgg cgccgagctt
     2761 tgccggcagg ccgacgaaga gcccgtcgca cccgtcgtac tttccgctcg agaggaccgc
     2821 gcagggaagg atcatctttt tatcgagcag gatcgattcg cacatctgga cggccgcggc
     2881 cgagggggcg tagtacgccg accccgtctt cagcagggag acgatctccg cgccgccctt
     2941 cgccgtccgc tcgaggatct gcgccagccg gtccctgggg atgaggtcct ccaccgggat
     3001 gccggccacg gtggtgtact tggtggaagg gaccatcgtg tcgccgtgac cgcccaggac
     3061 gaaggccgtc acgtcgcgca cggagacgcc cagctccatg gcgatgaagg cccggaaacg
     3121 ggcggagtcg aggatcccgg ccatgcccac aaccttgttg gcgggaagct tgctgtgctt
     3181 gtacgccacg taggtcatgg cgtcgagcgg attcgacacg acgatgagca acgccccggg
     3241 ggatctggcg atcgccttga gggtcac
//
LOCUS       DATGYW010000232         1577 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_289748, whole genome shotgun sequence.
ACCESSION   DATGYW010000232 DATGYW010000000
VERSION     DATGYW010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1577
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289748"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VK429_03180"
     CDS             <1..237
                     /locus_tag="VK429_03180"
                     /inference="COORDINATES: protein motif:HMM:NF013909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HLN90846.1"
                     /translation="GADLYVTGDVKYHQALDAAAGDMPVADIGHASGERWILPEFRRV
                     ISARFPGAVSARVIMDEEPMRAVPAGRRRGGEKP"
     gene            237..962
                     /locus_tag="VK429_03185"
     CDS             237..962
                     /locus_tag="VK429_03185"
                     /inference="COORDINATES: protein motif:HMM:NF014630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc ribbon domain-containing protein"
                     /protein_id="HLN90847.1"
                     /translation="MEQVKILIDLQEVMGQARRLDEEKQKIPLEVADLKSLFEEREAS
                     FLAAEQEFETLKQQRREKEREIEEERDKVERAKSKLMSIKTNKEYYAMLKEIEGTRRT
                     NVAREEELLSLLVRYEEAEKRLAERKADLDEVSARYRERMVDIDARMGTFDDDIGKLD
                     ARRRQVAGKLDPSLVRRFEMIFERRDGLAVVAARNYSCTGCHMNIAPQLFNLLQREDR
                     IHTCPNCNRVVYFEATEIEAASE"
     gene            959..1375
                     /locus_tag="VK429_03190"
     CDS             959..1375
                     /locus_tag="VK429_03190"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: protein motif:HMM:NF024848.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI family protein"
                     /protein_id="HLN90848.1"
                     /translation="MTPVDITVRVDGASRGNPGPSGAGAVIEFGDGREPRELCRYLGE
                     TTNNVAEYRALLLALEEAAGLAAASITVRSDSELLVRQLRGEYKVRAEHLRPLHAEAC
                     RRLRVFPAVRILHVPREENRRADSLANLAIDQHRKG"
     gene            1382..>1577
                     /gene="rnpB"
                     /locus_tag="VK429_03195"
     ncRNA           1382..>1577
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VK429_03195"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
BASE COUNT          317 a          454 c          589 g          217 t
ORIGIN      
        1 ggagcggacc tctacgtcac gggggatgtg aagtaccacc aggcgctgga tgcggcggcg
       61 ggagacatgc cggtcgccga catcgggcac gcttcggggg aacgatggat cctgccggaa
      121 ttccggcggg tgatcagcgc gcggtttccg ggggccgtat cggcccgtgt catcatggac
      181 gaagagccca tgcgggccgt gcccgccggg cgaagaaggg gaggggaaaa gccttgatgg
      241 agcaggtgaa gattctgatc gatctgcagg aggtaatggg tcaggcgcgg cggctcgacg
      301 aggagaagca gaagattccc ctcgaggtgg cggatctgaa gagcctcttc gaagagcgcg
      361 aggcgtcgtt tctggcggcg gagcaggagt tcgagaccct gaagcagcag cgccgcgaga
      421 aggagcggga gatcgaggag gagcgggaca aggtcgaacg ggcgaagtcg aagctcatgt
      481 cgatcaagac gaacaaggag tattacgcca tgctcaagga gatcgagggg acccggcgga
      541 cgaacgtagc ccgcgaagag gaacttctct ccctcctcgt ccggtacgaa gaagcggaaa
      601 agcggctcgc agagcggaag gccgacctcg acgaggtgtc ggcgagatac cgggagcgga
      661 tggtcgacat cgacgcccgg atgggaacct tcgacgacga catcgggaag ctggacgcgc
      721 gcaggcgcca ggtggcgggc aagctggatc cgtccctcgt gcggcggttc gagatgatct
      781 tcgaacggcg ggacggcctg gcggtcgtcg ccgcgaggaa ctactcctgc acggggtgcc
      841 acatgaacat cgccccgcag ctgttcaacc ttctgcagcg ggaggaccgg atccacacct
      901 gccccaactg caaccgtgtc gtgtatttcg aggcgacgga gatcgaggcg gcaagcgagt
      961 gaccccggtc gacatcactg tgcgcgtcga cggcgccagc cgcggtaatc ccgggccctc
     1021 cggggccggc gcggtgatcg agttcgggga tgggcgggag ccaagagagc tctgcagata
     1081 cctcggggag acgacgaaca acgttgcgga ataccgcgcg ctgctcctgg cgctcgaaga
     1141 ggcggccggg ctcgccgccg cctccatcac cgtccgctcc gattcggaac tcctcgtccg
     1201 gcagttgaga ggagagtaca aggtgcgggc ggagcacctc cggcccctcc acgcggaggc
     1261 gtgccgccgg ttgcgcgttt tcccggcggt ccgtatactg catgtaccgc gcgaggagaa
     1321 ccggagggcg gattccctgg cgaatctcgc gatcgatcag caccggaaag gataaatggt
     1381 ccgaggaggc caggcggtcg ccggtctccg cgtcgcaacg gcggggacgg gaggaaagtc
     1441 cgggctccat agggcagggt gccgggtaac acccggtggg ggcgaccccg aggacagcgc
     1501 cacagaaaat acaccgcctc ccgccacggc gggcggtaag ggtgaaatgg tgaggtaaga
     1561 gctcaccgcg cgacggg
//
LOCUS       DATGYW010000233         1579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_15084, whole genome shotgun sequence.
ACCESSION   DATGYW010000233 DATGYW010000000
VERSION     DATGYW010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15084"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            5..1579
                     /locus_tag="VK429_03200"
                     /pseudo
     CDS             5..1579
                     /locus_tag="VK429_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012873823.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
BASE COUNT          306 a          546 c          476 g          251 t
ORIGIN      
        1 atgacactcc tccacggtcc ccggtctggg ggtctccttc ggtagaggcg gttccaccac
       61 cttccctcgc gacctcgtcc actccgacgc ggttctgatc atgggctcca acatggcgga
      121 gtgccatccg gtggccttcc gctggccgct caaagccaaa acggaacacg gggcagtact
      181 gatgcacgtg gacccgcgct tcacgcgcac gtccgctctt tgcgatatcc acgcccccat
      241 ccgggcgggg accgacatcg tgtttctcgg ggcgatcctc aaccacgtaa tccacagcga
      301 ccgctggaac accgacccgt tcttcaggga gtacgtggtc aactacacca atgcggctac
      361 gttgatcgcc gccgaattca aggacaccga agacctggac gggctctact ccgggctttc
      421 ccccgacggg aaggcgtaca gcaacgccac ctgggcctac cagcgcgaaa agccgccggc
      481 gccggcgaca aaggaggcga agaccttcac cgacctcctg ctgcagcgaa tcccggggcg
      541 ccccaagacg gacccgacgc tccggaaccc gcgcaccgtc tttcgaatcc tggagcggca
      601 ctactcccgg tacacgcccg agatggtgga gaagatctgc ggctgcccga aggagaaatt
      661 cctgaaggtg gccgagtccc tgttgaacaa ctccggccgc gaccggacat cgaacatcac
      721 ctacgccgtg gggtggacgc agcacacggt cggcgtgcag atcatccgca ccgccgccgt
      781 cctgcaggct ctgctcggca acatcgggcg acccggggga ggggtgctcg cccttcgcgg
      841 ccacgccacg atccagggct ccaccgacat cgccacgttg taccactccc ttcccgggta
      901 cctgaacatg cccgatgcgc gcaaggcgca cgaatccctg aaggacttca tcctcaccga
      961 ggcggggccg ctttccacca gctattgggg gaactatccc aagttcgccg tctcctattt
     1021 caaggcccag ttcggggacg cggcgacccg ggagaacgac tacgggtacg actaccatcc
     1081 caagatcacc ggcgaccatt cccacatgcc gatgttcgtc gacatggcgg cgggaaagat
     1141 caagggattc ctgttgatgg ggcagaaccc cgccgtgggt gggcagaacg cccgcttcca
     1201 gcgcaaggcc ctcgcgaagc tcgactggat ggtggtccgc gatttcttcg agacggagac
     1261 gtccgccttc tggcgcaact cccccgaaat ccggtcgggg gagctcaagg cctccgagat
     1321 caggaccgag gtgttcttcc tccccgccgc cgcccttgcg gaaatggagg ggaccttcac
     1381 caacacgcag cggctgatcc aggcgcacga caaggcggtc gatccgcccg gcgacgcgcg
     1441 cagcgactcc tggttcagct tcctcctggg caagcggctc aaggagctgt acaaggattc
     1501 gacgaacgac cgcgactggg cgatccggaa cctcttatgg aactacgagc cggaggctgc
     1561 ggaagcggcg gagtggcgg
//
LOCUS       DATGYW010000234         1591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_171340, whole genome shotgun sequence.
ACCESSION   DATGYW010000234 DATGYW010000000
VERSION     DATGYW010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171340"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /locus_tag="VK429_03205"
     CDS             complement(<1..737)
                     /locus_tag="VK429_03205"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HLN90849.1"
                     /translation="MIYFLSFILVLGILIFVHEFGHFIVARKLGVGVTKFSFGFGPKI
                     AGFQRGETEYLLSAVPLGGYVKLVGESEGEEVPPEQLARSFQQKPVWVKMAIVAAGPL
                     GNLVFAVLVFWIVFLGGVPSLTTRIGDIAPDTPAARAGLLKGDVVLRIDGETVATWED
                     LAAKIRAGSAGRPLRITVKRDGSETTIPVAPEMREGRTVFGEKVSEPKIGIVAGQEVT
                     YRKIGPGAAFVRAGQETGKLIYLTVMTV"
     gene            complement(734..>1591)
                     /gene="dxr"
                     /locus_tag="VK429_03210"
     CDS             complement(734..>1591)
                     /gene="dxr"
                     /locus_tag="VK429_03210"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: protein motif:HMM:TIGR00243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HLN90850.1"
                     /translation="PVIAAAEKGKRIALANKELLVMAGKFVTSAARRGKGEILPVDSE
                     HSAVFQAIAGRRREEVLRILLTASGGPFRTHTVARMRSATVAQALGHPTWRMGAKISV
                     DSATLMNKGLEVIEATWLFGLPPSRIDVVIHPQSVVHSMVEFSDGSVMAQMGVPDMRI
                     PIGYAFSHPGRLPLELARLRPHRMEGLIFERPDRKRFPALKLAYAAAETGGSAPAVLS
                     GANEEAVLAFLSGHIGFTDIIRVVDRVLSAWSAPFTARSLQEVLAADAQARRDARNEL
                     SRHRRHQPS"
BASE COUNT          261 a          549 c          521 g          260 t
ORIGIN      
        1 accgtcatca cggtgagata gatgagcttc ccggtctcct gccccgcgcg cacgaaggcc
       61 gcccccggcc cgatcttgcg gtaggtcacc tcctgccccg cgacgattcc gatcttcggt
      121 tcggagacct tctctccgaa aacggtgcgt ccctcccgca tctccggggc cacggggatc
      181 gtcgtttccg acccgtcgcg cttcaccgtg atccgaagcg gccttcccgc gctccccgcg
      241 cggatcttcg ccgcgagatc ctcccaggtg gccaccgtct cgccgtcgat ccggagcacc
      301 acgtcccctt tcaggagccc cgcgcgggcg gccggggtgt ccggcgcgat gtctccgatg
      361 cgggtggtca gcgacggaac gccgccgagg aagacgatcc agaaaacgag gacggcaaag
      421 acgaggttcc ccagcggtcc ggcggccacg atcgccatct tcacccagac cggtttctgc
      481 tggaaggagc gcgccagttg ttcgggtggc acctcttccc cctcgctctc cccgacgagc
      541 ttcacgtacc ctccgagggg gaccgcggag agcaggtatt cggtttctcc ccgctggaac
      601 ccggcgattt tcggcccgaa gccgaacgag aacttcgtga cgccgactcc gagtttccgg
      661 gccacgatga agtggccgaa ctcgtggacg aagatgagaa tgccgaggac gaggatgaac
      721 gagaggaaat agatcacgat ggttggtgtc tcctgtgacg ggatagttcg ttccgcgcat
      781 cgcggcgggc ctgcgcgtcg gctgcgagca cttcctgaag cgatcgggcc gtgaacggcg
      841 ccgaccacgc cgacagcacc cggtcgacaa cgcggatgat gtcggtgaac ccgatgtgtc
      901 cggacaggaa cgccaggacc gcctcctcgt tggcgccgct caagaccgcc ggcgcagagc
      961 cgcccgtttc cgcggcggcg taggcaagct tgagggccgg gaaccgcttc cggtcgggcc
     1021 gctcgaagat caacccttcc attcgatgcg gtcgcagtcg ggccagttcc agggggagcc
     1081 gcccggggtg cgagaaggcg tacccgatgg gaatccgcat gtccgggacc cccatttgcg
     1141 ccatcacgct cccgtcgctg aattccacca tcgagtggac caccgattgg gggtggatca
     1201 ccacgtcgat ccgcgaaggg gggaggccga acagccacgt cgcctcgatc acctcgagcc
     1261 ccttgttcat gagggtggcg gagtccacgg agatcttcgc ccccatccgc cacgtggggt
     1321 gtcccagcgc ctgcgccacc gtggccgacc gcatccgcgc aacggtgtgg gtgcggaacg
     1381 ggccgccgga ggcggtgaga aggatccgga ggacctcttc ccggcgacga cccgcgatcg
     1441 cctggaagac ggcggagtgc tcgctgtcga cggggaggat ctctcccttc ccgcgccgcg
     1501 ccgcggaggt cacgaacttc ccggccatga cgagaagctc cttgttcgcc agggcgatcc
     1561 gcttcccttt ttccgcggcg gcgatgacag g
//
LOCUS       DATGYW010000235         1574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_15264, whole genome shotgun sequence.
ACCESSION   DATGYW010000235 DATGYW010000000
VERSION     DATGYW010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15264"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..664)
                     /locus_tag="VK429_03215"
     CDS             complement(<1..664)
                     /locus_tag="VK429_03215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90851.1"
                     /translation="MSGVARRWVVFPLVGAIAAVMVGCAVVDTGSMTRLQEDMVGLKK
                     EMAALKAASPSAPSAGRADTGDVQSVRKSFADMSSDFDRMKADQLAATTRMDDARAEM
                     QRITARQDAQDRALQEIRGNADRMKEIDKRVAALEERTGKLAPAAVAAPGSESPRDWR
                     SPEEMYEFAVGQVKGGNPKRGRETLSDFATKYPNHKLIPNALYWKGEAFYAEKDYENA
                     ILT"
     gene            complement(666..1220)
                     /gene="pal"
                     /locus_tag="VK429_03220"
     CDS             complement(666..1220)
                     /gene="pal"
                     /locus_tag="VK429_03220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015718923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HLN90852.1"
                     /translation="MKGTRSWKWAAVALCIAALMSVGCAKKQTVKSEGAQAPSAGTPS
                     GVTEAPVKEGPAPVPVASATPPGIAATEERPSQFDDVRFDFDKSEVKEDGRKTCQTVA
                     AFMKKNPRAKLLIEGHCDERGTSEYNLALGERRATAVMTYLVSLGVPKAALSTVSFGE
                     EKPLDPGHDEGAWAKNRRAHFVLK"
     gene            complement(1273..>1574)
                     /locus_tag="VK429_03225"
     CDS             complement(1273..>1574)
                     /locus_tag="VK429_03225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90853.1"
                     /translation="ATSPSWSPAGDRIAYTARSGGRFVIVTVAPDGSDTREVASATDG
                     DCEDPSFSPDGRSLVYTYRKRGYSALKIISSDGRRQRTLVSGLGDAGSPAWSPGR"
BASE COUNT          223 a          556 c          487 g          308 t
ORIGIN      
        1 acgtgaggat ggcgttctcg taatccttct ccgcgtagaa cgcctcgccc ttccagtaga
       61 gggcgttcgg gatcagtttg tggttcgggt atttcgtcgc gaagtcggag agcgtctccc
      121 gtcccctctt cgggttcccg cccttgacct gccccacggc gaactcatac atctcctccg
      181 ggcttctcca atcccgtggg ctttccgatc cgggcgctgc aaccgcagcg ggggcgagct
      241 tgccggtccg ctcctcgagc gccgccacgc gcttgtcgat ctccttcatc cggtcggcgt
      301 tcccccggat ctcctgcaac gcccggtcct gcgcatcctg ccgggcggtg atcctctgca
      361 tctcggcccg ggcgtcgtcc atgcgggtgg tggcggccaa ctggtcggcc ttcatccggt
      421 cgaaatcgct gctcatgtcc gcgaagctct tccgcacgga ctggacatcg cccgtatccg
      481 cgcgccctgc ggagggcgcg gacggggacg ccgccttgag cgccgccatc tccttcttca
      541 gccccaccat atcttcctgg agcctcgtca tggagccggt gtccacgacc gcgcacccca
      601 ccatgacggc ggcgattgcc ccgacgaggg ggaaaacgac ccatctgcgc gccaccccgc
      661 tcacctcatt tcaggacgaa gtgcgcgcgg cggttcttcg cccacgcccc ctcgtcatga
      721 cccggatcca gcggcttttc ctcgccgaag ctgaccgtgg agagcgccgc cttcggaacg
      781 ccgagagaga cgaggtaggt catgacggcc gtcgcccgac gttcccccag cgccaggttg
      841 tactccgagg tgccgcgctc gtcgcaatgc ccttcgatca ggagcttcgc cctggggttc
      901 ttcttcatga aggcggccac ggtctggcac gtcttgcggc cgtcctcttt cacctccgac
      961 ttgtcgaagt cgaaccggac gtcgtcgaac tgcgaaggcc tctcctcggt ggccgcgatc
     1021 cccggcggcg tcgcggaggc gaccggcacg ggagccggcc cctctttcac gggcgcttca
     1081 gtgaccccgg agggggtgcc tgccgaagga gcctgggcgc cttcggattt caccgtctgc
     1141 ttcttggcgc atcccaccga catcaatgcg gcgatgcaca atgccactgc ggcccatttc
     1201 catgaacgtg tacccttcat tctctttccc tcctgttgat ggatgcattc gggcgcgtga
     1261 gcgccctgca agctaccgtc cgggtgacca ggcgggtgaa ccggcgtctc cgaggccgga
     1321 aacgagggtg cgttgtctcc ggccgtccga tgagatgatt ttcagggcag aatagcccct
     1381 tttcctgtat gtgtaaacca gggagcgacc gtccggggaa aaagacgggt cttcgcagtc
     1441 gccgtccgtc gcggacgcga cttcccgggt gtcggatccg tcgggcgcca ccgtcacgat
     1501 gacgaaccgc cctccggacc tggcggtgta ggcgatccgg tcccccgcgg gggaccagga
     1561 cggcgacgtg gcgt
//
LOCUS       DATGYW010000236         3009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_290035, whole genome shotgun sequence.
ACCESSION   DATGYW010000236 DATGYW010000000
VERSION     DATGYW010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3009
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_290035"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1275
                     /locus_tag="VK429_03230"
     CDS             <1..1275
                     /locus_tag="VK429_03230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013258930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HLN90854.1"
                     /translation="AVAAARVDPPDLVLLDLGLPGMSGIEAIPVFRAIAPEILIVVIT
                     AYEDVKSVVSAMKGGAYDYVVKPLDIDTLEMCIGNALESIRLKKEVQALQERYLRENL
                     PCFIGESNTIRDVMEFVGLLARSPDTPVLILGETGTGKELIASAIHYRSPNFRGPLIS
                     VNCAAIPRELIESELFGYEKGAFSGASAAGKKGMVEQAEGGTLFLDEIGDLTPEAQAK
                     LLRFLEEGEYYRVGGTRKLTVRARVVSATNKNLRELIAKGLFREDLYYRLAVARVELP
                     SLTERQDDIIPIALHFLLEFNRKFGRSFSGISRDAREALMQYRWKGNVRELRNFVERG
                     VLVGRGPELTRRDLDLGEENVSVDRRPAPEEILHPLLPPGGVDLVEAHESLDRHFFGE
                     ALRFTEGNETRAAQLLRINYSTFRYRRRKLGI"
     gene            1491..1715
                     /locus_tag="VK429_03235"
     CDS             1491..1715
                     /locus_tag="VK429_03235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017316885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HLN90855.1"
                     /translation="MATHSYTVLVEKENGGYRAHCPALPGCRSYGDTKKEAVNNIKLS
                     ISYRLETLIAKGKPIPKDGDLASPAQQRAQ"
     gene            1729..2151
                     /locus_tag="VK429_03240"
     CDS             1729..2151
                     /locus_tag="VK429_03240"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLN90856.1"
                     /translation="MRNLYKELGIESILLIEDDPWSRDSLKTFFRIVECRMESAENAT
                     EAIATVSRNRFDLILCEYQLPGMNGLDLLKMLGSSDHGAVKFLFTSYPVDKLVEGAVR
                     SGIHEVIRKPFTMETLEESLMRYFPRARQRDRDPVGAN"
     gene            complement(2158..2730)
                     /locus_tag="VK429_03245"
     CDS             complement(2158..2730)
                     /locus_tag="VK429_03245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012530547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HLN90857.1"
                     /translation="MAPNLTLPKALPRAFYDRDTVAVARDLLGKHLIHVSRGVERIGR
                     IVEVEAYVGPHDLASHSSRGRTARTRVMFGPPGHAYVYLVYGMHCCMNIVTEHEGHAS
                     AVLVRAIEPVRNVEGSTRGPGRLCKAMHIDRRRNGHDLISDEFYIAEPPVSEPLSIVR
                     RPRVGVGYAGHWARRLLRFYIRGNPFVSEP"
     gene            complement(2737..>3009)
                     /locus_tag="VK429_03250"
     CDS             complement(2737..>3009)
                     /locus_tag="VK429_03250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012829464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLN90858.1"
                     /translation="FWGWNRAWLDPGFLAWNIEDRLPVITVPVLVVQGTDDPYGTLRQ
                     VEAIERGCGGPVRRCILEGCGHTPHRERRERTLSTMAAFVRGMEKR"
BASE COUNT          604 a          908 c          944 g          553 t
ORIGIN      
        1 gccgtcgccg ccgcccgggt cgatccaccc gatctcgtcc tcctcgacct cgggcttccg
       61 ggaatgagcg ggatcgaggc catcccggtg ttccgcgcca tcgccccgga gatcctgatc
      121 gtcgtcatca ctgcctacga ggatgtgaag agcgtcgtgt ccgcgatgaa gggcggcgcc
      181 tacgactacg tggtgaagcc gctcgacatc gatacgctgg agatgtgcat cgggaacgcc
      241 ctcgaatcga tccggctgaa aaaagaggtg caggccctcc aggagcggta tctccgggaa
      301 aatctcccat gcttcatcgg ggagagcaac acgatcaggg atgtgatgga gttcgtggga
      361 ctcctcgccc ggagcccgga caccccggtc ctcatcctcg gggaaacggg aaccgggaag
      421 gagctgatcg cgagcgcgat ccactaccgg agcccgaatt tccgcggtcc cctgatcagc
      481 gtgaattgcg ccgccatccc gagagagctg atcgagagcg agctgttcgg gtacgagaag
      541 ggggccttca gcggggcgag cgccgccggg aagaaaggga tggtggaaca ggcggaaggg
      601 gggaccctgt tcctcgacga gatcggcgat ctgaccccgg aagcgcaggc caagctcctc
      661 cgcttcctcg aagaggggga atattaccgt gtggggggaa cgaggaagct cacggtccgc
      721 gcgcgggtcg tgtccgccac gaacaagaat ctccgggagt tgatcgcgaa gggccttttc
      781 cgggaggacc tctactatcg gctggccgtc gcacgggtgg agcttccttc gctgacggag
      841 cggcaggacg atatcatccc gatcgccttg cactttctac tcgaattcaa ccggaagttc
      901 ggcagatcgt tcagcgggat ctcccgggat gcccgggaag cgctgatgca gtatcgctgg
      961 aaagggaacg tccgggagtt gaggaacttc gtggaacggg gcgtcctcgt tggacggggg
     1021 ccggagctga cgcggaggga tctcgacctg ggggaagaaa acgtctccgt ggaccggcgc
     1081 cccgccccag aggagatcct ccaccccctg cttcctcccg ggggcgtcga ccttgtcgaa
     1141 gcgcacgaat cgttggaccg gcattttttc ggggaagcgc ttcgctttac cgaggggaac
     1201 gagacccggg cggcgcagct cctccggatc aattactcca cgttccggta ccggagaaga
     1261 aagctgggga tttgatactg cccggaactg gaaaaatttc cgtatagcga aatcgatctg
     1321 caatttttta tatttttttt gggttatccc ccccccattt cgaagggggt atttcggtaa
     1381 tgcactgatt tcgttgactt ctgcttcctc ctccccttgg cacactccct gcgaatgatt
     1441 cctgtacatt cgaaatcctc gtggaaggtg cggggaaaaa ggaggagaag atggcgactc
     1501 acagttacac cgtcctggtg gagaaggaaa acgggggata ccgcgcgcat tgccccgcgt
     1561 tgcccgggtg ccgctcctat ggagacacca agaaggaggc ggtgaacaac atcaagctct
     1621 ccatttctta tcgcctggaa acccttatcg ccaaagggaa accgattccg aaggacggag
     1681 atctcgcaag cccggcgcag cagcgcgcac agtaaaagca ccgttgtctt gaggaacctc
     1741 tacaaggaac tgggcatcga gagcatcctc ctgatcgagg atgacccatg gagcagggat
     1801 tccctgaaga cgtttttccg gatcgtggaa tgccgcatgg agtccgccga gaacgcaacg
     1861 gaggccattg cgaccgtatc acggaaccgt ttcgacctga tcctctgtga ataccagctt
     1921 ccggggatga acggcctgga cttattgaaa atgttgggga gtagtgatca cggggccgtg
     1981 aaattcctgt tcacgtcgta tccggtcgat aaactggtcg agggtgccgt tcggtccggg
     2041 attcacgaag tcatccgaaa accgttcacc atggaaaccc tggaggaatc gttgatgcga
     2101 tactttcccc gcgcgcgcca gagagaccgc gatcccgttg gcgcgaattg acgggcgtca
     2161 cggttccgag acaaacggat tcccccggat gtagaaccgc aggagcctcc tcgcccaatg
     2221 ccccgcgtag cccacgccga cgcggggtct cctgacgatg gagagaggct cggacacggg
     2281 cggctccgcg atataaaatt cgtcgctaat caggtcgtgc ccgttgcgtc gccggtcgat
     2341 gtgcatcgcc ttgcacaggc ggccggggcc ccgggtggag ccttcgacgt tcctcaccgg
     2401 ctcgatggcc cgcaccagca cggcggatgc gtgtccctcg tgctcggtca cgatgttcat
     2461 gcagcaatgc atgccgtaca ccaggtaaac gtaggcgtgg cccggcgggc cgaacatgac
     2521 ccgcgtccgg gcggtacgtc cccgggaaga atgggacgcg aggtcgtgcg ggcccacgta
     2581 cgcctcgact tccacgatcc ggccgatccg ctcaaccccg cgcgacacat gaatcaggtg
     2641 tttccccaac agatccctgg cgaccgcgac ggtgtcgcga tcgtaaaatg cccgcggcaa
     2701 cgccttcggg agggtgagat tcggcgccat acgacgctat ctcttttcca tcccgcgaac
     2761 gaacgccgcc atcgttgaaa gcgtccgttc gcgccgttca cgatgcgggg tgtggccgca
     2821 cccctcgagg atgcagcgcc ggaccggccc gccgcatccc cgctcgatcg cttcgacctg
     2881 gcgaagggtt ccgtacggat cgtcggttcc ctgtaccacg agcacgggga ccgtaatgac
     2941 gggcaggcga tcctcgatgt tccatgcgag aaaccccgga tccagccagg cccggttcca
     3001 tccccagaa
//
LOCUS       DATGYW010000237         2339 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_396969, whole genome shotgun sequence.
ACCESSION   DATGYW010000237 DATGYW010000000
VERSION     DATGYW010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396969"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            200..811
                     /gene="lexA"
                     /locus_tag="VK429_03255"
     CDS             200..811
                     /gene="lexA"
                     /locus_tag="VK429_03255"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: protein motif:HMM:TIGR00498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HLN90859.1"
                     /translation="MVTPLTPTQRRVLDFLREFVERHRFAPTAGEIASRFGIAVKNGF
                     YYLELLERKGYIRRKRHHPRRIEFVGENLFRSAVRIPVLGRVPAGGPREAIEEVEGEL
                     LLDPDLVGEGEVFSLRVKGDSMTGAHICDGDHVLVRSQARAEEGEIVVAVIDGEATVK
                     RFRRWKGKVRLEPANPAYPPIVVSVGAPSFRIAGKVVGVYRKL"
     gene            821..1513
                     /locus_tag="VK429_03260"
     CDS             821..1513
                     /locus_tag="VK429_03260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90860.1"
                     /translation="MSSLDIERASSLCLSPPPGKMAGIFGDGACGLALRALAVPLLRA
                     EAVVAVDGANRFDPYEISKAARARGEDGREALSRIRVSRAFTCHQMEALLSRRLPEAL
                     SRFDARLALVLGLPETFADADVPYTEACRVFRNCLSALRTLARGGTRIVLVGKGEPPA
                     SVGHHAVGPVPADRAGFFRYLVRTADPVLLLQRAEDGLTWELRRREVHLAALPEGASA
                     GVPAARLPGGGS"
     gene            1516..1809
                     /locus_tag="VK429_03265"
     CDS             1516..1809
                     /locus_tag="VK429_03265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014960732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90861.1"
                     /translation="MGRTVLPFTQELYREEESWRGFRRALRREDRKLFDALFAAARYH
                     TAACTCAERVVPFDAILMSILVEERRSVRELSRRLEELERRLASMPRECPDGR"
     gene            1806..>2339
                     /locus_tag="VK429_03270"
     CDS             1806..>2339
                     /locus_tag="VK429_03270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90862.1"
                     /translation="MNGWVFDIAGERGGMTVWFRTAAGETIALFAPFRPSFVLAGSRL
                     KEPALRAAATRWKCGLVRGEGIDFLSGRTIPAWSFTVPGPALLGPAVRKAEKAFGPEA
                     LCNADIAPEQQFSCATGLYPLSRAAVDCDGDGTIRSARVLDSPWDVDAPHPSFSIALL
                     RMEGTGHPAHRRVRPLEL"
BASE COUNT          311 a          814 c          834 g          380 t
ORIGIN      
        1 aggagggtcc gtccggcgga gtcgccgcag gaggggggcg cagtgaggta aagcgcagcc
       61 gtgcaggttc accgcacggc gagccacgaa cggagtcccc ctccgaggcg gcgcagccga
      121 agggtgagtc ccggaggcgc aacgccttcc gcatctcagg tatctttacg ttgccgtata
      181 tgtatagtag tatacataca tggtcactcc cctgacaccg acgcagcggc gggtcctcga
      241 cttcctccgg gagttcgtgg agcgccaccg gttcgccccg accgccgggg aaatcgcgag
      301 ccgtttcggg atcgcggtga agaacggctt ctactacctg gagcttctgg agcgcaaggg
      361 gtacatccgg cgcaagcgcc accatccgcg ccggatcgag ttcgtggggg agaacctctt
      421 ccggtccgcc gtgcgcatcc cggtcctggg ccgggttccc gccggggggc cgcgcgaggc
      481 gatcgaggag gtcgaggggg agcttctcct cgatcccgac ctggtggggg agggcgaggt
      541 cttctccctg cgcgtcaagg gggacagcat gacgggggcc cacatctgcg acggggatca
      601 cgtcctcgtc cggtcgcagg cccgcgcgga ggagggagag atcgtcgtcg ccgtgatcga
      661 cggcgaggcc accgtcaaac ggttccgtcg atggaaaggg aaggtgcgac tcgagcccgc
      721 caacccggcc tatcccccca tcgtcgtctc cgtcggcgcc ccctcgttcc gcatcgccgg
      781 aaaagtcgtc ggcgtctacc ggaaattgta ggagcctccc gtgtcctcgc tcgacatcga
      841 gcgcgcctcc tccctctgcc tttccccgcc tccggggaag atggccggga tcttcgggga
      901 cggcgcgtgc gggctcgcgc tccgggcgct ggccgtcccg cttcttcgcg ccgaggcggt
      961 ggtggccgtc gacggcgcga accggttcga cccgtacgag atctccaagg cggcccgggc
     1021 gaggggggag gacggccggg aggccctgtc ccgcatccgc gtctcccggg cgttcacctg
     1081 ccaccagatg gaagcgctcc tgtcccgccg gctgcccgag gcgctctccc ggttcgacgc
     1141 ccggctcgcc ctcgtcctcg gtcttcccga aacgttcgcc gacgccgacg tgccgtacac
     1201 ggaggcgtgc cgcgtcttcc ggaactgtct ttccgcgctg cgaacgctcg cgcgcggggg
     1261 gacgcggatc gtcctcgtcg ggaaagggga accgccggct tcggtcggcc atcacgccgt
     1321 cgggcccgtc cctgccgacc gggcggggtt cttccgctac ctcgtccgaa cggccgatcc
     1381 cgtccttctc ctgcaacggg cggaggacgg cttgacgtgg gaactgcgcc gtcgcgaggt
     1441 gcatctcgcc gctctgccgg agggagcctc tgccggcgtc ccggcggcgc ggcttcccgg
     1501 gggaggatcc tgacgatggg gcggaccgtc cttcccttca cccaggagct ctaccgcgag
     1561 gaggagtcgt ggcggggctt tcgacgcgcc ttgcgccggg aggaccgcaa gctcttcgac
     1621 gcgctgttcg cggcggcccg ctaccacacc gcggcgtgca cctgcgcgga gagggtcgtt
     1681 ccattcgatg cgatcctgat gagcatcctc gtcgaggagc gccggtcggt gcgcgagctg
     1741 tcgagacggc tcgaggagct cgaacggcgg ctggcttcga tgccgcggga atgtcccgac
     1801 gggagatgaa cggatgggtg ttcgacatcg ccggggaacg gggcgggatg acggtctggt
     1861 tccgcaccgc ggccggggag acgatcgcgc tcttcgcgcc gtttcgtccc tcgttcgtcc
     1921 tcgcggggag ccgcctgaaa gagcctgccc tccgcgccgc cgccacgcgg tggaagtgcg
     1981 gcctcgtgcg gggggagggg atcgatttcc tctctggcag gacgatcccg gcgtggtcgt
     2041 tcaccgtgcc ggggccggcc ctcctgggac ctgcggtccg caaggcggaa aaggcgttcg
     2101 ggccggaggc gctctgcaac gccgacatcg cccccgagca gcaattctcc tgcgcgaccg
     2161 gcctgtaccc cctgtcgcgc gccgcggtcg attgcgacgg cgacgggacg atccgctccg
     2221 cccgcgttct cgattccccg tgggacgtgg acgcgccgca tccctccttt tcgatcgcgc
     2281 tcctccggat ggaagggacg ggccacccgg cgcatcggcg cgtccgcccg ctcgagctc
//
LOCUS       DATGYW010000238         2392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_15350, whole genome shotgun sequence.
ACCESSION   DATGYW010000238 DATGYW010000000
VERSION     DATGYW010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15350"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            19..669
                     /locus_tag="VK429_03275"
     CDS             19..669
                     /locus_tag="VK429_03275"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015744853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019136 - deoxynucleoside kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HLN90863.1"
                     /translation="MTEPKIPRYIAIEGPIGVGKSSLAKILAQKYASRLVKEEVAGNP
                     FLERFYENPRKFAFQTQLFFLLSRYRQQRELAQGDLFEGGLVCDYILAKDKIFALINL
                     EDDEISLYESIYRLLVSTLPKPDLVVYLQARPEVLLSRVRKRGIAYERNISLDYLRTL
                     SDAYNEYFFHYNETPLLVVNTSEIDFVESPRDLEHLVREVKSVKRGTQHYIPLGSG"
     gene            818..1618
                     /gene="panB"
                     /locus_tag="VK429_03280"
     CDS             818..1618
                     /gene="panB"
                     /locus_tag="VK429_03280"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020676123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HLN90864.1"
                     /translation="MAVRKTNILDLGRMKAEGAKIVMITAYDALFARIFDDVGVDVIL
                     VGDSLGQVVLGHSSTLNVTMEDMVRHTEAAAQGRKRAFLIADMPFLSYQTGPSDAIRN
                     AGRLLQAGAEAVKLEGGRNAAETIRAVASADIPVMGHIGLTPQSVHRMGGYRVQGKTD
                     PQRERLLDDAAAVQEAGAFSIVLEGMPAALAEEITRTLSIPTIGIGAGVGCDGQVLVM
                     HDLLGLFDEFRPKFVRRFGELRKPVEDAVGAYAAAVRDGSFPGKEHSF"
     gene            1618..>2392
                     /gene="panC"
                     /locus_tag="VK429_03285"
     CDS             1618..>2392
                     /gene="panC"
                     /locus_tag="VK429_03285"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012098618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HLN90865.1"
                     /translation="MERLRTPAAMRTWADVRRLEGARIGLVPTMGYLHEGHVSLVRIA
                     KARGCGAVAASIFVNPTQFGPGEDYEKYPRDEAQDLAMLDAAGVDAVYLPGVKDMYPE
                     GHQTFVEVTGASKGLCGAARPGHFRGVATVVAKLFLASKPHVAVFGEKDYQQLAVIRA
                     MNRDLDFGIEIVGAPIVREEDGLAKSSRNVYLKGDDRVAARCLSRGLFRAKELFGKGE
                     RDVRILVAAAGAAIEGEPRAKPEYVEGRDPVTLAPLAGRV"
BASE COUNT          409 a          718 c          875 g          390 t
ORIGIN      
        1 gcatacaatt gaccgaacat gacggaaccg aagatccccc gctacatcgc gatcgaaggc
       61 ccgatcggcg tcgggaagtc gtccctggcg aagatcctcg cccagaaata cgcctcccgc
      121 ctcgtcaagg aggaggtggc ggggaacccg ttcctcgagc gtttctatga gaacccccgg
      181 aagttcgcct tccagaccca gctcttcttc ctcctgtcgc gctatcggca gcaacgggag
      241 ctggcccagg gggacctctt cgagggcggc ctggtgtgcg actacatcct cgccaaggac
      301 aagatcttcg ccctcatcaa cctcgaggac gacgagatct ccctctacga gtcgatctac
      361 aggctgctcg tgtccaccct tcccaagccg gacctggtcg tctacctcca ggcgcgcccc
      421 gaggtcctgc tgtccagggt ccgcaagcgg gggatcgcgt acgaacgaaa tatctccctt
      481 gactacctcc gcacgctgag cgatgcttat aatgaatact ttttccacta taacgagacc
      541 ccgctcctgg tggtcaacac gagcgagatc gactttgtgg aaagcccccg cgaccttgaa
      601 catctcgtga gagaagtcaa gagtgtgaaa cgcgggacgc agcactacat accgctggga
      661 tccgggtagc tcgggccgag acgggatcgt agaagggagc ggcggcggtg cgggagggtt
      721 ccgccccgac gtcgcccagt gcgtgtcatc acgcggcctt ccggatccgg ttccgggagg
      781 ccttaatttt ttgggcagga acaagggggc gggcgcgatg gcggtgcgca aaaccaatat
      841 cctcgacctt gggcggatga aggccgaggg ggcgaaaatc gtgatgatca cggcgtacga
      901 cgccctgttc gcccgcatct tcgacgacgt cggggtggac gtgatcctcg ttggcgactc
      961 gctggggcag gtggtgctcg gccactccag caccctgaac gtcacgatgg aggacatggt
     1021 ccggcatacg gaggcggcgg cgcaagggcg caagcgcgcc ttcctcattg cggacatgcc
     1081 gttcctgtcg taccagaccg gcccgtcgga cgccatccgc aacgccgggc gtctgctcca
     1141 ggcgggggcg gaagcggtga agctggaggg ggggcgcaac gccgcggaaa cgatccgggc
     1201 ggtcgcgtcg gcggacatcc ccgtgatggg tcacatcggg ctcactcccc agtcggtcca
     1261 ccggatgggc ggctatcggg ttcaggggaa gaccgacccg cagcgggagc ggctgctgga
     1321 cgacgcggcg gcggtgcagg aggcgggggc tttttcgatt gtgctcgagg ggatgccggc
     1381 cgcgctcgcc gaggagatca cccggacgct ttcgatcccg acgatcggga tcggcgcggg
     1441 agtcggctgc gacggacagg tgctggtgat gcacgacctg ctggggctgt tcgacgagtt
     1501 ccggccgaag ttcgtgaggc gcttcggcga gcttcgaaag ccggtggagg acgcggtcgg
     1561 ggcgtacgcc gccgcggtgc gcgacgggtc gttccccggg aaggagcact ccttctgatg
     1621 gagcggcttc gcacgccagc ggcgatgcgg acgtgggccg acgtccgccg gctggaaggg
     1681 gcccggatcg gcctggtgcc gacgatgggg tacctgcacg aggggcacgt gagcctggtg
     1741 cggatcgcca aggcgcgagg atgcggcgcg gtggcggcgt cgatcttcgt caacccgacg
     1801 cagttcgggc cgggagagga ttacgaaaag tatccccggg atgaagcgca ggacctggcg
     1861 atgctcgatg cggcgggtgt cgatgcagtg tacctccccg gcgtgaagga catgtatccg
     1921 gaggggcacc agacgttcgt cgaggtgacc ggcgcttcga aggggctgtg cggggcggcg
     1981 cgccccggcc atttccgggg ggtcgccacg gtggtggcga agctgttcct cgcttcgaag
     2041 ccccatgtgg cggtcttcgg cgagaaggat taccagcagc tggcggtgat ccgcgcgatg
     2101 aaccgggacc tcgacttcgg catcgagatc gtcggggcgc cgatcgtccg ggaagaggac
     2161 gggttggcga agagctcgcg caacgtctat ttgaagggcg acgaccgggt cgcggcccgg
     2221 tgcctgtcgc gggggctctt ccgcgcgaag gagctgttcg ggaagggcga gcgggacgtg
     2281 aggatcctgg tcgcggcggc cggggcggcg atcgaagggg agccgcgggc gaaaccggaa
     2341 tacgtggaag gtcgggatcc ggtcacgctc gccccgctgg cgggccgggt cg
//
LOCUS       DATGYW010000239         3100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_396989, whole genome shotgun sequence.
ACCESSION   DATGYW010000239 DATGYW010000000
VERSION     DATGYW010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3100
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396989"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..322
                     /locus_tag="VK429_03290"
     CDS             <1..322
                     /locus_tag="VK429_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011464621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="BBE domain-containing protein"
                     /protein_id="HLN90866.1"
                     /translation="ATMRPAADSSAYPHRNTMYVCNVHGRWDTLAEDRKGMEWARGFF
                     RDTAPHATAGVYVNFLTDDEPDQIKAAYGPNYQMLAEIKKKYDPQNLFRINQNIRPGI
                     RPAA"
     gene            complement(579..899)
                     /locus_tag="VK429_03295"
     CDS             complement(579..899)
                     /locus_tag="VK429_03295"
                     /inference="COORDINATES: protein motif:HMM:NF024546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRL domain-containing protein"
                     /protein_id="HLN90867.1"
                     /translation="MILRNSVNGGRSIVALLVVALLSAGCMKLYANYRSTMDIHVDNT
                     FLGKKEGRASRHTVLWLVSWGDAGVAAAAKNGGLTTMNHMDSEIFQVLYGLYTQETVV
                     VYGD"
     gene            complement(896..1297)
                     /locus_tag="VK429_03300"
     CDS             complement(896..1297)
                     /locus_tag="VK429_03300"
                     /inference="COORDINATES: protein motif:HMM:NF024546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRL domain-containing protein"
                     /protein_id="HLN90868.1"
                     /translation="MLGKRLAALVFAPVLLLSGCGSLGTLYTYRSFGLLYTHTVRPLS
                     RHRGAVDVAPTGAASGNIKQIQIQYLSILWDDNAIGEIAKKGGIETIHYADLETRSYI
                     LGLWTRHTVHVHGTAANPPAAMPPTCADAGM"
     gene            complement(1311..1607)
                     /locus_tag="VK429_03305"
     CDS             complement(1311..1607)
                     /locus_tag="VK429_03305"
                     /inference="COORDINATES: protein motif:HMM:NF024546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRL-like family protein"
                     /protein_id="HLN90869.1"
                     /translation="MNSRRPAFPILAVAFLLAGCLYSNVVAPLSTDMNKTTMGKKEGR
                     ASTQSVLWLVSWGDAGVAAAAKNGGLTTVNHMDVEIQNILFGLYTKETTIVYGD"
     gene            1823..2407
                     /locus_tag="VK429_03310"
     CDS             1823..2407
                     /locus_tag="VK429_03310"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011984517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLN90870.1"
                     /translation="MGRKLFEEAYLSLPPWDIGRPQGEIIRLAEEGEIRGVVLDAGCG
                     TGENALFLSDLGYEVTGIDAAGAAIRKAKQKSMGRKVPAVFLEWDALEIYGLGKRFDT
                     VIDCGLFHVFSDEERPLYVEGLSMVLVPGGTFRMLCFSEMEPGDWGPRRVTQREIREA
                     FDRGWRVDSIREARFETNLGPEGCRAWLSSITRE"
     gene            2380..3033
                     /locus_tag="VK429_03315"
     CDS             2380..3033
                     /locus_tag="VK429_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008478625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022841 - potassium ion leak channel
                     activity [Evidence IEA];
                     GO_process: GO:0071805 - potassium ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM175 family protein"
                     /protein_id="HLN90871.1"
                     /translation="MALVDHTGMKDEEKDTGRIEAFSDGVFAIAITLLALELKIPHTV
                     EGGEEALVRALVSQWPSYLSFVTSFCTILIMWGNHHEMFRHVRRVNTGFMVSNGFLLM
                     LVTVVPFTTALISDYLNKVGAVVACAVYGGVFVLISIAYNLLWYAAAKDRALLRSGVP
                     EQVIRKFTRNYRIGFPLYLLATVAAFVSPFVTIGICTALWVFWAFTMRRGEAGIHSS"
BASE COUNT          624 a          860 c          978 g          638 t
ORIGIN      
        1 agcgaccatg cggcctgccg ccgactcctc ggcgtacccc catcgcaaca cgatgtatgt
       61 atgcaacgtc cacggtcgct gggataccct ggcggaagac cggaaaggca tggagtgggc
      121 gcggggattc ttccgcgaca cggcaccgca cgccacggcc ggggtgtacg tcaatttcct
      181 taccgacgac gagccggacc agatcaaggc ggcctatggt ccgaactacc aaatgctggc
      241 ggagatcaag aaaaaatacg acccgcagaa cctgttccgg atcaatcaga atatccgtcc
      301 tggtatccgt cctgctgcat aaggaggtct ggactcaacg gagtttagag attcatccca
      361 ccttgaatca agcggcactc caaagaggag caaggacgga tatccacgcg gatggacacg
      421 aagttaaaga ggaacccgta tagaacgtaa accccgtgca gacaaccggc ttttcggggt
      481 gaaaaggggg taattcaggg acgctgttga cgggggaaat ccattgatcg gttggaaagg
      541 attcagaggg gccggccacg ttccggcgac cccggccgtc agtccccgta aacgacgacg
      601 gtttcctgcg tgtagaggcc gtagaggacc tggaaaattt ccgagtccat gtggttcatc
      661 gtggtgagac cgccgttctt tgccgcggcg gcaacccccg cgtctcccca ggagacaagc
      721 cagagcaccg tgtgcctcga ggcccgcccc tcctttttcc cgaggaatgt gttgtccacg
      781 tgaatatcca tggtggacct gtagttcgcg tacagcttca tgcaccccgc tgaaaggagc
      841 gccacgacga ggagcgccac gatggatctt cccccgttca cggagttcct caggatcaca
      901 ttcccgcgtc ggcgcaggtt ggtggcattg ccgccggcgg gttcgcagcc gttccgtgga
      961 cgtgaaccgt gtggcgtgtc cagagaccca agatgtagct tctcgtctcc aggtcggcgt
     1021 aatggatcgt ttcgatcccc ccctttttgg cgatctcgcc gatggcgttg tcgtcccata
     1081 ggatcgagag atattggatc tggatctgtt taatattgcc gctcgcggca cccgttggag
     1141 caacgtccac ggcgccccga tgacgggaca ggggtcgtac cgtgtgggtg tacaggaggc
     1201 cgaagcttcg ataggtgtaa agagtcccca ggctgccaca gccggagagg agcaggaccg
     1261 gggcaaagac aagggcggcg aggcgttttc ctagcaccgc ggaatcccgg tcaatcgccg
     1321 taaacgatgg tggtctcttt cgtgtaaaga ccgaaaagga tgttctggat ttccacgtcc
     1381 atgtggttga ccgtggtcag gccgccgttc ttcgctgcgg cggcaacccc cgcgtctccc
     1441 caggagacga gccagagcac cgattgagtg gaagcccggc cctctttctt tcccatggtg
     1501 gttttgttca tgtcggtgct caggggggcc accacgttcg aataaaggca ccccgccaga
     1561 agaaacgcca ccgcgaggat gggaaatgcc ggcctcctgg aattcacccc ttctcctttt
     1621 cgacgatcgt aatgccgcgg ttttcctgta tgcccgcgtc ccgttacgaa tgatcatacg
     1681 tttccggcat tgccttgcgc aatgtctgtc ccagggaggt gcaggagagg cggaggctgc
     1741 aggtggaggg gtatcaggaa gcaggtcaaa cgaaccccct tttccagcat caaaagcatg
     1801 gagaacctgt ggggggttcg agatggggag gaaattgttc gaggaggcat acttgtccct
     1861 gcccccctgg gacatcggac ggccgcaagg ggaaatcatc cgacttgcgg aggaggggga
     1921 gatccgggga gtcgttctgg acgccgggtg cgggacgggc gagaacgctc tttttctttc
     1981 ggaccttggg tacgaagtca ccggtatcga cgctgccggg gcggccatcc gtaaggcaaa
     2041 gcaaaaatcc atggggagaa aggtgcccgc cgtcttcctc gaatgggatg ccttggaaat
     2101 ttacggactc gggaagcgat tcgatacggt catcgattgc gggttgttcc acgtcttctc
     2161 cgacgaggag cgtcccttgt atgtcgaggg gctgagtatg gtcctggttc ccggcggaac
     2221 attccggatg ctctgcttca gcgagatgga gccgggggac tggggaccgc gtcgggtcac
     2281 gcagcgagag atccgggagg ccttcgacag aggctggagg gtggactcga tccgggaagc
     2341 gcgtttcgag acgaacctgg ggccggaagg gtgcagggcg tggctctcgt cgatcacacg
     2401 ggaatgaaag acgaagaaaa agacacgggt cgcatcgagg cgttcagcga tggggtgttc
     2461 gccatcgcga tcactctgct ggcgctcgag ttgaagatcc cgcacacggt ggagggcggg
     2521 gaggaagcgc ttgtccgtgc tttggtcagc cagtggcctt cctatctatc cttcgtgacg
     2581 agtttctgca cgatcctgat tatgtggggg aaccaccacg agatgttccg tcacgtccgc
     2641 agggtcaata ccggcttcat ggtgtcaaat ggatttctgc tcatgctggt caccgtcgtt
     2701 cccttcacga cggcgttgat ctcggattat ctgaacaagg tgggcgccgt ggtggcgtgt
     2761 gcggtgtacg ggggcgtttt cgtcctcatc agcatcgctt acaaccttct gtggtacgcg
     2821 gcggcgaagg accgcgctct ccttcggagc ggcgttccgg aacaggtcat ccgcaagttt
     2881 acgagaaact accggatcgg ctttccgctc tatctgctgg caaccgtcgc tgcatttgtc
     2941 agcccctttg tcacaatcgg catctgcacg gcattgtggg tgttttgggc ctttacgatg
     3001 agacggggag aagccgggat ccactcctcc taagacaagg tgctcctcgt gacctgcccc
     3061 cgaggaatat gaccaccggc actatggaaa ttcctccgaa
//
LOCUS       DATGYW010000240         4316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_236435, whole genome shotgun sequence.
ACCESSION   DATGYW010000240 DATGYW010000000
VERSION     DATGYW010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4316
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236435"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1885)
                     /locus_tag="VK429_03320"
     CDS             complement(<1..1885)
                     /locus_tag="VK429_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HLN90872.1"
                     /translation="MTDKRVEESGQEIRGLEIGVSEEALKEAEKFVEAEEGAASHFKG
                     KVQVFLIAVGVLMSLFHLYAAYGIVQAQVLRAIHVGFVLFLTFFLFPIAPRFRDRIMA
                     FDVVLALLSVAAIAYMLVDFDNFIYRAVTPTRWDLFFGTALILLILEALRRTSGWIML
                     GVVASFLAYAMLGAYLPEPWTHRGYDLERLVGQMYMTLEGIFGTPIDVSATFIILFTI
                     YGAILQFSNAGKFFIDFSFTALGGSRAGAGRTVVLSSFLLGGPSGSGVATTVTLGAVA
                     YPLLARAGYGKDAAGGLLAAGGLGAILSPPVLGAAAFLIAEFLKISYLDVILMATIPT
                     LLYYLSLFVMVEIDSRKLGIQSVVIPDSTGLWTLTRLYGFHFTSLVAIVVFMLIGYTA
                     IAAVFWATIIAFVLSFLRKECALYPGKLIGALNAGSVGVLAVAVTCAAAGLIVGVVTL
                     TGLGLKFSAIIIDYAGNSVLLTAVYSGMIVWIIGLAVPVTASYIICAVIVAPALTHLG
                     VPDFAAHMFIFYYAVLSEVSPPTALSPFAAAAITGGNPYKTTLQSWKYTMPAFIFPFT
                     FVVDPAGAGILLKGPWMAVVWTSLTAAIGIVALAGGVQGWLFKKTALAERLLLIAAGL
                     LLVY"
     gene            complement(1882..2394)
                     /locus_tag="VK429_03325"
     CDS             complement(1882..2394)
                     /locus_tag="VK429_03325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90873.1"
                     /translation="MARRLPLLLLIAAGGAFLFRPTTVLEFENAGRGIVARYPMETGD
                     AFSITYQHSIYRQPVTEDFSVGPGGDLILTGVRSESGAVLEYFGFSDSRPFHAMNRPM
                     RTIVFRVAMEGAQQLTLGDRRISFLALGDPGDRITARLADDSLARRGIGWAAATLRRM
                     GILAWPRSSR"
     gene            complement(2407..3363)
                     /locus_tag="VK429_03330"
     CDS             complement(2407..3363)
                     /locus_tag="VK429_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013902736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HLN90874.1"
                     /translation="MKRAVLITLALALIALPAGAVEKTRLSVVTGGTGGVYYPLGGAI
                     ANVLSKHLQGVAATAEVTSASIDNLKLIGAGKADIAFSMSDSAWDGYSGNGKFHGKLP
                     LRSIVVLYANKTQVVTVQGKGIEKMSDLKGKRISTGAPGSGTELIALRLLEAYGIDPE
                     KDVKREKLSVAESVGAIKDNKIDAFIWSGGLPTAAIVDLGATPGQKLMLLDHSDAIPA
                     MVKKYGPLYVRDTIPAKTYPGQEKDVNILSVWNILAVNEKMDDTMAYNITKTIFENKP
                     ELVAVHKEAQHIALENQLNGGSPIPFHPGALKYFAEKGIKKP"
     gene            complement(3560..4144)
                     /locus_tag="VK429_03335"
     CDS             complement(3560..4144)
                     /locus_tag="VK429_03335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011494086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HLN90875.1"
                     /translation="MKTKSGIPYLPDNDLAGPAELVNPIRARRAGGKLLNLDRILLHS
                     PPFAQGWNSMFGAIRNRLSLSPKLRELAIVAIGALNKADYEYAHHAPDFLKAGGTKEQ
                     LGALADVPSALDNRKLFDEAERATLTLTCEMTRNIAVADATMKRVRALLPDPQVVELA
                     GTIAGYNMVSRFVVATGIELESPHRGSVTPQTKA"
BASE COUNT          857 a         1325 c         1362 g          772 t
ORIGIN      
        1 gatagaccag gagaagccca gcggcgatca gcagcaagcg ctccgcaagg gcggttttct
       61 tgaacagcca cccctggacg ccaccggcaa gggccacgat cccgatggcg gccgtgaggc
      121 tggtccagac cacggccatc cacggcccct tgaggaggat tcccgcgccc gcggggtcca
      181 ccacgaacgt gaaggggaag atgaacgccg gcatcgtgta tttccaggac tggagcgtcg
      241 tcttgtacgg attcccgccc gtgatggccg ccgccgcgaa gggagacagg gcggtgggag
      301 gcgagacctc ggagagcacg gcgtagtaaa agatgaacat gtgcgccgcg aagtcgggca
      361 ctcccaggtg cgtgagtgcc ggggcgacga tcaccgcgca gatgatgtag gacgcggtga
      421 cgggcacggc aaggccgatg atccacacga tcatcccgct gtagaccgcc gtcaggagga
      481 cgctgttgcc cgcgtaatcg atgatgatgg cgctgaattt gagcccgagg cccgtcaatg
      541 tgacgacgcc gacgatcagg ccggccgcgg cgcaggtcac ggcaaccgcg agaacgccga
      601 ccgagcccgc gttcagcgcc cctatgagtt tgccggggta gagggcgcac tccttccgca
      661 ggaagcttaa gacgaaggcg atgatcgtgg cccagaacac ggctgcgatg gcggtgtagc
      721 cgatcagcat gaacacaacg atggccacca gggaggtgaa gtggaacccg tagaggcgcg
      781 tcagcgtcca cagtcccgtg gagtccggga tcaccacgct ctggattcct agcttccggg
      841 agtcgatttc caccatcacg aagagggaga ggtagtaaag gagcgtgggg atggtcgcca
      901 tcaggatcac gtcgaggtac gagatcttga ggaactcggc gatcaggaag gccgcggcgc
      961 caaggaccgg cggggagagg atggcgccca gccctcccgc cgcgaggagg ccgccggcgg
     1021 cgtctttccc gtaccccgca cgggcgagca gggggtaggc caccgcgccc agggtcaccg
     1081 ttgtggcgac gccgcttccc gagggcccac cgagaagaaa tgaggaaagg acaaccgtcc
     1141 gaccggcgcc cgcgcgcgac ccgccgagcg ccgtgaacga gaaatcaatg aaaaacttcc
     1201 ctgcgttcga aaactggaga atggccccgt agatcgtgaa gaggatgatg aaggtggccg
     1261 agacgtcgat gggcgtcccg aagatcccct ccagcgtcat gtacatctgg ccgaccaggc
     1321 gctccaggtc gtacccccgg tgggtccaag gctccggaag gtaggccccc aacatggcgt
     1381 acgcaaggaa agacgccacc actcccagca tgatccatcc ggaagtcctg cgaagcgcct
     1441 ccaggatgag caggatcagc gcggtgccga agaaaaggtc ccagcgggtg ggagtgacgg
     1501 cacggtagat gaagttgtcg aagtcgacca gcatataggc gatggcggca acagacagaa
     1561 gagccaggac cacgtcgaac gccatgatcc ggtcgcggaa tctgggagcg atcgggaaga
     1621 ggaaaaacgt gagaaagagg acgaagccca catggatggc ccgcaggacc tgggcctgga
     1681 cgatcccgta ggctgcatac aggtggaaga gcgacatgag cacgcccacc gcaatgagaa
     1741 atacctggac cttccccttg aagtggctgg ccgccccctc ttcggcctcc acgaattttt
     1801 cggcttcctt gagggcctcc tcgctgaccc cgatttccag cccgcggatt tcctgtccgc
     1861 tttcctcgac gcgcttgtcg gtcaccggct actccttggc catgcgagga ttcccattcg
     1921 ccgcaacgtt gccgcggccc acccgatccc gcgcctcgcc agggaatcgt cggccaggcg
     1981 ggccgtgatc cggtcgccgg gatcgcccag ggcgaggaac gaaatccgcc ggtcgcccag
     2041 cgtcagttgc tgtgctcctt ccatggcgac ccggaacacg atcgtccgca tcggccggtt
     2101 catggcatgg aacggccggg agtcgctgaa tccgaagtac tccaggaccg ccccgctttc
     2161 gctgcggacg ccggtcagga tcagatcccc gcccgggccc accgagaaat cctcggtcac
     2221 cggttggcgg tagatggagt gctggtaagt gatcgagaac gcatcccccg tctccatggg
     2281 gtaccgggcg acgatccctc gcccggcgtt ctcgaattcg agcactgtcg ttggacggaa
     2341 gaggaaagcc ccccccgcgg caatcagcag caggaggggc agacgccgcg ccatgctcac
     2401 gccggatcag ggcttcttta tgcccttctc cgcgaaatac ttcaaggcac ctggatggaa
     2461 cgggatgggc gatcccccat tgagctggtt ctccagcgcg atgtgctggg cttccttgtg
     2521 cacggccacg agctccggct tattctcgaa gatcgtcttc gtgatgttgt aggccatcgt
     2581 atcgtccatc ttctcgttga ccgccaggat gttccagacc gagaggatgt tcacgtcctt
     2641 ctcctggccg ggatacgtct tcgcggggat cgtgtccctg acgtacagag gcccgtattt
     2701 tttcaccatg gcggggatcg cgtcggaatg gtccaggagc atgagcttct ggcccggggt
     2761 agcgcccagg tcgacgatcg ccgcagtggg gagcccgccc gaccagatga aggcgtcgat
     2821 cttgttgtcc ttgatcgccc ccacggattc cgccacgctg agcttctcgc gcttgacgtc
     2881 cttctcggga tcgatgccgt aggcttcgag aagccgcagc gcgatgagct ccgtgccgct
     2941 tccgggggcg cccgtggaga tcctcttccc cttaaggtcg ctcatcttct cgatcccctt
     3001 gccctggacg gtcacgactt gggtcttgtt ggcgtagagg acgacaatgg aacgcaaggg
     3061 cagcttccca tggaattttc cgttgccgct gtacccatcc caggcgctgt ccgacatgct
     3121 gaaggcgatg tccgctttgc cggcgccgat gagtttcagg ttgtcgatcg aggcgctcgt
     3181 cacctcggcg gtggccgcga cgccctgtaa atgcttggag aggacattcg cgatggcccc
     3241 gcccagggga tagtacacgc cgcccgttcc gccggtcacg acggacaaac gcgtcttttc
     3301 taccgctccg gccgggaggg cgatcagggc cagagcaagg gtgatcagaa cggctcgctt
     3361 catgagagac ctccttttcc tgtgaggacc tgtgaaaaat aaacgaggtt ataatatata
     3421 aaattgaacc ggaaaacgat tcgaaaatgt aaactccctg acggtcaccg cctggaggcc
     3481 tgccgatccg tataacacat ttttaatccg ggatcgcaat cgtgtacgtg aaccgttcct
     3541 cttcttatcg cagagcaggt cacgccttgg tttgtggcgt aaccgatccc cggtgtggcg
     3601 attccagctc aatcccggtg gccaccacga agcgggacac catattgtag ccggcgatgg
     3661 ttcccgccag ctccacaacc tgcggatcgg gtaacagggc gcgcaccctc ttcatggtgg
     3721 cgtccgccac ggcgatgttg cgcgtcatct cgcaggtcag cgtcaacgtg gcgcgctccg
     3781 cttcatcgaa caacttgcga ttgtcaagag cggaaggcac atccgccagc gcgcccaatt
     3841 gctccttggt accacctgcc ttcaggaaat cgggcgcatg gtgcgcatat tcatagtcgg
     3901 ccttgttgag cgccccgatc gccacgatgg ccaactcccg cagtttgggg gacaacgata
     3961 accggttgcg gatggccccg aacatggaat tccacccctg ggcgaagggt gggctgtgca
     4021 gcagtatgcg gtcgaggttc agcagtttgc ccccggcacg gcgggcgcga atggggttga
     4081 ccagctctgc cggaccggca agatcattgt ccgggagata aggaataccg gattttgttt
     4141 tcatggttcc tcccttccga gagttgatca tagtgcggaa atctttcgca tgcctccatc
     4201 ggattttcga cgggagtccg cacggggtgc aaaccccgtg cggacaacgg ccttcggagg
     4261 aaggattacc ggcgaatgtc gggttccccc atcacatcag gccccatctc cattat
//
LOCUS       DATGYW010000241         1615 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_397084, whole genome shotgun sequence.
ACCESSION   DATGYW010000241 DATGYW010000000
VERSION     DATGYW010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397084"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..548)
                     /locus_tag="VK429_03340"
     CDS             complement(<1..548)
                     /locus_tag="VK429_03340"
                     /inference="COORDINATES: protein motif:HMM:TIGR00530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HLN90876.1"
                     /translation="MRGAMRSLLLLLLTAGSSIAAFLADRILPGGNRAERVMGWWGRA
                     FVRSGGWNLRVEGMENLPSGGAVLVANHQSAVDIPMLLSAFPRPVRFLAKRELGEIPL
                     FGKAMAAAGNLFIDRDDPRDAVRMLREAGAQLRDGRLVVVFPEGTRSGDGSIGEFRTG
                     AFYLAQKSGAPVVPVYLDGGYRA"
     gene            complement(548..901)
                     /locus_tag="VK429_03345"
                     /pseudo
     CDS             complement(548..901)
                     /locus_tag="VK429_03345"
                     /inference="COORDINATES: protein motif:HMM:NF015935.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="JAB domain-containing protein"
     gene            1218..>1615
                     /locus_tag="VK429_03350"
     CDS             1218..>1615
                     /locus_tag="VK429_03350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015249105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLN90877.1"
                     /translation="MEGKSLAELLSSFRENVETVLLGKRESVDLAIASFIAGGHVLLE
                     DVPGTGKTTLARALSSGISGTFRRIQFTSDLLPQDIIGMHILDAERKSFVFSPGPLFA
                     NVVLADEINRSNPRAQSALLEARSERQVTV"
BASE COUNT          272 a          597 c          509 g          237 t
ORIGIN      
        1 gcccggtacc cgccgtccag gtagaccggt acgacgggcg ccccggactt ctgcgcaagg
       61 tagaaggccc ccgtccggaa ctccccgatc gacccgtccc cgctgcgggt cccttccgga
      121 aagacgacca cgagccgccc atcgcgaagc tgtgccccgg cctcccggag catgcggacc
      181 gcgtccctcg ggtcgtcccg gtcgatgaag aggttccccg ccgccgccat cgccttcccg
      241 aacagcggga tctcccccag ttcccgcttg gcgagaaacc ggacgggccg cgggaacgcg
      301 gacaggagca tcgggatgtc cacggcgctc tgatggttcg ccaccaggac ggccccgccg
      361 gacgggaggt tctccatccc ctcgacgcgc agattccacc ctcccgaacg aacgaaggca
      421 cggccccacc atcccatgac gcgttccgcc cggttccctc cgggaaggat tcgatcggcc
      481 aggaacgccg cgatggagga tcccgcggtg agcaggagga ggagcaggga ccgcatcgcc
      541 ccccgcatca ccagtccccc tcttccctga agctgaagaa caccgcgtcc ccgaggataa
      601 catggtcgac cacggggatc ccgaggatcc cccccgcgga ccggagcctg cgcgtcacct
      661 cccggtcctg cccgctgggg gcgggatcgc cgctcggatg gttgtggagc aggaggaccg
      721 ccgccgcgcg ttcccggacc gccggggcga aaacctctct cgggtggatg aggctgccgt
      781 cgaggatccc cgccgacacc cgctcctcac gcagggggcg gtgcttcacg tcgaggagca
      841 cggcgacgaa cacctccacg ggcgaatcgg agagcaggaa ccggtatcgc tcgaagacat
      901 ccgccgccga gcggaacggc tccgggcgtc ggcgtgggac cgcgaacgcc ctgcgcgcga
      961 gctcgagaac cgcctcccac cggagacgtc ttccctcgtc cgacggttcg cctccccgtg
     1021 cggcaaggcg catcccttcc ccgtcttcgg ggaacgccct ccggaacagt tccgtctctt
     1081 ccacgccttc cagaggccgc gcgtcgcggc cggtgatacc cggcattccg cctcccgagg
     1141 ggaaatgccg gggttccatt caaataccat tccggatttt tgtcaaagcg tcgtccggtt
     1201 gcgggataat gtctcccatg gaagggaaat ccctcgccga gctgctgtcg tcgttccgtg
     1261 agaacgtcga aaccgtcctt ctcgggaaac gggagtccgt cgacctggcg atcgcctcct
     1321 tcatcgcggg cggccacgtg ctcctcgagg acgtcccggg caccggcaaa acgacgctgg
     1381 cgcgcgccct ctcctcgggg atctcgggga ccttccgccg gatccagttc acgagcgacc
     1441 tccttcccca agacatcatc ggcatgcaca tcctcgacgc ggagcggaaa tcgttcgtct
     1501 tctcgccggg accgctgttc gcaaacgtgg tcctcgccga cgagatcaac cggagcaacc
     1561 ccagggccca gagcgcactg ctcgaggcga ggagcgagcg gcaggtgacg gtgga
//
LOCUS       DATGYW010000242         1919 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_397179, whole genome shotgun sequence.
ACCESSION   DATGYW010000242 DATGYW010000000
VERSION     DATGYW010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397179"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VK429_03355"
     CDS             complement(<1..422)
                     /locus_tag="VK429_03355"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN90878.1"
                     /translation="MTERLRRIDTLLIAGAFLLLLPFLKFQRTTDYIIFCVFVLSFDL
                     IYGYMGRLSFGHMLFLGAGAYGATLFAEHVSPNPFLSVLFAIAAAAAVGALLGPIVVR
                     TTGAAFALINLAFNQVGHFLVLIAFARYTGGEDGMSAV"
     gene            complement(419..1120)
                     /locus_tag="VK429_03360"
     CDS             complement(419..1120)
                     /locus_tag="VK429_03360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017873981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN90879.1"
                     /translation="MSEPLLAVDAVDAAYGSARVLHQVSLRVDPGEMVFIAGRNGAGK
                     TTLLKTIAGFMPPAAGAVRLEGRDLRGIRPENVARLGVRYVFQDKRVFSKLTVRENLE
                     LAAHPSGERMSDVVARMVSIYPAMEKFLDSKAGGLSGGQRQILLIGRALTGNPKILLV
                     DEPTEGLAAGVIDDIFRLLSGMKGRLSTLIVEQNLPVVARLADRVYVMKEGKIFQELA
                     TRADIEASGALEKNL"
     gene            complement(1117..>1919)
                     /locus_tag="VK429_03365"
     CDS             complement(1117..>1919)
                     /locus_tag="VK429_03365"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN90880.1"
                     /translation="EGGRPPPRRRREPSLPEETILETRSVTKRFDGFAAVSGVNYRLR
                     EGESAGIIGPNGAGKTTFFNLLTGMFPPTEGTVLYRGDDITRIPAHGRVRRGIVRTFQ
                     LVSVFDSLTVRENLVLALIRAAKERAASARFFLRDAWSGNLSDLSAGALGTVGLREKA
                     LWKTAELSYGDKRKLEIALALCLRPSVLLLDEPFAGLSDVEIVEVLELIRKVRKEFTL
                     VIIEHKISRIVDLVSRLSVMHEGKLIAEGGPAEVLADPLVRQVYWGRP"
BASE COUNT          334 a          665 c          637 g          283 t
ORIGIN      
        1 aagacggccg acatgccgtc ctcccccccg gtgtaccggg cgaaggcgat cagaacgagg
       61 aaatggccga cctggttgaa cgccaggttg atgagcgcga acgccgcgcc cgtcgtccgg
      121 acgacgatcg gacccagcag cgccccgacc gcggcggcgg cggcgatcgc gaacaggacg
      181 gagaggaacg ggttcggcga gacgtgctcc gcgaacagcg tcgcgccgta ggcgcccgcg
      241 cccaggaaca gcatgtgccc gaaggagagg cgacccatgt agccgtaaat gaggtcgaag
      301 gagagcacga aaacgcagaa gatgatgtaa tcggtcgtgc gctggaactt gaggaacggg
      361 aggaggagca ggaacgctcc ggcgatcagc agggtgtcga tccgccgcag tctctcggtc
      421 acaggttctt ctccagcgcc cccgacgcct cgatgtcggc gcgggtggcg agctcctgga
      481 agatcttccc ctccttcatc acgtagaccc ggtcggcaag ccgcgcgacc accggcaggt
      541 tctgttcgac gatcagcgtg gacaggcgcc ccttcatccc agaaaggagc cggaagatgt
      601 cgtcgatcac tcccgccgcc agcccctcgg tgggctcgtc gaccagcagg atcttcgggt
      661 tccccgtcag cgcgcggccg atcaggagga tctgacgctg ccccccgctc aggccccccg
      721 ccttgctgtc gaggaacttc tccatcgcgg gatagatcga gaccatccgg gcgacgacgt
      781 cggacatccg ctcgccggag gggtgcgccg ccagctcgag gttctcccgg acggtcaatt
      841 tcgagaagac gcgcttgtcc tggaagacgt accgcacgcc gaggcgcgcc acgttctccg
      901 gacggatccc ccgcaggtcc ctcccctcga ggcgcacggc gccggccgcg gggggcatga
      961 atcccgcgat cgtcttgagc agcgtcgtct tccccgcgcc gttgcgcccc gcgatgaaca
     1021 ccatttcgcc ggggtccacg cgaagcgaca cctggtgcag gacgcgcgcg ctcccgtacg
     1081 cggcgtcgac ggcgtcgacg gcgagcagcg gctcgctcac ggccgccccc agtacacctg
     1141 ccggaccagc gggtcggcga gcacttccgc gggcccgccc tcggcgatca gtttcccctc
     1201 gtgcatcacc gacagcctcg acacaaggtc cacgatgcgg gagatcttgt gctcgatgat
     1261 caccagggtg aattccttcc tcaccttgcg gatcagctcg aggacctcca cgatctccac
     1321 gtccgagagt ccggcgaacg gctcgtccag caggaggacg gaggggcgca ggcagagcgc
     1381 gagggcgatc tccagcttcc gcttgtcgcc gtaggaaagc tccgcggtct tccagagcgc
     1441 cttctcccgg agaccgacgg tccccagcgc accggcggag aggtcagaga ggttcccgct
     1501 ccatgcgtcc cggaggaaaa accgggcgga cgcggcgcgt tccttcgcgg cgcggatcag
     1561 ggcgaggaca aggttctccc gcacggtcag gctgtcgaac accgatacga gctggaaggt
     1621 ccggacgatc ccgcggcgga ccctcccgtg ggcgggaatc cgcgtgatgt cgtccccccg
     1681 gtacagcacc gtcccttcgg tggggggaaa catcccggtc agcaggttga aaaaggtggt
     1741 ctttcccgcc ccgttgggcc cgatgatccc cgccgactcc ccttcccgga ggcggtagtt
     1801 caccccggac acagcggcga agccgtcaaa ccgcttggtg acgctccggg tttcgagaat
     1861 ggtctcttcg ggcaaggaag gctcccttcg acggcgggga ggggggcgcc ccccctccc
//
LOCUS       DATGYW010000243         2041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_236615, whole genome shotgun sequence.
ACCESSION   DATGYW010000243 DATGYW010000000
VERSION     DATGYW010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2041)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2041
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_236615"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..795)
                     /locus_tag="VK429_03370"
     CDS             complement(<1..795)
                     /locus_tag="VK429_03370"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HLN90881.1"
                     /translation="MRITRKYLLGEMTGPFLVGVGSFTVIILLQQFSRLADLVIAKGV
                     PTPLVGRLLLSLIPPFFEITLPASLLLAVLLGLGRLAADSETTALSAAGVGMRGVALP
                     VLAASVITFAAVLLTGWQGVPWGYRETQRTLARIVSERAGAGASGHVFREITPDVLVY
                     PDRVSSDGQRMFGVFLSFRPLGDDPLLVFAREGRFVPATDDGVVGLELYDGSIHGEPT
                     DKPLYRVASFGRMTFRIPLEASSIPGADNPNGMTLPELSRKVDATGG"
     gene            820..1755
                     /locus_tag="VK429_03375"
     CDS             820..1755
                     /locus_tag="VK429_03375"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004162.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HLN90882.1"
                     /translation="MDVIEGSGNFSPPGETSLTIGNFDGVHLGHRELLRRTVAHARDL
                     RLQAVALTFTPHPVRFFTPRARFYEITSMGEKASRMEELGIDLLVVESFTGAIGGMGP
                     EEFARTVVHERLRARFVTVGYDFTFGRNRTGSPGMLRRIGSELGFEVDVVPPLLRGGA
                     IVSSSRIRELLLSGRVREAEELLCRPYAVSGRVIPGASRGRKLGFPTANVEFVQELLP
                     LPGVYVIDAVVGGVERRGVANVGFNPTFGENSLGVEAHLLDFEGDLYGQEMTVRFRDR
                     IRDERKFKSVEELVRQIEKDVGYARSARLTKCSIS"
BASE COUNT          342 a          637 c          738 g          324 t
ORIGIN      
        1 gcccccggtc gcatcgacct tccttgacag ctcggggagg gtcatcccgt tcggattgtc
       61 cgctccgggt atggaggagg cctcgagggg gatccggaac gtcatccgcc cgaaggaggc
      121 gacgcggtac aacggcttat ccgtcggctc gccgtggatc gacccgtcgt acaactccag
      181 gccgaccacc ccgtcgtcgg tggcgggtac gaagcgcccc tcgcgcgcga acacgagaag
      241 cggatcgtcc cccagcggac ggaaggagag gaagaccccg aacatccgct gcccgtcgga
      301 agagacccgg tcgggataca ccaggacatc gggtgtgatc tcgcggaaga cgtgcccgga
      361 ggcgccggcg ccggcccgct cggagacgat ccgggcgagg gtgcgctgcg tctcgcggta
      421 cccccatgga accccttgcc atccggtgag cagcaccgcg gcgaacgtga tgacgctggc
      481 ggccagcacg gggagggcga caccgcgcat ccccacgccg gcggcggaaa gcgccgtcgt
      541 ctccgagtcc gcggcgagcc gcccgaggcc gagcaggacc gcaaggagca gggaggcggg
      601 aagggtgatc tcgaagaacg gggggatgag ggagaggagg aggcgcccga cgaggggcgt
      661 cggcaccccc ttcgcgatca ccaggtccgc gagccgcgag aattgctgga gcaggatgat
      721 gacggtgaag cttcccacgc cgaccaggaa cgggccggtc atttcgccga gcagatattt
      781 ccgtgtgatt ctcatcgtgt agtatcatac gctatcatta tggatgtcat cgaggggtcc
      841 gggaacttct ccccgcccgg ggagacttcc ctgacgatcg gaaatttcga cggggtgcac
      901 cttggccatc gggagcttct gcggcggacg gtggcgcacg cccgggacct ccgcctgcag
      961 gccgtcgcgc tcaccttcac gccgcatccg gtccgcttct tcacccccag ggcgcgtttc
     1021 tacgagatca cctcgatggg ggaaaaggcg tcccggatgg aggagctcgg gatcgatctc
     1081 ctggtcgtcg aatcgttcac cggggcgatc ggagggatgg ggccggagga gttcgcccgg
     1141 acggtcgtac atgagcggct gcgcgcccgc ttcgtcacgg tgggatacga cttcaccttc
     1201 ggaaggaacc gtacggggtc tcccgggatg ctccggagga tcgggagcga gctcggtttc
     1261 gaggtggatg tcgtaccgcc gcttctgcgc gggggggcga tcgtgagttc cagccgcatc
     1321 cgggagcttc tcctctcggg acgggtgcgg gaggccgagg aactcctgtg ccggccgtac
     1381 gcggtgtccg ggcgggtgat ccccggggcc tcccgggggc gaaaactcgg gtttccgacg
     1441 gcaaacgtcg agttcgtgca ggaactcctc ccgctgccgg gcgtgtacgt gatcgacgcc
     1501 gtcgtgggag gcgtcgagcg cagaggggtg gccaacgtcg ggttcaaccc gaccttcggg
     1561 gagaactccc tcggggtgga ggcgcacctc ctcgacttcg agggcgatct ctacgggcag
     1621 gagatgacgg tgcgtttccg ggaccgcatc cgtgacgagc ggaagttcaa gagcgtggaa
     1681 gaactggtgc gccagatcga gaaggatgtc gggtatgccc gatcggcgag gctgacgaag
     1741 tgctccattt cataaatacg gcaacggttc cactgagcga ttccggaagg cgctgtgccc
     1801 cccgttcttc ctacggcggg ggtaccccag ggagtgttgt ccgtccggga gtggggcgcc
     1861 ccccctcctg cggcgactcc gccggactat ccagttgcgt cacttcgcaa tgatccccac
     1921 atcatcccgc cggatcgggg aggacgtacc ccgcgtcggg gatgacgagc gggacgggca
     1981 gctcgccgag gaaccgtttc gccgcgagga tcgcctccgc gagcgtcggg gcgggggtca
     2041 t
//
LOCUS       DATGYW010000244         1798 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_397469, whole genome shotgun sequence.
ACCESSION   DATGYW010000244 DATGYW010000000
VERSION     DATGYW010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397469"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /locus_tag="VK429_03380"
     CDS             complement(<1..327)
                     /locus_tag="VK429_03380"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007418837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit C"
                     /protein_id="HLN90883.1"
                     /translation="MKDLIAELRASIAATLLLAVLCCGIYPVAVWAVGQGLFSDKANG
                     SLVRFNGKVVGSALIAQGFAGPAYFHPRSSAAGQGYDAVHSGGTNLGPTSKKLTEDVK
                     QRVAEYR"
     gene            complement(339..>1798)
                     /gene="kdpB"
                     /locus_tag="VK429_03385"
     CDS             complement(339..>1798)
                     /gene="kdpB"
                     /locus_tag="VK429_03385"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020715566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HLN90884.1"
                     /translation="PGESFLDRMIQLVEGAERQKTPNEIALTILLSALTIIFLVVVMT
                     LKFFGIYSGVSFSVTVLVALLVCLIPTTIGGLLSAIGIAGIDRLVQKNVLAMSGRAVE
                     AAGDVNVLLLDKTGTITLGNRQATEFLPAKDVRIEELADAAQLASLADETPEGRSIVV
                     LAKQYGLRGRNLSEMPEARFIAFSAQTRMSGVDVEGRKIRKGAADAVKNFVGGRFPAD
                     VEDAITRVSFQGGTPLVVADNARILGTVYLKDIVKGGLSDRFERFRAMGIKTVMITGD
                     NPLTAAAIAREAGVDDFLAEARPEDKLALIRKEQAAGYLVAMTGDGTNDAPALAQADV
                     GVAMNTGTQAAKEAGNMVDLDSNPTKLIEIVEIGKQMLMTRGALTTFSIANDVAKYFA
                     ILPAMLIGVFPVIGPMNIMRLSSPQSAILSAVIFNALIIVALIPLALRGVHFRPLGAS
                     ALLRRNLLIYGLGGVLLPFPGIKIVDLAVNLFHLA"
BASE COUNT          308 a          618 c          559 g          313 t
ORIGIN      
        1 ccggtattcg gcaacccgct gcttcacatc ctcggtcagc tttttcgacg tcggtccgag
       61 gttcgtcccc ccggaatgga ccgcgtcgta cccctgcccc gccgccgagg aacgtggatg
      121 aaaataggcc ggcccggcaa atccttgcgc gatcagcgcc gatcccacga ccttcccgtt
      181 gaatcggacc agggaaccgt tggctttgtc ggaaaacagt ccctggccga cggcccagac
      241 ggccaccggg tagatgccgc agcacaggac cgccagcagc agcgttgcgg cgatcgatgc
      301 gcggagttcc gcgatcaggt ccttcatggg tcccctcctc acgcgagatg gaacaggttc
      361 actgccaggt cgacgatctt gatccccggg aaggggagca gcacgccgcc caacccgtaa
      421 atgaggaggt tgcggcgcag gagcgcactg gcgccaagcg gccggaaatg taccccgcga
      481 agcgccaggg ggatgagcgc gacgatgatg agggcgttga agatgacggc gcttaagatc
      541 gcgctctggg gcgaggagag ccgcatgatg ttcatcggtc cgatcaccgg gaacaccccg
      601 atcagcatgg ccgggaggat ggcgaaatat ttggccacat cgttggcgat gctgaaagtg
      661 gtgagcgccc cccgcgtcat gagcatctgc ttgccgatct ccacgatttc gatgagcttg
      721 gtggggttgg agtcgaggtc caccatgttc cccgcctcct tggcggcctg ggtccccgtg
      781 ttcatcgcca cccccacgtc tgcctgcgcc agggcggggg catcgttggt cccgtccccc
      841 gtcatggcca ccagataccc ggccgcctgc tccttccgga tgagcgccag tttatcctcc
      901 ggcctcgctt ccgccaggaa gtcgtccacg cccgcctcgc gggcgatcgc cgcggccgtc
      961 aaggggttgt ccccggtgat catcaccgtc ttgatcccca tcgcccggaa ccgctcgaac
     1021 cggtcgctca agcccccctt gacgatgtcc ttcaggtaca ccgtcccgag gatcctggcg
     1081 ttgtccgcga cgaccaaggg ggtcccgccc tggaaggaaa cacgggtgat cgcgtcctcc
     1141 acatccgcag ggaaccggcc cccaacgaag ttcttgacgg cgtccgccgc ccccttgcgg
     1201 atctttcttc cttccacatc cacaccgctc atccgcgtct gcgccgagaa ggcgatgaat
     1261 cgcgcctcgg gcatctccga gaggttcctc ccccggaggc cgtactgttt cgccaggacg
     1321 acgatgctgc ggccttccgg cgtctcgtcg gccagcgagg cgagctgggc ggcgtccgcc
     1381 agctcctcga tgcgcacatc cttcgccggc agaaactccg tcgcctgccg gttgcccagc
     1441 gtgatcgtcc ccgttttgtc gaggagcagg acgttcacgt cccccgccgc ctccaccgcg
     1501 cgaccgctca tggcgaggac gttcttctgg acgagccggt cgatcccggc gatcccgatg
     1561 gcggagagca ggcccccgat ggtggtgggg atgaggcaga ccagcagcgc caccaggacg
     1621 gtgacggaga aggaaacgcc cgaatagatc ccgaagaact tgagggtcat gaccacgaca
     1681 aggaagatga tcgtcagcgc cgacagcagg atcgtcaggg cgatctcgtt cggcgtcttc
     1741 tggcgctccg cgccttccac cagttggatc atccggtcca ggaagctctc ccccgggt
//
LOCUS       DATGYW010000245         2242 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_397511, whole genome shotgun sequence.
ACCESSION   DATGYW010000245 DATGYW010000000
VERSION     DATGYW010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2242)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2242)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2242
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_397511"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..328)
                     /locus_tag="VK429_03390"
     CDS             complement(<1..328)
                     /locus_tag="VK429_03390"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF013432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HLN90885.1"
                     /translation="MAHFTFRTAGETHGPALVTIVEGVPAGLPVRAEEINRELARRQV
                     GYGRGERMQIEKDEVEILSGVRFGKAMGGPVAMLLRNRDWVNWREKMARDGDGEGIPP
                     LDTARPG"
     gene            complement(406..>2242)
                     /gene="pilQ"
                     /locus_tag="VK429_03395"
     CDS             complement(406..>2242)
                     /gene="pilQ"
                     /locus_tag="VK429_03395"
                     /inference="COORDINATES: protein motif:HMM:TIGR02515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HLN90886.1"
                     /translation="DGTAPVKGPAVVGIDLEDLPDASNVVIATAGDPPYQVSKKAGGV
                     TLVFKGAVAEKGLLRRIDARKFDIPVKAIAPSGGKNGVTVAVAFAPGSAYTVEKREDS
                     VVVAFPKGMTEGKATLVARAAPGSATHVAKTGEAPEPAEANGEPAELQGSQSWGFLTG
                     SSDVGRKYRGQRISMDFKDADLTNVFRIIAEVSNLNIITSDDVKGKVSLRLVNVPWDQ
                     ALDIVLRSKSLGAAQEGNVLRIAPLSSLRKEEQDRFDAQKQVEQSRQEALNRAAEVRA
                     TQEAVFDTIPVSYSKASELLTKIKPLTSKFGKLDSDDRTNVLIIRDLPQHIAEVKALV
                     ATLDTATPQVLIEARIVEVDTTFTRELGVQWGGAYRTERGMTKYGMTGVQDPSGAAIP
                     GSAVGAATTNPFTPTSPPPTYAVNLPAAVGLGSGGGIAFGILRDNLRLDLSLSALEAS
                     GKGKIISSPKIVTTDNKEATIEQGTQIPYSTVSASGTNVQFIDATLSLKVTPHITPDG
                     RISMKLEAKNDSQGDVAPGSNTPSINKKKATTDVLIRDGETTVIGGILQITRTESRSG
                     LPWLSKIPVLGYFFRHDINSTTNRELLIFITPRILKQEPIQAKAS"
BASE COUNT          338 a          765 c          707 g          432 t
ORIGIN      
        1 gcccggggcg agcggtgtct agcggcggaa tcccctcgcc gtcaccgtcc cgggccatct
       61 tctcccgcca gttgacccag tcacggttgc gcaggagcat cgcgacgggg ccccccatcg
      121 cctttccgaa ccggacgccc gagaggatct cgacctcgtc cttctcgatt tgcatccgtt
      181 ctccgcggcc gtaccccacc tgccgccggg ccaactcccg gttgatctct tccgcgcgaa
      241 cggggaggcc cgccgggacc ccctcgacga tcgtgaccag ggccgggccg tgggtctccc
      301 ccgcggtccg gaacgtgaaa tgtgcgatgg cctaccctcc ttgaatgaaa aaaggcaccc
      361 ggacggaacc gcccaggtgc ccgctggttg ccgcccggac cgggttcagg aagccttggc
      421 ctggatcggt tcctgcttca ggatcctcgg cgtgatgaag atcagcaact cccggttcgt
      481 ggtcgaattt atgtcatgcc ggaaaaaata ccccaggacg gggatcttcg agagccaagg
      541 cagcccggat cggctctcgg tgcgcgtgat ctggaggatc ccgccgatga ccgtcgtctc
      601 gccgtcgcgg atcaggacat cggtggtcgc cttcttcttg ttgatcgaag gcgtatttga
      661 cccgggagcc acatcgccct gggaatcgtt cttcgcctcg agcttcatcg agatccgccc
      721 gtcgggcgtg atgtgcggcg tcaccttcag gctgagggtg gcgtcgataa actgcacgtt
      781 cgttcccgag gccgacacgg tggagtaagg gatctgcgtc ccctgctcga tggtggcttc
      841 cttgttgtcg gtcgtcacga tcttcggcga agagatgatc ttccccttcc cggacgcctc
      901 gagcgcggag agcgagaggt cgaggcgaag gttgtccctc aagatcccga aggcgatccc
      961 gccgcccgac cccaggccga ccgccgccgg gaggttcact gcataggtcg gaggggggct
     1021 cgtgggggtg aagggattcg tggtcgccgc accgaccgcc gacccgggta ttgccgcgcc
     1081 ggacggatcc tgcaccccgg tcatcccgta tttggtcatt ccgcgttccg tccgataggc
     1141 gccgccccac tggacgccga gttcccgggt gaacgtggtg tccacttcca cgatgcgagc
     1201 ctcgatgagg acctgcggcg tggcggtgtc gagcgtggcg accagggcct tcacctcggc
     1261 gatgtgctgc ggcagatccc ggatgatcag cacgttcgtc cggtcgtcgc tgtccagttt
     1321 cccgaatttc gacgtgagcg gcttgatctt ggtcagcagt tccgaagcct tgctgtagct
     1381 gaccgggatg gtgtcgaaga ccgcctcctg cgtcgccctg acctcggcgg cccggttcag
     1441 cgcctcctga cgggactgct cgacctgctt ctgcgcgtcg aaccggtcct gctcctcctt
     1501 cctgagggag gaaagcggcg cgatgcggag gacattcccc tcctgggctg ccccgagcga
     1561 cttcgagcgc aggacgatgt cgagggcctg atcccaggga acattgacca accggaggga
     1621 gaccttcccc ttgacgtcgt ccgaggtgat gatgttcagg ttgctgacct cggcgatgat
     1681 ccggaacacg ttggtgaggt cggcgtcctt gaagtccatg gagatccgct gcccacgata
     1741 ttttctcccg acgtcggaac tcccggtgag gaatccccat gactgcgagc cctggagttc
     1801 ggccggttcc ccattcgctt ccgcaggttc cggcgcctcg cccgtcttcg cgacgtgcgt
     1861 cgcactcccc ggagccgccc gcgcaaccag ggtggccttt ccttcggtca tgcccttcgg
     1921 gaacgccacc acgaccgagt cctccctctt ttccacggtg tacgcggagc ccggcgcgaa
     1981 cgcgacagcg accgtgaccc cgttcttccc gccggagggc gcgatcgcct tcacggggat
     2041 atcgaatttt ctcgcgtcga tccgccggag cagccccttc tccgcgacgg cgcccttgaa
     2101 cacgagcgtc acgccgcccg ccttcttcga aacctggtac ggaggatccc ccgccgtggc
     2161 gatcacgacg ttcgacgcgt cgggcaggtc ctcaaggtcg atcccgacga cggcgggacc
     2221 tttgaccgga gccgtcccgt cc
//
LOCUS       DATGYW010000246         2170 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_451680, whole genome shotgun sequence.
ACCESSION   DATGYW010000246 DATGYW010000000
VERSION     DATGYW010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451680"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..320
                     /locus_tag="VK429_03400"
     CDS             <1..320
                     /locus_tag="VK429_03400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011057028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoketolase"
                     /protein_id="HLN90887.1"
                     /translation="KPIIFNFHGYPWLIHRLAYRRTNHKNLHVRGYKERGNINTPMEL
                     AINNEVDRFSLAIDVVDRVPKLVSIGAHAKEKFRNMQIACRSYAYEHGIDIPEVIGWR
                     WPF"
     gene            341..1576
                     /locus_tag="VK429_03405"
     CDS             341..1576
                     /locus_tag="VK429_03405"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014812145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HLN90888.1"
                     /translation="MKVAVVNCGSSSIKYEVFRIHGWVRLAEGLIEKIGAADGRLRQR
                     RWNTDGTTEERSYRQPLPDHREAFAFMAGVNRSDRIIEHESELFGIGHRVVHGGGQFR
                     KPALVDDGVISALKELAPLAPLHNPPNILGMEVTRALFPHVPQVAVFDTAFHHTLPPH
                     AFHYAVPYDLYAEHHVRRYGFHGISHSYVATEASRHLGKGPSEVNLVTLHLGNGASAA
                     AVQNGRSVDTSMGMTPLEGLVMGTRCGDIDPALPFHLMRHAGMSAEKVEVLLETQSGL
                     TGICGMSDMREILDQAAKGSDRASLAVEMFCYRIRKYIGAYIAVLGRVDAVVFTGGIG
                     ENASAIRERVCRGLEHMGISIDDQKNASAGSRVTEIQKDGASMKVLVIRTDEEWEIAR
                     QTVQTIEIAEGRRDVSAER"
     gene            1607..>2170
                     /locus_tag="VK429_03410"
     CDS             1607..>2170
                     /locus_tag="VK429_03410"
                     /inference="COORDINATES: protein motif:HMM:NF014594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybutyrate CoA-transferase"
                     /protein_id="HLN90889.1"
                     /translation="MNRDWTRDAVSAEEAVGLLQSGMNVFVHGAAATPAPLLDSMVRR
                     KELEGIRLYHMHTSGDAPFVGPGCEGRFFSISLFTGAALRKPVEEGRADFMPIFLSDI
                     PALFQSGTVKLDAALLQVSPPDAHGCCTLGTSVDSAKSAADHARVIVAEINEQMPRTH
                     GNTVVPFERISAFVHTDRPLIEQAPETE"
BASE COUNT          431 a          698 c          684 g          357 t
ORIGIN      
        1 acaaaccgat catcttcaat ttccacgggt acccctggct gattcaccgg ctcgcctacc
       61 ggagaaccaa ccacaagaac cttcacgtgc gcggctacaa ggaacgaggc aacatcaaca
      121 cacccatgga actggcaatc aacaacgagg tggaccgctt cagccttgcg atcgacgtgg
      181 tcgaccgcgt accgaaactc gtgtcgatcg gcgcccacgc caaggagaag ttccggaaca
      241 tgcagatcgc ctgccggtcg tatgcgtacg aacacggcat cgacatccct gaggtcatcg
      301 gctggcgttg gccgttctga ttccgccggg gaggggaccg atgaaagtgg ccgtcgtaaa
      361 ctgcgggagt tcctcgatca agtacgaggt cttccgcatc cacggttggg tgcggttggc
      421 cgaggggctg atcgagaaaa tcggcgccgc cgacggccga ctccggcagc gtcggtggaa
      481 tacggacgga accaccgagg aacggagcta ccggcagccg ctgccggacc accgggaagc
      541 cttcgcattc atggccggcg tgaatcggag cgaccggatc atcgagcacg agtccgaact
      601 gttcggcatc ggccaccgcg tggtccacgg cggcgggcag ttccgcaagc cggcgcttgt
      661 cgacgacggg gtcatttccg ccctcaagga actggccccg ctggccccgc tccataatcc
      721 tcccaacatc ctcgggatgg aagtcacacg cgccctcttc ccccatgtgc cgcaagtggc
      781 ggttttcgac acggcgttcc accacaccct ccctccccac gccttccatt acgcggtgcc
      841 ctatgacctg tacgcggagc accacgtacg ccggtacggc ttccacggga tatcccactc
      901 gtacgtcgca accgaagcat cgagacatct cggcaagggg ccgtcggagg tgaacctcgt
      961 caccctccat ctcggcaacg gcgcaagcgc cgcagccgtc caaaacggca ggagcgtcga
     1021 cacctcgatg ggcatgaccc ccctggaggg ccttgtcatg ggcacgcggt gcggggacat
     1081 cgacccggcg ctccctttcc acctcatgcg gcatgccggc atgtccgcgg agaaggtcga
     1141 ggttcttctc gaaacgcaga gcggtctcac agggatctgc ggcatgagcg atatgaggga
     1201 gatcctggat caggccgcga aaggaagcga tcgcgccagc cttgccgtag agatgttctg
     1261 ctatcgcatc cggaaataca tcggcgccta catcgcggtt ctcggcaggg tggatgccgt
     1321 cgtattcacc ggcggcatcg gggaaaacgc gtcggcgata agggaacgcg tgtgcagggg
     1381 gttggaacat atgggaatct ccatcgacga tcagaagaac gcttcggcgg gcagcagagt
     1441 taccgagata cagaaagacg gggcgtccat gaaggttctc gtgatccgga cggacgagga
     1501 atgggagatc gcgcggcaga ccgtccagac aatcgaaatc gccgagggaa ggcgtgacgt
     1561 ttccgcagaa aggtaaactg cacttggcgg agggaggttt ctcgcgatga acagggactg
     1621 gacccgggat gccgtttcgg cggaggaggc tgtcggactg ctccagagcg ggatgaacgt
     1681 cttcgtgcac ggagccgccg ccacccccgc gccgctgctc gactcgatgg tacggaggaa
     1741 ggagctggaa ggcatccgcc tctaccacat gcacacctcg ggagacgcac cgttcgtcgg
     1801 gcctggttgc gaggggcggt tcttctcgat ctcgctcttc accggcgccg ccctccggaa
     1861 accggtcgag gagggacggg cggacttcat gcccatcttc ctgtcggaca tcccggcgtt
     1921 gttccaatcc gggaccgtca agctggacgc cgcgctgctg caagtctccc ctcccgacgc
     1981 gcacggctgc tgcacgcttg ggacctccgt ggactccgcg aagtcggcgg cggatcacgc
     2041 ccgcgtcatc gtggccgaga tcaacgagca gatgccccgg acgcacggga acacggtggt
     2101 gccgttcgag cggatctccg ccttcgtcca caccgatcgc cccctcatcg agcaggcccc
     2161 cgagacggag
//
LOCUS       DATGYW010000247         1810 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_494986, whole genome shotgun sequence.
ACCESSION   DATGYW010000247 DATGYW010000000
VERSION     DATGYW010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_494986"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VK429_03415"
     CDS             <1..220
                     /locus_tag="VK429_03415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN90890.1"
                     /translation="EGLAPLIVSLLAEMILQIRKDGVTVLLAEQNLHFCAKVSDRAFV
                     IDKGSVKFEGTMKELLANDEIKEKYLAV"
     gene            210..1493
                     /locus_tag="VK429_03420"
     CDS             210..1493
                     /locus_tag="VK429_03420"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLN90891.1"
                     /translation="MPSDPGSFRDFAGRAFDTAAIPGKPEALAGVRVLEVATRIFGPA
                     TADYLGLFGAEVIKVEMPPRGDLMRYVAPEGFFWKEMSPAFLSLNRNKFHVGLDLHPT
                     EGKELFLRLAERSDVVVENLRAGTMDAWGVGYLQLRERNPRIVYAANSGFGQWGPFSA
                     GRASYDATAQAVSGFSAVTGFPDQPPMKAGFWVGDYTAALMSATAILAALAARRKTGV
                     GQMIDLSQAEAMIRTLDWTWPYAGLTGKDRARNGNVDPSYPPSGIYRCRDGFVAVSVR
                     DEDEMIPLAHALGATDPDEARIATPERVGAFCASRRVDEVVRIAEDAGFSAAPVRGGK
                     EQYHDPHLRARGTVCSVDDPLYGRVDEYGPAPKLSESPGRVKWSAKPVGWHNERVFGE
                     FLGMTAGEMEALARKKVIGTWADIPGARPPKGSAP"
     gene            1490..>1810
                     /locus_tag="VK429_03425"
     CDS             1490..>1810
                     /locus_tag="VK429_03425"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLN90892.1"
                     /translation="MSGFTGWAREATEPSAAAGKPEALSGIRVLEFCPGHFGGMVAAS
                     ILAEFGAEAIKVEPPDGDPLRLVAPEEILVAGTGLPFLSEARNRRFVTLDADDSAGRD
                     LFRRL"
BASE COUNT          274 a          594 c          663 g          279 t
ORIGIN      
        1 ggaagggctg gcgcccctga tcgtatccct gctggccgag atgatcctcc agatccgcaa
       61 ggatggggtg acggtcctcc tcgcggagca gaacctgcac ttctgcgcca aggtctcgga
      121 ccgcgccttc gtgatcgaca aggggtcggt gaagttcgag gggacgatga aggagctcct
      181 ggcaaacgac gagatcaagg aaaagtacct tgccgtctga ccccgggagt ttccgggact
      241 tcgccgggcg ggccttcgac accgcggcga tcccgggaaa gcccgaagcg ctcgccgggg
      301 tccgcgtcct ggaggtggcg acgcggatct tcgggccggc caccgcggac tacctcggcc
      361 tcttcggcgc cgaggtgatc aaggtcgaga tgccgccccg cggcgacctg atgcggtacg
      421 tggcccccga ggggttcttc tggaaggaga tgtcgccggc cttcctctcc ctgaaccgga
      481 acaagttcca cgtggggctc gacctgcatc cgaccgaggg gaaggagctc ttcctgcggc
      541 tcgcggaacg atccgatgtc gtcgtggaga atctccgcgc cgggacgatg gatgcgtggg
      601 gcgtcgggta cctccagctt cgcgagcgaa acccccggat cgtctacgcc gccaattcgg
      661 ggttcgggca atgggggccg ttctcggcgg gacgggcgtc gtacgacgcc accgcccagg
      721 ccgtctccgg tttctccgcc gtcacgggat ttccggacca gccgccgatg aaggcggggt
      781 tctgggtcgg ggactacacc gcggcgttga tgtccgccac cgcgatcctc gcggccctcg
      841 ccgcgcgccg gaagaccggg gtagggcaga tgatcgacct ttcccaggcc gaggcgatga
      901 tccgaacgct cgactggacg tggccgtacg ccgggttgac gggaaaggac cgcgcgcgga
      961 acgggaacgt cgacccctcg tatcctcctt ccgggatcta ccgctgccgc gacgggttcg
     1021 tcgcggtctc cgttcgggac gaagacgaga tgatccccct cgcgcacgcc ctgggggcca
     1081 ccgatccgga cgaggcacgg atcgccaccc cggaacgcgt gggtgcgttc tgcgcctccc
     1141 ggagggtcga cgaggtcgtc cggatcgcgg aggacgccgg gttctccgcg gcgccggtgc
     1201 gtggagggaa ggagcagtac cacgacccgc acctgcgggc ccgcgggacg gtctgttcgg
     1261 tcgacgatcc cctctacggc cgcgtggacg agtacggtcc ggcgccgaag ctgtcggaga
     1321 gcccgggaag ggtcaagtgg agcgcgaaac ccgtggggtg gcacaacgag cgggtcttcg
     1381 gggaatttct ggggatgacc gccggggaga tggaggcgct cgcccggaag aaggtgatcg
     1441 ggacgtgggc cgacatcccc ggcgcccggc ctccgaaggg aagcgcgcca tgagcgggtt
     1501 cacggggtgg gcgcgggagg cgacggaacc ttcggccgcg gcggggaagc ccgaggcgct
     1561 ctctgggatc cgggtcctcg aattctgtcc cggccacttc ggggggatgg tggccgcctc
     1621 gatcctggcg gaattcggcg ccgaggcgat caaggtggaa cctcccgatg gcgatccgct
     1681 ccgcctcgtg gcgcccgagg agatcctggt ggccgggacg gggctcccct tcctctccga
     1741 ggcgcgcaac cgccgcttcg ttaccctcga cgccgacgac tccgccgggc gggacctctt
     1801 ccggcgcctc
//
LOCUS       DATGYW010000248         2014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_237218, whole genome shotgun sequence.
ACCESSION   DATGYW010000248 DATGYW010000000
VERSION     DATGYW010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237218"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..762)
                     /locus_tag="VK429_03430"
     CDS             complement(<1..762)
                     /locus_tag="VK429_03430"
                     /inference="COORDINATES: protein motif:HMM:NF015739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HLN90893.1"
                     /translation="MIEYRAYHKTRHGRGRNAGRTVRKKEKGRAGTPPPSRARLRLIG
                     WLAAGLLAVGSTGVAFASAYSWLTHSPLFTVRTVDMNRCSNVSLEEVWAIVRGDGSGL
                     LWSVPAKEVARRLSGHPWVRSVSVRKSFPDRLVVRIEERTPVAMVNLDVLHYLDEEGR
                     PFKRLTAYDPKNLAIVTGFSRKDLLRKDPVTVRDLRKTLDLLRGVEAGALRQNVSEIH
                     FDAQDGYTVVTRDAGLQLKVGTMDVKEAVRRIEAAM"
     gene            complement(763..1692)
                     /locus_tag="VK429_03435"
     CDS             complement(763..1692)
                     /locus_tag="VK429_03435"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011341953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HLN90894.1"
                     /translation="MSELYAFTGRKVGVFLGGVSAEREVSLRTGAAAAAALRRLGCDV
                     REIDIREDWLGTIRGAGVDVAFLALHGRFGEDGCIQAACELARLPYTGSGVAASAIAM
                     SKVLGKRVAASAGVPCAPDAVYEGADRAGAKPPDFGFPLVVKPDREGSTVGITIVRGP
                     DQWEAALAEAAKHDTRILAEGFIPGREITVGILNGKVLPAIEIVPKSGFYDYQSKYTA
                     GRTEYVIPVPMDRDILLRAAEYTRRAARVMGLRGAARLDYRIDPAGNVFFLEANTIPG
                     MTETSLLPKAAKFDGLSFDDLVAAILSDAGLGK"
     gene            complement(1685..>2014)
                     /locus_tag="VK429_03440"
     CDS             complement(1685..>2014)
                     /locus_tag="VK429_03440"
                     /inference="COORDINATES: protein motif:HMM:NF014872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylenolpyruvoylglucosamine reductase"
                     /protein_id="HLN90895.1"
                     /translation="REAVFEQMRQFNEKRRASQPWGERTFGSAFRNPPEGEGKARELL
                     ERAGMKGEREGDACFSEKHANFLVNRGRATAADVRRLLSRGQSAVRVSCGVLLLPEVK
                     MWGDFDV"
BASE COUNT          297 a          747 c          655 g          315 t
ORIGIN      
        1 catggccgcc tcgatccggc ggaccgcttc cttgacgtcc atcgtgccga ccttgagctg
       61 cagcccggcg tcccgggtca ccaccgtgta gccgtcttgc gcgtcgaaat ggatctcgga
      121 gacgttctgt cgaagcgcgc ccgcctcgac gccccgcagc aggtcgagcg tcttccgaag
      181 atcccggacc gtcaccgggt ccttccgcag gaggtccttc cgcgaaaatc ccgtgacgat
      241 ggcgaggttc ttcgggtcgt acgcggtcag tcgtttgaat gggcggccct cctcgtcgag
      301 gtaatggagg acgtccaggt tcaccatggc gaccggcgtg cgctcctcga tccgcaccac
      361 caggcggtcc ggaaaggact tgcggacgga gacggagcgg acccaggggt gtccggacag
      421 gcgccgcgcg acctctttcg ccgggacgga ccagaggagg cccgatccgt ctccgcggac
      481 gatcgcccac acttcctcga gcgagacgtt cgagcaccgg ttcatgtcga cggtgcgcac
      541 cgtgaagagc ggcgagtgcg tgagccagga gtaggcggag gcaaacgcca cgccggtgga
      601 ccccacggcg agcaggccgg cggccagcca cccgatcagg cgcagccgcg cccgcgacgg
      661 cggaggcgtg ccggcccgac ccttttcctt cttccgcacg gtccgcccgg cgtttcgccc
      721 ccttccgtgg cgggtcttgt ggtatgcgcg gtactcgatc atctattttc cgagccccgc
      781 gtcggaaagg atggcggcaa cgaggtcgtc gaaggacagg ccgtcgaact tcgccgcctt
      841 ggggaggagg ctcgtctcgg tcatccccgg gatcgtgttc gcctccagga agaagacgtt
      901 ccccgccggg tcgatgcggt agtcgagccg cgcggccccc cgcagcccca tcacccgggc
      961 ggcgcgccgc gtgtactccg cggcgcggag gaggatgtcc cggtccatcg gaaccgggat
     1021 cacatactcc gtccggcccg cggtgtactt ggactggtag tcgtagaagc cggacttcgg
     1081 gacgatctcg atcgcgggga ggacctttcc gttcaggatc cccacggtga tctcccggcc
     1141 ggggatgaac ccctccgcca gaatccgggt gtcgtgcttc gccgcctcgg caagcgcggc
     1201 ctcccactgg tccgggccgc ggacgatcgt gatgccgacg gtggaccctt cccggtcggg
     1261 cttcaccaca agggggaagc cgaaatcggg cggtttcgcc cccgcgcgat ccgccccctc
     1321 gtagaccgcg tccggcgcgc acggcacgcc cgccgatgcg gccacccgct tcccgagcac
     1381 cttgctcatc gcgatggccg aggcggcgac cccggacccc gtgtacggga gccgggcgag
     1441 ttcgcacgcg gcctggatgc agccgtcctc cccgaaccgc ccgtgcaggg cgaggaacgc
     1501 gacgtcgacg cccgcgcccc gaatcgtccc cagccagtcc tcccggatgt cgatctcgcg
     1561 gacgtcgcac ccgagtctcc gcagcgccgc ggcggcggcc gctcccgtcc ggagggagac
     1621 ctcccgctcc gcggaaaccc ctcccaggaa cacgcccact ttcctcccgg tgaatgcgta
     1681 cagttcagac atcgaagtcc ccccacattt tcacctcggg caggagcagg acgccgcagg
     1741 acacccgcac cgcgctctgg ccgcgggaca ggagccgccg gacatccgcc gcggtggcgc
     1801 gtccccggtt cacgaggaag tttgcgtgct tctcggagaa gcaggcgtcc ccttcccgct
     1861 cgcccttcat ccccgcccgc tcgagcagct ccctggcctt tccctcgccc tcgggaggat
     1921 tgcggaacgc ggacccgaag gtcctctctc cccacggctg gctggcacga cgcttctcgt
     1981 tgaactgccg catctgctcg aacacggcct ccct
//
LOCUS       DATGYW010000249         2702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_495052, whole genome shotgun sequence.
ACCESSION   DATGYW010000249 DATGYW010000000
VERSION     DATGYW010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2702
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_495052"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2287
                     /locus_tag="VK429_03445"
     CDS             <1..2287
                     /locus_tag="VK429_03445"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN90896.1"
                     /translation="EEDFFGREEELSALTRAALEGSRGIGSSFMIYGPPNIGKTSLLL
                     KLAKVLGASAGGEGLPRPFPLYFSFSQILSHPLALSQHFLQEFLSQLLRFLGDAHPSA
                     FDPSAMSDRLASFGVTGCREVLTAHERCTADGDGLSALVNALSFPFSASGELFYPVFL
                     FDDFQYTAKLQAVPEGAMLSILRPYIKSGHFPMFLSGSSPGRVTAALKREGLFGTFQM
                     IEVGGLSNASSVRLWGHLCERRRVDIPASLLSRASERLGGIPTYQRMLVEEIFFRGAK
                     VPDAVTLENLYAVSVTEGKLNRYWREFFENTFPDRGQRGRAIRFLKRILCDRFPLDTM
                     EGAISLMGVSEEEGEAILSALEFKGLLKADLDQITFLGDPVLTDFLYWAFERGVLGKG
                     TSQVAAAIVQARLSCTAPEPGQGGDHARRVAIVKELMRKWDLREVPLLLLDFGMFREK
                     FGGKGLLEVVIGMEREAVRVRLPKVSSVSTGYRASRGGPRFDFDLVAYGFLDSDFSEE
                     NLVIWAVDAAVEKNLGARAVEHFENRCRLLALEKGLPHDRLRKWMIINETTDPAAVDL
                     ASRYGIHLSHPTQLRLFLNLFGLEELEREPEPARTEGAEAPRAGKTLEYELVLPIKAD
                     SEVVAARVAEEVAAFAAVDADTVDRIKMAIIEACINAFEHSASVSGKVRLRYLLSPDK
                     IELFVQDDGKGFRTGKTPEESKKNRGWGLKLIRELVDDVEIITGPDGTVVHMVKHLGG
                     DPANPGIAGHGEGGSASPGER"
     gene            2287..2643
                     /locus_tag="VK429_03450"
     CDS             2287..2643
                     /locus_tag="VK429_03450"
                     /inference="COORDINATES: protein motif:HMM:NF013868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HLN90897.1"
                     /translation="MSPHRTIQIREEGDTLVVCVGGYLNSLLGEEVEKVVRAKLDDGV
                     RRILINFQSTRLVNSIGISFVIGIVEKVMEQEGRMAFCALSRINCDLFRVTGLAKYVR
                     SFETEKEALDYLSGNA"
BASE COUNT          443 a          850 c          925 g          484 t
ORIGIN      
        1 ggaagaagat tttttcgggc gcgaggaaga actgtccgcc ctgacgcgcg cggcgttgga
       61 gggaagccgg ggcatcggct cctccttcat gatctatgga ccgccgaaca tcggcaagac
      121 gtcgctgctc ctcaaactgg cgaaggttct gggggcatcc gctggaggag aggggcttcc
      181 ccgcccgttc ccgctctact tctccttcag ccagatcctt tcgcacccgc tggcgctctc
      241 ccagcatttc ctccaggagt ttctatcgca attgctccgg ttcctcgggg acgcgcaccc
      301 ttcggccttc gacccctcgg cgatgtccga ccgcctggcc tccttcgggg tcacggggtg
      361 cagggaggtg ctcacggccc acgagcggtg caccgccgat ggggacggcc tctccgcgct
      421 cgtcaacgcc ctctcgtttc cgttctcggc gtcgggggag ctcttctatc cggtattcct
      481 cttcgacgac ttccagtata cggcgaaact ccaggccgtg cccgaagggg cgatgctttc
      541 catccttcgt ccctacatca agtccggcca cttcccgatg ttcctctcgg gctcctcgcc
      601 cggtcgcgtc accgcggccc tcaagcgcga ggggctcttc ggcaccttcc agatgatcga
      661 ggtgggcggg ctctcgaacg cctcctccgt ccgcctgtgg gggcatctgt gcgagcggcg
      721 ccgcgtcgat atcccggcgt ccctcctttc ccgcgcttcc gagcggctcg gcgggatccc
      781 gacctaccag cggatgctcg tcgaagagat cttcttccgg ggggcgaagg tacccgacgc
      841 ggtcaccctc gagaatcttt acgcggtctc cgtcacggag gggaagctca accggtactg
      901 gagggagttc ttcgagaaca cgttcccgga ccgcgggcag cgagggcggg cgatccggtt
      961 cctcaaacgc atcctctgcg accgtttccc gctcgacacg atggagggcg cgatctccct
     1021 gatgggtgta tccgaggagg agggggaagc gatcctctcc gccctcgaat tcaagggtct
     1081 tctgaaggcc gacctcgatc aaatcacgtt cctcggggac ccggtgctga ccgatttcct
     1141 gtactgggcg ttcgagcgcg gcgttctcgg gaaggggacg tcgcaggtgg cggccgcgat
     1201 cgtgcaggcg cggctctcct gcacggcgcc ggagccgggg cagggaggcg accacgcgcg
     1261 acgcgtcgcg atcgtgaagg agttgatgcg gaagtgggac ctgcgggagg tgccgctcct
     1321 gctcctcgac ttcgggatgt tccgcgagaa gttcggggga aaggggctgc tcgaagtcgt
     1381 catcggaatg gagcgcgagg cggttcgagt ccgtctgccg aaggtctcct ccgtctcgac
     1441 ggggtaccgc gcaagtcggg gagggccgcg cttcgacttc gacctggtcg cgtacgggtt
     1501 cctcgacagc gacttctccg aggagaacct cgtcatctgg gcggtcgacg ctgcggtcga
     1561 gaagaacctc ggcgcccgcg ccgtcgagca tttcgagaac cggtgccggc tcctcgcgct
     1621 cgagaagggg ctgccgcacg accggctccg gaagtggatg atcatcaacg aaacgacgga
     1681 ccctgcggcg gttgacctgg catcgcggta cggcatccac ctttcccacc cgacgcagtt
     1741 gcggctcttc ctcaacctgt tcgggctcga ggaactggag cgggagcccg agcctgcacg
     1801 caccgaaggc gccgaggcgc cgcgtgccgg gaagacgctg gagtacgagc tggtcctgcc
     1861 gatcaaggcc gactccgagg tggtcgcggc gcgggtcgcg gaagaggtcg cggccttcgc
     1921 cgccgtcgac gccgacacgg tggaccgcat caagatggcg atcatcgagg cgtgcatcaa
     1981 cgccttcgag cacagcgcat ccgtatccgg gaaggtccgg ctgcggtacc tcctctcccc
     2041 cgacaagatc gaacttttcg tgcaggatga cggaaagggg ttccggacgg ggaagacgcc
     2101 ggaggagtcg aagaagaacc ggggatgggg gttgaagctg atccgcgaac tggtcgacga
     2161 cgttgagatc atcacggggc cggacggcac cgtcgtccac atggtgaagc atctcggggg
     2221 ggatcccgcg aatccaggga tcgccgggca tggggagggg ggatccgcgt cccccgggga
     2281 gcgctgatgt caccgcacag gacgatccag atccgggagg agggggacac cctggtggtg
     2341 tgcgtcggcg ggtacctgaa cagcctgctg ggcgaggaag tggagaaggt ggtccgcgcg
     2401 aagctcgacg acggcgtccg gcggatcctg atcaacttcc agagcacgcg gctggtcaac
     2461 agcatcggga tctcgttcgt aatcggaatc gtcgaaaagg tgatggagca ggaaggccgg
     2521 atggccttct gcgcgttgag ccggatcaac tgcgaccttt tccgcgtgac gggcctggcg
     2581 aaatacgtcc gttccttcga gaccgaaaag gaggcgctgg actacctgtc tggaaacgct
     2641 tgagcgtcct gctgcatcgc ctcggagggc ggggctccgt tcgtggctcg ccgtgcgatg
     2701 aa
//
LOCUS       DATGYW010000250         1776 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_125646, whole genome shotgun sequence.
ACCESSION   DATGYW010000250 DATGYW010000000
VERSION     DATGYW010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125646"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /locus_tag="VK429_03455"
     CDS             complement(<1..515)
                     /locus_tag="VK429_03455"
                     /inference="COORDINATES: protein motif:HMM:NF023169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HLN90898.1"
                     /translation="MMTPLRHSGRSRWPRALQGMVAMALACAILVPVAIAAEPAGPGD
                     VQSAGANGAKIREVTVSKSPYNTTINASVDGVIENYNSFKLNDPFRIVVDVWGVGQGT
                     AASEIPVGTPEVKAVKISSVDRKLRMVVETPGDKPMPFIVSAEKGMLVLSVGGGTEGK
                     VTSTERLQDGTA"
     gene            complement(515..1066)
                     /locus_tag="VK429_03460"
     CDS             complement(515..1066)
                     /locus_tag="VK429_03460"
                     /inference="COORDINATES: protein motif:HMM:NF016254.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HLN90899.1"
                     /translation="MRPSPVRHLSLAFGILATVSLFAGGIGCSKEPAAPQPVVKRQAP
                     KPEAKAPEAKAAEAQAKKVEQVALYDPRGKRDPFVSFIKGEERRKTGIDTASLPPLQR
                     YDLGELKFVGVIWTKKGARGLVEDAEGKGYSVTVGTRIGRSGGVVSRITGKEIFVKEV
                     FVGNRGEKIVKESGIQLTTAGGK"
     gene            complement(1063..1680)
                     /locus_tag="VK429_03465"
     CDS             complement(1063..1680)
                     /locus_tag="VK429_03465"
                     /inference="COORDINATES: protein motif:HMM:NF016253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HLN90900.1"
                     /translation="MALKLDDLSKVPPRQKILLAVLFCGLVVTGYYYLYYREASQRIG
                     ALETQLAGLQSKIREQQAIAGNLRSFQDEVRRLEGQLSLLLEQLPNSAEIPSLLKSVS
                     DLGKESGLEFLRFAPSGEIKKDFYAEIPVAISVNGDYHSFALFTDKVAHYPRIVNLSN
                     ITFSSPKPSGDNLVLVTVNCTATTYRFLEQQAAPAPGAGDQGKKK"
BASE COUNT          290 a          600 c          542 g          344 t
ORIGIN      
        1 gccgtcccgt cctggagtcg ctcggtgctg gtaaccttcc cttccgtgcc gcccccgacg
       61 gacagcacga gcattccctt ctcggcgctg acgatgaacg gcatcggctt gtcgcccggg
      121 gtctccacca ccatccgcag cttccggtca acggaggaga tcttcaccgc cttgacctcg
      181 ggggtcccca ccgggatctc ggaggccgcc gtcccctgcc ccactcccca gacgtccacg
      241 acgatccgga acggatcgtt cagcttgaag gagttgtagt tctcgatcac cccgtcgacc
      301 gacgcattga tcgtcgtgtt gtagggcgac ttcgataccg tcacctccct gatcttggcg
      361 ccgttagccc cggcggactg cacgtcgccc gggccggcag gctccgcggc gatcgcgaca
      421 ggcaccagga tcgcgcaggc aagcgccatc gccaccatcc cctggagggc gcggggccag
      481 cgggatctgc ccgaatgccg taacggggtc atcattattt tcctcctgcc gtggtgagct
      541 ggattccgct ctccttcacg atcttttccc cccggttgcc gacgaacact tccttcacga
      601 aaatctcctt cccggtgatc cggctgacga cgccgccgga gcggccgatc cgcgttccca
      661 ccgtcacgga gtaccccttc ccctcggcgt cctccacaag gccccgcgcg cccttcttcg
      721 tccagatgac gccgacgaac ttcaactcgc ccaggtcgta ccgctgcagg ggcgggagcg
      781 acgcggtgtc gatccccgtc ttcctgcgct cctcgccctt gatgaacgaa acgaacgggt
      841 cccgtttccc acgggggtcg tagagagcga cctgctcgac ctttttcgcc tgtgcctccg
      901 ccgctttcgc ttccggggcc ttcgcctcgg gtttcggcgc ctgcctcttc accaccggct
      961 gcggagccgc cggttccttg gagcagccga tcccgccggc gaagagggaa accgtggcga
     1021 ggatcccaaa agcaagggag aggtgtcgca cgggagaggg cctcattttt tcttcccctg
     1081 atcccccgcc ccgggagcgg gtgctgcctg ctgctcgagg aagcggtagg tcgtggccgt
     1141 gcagttgacg gtcaccagga cgaggttgtc tccggacggt tttggagagg aaaaggtgat
     1201 attggacagg tttacgatcc gggggtaatg cgccaccttg tcggtgaaga gggcaaagct
     1261 gtgatagtcg ccgttgacgg agatcgccac ggggatctcg gcgtagaaat ccttcttgat
     1321 ctcgccggag ggggcgaaac gaaggaattc gagccccgat tccttcccga gatcggaaac
     1381 gctcttcagc agggagggga tctccgccga gttcggaagc tgctccagca ggagcgacag
     1441 ctggccctcg agcctgcgga cctcgtcctg gaaggaacgc aggttcccgg cgatcgcctg
     1501 ctgctcgcgg atcttgctct gaagacccgc cagctgggtc tccagcgcgc cgatccgctg
     1561 ggacgcttcc cgatagtaca ggtagtagta tcccgtgacg acgaggccgc agaacaggac
     1621 ggcaagcagg atcttctgcc ggggcggcac cttcgaaaga tcgtcaagtt ttagcgccat
     1681 tccgtatcct ctcccgggga tggggcgttc agttgaccgc ctggaacgtc aagttgaact
     1741 tcacgagttt cacgcccgcc accgtcgcct gctcgg
//
LOCUS       DATGYW010000251         1777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_75405, whole genome shotgun sequence.
ACCESSION   DATGYW010000251 DATGYW010000000
VERSION     DATGYW010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1777
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75405"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..1381
                     /locus_tag="VK429_03470"
     CDS             176..1381
                     /locus_tag="VK429_03470"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012647842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cofactor-independent phosphoglycerate mutase"
                     /protein_id="HLN90901.1"
                     /translation="MGGKSIILIGDGMADWPIPAIGNRTPLEAAEKPNMDFMAANGAV
                     GMVQVVPKEMYPGSDVSNLSILGYDPAVVYTGRSPLEAASIGISLGPDDVAVRCNVVA
                     LKNDGADSEMEDFSAGHISTSKAAELLASLQEAVVDKGVRFHTGVSYRHLMIWPGGFD
                     GVKTTPPHDIHGKKITRYLPQGDGAEFLLTIMEISREVFSDHPVNRKRAASGKLPGNS
                     VWLWGQGKAPRIPTFEVKFGLTGSVVAAVDLIKGIGIYAGLEVIAVPGATGYTDTNYR
                     GKAEYALRELDRKDFVLIHVEAPDEAGHNGSVEEKIRAIERIDREMLTPLLARVREKG
                     DLRILLLPDHPTPVAIRTHAQEPVPFVFYPAPPGLSTTPGKRYTEADGRDSGQFVPAG
                     TKLIEYLLA"
     gene            1450..>1777
                     /locus_tag="VK429_03475"
     CDS             1450..>1777
                     /locus_tag="VK429_03475"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HLN90902.1"
                     /translation="MEHVATVRVIFGDTDAAGIAYYGNYLRWFEVGRAELMRRKGFSY
                     LDTMERGILLPVIEAGARYHASARYDDMLRIHAEIRDVRGVRLTFGYRIERDDGTRLV
                     TGHTVHA"
BASE COUNT          328 a          570 c          595 g          284 t
ORIGIN      
        1 tgataaaatt ggcaaccgag ggatttttcc gggcggggca gcgactcgtt tgcacgctga
       61 ccgggcacgg cctgaaggac ccggacaacg ccatcgcgca gtcggtcgcg cccgtgacga
      121 tccccccgaa tctcgcggac gtcctcaaga tcctcggttt ctgaaggaga cgacgatggg
      181 cgggaaatcc atcatcctga tcggcgatgg catggccgac tggccgatcc cggcgatcgg
      241 caaccgcacg ccgctcgaag ccgcggagaa accgaacatg gacttcatgg cggccaacgg
      301 cgccgtcggt atggtccagg tcgtcccgaa agagatgtac ccgggcagcg acgtgtcgaa
      361 cctgagcatc ctcggatacg accccgctgt cgtctacacc ggccgctcgc cgctcgaggc
      421 agcctccatc ggcatctccc tgggaccgga cgacgtcgcg gtccgctgca acgtggtggc
      481 gctgaagaac gacggggccg actccgagat ggaggatttc tcggcaggtc atatctccac
      541 ctccaaggcg gcggagctcc tcgcctctct ccaggaggcg gtcgtcgaca agggggtccg
      601 gttccacacg ggagtgtcgt atcgccacct gatgatctgg cccggggggt tcgacggggt
      661 gaagacgacc ccaccgcacg acatccatgg gaagaagatc actcgctacc ttccccaggg
      721 ggacggcgcg gaattcctcc tgacgatcat ggaaatctcc cgcgaagtgt tctctgacca
      781 cccggtgaac cggaagaggg cagcgtccgg gaagcttccg ggcaactcgg tctggctctg
      841 ggggcagggg aaggctcccc gtatccccac attcgaggtg aagttcggcc tgaccggatc
      901 cgtggtcgcc gcggtggacc tcatcaaggg gatcgggatc tacgcggggc tcgaagtgat
      961 cgccgttccg ggcgccaccg ggtacaccga cacgaactac cgtggaaaag cggagtacgc
     1021 cctccgcgag ctcgaccgga aggacttcgt cctgatccac gtggaggccc ccgacgaggc
     1081 cggacacaac ggatccgtcg aggagaagat ccgcgcgatc gagcggatcg accgggagat
     1141 gctgaccccg ctccttgcga gggtacggga gaagggggat ctgcggatcc tcctgctgcc
     1201 ggaccatccg acccccgttg cgatccgcac ccacgcgcag gagccggttc cgttcgtctt
     1261 ctacccggcg cccccgggcc tgtccacgac cccggggaag cggtacacgg aagccgacgg
     1321 ccgcgattcc ggacagttcg tcccggcggg gaccaagctg atcgaatacc tgctcgcctg
     1381 acgggggttc gccccaatac gagctttgcg ctgttggggt acccccccag gaggaagaac
     1441 ggggggcacg tggagcatgt cgccaccgtc cgggtgatct tcggtgacac ggatgccgcc
     1501 ggcatcgcct attacgggaa ttacctccgc tggttcgagg tcggccgggc ggagttgatg
     1561 cggcgaaaag ggttttcgta cctcgacacg atggagcggg ggattctgct ccccgtcatc
     1621 gaggcgggtg cccgatacca cgcatccgcg cggtacgacg acatgctccg gatccatgca
     1681 gagatccggg atgtccgggg ggtgcgcctg acgttcggct accggatcga gcgggacgac
     1741 gggaccagac tggtaacggg gcacaccgtg cacgcat
//
LOCUS       DATGYW010000252         1729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_173001, whole genome shotgun sequence.
ACCESSION   DATGYW010000252 DATGYW010000000
VERSION     DATGYW010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1729
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173001"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..912)
                     /locus_tag="VK429_03480"
     CDS             complement(<1..912)
                     /locus_tag="VK429_03480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012646636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-4-keto-pentose/UDP-xylose
                     synthase"
                     /protein_id="HLN90903.1"
                     /translation="MKVLILGVNGFIGHHLTARILKETDWKIYGMDLSAERLGKSADH
                     PRFDFVEGDISINKEWIEYHIKKADVILPLVAIATPKVYVERPLSVFELDFEENLRIV
                     RQVHRYGKRIVFPSTSEVYGMCADKEFDEENSPLVLGPIAKERWIYSCCKQLLDRVIW
                     AYGRQGLAFTLFRPFNWIGPRLDSIETAKEGSSRVVTQFIADLYLGKPIQVVDGGAQR
                     RCFTYVDDGIAGLMKILANRDGCANGGIFNIGNPANDHSVRELAGMLRELYAKHPRNH
                     GKKVPPIIEVNSQQFYGEGYQDIQTRTP"
     gene            complement(909..1724)
                     /locus_tag="VK429_03485"
     CDS             complement(909..1724)
                     /locus_tag="VK429_03485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012304017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HLN90904.1"
                     /translation="MPVFFPKDVNAPPWPDRIREAAPDLLFSFYYRSMLKKEILEIPP
                     LGAMNLHGSLLPKYRGRAPVNWVLVKGETETGVTLHFMTEKPDAGDIVGQAAVPIAFD
                     DTALTLFGKMEEAASRLLADLLPRIANGEIPRRPNDLAHGSYFGGRRPEDGRIDWSRP
                     AVEIYNLVRAVTRPYPGAFAEYAGEKLTVWWAIPLRAEAGSALSPGTLRVSGGPSYEM
                     AGGCVAPVSGPRRVVVETGDGWLQLEDIEWGTRTANGEGIVDLLAGAGNGRLS"
BASE COUNT          275 a          609 c          534 g          311 t
ORIGIN      
        1 gggggtccgc gtctggatgt cctggtaccc ctcgccgtag aactgctgcg agttgacttc
       61 gatgatgggg ggaaccttct tcccgtggtt ccgggggtgc ttcgcgtaga gctcgcggag
      121 catcccggcg agctccctga ccgaatggtc gttcgcgggg ttcccgatgt tgaagatccc
      181 tccgttcgcg cagccgtccc tgttcgcgag gatcttcatc agcccggcga tcccgtcgtc
      241 cacgtaggtg aagcagcggc gctgcgcccc gccgtccacc acctggatcg gcttcccgag
      301 gtacaggtcc gcgatgaact gcgtgaccac gcgggaactc ccctccttgg cggtctcgat
      361 cgagtcgagc cgcggcccga tccagttgaa ggggcggaag agggtgaagg caagcccctg
      421 gcggccgtac gcccagatga cccggtccag caactgcttg cagcacgagt agatccaccg
      481 ctccttggcg atcggcccga ggaccagcgg cgagttctcc tcgtcgaact ccttgtccgc
      541 gcacatcccg tacacctcgg aggtggaggg gaagacgatc cgcttgccgt accgatgcac
      601 ctgccggacg atgcgcaggt tctcctcgaa atcgagctcg aagaccgaca gcggccgctc
      661 gacgtagacc ttcggtgtgg cgatcgccac cagcggcagg atcacgtcgg ccttcttgat
      721 gtggtactcg atccattcct tgttgatcga gatgtctccc tcgacgaagt cgaaccgtgg
      781 gtggtccgcc gacttcccca gccgctcggc ggaaagatcc atcccgtaga tcttccagtc
      841 ggtctccttc aggatcctgg ccgtcaggtg atggccgatg aacccgttca ctcccaggat
      901 cagcaccttc atgaaagcct cccgtttccg gctccggcga gcaggtcgac gatcccctcg
      961 ccattcgccg tccgcgttcc ccattctata tcctccagtt gaagccaccc atcccccgtc
     1021 tcgacgacaa cccgccgagg tccggaaacc ggggcgacgc acccgcccgc catctcgtac
     1081 gacggcccgc cggaaacccg gagcgttccc ggagacagcg cgcttcccgc ctccgcccgc
     1141 agggggatcg cccaccacac cgtgagtttt tccccggcgt attccgcgaa cgcccccggg
     1201 taggggcggg tgaccgcgcg gacgaggttg tagatctcca ccgccggccg ggaccagtcg
     1261 atccggccgt cctcgggcct gcgcccgccg aagtagctgc cgtgggcgag atcgttcggg
     1321 cgccgcggga tctccccgtt cgcgatccgg ggaagcaggt cggccaggag cctcgaagcg
     1381 gcctcctcca tcttcccgaa cagcgtaagc gccgtgtcgt cgaaggcgat cggtaccgcc
     1441 gcctggccca cgatatcccc cgcgtcgggc ttctccgtca tgaagtggag ggtcaccccg
     1501 gtttccgtct cccccttcac gagcacccag ttgaccggcg cccttccccg gtacttcgga
     1561 agcagcgagc cgtggaggtt catcgccccc agcgggggga tctcgaggat ctcctttttc
     1621 agcatcgacc ggtagtagaa ggagaagagc aggtcggggg cggcctcccg gatccggtcc
     1681 ggccacggcg gcgcgttgac gtccttcggg aaaaataccg ggatccccc
//
LOCUS       DATGYW010000253         2270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_398540, whole genome shotgun sequence.
ACCESSION   DATGYW010000253 DATGYW010000000
VERSION     DATGYW010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398540"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..656)
                     /locus_tag="VK429_03490"
     CDS             complement(<1..656)
                     /locus_tag="VK429_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012258886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLN90905.1"
                     /translation="MAALTREGRPERVGWYFYDFANSAFSTTVVTVFTGPYLTSVARA
                     AADPAGYVHPFGIPVLAGSFFPYVVSLSVFFQVLLLPLLGAIADYSHRKKPMLFLFAY
                     AGSASTVGLYFLEGTRYLLGGGLFLLANVCFGASVVFYNAWLPDIAPPEDRDSVSSVG
                     WALGYLGGGILLLLNLILFSRARDFGLTGGEAVRISLASAGTWWAVFSLVPLATMRRR
                     "
     gene            complement(718..792)
                     /locus_tag="VK429_03495"
     tRNA            complement(718..792)
                     /locus_tag="VK429_03495"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(758..760),aa:Gly,seq:gcc)
     gene            complement(860..1432)
                     /gene="pgsA"
                     /locus_tag="VK429_03500"
     CDS             complement(860..1432)
                     /gene="pgsA"
                     /locus_tag="VK429_03500"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011735657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HLN90906.1"
                     /translation="MTSDSRLNAPNILTLLRILAIPVVVLILLPPAGREISFARSVAA
                     FSLFVVATITDLFDGYIARRYHMVTTLGKLLDPLADKLLVCAAMIMLIPPGRVPAWMA
                     VIVIAREIGVTALRGMASTEGVIIAASKLGKAKTLLLNIGVAALILHYPIFGVPVHGV
                     GMVFLSAGLVLTAWSGLDYFFRFVGEIFKR"
     gene            complement(1429..2016)
                     /locus_tag="VK429_03505"
     CDS             complement(1429..2016)
                     /locus_tag="VK429_03505"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HLN90907.1"
                     /translation="MVQLARIFILSFLLWPVVSGADIYRYMDGEGVIHYSNTQPDGKF
                     TLYLREGPNVAPRAPASSIPASSWMNGYVDRFSRANDLPPALIHAIIKAESNGQRKAV
                     SRKGAEGVMQLMPFTSKRMRVSDPFDPIENIEGGIKYIKELLVTFEGDLTNTVAAYNA
                     GPAAVRKYGGVPPYQETRIYVRRVMDLYRQYSAVE"
     gene            2086..>2270
                     /locus_tag="VK429_03510"
     CDS             2086..>2270
                     /locus_tag="VK429_03510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011939352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLN90908.1"
                     /translation="MGKVSKFLVIGSGIAGLSFALRAAKKGPVTIITKKEASESSTNY
                     AQGGIATVWSDEDTFES"
BASE COUNT          490 a          682 c          760 g          338 t
ORIGIN      
        1 tcccggcggc gcatcgtggc gagcggcacg agggagaaaa cggcccacca cgtccccgcc
       61 gaagcgaggc tgatgcggac cgcctcaccg cccgtcaggc cgaagtcgcg cgcacgggaa
      121 aagaggatca ggttcaggag aaggaggatc ccgcccccga ggtagccgag cgcccacccc
      181 acggaggaca cggaatcgcg gtcctccgga ggcgcgatgt ccggcagcca ggcgttgtag
      241 aagaccaccg aggccccgaa gcagacgttt gccagcagaa acaggccccc acccagcagg
      301 taccgcgtcc cttcgaggaa atagagcccg accgtcgacg cggatcccgc gtaggcgaag
      361 aggaacagca tcggcttctt ccggtgggag tagtcggcga tcgcccccag caacggcagg
      421 aggagcacct ggaagaagac ggagagggag acgacgtacg ggaagaacga cccggccagc
      481 acgggaatgc cgaacggatg gacgtacccc gcggggtcgg cggcggcgcg ggcgacggag
      541 gtaagatacg gtcccgtgaa caccgtgacg accgtcgtgg aaaaggccga attcgcgaaa
      601 tcgtaaaagt accagccgac ccgctcgggc cggccttccc tggttagcgc ggccaacggg
      661 tcctccgacg aaaaaccccc gaacgcaacg cggcggccgg gggttcgcag gatgaaatgg
      721 agcgggcgac gagatttgaa ctcgcgactt cgaccttggc aaggtcgcac tctaccactg
      781 agttacgccc gcatgacgaa cgtcgattgt aggcgaaccg cgcgcggctt gtcaagaaaa
      841 gccgccgcag cggcggacat taccgcttga atatttctcc gacgaaacgg aagaagtagt
      901 cgagcccgga ccaggcggtg agtaccagcc cggcgctcag gaacaccatc cccacgccgt
      961 ggaccggaac cccgaagatc gggtaatgga ggataagggc cgcgactccg atattgagga
     1021 gaagcgtttt agccttcccc aatttcgagg cggcgatgat caccccttcc gtcgaggcca
     1081 tcccgcgcag cgccgtgacg ccgatctccc gggcgatcac gatgaccgcc atccacgcag
     1141 ggacccggcc cggaggaatg agcatgatca tggccgcgca cacgagcagc ttgtcggcca
     1201 gcgggtcgag cagtttcccc agggtggtga ccatgtggta gcgccgcgcg atgtagccgt
     1261 cgaagagatc tgtgatcgtg gcgacgacga acagggagaa cgccgccaca gaacgcgcga
     1321 aggagatctc cctgcccgcg ggcgggagaa ggatgaggac caccaccggg atcgcgagga
     1381 tccgcagcag cgtcaggatg ttgggcgcgt tcagacggga gtcgctggtc attcgaccgc
     1441 ggaatattgc cggtacaggt ccatcacgcg gcgaacgtag atgcgggtct cctggtaggg
     1501 agggacgccg ccgtactttc ttaccgcggc cggcccggcg ttatatgccg cgaccgtgtt
     1561 ggtgaggtcc ccttcgaagg tgacgaggag ttccttgatg tacttgatcc cgccctcgat
     1621 gttctcgatg gggtcgaatg gatcggagac ccgcatccgt ttcgacgtga atggcatcaa
     1681 ctgcatcaca ccctcggccc ccttgcggga gacggccttg cgctgtccgt tcgattccgc
     1741 cttgatgatg gcgtgtatga gcgcaggtgg gagatcgttc gcccgggaga accggtccac
     1801 gtacccgttc atccagcttg acgcggggat cgaggatgcc ggtgcccggg gcgcgacgtt
     1861 cggcccctcc cgaagataga gcgtgaactt cccgtccggc tgggtgttcg agtagtggat
     1921 gacgccctcc ccgtccatgt atcgatagat gtccgcgccg gaaacgaccg gccagaggag
     1981 gaaagaaagg atgaaaatgc gggctaattg aaccataatt tatcattcta cggacaggac
     2041 cccgccgaag tcaaacaacg gtggcccgac gatgggggaa acgtcatggg aaaggtgtcg
     2101 aagtttcttg tgatcggcag cggaatcgcc ggattgagtt tcgcgctccg ggcggcgaag
     2161 aagggcccgg tcacgatcat caccaagaag gaggcgtccg agtcgagcac caactacgcg
     2221 cagggcggga tcgccaccgt ctggagcgac gaggacacct tcgagtcaca
//
LOCUS       DATGYW010000254         2805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_495332, whole genome shotgun sequence.
ACCESSION   DATGYW010000254 DATGYW010000000
VERSION     DATGYW010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2805
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_495332"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..846
                     /locus_tag="VK429_03515"
                     /pseudo
     CDS             1..846
                     /locus_tag="VK429_03515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011343506.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
     gene            848..2182
                     /locus_tag="VK429_03520"
     CDS             848..2182
                     /locus_tag="VK429_03520"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011698201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLN90909.1"
                     /translation="MDRGKTPADRPGELFDRGKLFDKPEPLKDVRVLEVCSVVLGPAT
                     CDYLAEFGAEVIKFEGRKGDQMRYVTPYAYFWKGMSPGLEIENHNKYWVGMHVGNPKA
                     KAIFLELVKKSDVVVDNLTPGRMSEWGLDYRTLREVNPKIIQLHVSGYGSWGPWTGRT
                     SYDAVAQSMGALASITGFEDRGPLKSGVWIADWITGLMCANAILSALNYRERTGEGQF
                     IDYLQVENVIRLLDWTWLYSFKTGEDRKRSGNRDLAICPSDLFDCLDGQVALAAFSEG
                     EFRGLCEAMGQMDLHERFHDPLTRLRDGNARELLDRIAVWAVSRRVEEVEALASRHGF
                     AAARVLEAKDVYHSNHFRERGAIQEYEDPLYGNMVQQCYPPVLSETPARLKWSCRPLG
                     FDNGYVLGKMLGLPEEEVKTLEDAGVVFRWNPGVPSQCPPPGWDGSSGVKTP"
     gene            2226..>2805
                     /locus_tag="VK429_03525"
     CDS             2226..>2805
                     /locus_tag="VK429_03525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010878474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLN90910.1"
                     /translation="MDDSNIVGLSANREYARWAHRETNPGEIPGKPEALDDILVLDLS
                     HANFAGLFASSLLAEMGAEVVRIEPPGGDLARKMTPYGMMIGDAGLGYIVEGRNKHHI
                     TLDIAREEGRKLLLGLARKADVLIHTFKPGHLEALGLGYGPLSEANPGLIFTAIHTYG
                     QFGGDSEKCSNQPDYDIVDQARGVIMSVTGEPD"
BASE COUNT          553 a          822 c          976 g          454 t
ORIGIN      
        1 ctgtacaacg caccgttcga cgcgaagaag gggctcgaac tgctggagcg gtgcgagatc
       61 acggtccttt gcgccccgcc gacggcgtat cgggcgttcg tcagggagga cctatcccgc
      121 tataaccttt cgaagcttcg ccactgcgtg ggcgcagggg agcctctcaa tcccgaggtc
      181 atcaagacct ggagcgaggc gtatggtctc acgatccacg acgggtacgg ccagacggag
      241 acgatcaatc tggtggcgaa ctaccccgga atccccgtga agcccggttc gatggggctc
      301 cccacccccg gccacgacgt tgcggtgatc gacgacaggg gggacgaagt cccgccgggg
      361 gagatcggcg agatcgcggt gaaagggcgg ccgccctcga tcttcatcgg gtactggaag
      421 gactaggaga agaccaggga atgtttccgc ggtgactggt acctgaccgg ggaccgcgca
      481 tatcgggacc aggacggcta cttcttcttc gtcggccgcg gggacgacgt catcatttcc
      541 gcgggatacc gcatcggccc gttcgaggtg gaaagcgccc tcctcgagca ccccgcggtc
      601 gtggaatccg cggtggtgtc ctcccccgac gagctgcggg gcgagatcgt gaaggcgtac
      661 gtcgtcctcc ggaaagggta cgaggcgtcc gacgccttga agaaggagct gcaggaccac
      721 gtgaagaagg tcaccgctcc gtacaagtac ccgcgggata tcgtgttcgc gaaagagctg
      781 ccgaagactt cttcggggaa gatccggcgc gtggagctgc gcaatgccga gtggaagcgg
      841 acctgacatg gatcggggga aaacgccggc ggaccgcccg ggggagctgt tcgacagggg
      901 aaagctcttc gacaagccgg agccgctgaa agacgtgcgg gtactcgagg tctgctccgt
      961 cgtcctcggg cccgccacgt gcgattacct ggcggagttc ggcgcggagg tgatcaagtt
     1021 cgaggggcgg aagggggacc agatgcggta cgtgaccccc tatgcctact tctggaaggg
     1081 gatgtcgccg ggactggaga tcgagaatca caacaaatac tgggtcggga tgcacgtagg
     1141 gaacccgaag gccaaggcga tattcctgga gctcgtgaag aaatcggacg tggtcgtcga
     1201 caacctgacc cccgggagaa tgtcggagtg gggtctggat tacaggaccc tgcgggaagt
     1261 gaatccgaag atcatccagc tgcacgtttc cggctacggg agctgggggc cgtggaccgg
     1321 gagaacttcc tacgacgccg tggcccagag catgggcgcc ctcgcctcga tcacgggctt
     1381 cgaggaccgg ggcccgctca agtcgggggt ctggatcgcc gactggatca ccggcctcat
     1441 gtgcgccaac gcgatcctgt ccgccttgaa ctacagggaa aggaccggtg aggggcagtt
     1501 catcgactat ctccaggtgg agaacgtcat ccggctgctc gactggacct ggctctactc
     1561 gttcaagacg ggtgaagaca ggaagcggtc gggaaaccgg gacctggcga tctgcccatc
     1621 ggatcttttc gactgcctcg acgggcaggt ggcgctcgcg gcgttcagcg agggggagtt
     1681 tcgcggcctg tgcgaggcga tggggcagat ggacctgcac gaacggttcc acgatcccct
     1741 gacgcgattg agggacggga acgcaaggga actgctcgat cggatcgccg tctgggcggt
     1801 aagccgtcgc gtggaggaag tggaggcgct tgcctcccgc cacggtttcg ccgccgcccg
     1861 cgttctggaa gcgaaggatg tctaccacag caaccatttc cgggagcgcg gcgccatcca
     1921 ggagtacgag gacccccttt acgggaacat ggtccagcag tgctatcccc ccgtgctgag
     1981 cgaaaccccc gccaggttga agtggagctg ccggccgttg gggttcgata acggatacgt
     2041 actcgggaag atgctcggac ttccggagga ggaagtgaaa acgctcgagg acgcgggtgt
     2101 cgtgttccga tggaatccgg gcgtcccgtc gcaatgcccg cctcccggct gggacgggag
     2161 ttccggagtc aagactccct gaagcggcag gaagaatccg gggacgacgg agggaaggcg
     2221 gaaaaatgga cgattcgaac atcgtcggcc tgtcggccaa tcgggaatac gccaggtggg
     2281 cgcatcgtga aacgaacccc ggggagatcc ccgggaagcc ggaagccctc gacgacattc
     2341 tcgtcctgga tctgagccac gcgaacttcg ccgggctctt cgcctcttcc ctgctggcgg
     2401 agatgggggc ggaggtcgtc cgcatcgagc cccccggagg ggatctcgcc cggaagatga
     2461 ccccgtacgg gatgatgatc ggcgacgcgg ggctgggcta catcgtggag ggacggaaca
     2521 agcaccacat caccctcgac atcgccaggg aggaggggag gaagcttctt ctgggcctcg
     2581 cgaggaaagc cgacgtgctg atccacacct tcaagcccgg gcatctcgag gccctcgggc
     2641 tggggtacgg tcccctcagc gaagccaacc ccgggctgat cttcaccgcg atccatacgt
     2701 acggacagtt cggcggcgat tcggaaaagt gttccaacca gccggactac gacatcgtcg
     2761 accaggcgag gggcgtcatc atgtcggtca ccggcgagcc ggatc
//
LOCUS       DATGYW010000255         1727 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_495339, whole genome shotgun sequence.
ACCESSION   DATGYW010000255 DATGYW010000000
VERSION     DATGYW010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_495339"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1727
                     /locus_tag="VK429_03530"
     CDS             <1..>1727
                     /locus_tag="VK429_03530"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020878353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HLN90911.1"
                     /translation="GAACDWERERFTMDEGLSRAVREAFVRLYRKGLVYRGRYIINWC
                     PRCRTALSDLEVSYVEKKGALWYIRYPGMSGEEGVVVATTRPETMLGDTAVAVNPKDD
                     RFAGRIGTTLRLPLMNRPIPMVGDEMVDREFGTGAVKITPAHDVNDFEVARRHGLPSV
                     RVIDESGAMTADAGSFAGMDRFACRDAVVAKLAEEGLLVREEPYLHNVGRCYRCQTVV
                     EPSESMQWFVKTKPLAAPAIRAVREGETRIVPAQWEKTYYEWMENIHDWCISRQIWWG
                     HRIPAFHCRACGKTMVELEPPLLCAACGGTDIRQEEDVLDTWFSSGLWPFSTLGWPER
                     TADLERYYPTSVLVTGFDILFFWVARMMMMGIEFTGKAPFRDVVIHALVRDARGEKMS
                     KTRGNVIDPLDVIDRFGTDAFRFTLVALAAQGRDIRMSDDRVEGYRNFMNKLFQAGRF
                     VRMNVDDATPWEIPDELPVTDRWILSRLQRVIDEVRRGIEEYRFNEAGSAFYQFVWHE
                     FCDWYLEMIKPVLSPEAGEVERQLQRAVLIRVYETILALGHPFIPFITEELWHALPGR
                     RGLLYDRPY"
BASE COUNT          284 a          540 c          613 g          290 t
ORIGIN      
        1 cggcgccgcg tgcgactggg agcgcgagcg gttcacgatg gacgagggac tctcccgggc
       61 ggtccgcgaa gcgttcgtcc ggctttacag gaaagggctc gtataccgcg ggcggtacat
      121 catcaactgg tgtccccgct gccgcacggc gctctccgac ctcgaggtct cctacgtgga
      181 gaagaaggga gcgctctggt acatccgcta cccggggatg tccggggagg agggcgtcgt
      241 cgtcgcgacc acgcgccccg agacgatgct gggcgacacc gccgtcgcgg tcaacccgaa
      301 ggacgaccgg ttcgccgggc ggatcgggac gaccctgcgg ctgccgctga tgaaccgtcc
      361 gattcccatg gtgggcgacg agatggtgga ccgcgagttc ggtaccggcg cggtgaagat
      421 caccccggcg cacgacgtga acgatttcga ggtcgcgagg cggcacggtc tcccctccgt
      481 ccgggtgatc gacgagtccg gggcgatgac ggcggacgcg ggctccttcg cggggatgga
      541 ccggttcgca tgccgggacg cggtcgtggc gaagctcgcg gaagaggggc tgctcgtccg
      601 ggaggagccg tacctccaca acgtcggccg ctgctaccgg tgccagaccg tggtggagcc
      661 gtcggagagc atgcagtggt tcgtgaagac gaagccgctg gccgcccccg ccatccgcgc
      721 agtgcgcgag ggcgagaccc ggatcgtccc ggcgcagtgg gagaagacgt attacgagtg
      781 gatggagaat atccacgact ggtgcatctc ccggcagatc tggtgggggc atcgcatccc
      841 ggcgttccac tgccgcgcgt gcgggaagac gatggtcgag ctcgaaccgc ctttgctgtg
      901 cgcggcgtgt ggagggaccg acatccggca ggaagaggac gttctcgaca cctggttttc
      961 ctccggcctc tggccgttct cgacgctcgg gtggcccgaa aggacggcgg atctcgagcg
     1021 gtactacccc acgtccgtgc tggtgacggg attcgacatc ctctttttct gggttgcgcg
     1081 gatgatgatg atggggatcg agttcacggg gaaagccccc ttccgcgatg tcgtgatcca
     1141 cgccctcgtc cgggacgcca ggggcgagaa gatgagcaag acgaggggaa acgtcatcga
     1201 ccccctcgac gtgatcgacc ggttcggcac cgacgccttc cgcttcaccc tcgtcgcgct
     1261 ggccgcccag gggcgggaca tccggatgtc cgacgaccgg gtcgaggggt accgcaactt
     1321 catgaacaag ctgttccagg cgggccgctt cgtccggatg aacgtcgacg acgctacacc
     1381 gtgggagatt ccggacgaat tgccggtgac ggaccggtgg atcctctcgc ggctccagcg
     1441 cgtgatcgac gaggtccgcc gggggatcga ggagtaccgg ttcaacgagg cgggctccgc
     1501 cttctaccag ttcgtgtggc acgagttctg cgactggtac ctcgaaatga tcaagcccgt
     1561 gctttccccc gaggcgggcg aggtggaacg gcagctgcag cgggccgtcc tgattcgggt
     1621 ctacgaaacg atccttgcgc tcggccatcc gttcatcccc ttcatcaccg aggaattgtg
     1681 gcacgccctc ccggggaggc gggggctcct gtacgatcgg ccatacc
//
LOCUS       DATGYW010000256         2192 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_17197, whole genome shotgun sequence.
ACCESSION   DATGYW010000256 DATGYW010000000
VERSION     DATGYW010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17197"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(181..690)
                     /locus_tag="VK429_03535"
     CDS             complement(181..690)
                     /locus_tag="VK429_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012545184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HLN90912.1"
                     /translation="MKTSTVARNLVLGVLLGLFLTSAADASGTIQADKVVVIKNEKLL
                     LLLRNGKILKSYRVAVGRKSGRRVRQGDNRTPEGRYVIDGRNPSSSYYKALHISYPNA
                     SDVSNARKLGVSPGGEVLIHGLPSGFEDLGDSHADLNWTRGCIAVSNEEMDEIWELVA
                     DGTPVRIVP"
     gene            735..1613
                     /locus_tag="VK429_03540"
     CDS             735..1613
                     /locus_tag="VK429_03540"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HLN90913.1"
                     /translation="MLNRAMFLASLAVLFSCPLPVSSFAAMYEREGTVLGRQATHVVK
                     TDESLPEIGRRYDVGFWAISAANPGVDPFLPDPGRRIVLPTRWILPDAPIYEGIVINI
                     AEMRLFVFSYERARTVTTFPIGIGDQGKETPVGTFSVIEKIRNPAWYVPESIRKEEPD
                     LPAVVPPGPDNPMGSHALRLSNPTLLIHGTNRPWGIGMRSSHGCIRLYQEDISVLFGM
                     VKRGTPVAIVDQPVKAATRGDRVYLQVHDEWDGRDLYGEALKVLEAKNLESLVDLDKT
                     RKATRARTGLLVDVSK"
     gene            complement(1719..>2192)
                     /locus_tag="VK429_03545"
     CDS             complement(1719..>2192)
                     /locus_tag="VK429_03545"
                     /inference="COORDINATES: protein motif:HMM:NF028509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HLN90914.1"
                     /translation="ALVVMAGVVLAASVMAQSAVRDECVALCKAAAKFINEKGLDAGM
                     AEIGNKAGKFVTKNTYVFLMDLDGNRLAHPFPGPTAPQFMKLFDQKDTTGKLYVQEYI
                     KVAKTKGEGWTEYMYPTPEELKKPTLMEDKKSSKKISYVYRVPGKDLMVIAGYFE"
BASE COUNT          452 a          653 c          623 g          464 t
ORIGIN      
        1 gacaaagccg cggccgcggc gaagaatgcc gaggaagcgg caaaaaatgc ggaaaaaacc
       61 gccgctaaga ccgagaaaat gttccacctg caacagaaaa agtagggaca ccgcgcaggt
      121 agaagggggg gccggcgaac ccggcctccc cttcttcacg acatgagacg gaatggggcc
      181 tcaagggacg attctgacag gggtcccatc ggccacaagt tcccatatct cgtccatttc
      241 ctcgttggaa acggcgatgc atcccctcgt ccagttgaga tcggcatgag agtcgccgag
      301 atcttcaaag ccgctcggca acccatgaat caggacttct ccgccgggag atacgcccaa
      361 cttcctcgcg ttgctgacat cggaagcatt ggggtaggag atatggagcg ctttataata
      421 gctgctgctg gggttgcgtc cgtcgatcac atatcttccc tcgggagtcc tgttgtcccc
      481 ctgacggact cttcgtcccg atttcctgcc gacggcaacc cggtagcttt tcaggatctt
      541 cccgttgcgc aacaggagaa ggagtttttc attctttatc accaccacct tgtccgcctg
      601 gatcgttccg gacgcatccg cggcggaggt gaggaagaga cccaacagga cgccgagcac
      661 cagattcctg gcgaccgtgc tcgttttcat gacttggaat gctacgaaag aacgtgcccg
      721 gagtcaaccg gaccgtgctg aatcgtgcaa tgttccttgc atcgctggcg gtcctgttct
      781 cctgtccatt accggtttct tctttcgcgg cgatgtatga acgggaagga acggtcctcg
      841 gcaggcaggc gacccatgtg gtcaagaccg acgaatcgct ccccgagatc ggcagacgat
      901 acgacgtcgg cttctgggcg atcagcgcgg ccaatcccgg cgtcgatcct ttcctccccg
      961 atccgggacg ccggatcgtc ctccccaccc gatggattct tccggacgcg ccgatctatg
     1021 aagggatcgt catcaacatc gcggagatgc gtcttttcgt cttttcgtac gaacgtgcac
     1081 ggaccgtcac gacctttccg atcggaatcg gcgaccaggg gaaggaaacc ccggtcggga
     1141 cgttcagcgt catcgaaaaa atcaggaacc ccgcatggta tgtcccggag tctatccgca
     1201 aggaggagcc cgacctcccg gccgtcgtgc ctcccggccc ggacaacccg atgggaagcc
     1261 acgcgctccg cctgtcgaac ccgacgttgc tgatccatgg aacgaatcgc ccctggggga
     1321 tcgggatgcg cagcagtcac gggtgcatcc ggctgtacca ggaggacatt tccgtgctgt
     1381 ttggaatggt caagcgcggg acgccggtcg ccatcgtcga ccagcccgtg aaggcggcga
     1441 ccagagggga tcgtgtctac ctgcaggttc acgacgagtg ggacgggagg gatctgtacg
     1501 gcgaggcgct gaaggtgctg gaagcgaaaa acctggagag cctggtcgat ctcgataaaa
     1561 cccggaaggc aacccgggcg cgaacgggtc tcctggtgga cgtctcgaaa tagcagtaac
     1621 aggacggaac cggggggctc cgtcctgtta ctatcggcct tacggtttcc tgcaattcag
     1681 ggtgaaatcg acgtacgaat tggcgccggt ccccgcgcct attcgaagta tcccgcgatc
     1741 accatgaggt ccttgccggg gacccggtag acgtagctga tttttttcga ggatttctta
     1801 tcctccatca gtgtgggttt tttcaattcc tcgggcgtcg gatacatata ttctgtccat
     1861 ccttcaccct tggttttcgc caccttgatg tattcctgga catacagctt cccggtcgta
     1921 tctttctgat cgaataattt catgaactgc ggagctgttg gccccggaaa gggatgggca
     1981 agcctgttcc catcgaggtc catgagaaaa acgtatgtgt ttttcgtaac gaacttccct
     2041 gccttgttcc cgatttccgc cattcccgca tcgagtccct tctcgttgat gaatttcgcc
     2101 gcggccttgc acaaggcgac gcattcgtct cttaccgcgc tctgcgccat cacgcttgcg
     2161 gcaaggacaa cacccgccat cacgaccaaa gc
//
LOCUS       DATGYW010000257         4125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_398760, whole genome shotgun sequence.
ACCESSION   DATGYW010000257 DATGYW010000000
VERSION     DATGYW010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4125
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398760"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..261
                     /locus_tag="VK429_03550"
     CDS             <1..261
                     /locus_tag="VK429_03550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90915.1"
                     /translation="RNTSDPVTLHPGSAAVRWSGNGGGGNQSTGSRFTGTLPGGTGRY
                     AGVAGEYEFEWQYVLDAGDGNVQGRITGLRGRFRKDTPPTSP"
     gene            complement(326..778)
                     /locus_tag="VK429_03555"
     CDS             complement(326..778)
                     /locus_tag="VK429_03555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018987708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HLN90916.1"
                     /translation="MGEDRFLDDFHVGEKFVSGGVTITDGEIIHFALQYDPQSFHLDV
                     TAAEKSPYGGLIASGFHTLSLCFRLFMQRGVLAACSIGSPGIDEVRWLAPVRPGDTLR
                     TETEVLEVKPSSSKPDRGILRMKYVGLNQHGAAVISFILNHLLRRRGQ"
     gene            939..1523
                     /locus_tag="VK429_03560"
     CDS             939..1523
                     /locus_tag="VK429_03560"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLN90917.1"
                     /translation="MIKPAELDPSEWVERYGDYLFRYAMLRLRDRSASEDLVQETFLA
                     ALKDRGSFSGGSSEATWLVGILKHKIADHYRHQAREAPLEDGDLREQSDPYPFDGSGH
                     WVSGPADWGGNPADRYREKKFLDQFTKCLSGLSPNHANAFTLREIEGEDTRTICKVLN
                     VSETNLWVILHRARMQLRQCLEAHWFNRNTGKGS"
     gene            1523..1777
                     /locus_tag="VK429_03565"
     CDS             1523..1777
                     /locus_tag="VK429_03565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HLN90918.1"
                     /translation="MLTCKDVTRLISESMDRSLPLRKRIGIRVHLLICKFCARYERQL
                     LQIRDLVRQIVAAEESPGDPYGETLSEEARERIGKSLQQR"
     gene            1883..2059
                     /locus_tag="VK429_03570"
     CDS             1883..2059
                     /locus_tag="VK429_03570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90919.1"
                     /translation="MDRSGFFRKIWAVLGTAMAMRIGAMAAVAENPVGGNGRLPPIDR
                     HIPARIETATFALG"
     gene            2072..2437
                     /locus_tag="VK429_03575"
                     /pseudo
     CDS             2072..2437
                     /locus_tag="VK429_03575"
                     /inference="COORDINATES: protein motif:HMM:TIGR00401.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase"
     gene            2507..2689
                     /locus_tag="VK429_03580"
     CDS             2507..2689
                     /locus_tag="VK429_03580"
                     /inference="COORDINATES: protein motif:HMM:NF045255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90920.1"
                     /translation="MAAARLNGYLGGHGTLKQLKVEIESLGLSPGSSRMLWELVRKRD
                     TTRGNRDTESTDCPVR"
     gene            2936..3367
                     /locus_tag="VK429_03585"
     CDS             2936..3367
                     /locus_tag="VK429_03585"
                     /inference="COORDINATES: protein motif:HMM:NF025698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4395 family protein"
                     /protein_id="HLN90921.1"
                     /translation="MFQPRLVGLFVLLAVILQSPAIFLVLSGILWWNVLIPRLNLFDV
                     VYNLTLANRPGAVRLDPAPPPRRFAQGMAGSFALAIGMLLLRQLGTAALVLQVLLLAA
                     LAALIFGRFCLGSFLYHLLSGRSDFAVGTLPWKRGTFPDPR"
     gene            complement(3452..3820)
                     /locus_tag="VK429_03590"
     CDS             complement(3452..3820)
                     /locus_tag="VK429_03590"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HLN90922.1"
                     /translation="MLDFNSILVFSKDPKKLADFYKQVFQKDPDWSEGGYNGFMVGKG
                     FITFGPHDKVQGRNANPERIMFNFETKDVKGEFERIKKLGAAVVAEPYNPTEDPKGMI
                     ATFADPDNNYFQLVTPWENK"
     gene            complement(3839..>4125)
                     /locus_tag="VK429_03595"
     CDS             complement(3839..>4125)
                     /locus_tag="VK429_03595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013824887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HLN90923.1"
                     /translation="EGQDYWSTGVYREIVPKVKLVYTDNFADAKGNVVPASHYAMQGD
                     WPSELLVTVTFEEDGSRTIMTLRHVGIPPGMLSDCEAGWSGSFDKLAGIL"
BASE COUNT          868 a         1197 c         1207 g          853 t
ORIGIN      
        1 aggaacacct cggatccggt cactcttcac cccgggagcg ctgctgtgcg gtggtccggc
       61 aatggcggcg gaggtaacca aagcaccggg agtcgcttta cggggaccct gccgggtggg
      121 acggggcgat acgcaggcgt ggccggggag tacgagttcg agtggcaata cgtcctcgac
      181 gcaggggacg gaaacgtcca ggggaggatc actgggctac ggggccggtt ccgcaaggac
      241 acgcccccta cctccccata gcggaacggg tctcgggaag aggacagatc gggccatgga
      301 cgccggcaag tggatttcct tggccctatt gtcctcttcg tcggagaagg tggttcagga
      361 taaacgagat aacggcggcg ccgtgctggt tgaggccgac gtatttcatc ctcaggatcc
      421 cccggtccgg cttggacgac gaaggtttca cttcgagaac ctccgtctcg gtcctcagcg
      481 tgtcgccggg ccgcaccggc gccagccacc ggacctcgtc gatcccgggc gaacctatac
      541 tgcacgcggc aaggacccct ctctgcatga acagccggaa gcacaaggac aaggtgtgga
      601 atccgctggc gatgagcccg ccgtacggag acttctccgc ggcggtcacg tccaggtgga
      661 acgattgggg atcgtattgc agggcgaaat ggatgatctc accatccgtg atcgtgacac
      721 cgccggaaac gaatttctcg cccacgtgga aatcgtccag gaaacggtct tcgcccatgc
      781 ttcgcccttt cggattcgtt ctgccccggg aataccgtat agatgacgga acggtgctgt
      841 tcgcttcgtt gtgattcgcc ggtccgactc acgacttcgc ccaggccagg gtcgcagggg
      901 tgattgtctt cacccggaga acatggcata aaaatgtcgt gatcaaaccc gcggaactcg
      961 acccgtcgga gtgggtggaa cggtacgggg actacctgtt ccggtacgcg atgcttcggc
     1021 taagggaccg ctccgcgtcg gaggacctcg tacaggagac gttcctcgcg gcgctcaagg
     1081 atcggggatc gttttccggc ggttcctcgg aagccacctg gcttgtgggg atcctcaagc
     1141 acaaaatcgc ggaccactat cggcatcagg cccgtgaggc gcctttggag gacggcgatc
     1201 tccgggaaca gtccgatccc taccccttcg acgggtcggg acactgggta tccggaccgg
     1261 ccgactgggg cggcaacccg gcggatcgtt accgggaaaa gaaattcctg gaccaattta
     1321 cgaaatgcct ctccgggctt tccccgaacc atgcgaacgc cttcaccctc cgggaaatcg
     1381 agggggagga caccaggacg atctgtaagg ttttgaacgt ttccgagacc aacctatggg
     1441 tgatcctgca ccgggcgcgg atgcagctgc gacaatgcct ggaagcacac tggttcaaca
     1501 ggaatacggg gaagggatct tgatgcttac gtgcaaggac gtgacacgac tgatctctga
     1561 gtccatggac cggtccctgc cgcttcgcaa gcggatcggc attcgggtcc accttctaat
     1621 ctgcaaattc tgtgcaagat acgaacggca gctcctccag atccgcgatc tggtgaggca
     1681 aatcgtggcg gcggaagaaa gcccggggga cccgtacggg gagaccctgt cggaggaggc
     1741 gagagagcgc atcgggaaat ccctgcaaca acgttaaacc cccctccgca attacgccag
     1801 gaattggtaa ggaaacgcgt atatgaaacg tgatgccgtt ccttcggatc aaaaagatgc
     1861 aggtaacttg cggaggagga ccatggatcg ttccggattc ttcaggaaaa tatgggccgt
     1921 cttgggtacg gcgatggcca tgaggatcgg agcgatggcg gcagtcgcgg agaatccggt
     1981 cggtgggaac ggaaggttac cgcccattga cagacacata ccggcgagga tcgaaacagc
     2041 gaccttcgcc ttgggctgat tctggggtcc ggactcccgg ttcgggagtc ttgaaggagt
     2101 cgtcaggacg cgcgtaggct atacaggcgg gtcgacaaat aacccgagct acacctcgtt
     2161 gggtgatcat tcggaagcga tcgagatcga tttcgatccc gcacggatcg ggtacgacag
     2221 gctcctcgaa attttctgga aggcgcatga ccctttttcc aattcttggg cccgccaata
     2281 caaggcggcg atcttctacc acggcgagga gcaacggagg ttggccaaag cgtcgaagaa
     2341 gcatatcgag gagaagaccg gccggcgtat cctgaccgaa atcgtcccgg cctccgcgtt
     2401 ccatctcgcc gagggatacc accagaagta tatgctccag ggaaacccag ggattgcaga
     2461 cgagctacgc gtgtattacc cagacgatac ccggttcacg gcgtcgatgg ccgctgcgcg
     2521 tctcaatggc tacttgggcg gtcacggaac tctaaagcag ctcaaggtcg agatcgaatc
     2581 tctggggcta tcccccggat ccagtcggat gctttgggag cttgtccgta aacgagacac
     2641 cacgcgaggc aaccgggata cggaaagcac agactgtcct gtgagataga tagccaaaaa
     2701 cacatctttc cgccacgtat agattcccgg cgtcatcgaa gaaagcggga tccggcgaat
     2761 cgatgatgtc cctcggatta tcaaatgaca aactagttcg agccggagag ggttggttgt
     2821 aggagagagc atggcaggtg gatcggaaaa tccggattcg aagaggaatt tcatcctcca
     2881 gcaaggactg gatagaccgg cgcaggaaag ttgtcccgtc cggttctccg cgctcatgtt
     2941 tcaaccgcgg ttggtcgggt tgttcgtcct tctggctgtc atcctccagt cgcccgcgat
     3001 ctttctggtc ctgtccggaa tcctttggtg gaacgtgctc attccccgcc taaacctctt
     3061 cgacgtggtc tacaacctga ctctggccaa ccggccgggt gccgtccgcc tggaccctgc
     3121 tccgccccct cgccggttcg cccagggaat ggcaggatcc ttcgccctgg ccattggcat
     3181 gctgcttctt cgccaactgg ggaccgctgc cctcgtcttg caggtcctgc ttcttgcggc
     3241 gcttgccgca ctgattttcg gccggttctg cctgggctcg ttcctgtacc atctccttag
     3301 cggaagatca gatttcgccg taggcacgct tccgtggaaa cggggaacgt ttccagaccc
     3361 ccgctaattc gccggaaata taactgaaaa gggcctccgg atcgctccgg aagcccttct
     3421 gatttcaaca tggtgccgaa ggggggaccg gtcatttatt ctcccagggc gtcacgagct
     3481 ggaaataatt attgtccgga tcggcgaagg tcgcgatcat tcctttcgga tcttccgtcg
     3541 gattgtaagg ctccgcgact actgcggccc cgagcttctt gattctttcg aattctccct
     3601 ttacgtcctt ggtctcgaaa ttgaacatta tcctctcggg gttcgcgttc ctgccctgga
     3661 ctttgtcatg cgggccaaac gtgatgaatc ccttgccgac catgaatccg ttgtaaccgc
     3721 cttccgacca gtcgggatct ttctgaaaaa cctgcttgta aaaatccgcg agtttttttg
     3781 gatccttgga aaaaaccagg attgaattga aatccaacat gatcttcacc tccttacact
     3841 agaggatccc cgccaattta tcgaaggatc cgctccaccc agcttcgcaa tcgctaagca
     3901 tcccgggtgg aatcccaaca tgccgcaggg tcattatcgt cctgctgcca tcttcttcaa
     3961 acgtcacggt caccagaagt tccgacggcc agtccccctg catagcgtag tgcgatgcag
     4021 gaaccacgtt ccccttcgcg tccgcaaaat tatccgtata gacaagcttc acctttggaa
     4081 cgatctcgcg ataaacgccc gtgctccaat agtcctggcc ctccg
//
LOCUS       DATGYW010000258         3086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_292000, whole genome shotgun sequence.
ACCESSION   DATGYW010000258 DATGYW010000000
VERSION     DATGYW010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3086
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292000"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..2850)
                     /locus_tag="VK429_03600"
     CDS             complement(76..2850)
                     /locus_tag="VK429_03600"
                     /inference="COORDINATES: protein motif:HMM:NF015948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF362 domain-containing protein"
                     /protein_id="HLN90924.1"
                     /translation="MTKSDPDSLDGLVLRFRETMGGHVGIDERDPLAGSERGERGNTP
                     LQFDVEIRIEDLGRFLRVADHAAQLSGTVTFEPLGGRLPIRDGVFNLFTVDPRTGIRR
                     MTYAFRFTAADGQPYFLHGHKEIHDDPGALDVVPDMTTLFTTLYRGPDEHAPVYAAGV
                     LTFDLKNTPALVASMKVEGTNSLLRKVAAYTAFTSFAYGALRDEYLHGVRLFYDTRYE
                     NLVLSGRMRRSDGADVPFFLGSGVHDRGFPWGDGELFSDVLLVVGDGKGGFQRFCISD
                     RTLEGLFLDISGGVYRYHGTLLAITDGYSTSFSRMRSGASHLVPFHASIDITFEARSY
                     DGVAVTFPLVPKLLRRLSSTMANELRAHLPGTNPLGVFITPHTVAVRTGSMILGDAGT
                     AVGGPDRNFTILDRRTFGEAERSTFRNVKWPTLLYGYLCAIRPDEQAARVQIHSRTLR
                     DEREHWVRDQLEAFLGTVISRACSCEMRMERDELRVIPLAPAGNRAERIPLLRKLGEP
                     VLEVNNDHFPTAIFQRRIVEVLDPSGQRCLALEDDMSLLRLEPVGTERKATVASIRDP
                     DKFAALNRVLGETGFDQILEAKLTGSGKARQDFSIVIKPNFMFAYDKRDRSTYTDPEL
                     VHHLVKRLRDLGFRNLNVVEAQSTYGEYFDKRSVREMAGYLGYDRKAGYEVVDMTLDA
                     DEERYLGPHLGNHPVSRSWRDADFRISFAKNKTHAYAYYTLTLKNIYGALPLANKFKE
                     YHCGRGIYETTIEYLTAFPVDFGLVDACLSADGPFGIFADPAPNETNTIIGGSDLVAV
                     DWIAASKMGIDPMISPYMKLAVEAFGKPEILFIGDPNPYRPWLNVPVALTLFTNKGVD
                     ANHYFGNLMYSATAQMDETHFRHRNRSLHMRLLRRMTVPLRRAFFLRTGENPSLANRL
                     FSSLFYKMGF"
BASE COUNT          573 a          939 c          983 g          591 t
ORIGIN      
        1 gccatgccgc ctgccccatt tcatgacgtt ccccgcgctc tctccccggc gacggcaggg
       61 gatcgggggt cctcatcaga aacccatctt gtagaacaac gagctgaaca ggcggttcgc
      121 cagggacggg ttttcccccg tacgcaggaa gaaggcgcgg cgcagcggaa cggtcattct
      181 ccgaagcagc cgcatgtgca aagaccggtt cctgtgccgg aagtgcgtct cgtccatctg
      241 cgcggtggcc gagtacatga ggttcccgaa gtagtggttc gcgtcgaccc ctttgttcgt
      301 gaacagggtc agcgcgaccg gcacgttcag ccaggggcga taggggttcg gatccccgat
      361 aaagaggatc tccggctttc cgaacgcctc gaccgcgagc ttcatgtacg ggctgatcat
      421 cgggtcgatg cccatcttgc tcgccgcgat ccagtccacg gccaccaggt cggatccgcc
      481 gatgatggtg ttggtttcgt tcggtgcagg atcggcgaat atcccgaaag gcccgtcagc
      541 gctcagacag gcgtccacca gaccgaaatc cacgggaaac gccgtcaggt attcgatcgt
      601 ggtttcgtag attcccctgc cgcagtggta ttccttgaac ttgttcgcga gtggcagtgc
      661 gccgtaaata ttcttgagtg taagcgtgta gtacgcgtag gcgtgggtct tgttcttggc
      721 gaacgagatc cggaagtctg catcacgcca actgcgcgag acggggtgat tcccgaggtg
      781 cggcccgagg tatcgctcct catcggcgtc caatgtcatg tccacgacct cgtacccggc
      841 tttcctgtcg tagcccagat acccggccat ctcgcggacg ctccgcttgt cgaagtattc
      901 gccgtacgtc gactgcgcct cgacgacgtt caggtttctg aagccgagat cccgcaacct
      961 tttcacgagg tgatggacca gctcggggtc ggtgtaggtc gagcgatccc gtttgtcgta
     1021 ggcgaacatg aagttcggct tgatgacgat ggagaagtcc tgccgggcct ttccggagcc
     1081 cgtcaacttc gcctccagaa tctggtcgaa gcccgtttcc cccaggaccc ggttcaacgc
     1141 ggcgaatttg tccggatccc ggatgctggc gaccgttgcc ttccgctcgg tgcccaccgg
     1201 ttcgaggcgc agcagcgaca tgtcgtcctc gagcgcgagg cagcgttgcc ccgaggggtc
     1261 gaggacctcc acgatccggc gctggaatat cgctgtggga aagtgatcgt tgttcacctc
     1321 gagcaccggt tcgccgagct tccggaggag cggtatccgt tctgccctgt ttccggctgg
     1381 tgcgagcggg atgactcgca gttcatccct ttccatccgc atctcgcagg aacacgcccg
     1441 ggagatgacg gttccaagga aggcctccag ctggtcgcgg acccagtgct cgcgttcatc
     1501 ccgaagtgtc cgtgagtgga tctgcacccg ggcggcctgt tcatccgggc ggatggcgca
     1561 caggtagccg tagagcaagg ttggccactt cacgttccgg aacgtgctgc gctcggcctc
     1621 tccgaaggtg cgtcgatcga ggatcgtgaa gttcctgtcc ggaccgccca ctgcggtacc
     1681 agcatcgcct aatatcatgc tccctgtacg aaccgccacg gtgtgaggcg tgatgaagac
     1741 acccaggggg ttcgttcccg gcagatgcgc gcgaagctcg ttggccatgg tggaggaaag
     1801 ccttcggagg agctttggca ccagagggaa ggtaaccgcc acgccgtcgt aggaccgggc
     1861 ctcgaacgtg atatcgatgc tcgcatggaa tgggacgagg tgcgatgcgc ccgaccgcat
     1921 ccgggagaaa gaggtggaat acccatcggt aatggcgaga agcgtcccat ggtagcggta
     1981 gacgccgccg gagatgtcca gaaagagtcc ttccagcgtt cgatcgctga tgcagaaccg
     2041 ctggaagccc cccttcccgt cgccgacgac cagcaggacg tcggaaaaca gttcgccatc
     2101 cccccaggga aaaccgcgat cgtgaacgcc ggacccgagg aaaaacggca catcggcgcc
     2161 gtcggaacgc cgcatccgac cggacaggac aaggttctcg taccgggtgt cgtagaaaag
     2221 gcgaacaccg tgcaggtact cgtccctgag ggcgccatat gcgaacgagg tgaaggcagt
     2281 gtacgccgcc actttccgca acagggaatt cgtaccttcc accttcattg aagccaccag
     2341 ggcaggtgtg ttcttcaggt cgaacgtgag cacccccgcg gcgtatacgg gggcatgttc
     2401 gtccgggccg cggtagaggg tggtgaagag cgtagtcatg tccggtacga catcgagcgc
     2461 acccggatcg tcgtggatct ccttgtgtcc gtgaaggaag tacggctggc cgtccgccgc
     2521 cgtgaagcgg aacgcgtagg tcatccggcg gattccggtc cgggggtcca ccgtgaagag
     2581 gttgaatacc ccgtcccgga tgggaaggcg gccccccagc ggttcgaacg tcaccgtgcc
     2641 cgacagttgc gccgcatggt cggcgacgcg aaggaagcgc cccaggtctt cgatccggat
     2701 ctcgacatcg aactggaggg gagtgttccc ccgctcccct cgctcggagc cagccaaggg
     2761 gtcgcgttca tcgatcccga catggcctcc catcgtctcc cggaaccgga ggacaagtcc
     2821 gtcaaggctg tcaggatccg attttgtcat cgatgcgact ccatggattt ctcccggcag
     2881 ggagatatgc attttcgcgc tggtattata gtacttggag ggtatggtgc gggatacgaa
     2941 ccggaaagga cttgcttccc tcgcagcggc attcctgctt ctgtgcagcc ctcttcccgc
     3001 cgcaggtggg gggaacgacc ccatcccccc accgggccag gtggcggaga ggacgccggc
     3061 aaacgtaccg gggacggggc gcgtat
//
LOCUS       DATGYW010000259         1706 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_292035, whole genome shotgun sequence.
ACCESSION   DATGYW010000259 DATGYW010000000
VERSION     DATGYW010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292035"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1215
                     /locus_tag="VK429_03605"
     CDS             <1..1215
                     /locus_tag="VK429_03605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020505773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90925.1"
                     /translation="IGLDLAELQMTEEEAGARIAVVDDAFVAHGADPTVYGEDRERID
                     AWLDRVSWVRHKTMKGEWDITLRPARQRHMGTDLAHRVVARMTESIASAGAAFSLNTR
                     VDGISPAPGGLFALRTTKGEVLARYVVAAPGRDGAYWFREAARGLGVTTRYGAIDIGC
                     RVEVASPVYDEITRVLYDPKFLFVTPTHGDRTRTFCTNPGGRVRVESRNGFRLVNGDA
                     LKTRKTANTNFAILNTVSMTEPIQDTTEMGRKVAEFANFWGGGESLVVQRLGDLMQGR
                     RSRGETFHSAALGFDKMTPTLLPGPGVTPGDISFAYPGRIVDNLRETLTLLSRVIPGV
                     AHPSTTIYVPEIKFYDTKYVTDRYLETNVPNLYVAGDGVGKSRGIVGAALNGCLAAEG
                     ILRKEGKARISG"
     gene            complement(1205..>1706)
                     /locus_tag="VK429_03610"
     CDS             complement(1205..>1706)
                     /locus_tag="VK429_03610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011697699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HLN90926.1"
                     /translation="GGTLALYGFGSSAHIVLQLALHRGATAYVCTRGASHRELAKAMG
                     AAWVGEDPAEIPVRTDSAILFAPAGELVPPALRALKRGGTLALAGIHMSDVPGMTYEE
                     CLFYEKNLRSVTANTRADGEGLLREAAEIPLRPKVTLFPLEEANRALQMLKTDRIAGS
                     GVLVIR"
BASE COUNT          287 a          578 c          590 g          251 t
ORIGIN      
        1 atcggcctgg acctcgccga actgcagatg accgaggagg aggcgggtgc gcggatcgcg
       61 gtcgtcgacg atgcattcgt cgcccacggc gccgatccca cggtttacgg cgaggaccgg
      121 gagcggatcg acgcgtggct cgaccgggtc tcctgggttc ggcacaagac tatgaagggg
      181 gagtgggaca tcacccttcg gccggcgcgg caacgccata tgggaacgga tctcgcccac
      241 cgggtggtgg cccggatgac ggaatcgatc gcttcggcag gagccgcgtt ctccctcaat
      301 acgagggtcg acgggatctc cccggcgccc ggcggcctct tcgccttgcg cacgacgaag
      361 ggggaggtgc tcgcgaggta cgtcgtagcc gcgcccgggc gcgacggcgc ctactggttc
      421 cgggaggcgg cccgggggct cggggtcacc acgcgctacg gggccatcga catcggctgc
      481 cgggtggagg tggcgtcccc ggtctacgac gagatcaccc gcgtcctgta cgacccgaag
      541 ttcctcttcg tcactcccac ccacggagac aggacacgga ccttctgcac caacccggga
      601 ggccgggttc gcgtggaatc ccgcaacggg ttccgtctgg tgaacggcga cgccctcaag
      661 acccgcaaga cggcgaacac gaacttcgcg atcctcaaca ccgtgtcgat gacggagccg
      721 atccaggaca cgaccgagat ggggcggaag gtggccgagt tcgccaactt ctggggagga
      781 ggagagagcc tcgtcgtgca gcgcctgggg gatctgatgc aggggcgccg gtcccggggg
      841 gaaacgttcc actccgccgc cctcgggttc gacaagatga cgccgacgct gctccccggc
      901 cccggtgtga ccccggggga catctccttc gcctaccctg gaaggatcgt cgacaacctc
      961 cgggagacac tgacgctcct gtcccgcgtg atcccgggtg tggcgcaccc ttccacgacg
     1021 atctacgtcc cggagatcaa gttctacgac acgaagtacg tcaccgaccg gtatctcgag
     1081 acgaacgtcc cgaacctgta cgtggcgggc gacggggtgg ggaaatcccg cgggatcgtc
     1141 ggggccgccc tgaacggctg cctcgccgcc gaagggatcc ttcgcaaaga ggggaaagcc
     1201 cgcatcagcg gatgacgagt accccggagc cggcgatccg gtcggtcttc agcatctgca
     1261 gcgcccggtt cgcctcctcg agcgggaaga gggtgacctt ggggcgcaga gggatctccg
     1321 ccgcctcgcg cagaagcccc tcgccgtccg cccgggtatt cgccgtcacg ctccgcaggt
     1381 tcttttcgta aaagaggcac tcctcgtacg tcatccccgg cacatcgctc atgtggatac
     1441 ccgccagggc aagggtcccc ccccttttca gcgcacgcag cgccgggggg acgagctccc
     1501 cggccggggc gaagaggatc gcggagtccg tccgcacggg gatctccgcg ggatcttcgc
     1561 cgacccacgc ggcgcccatc gccttcgcca gctcgcggtg ggaggcgccg cgcgtgcaga
     1621 cgtacgccgt cgcaccccgg tgcagcgcaa gttgcaggac gatatgggcg gaggagccga
     1681 agccgtaaag ggccagggtc ccgccg
//
LOCUS       DATGYW010000260         2010 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_453227, whole genome shotgun sequence.
ACCESSION   DATGYW010000260 DATGYW010000000
VERSION     DATGYW010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453227"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..200)
                     /locus_tag="VK429_03615"
     CDS             complement(<1..200)
                     /locus_tag="VK429_03615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S ferredoxin"
                     /protein_id="HLN90927.1"
                     /translation="MKTTRTLRRVSQWSMFLLFVFLFLNTEYKDNDVLPYAVNLFLRL
                     DPLMAGAATLAGRALIGLVWPAL"
     gene            361..1068
                     /locus_tag="VK429_03620"
     CDS             361..1068
                     /locus_tag="VK429_03620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009223670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HLN90928.1"
                     /translation="MEGTPPHILVALPAYQEERSIGGLVRSLRERFPYDVLVVNDGSR
                     DGTSDAAREAGAIVLDLPCNLGIGGAVQTSFLYARDRGYDAVVRIDGDGQHEVEDIPK
                     VLEPLLAGRADAVIGSRFLGETEYRVSIPRIFGIRFFRLLVNLTTGYRVTDPTSGFFA
                     INRSLIEFYSHHYPSDYPEVDAFILMHRLKSRAVEVPVRMYDRAEGKSSITAFRAVYY
                     MVKVTLSYLINRIRRFG"
     gene            1065..1415
                     /locus_tag="VK429_03625"
     CDS             1065..1415
                     /locus_tag="VK429_03625"
                     /inference="COORDINATES: protein motif:HMM:NF021575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2304 domain-containing protein"
                     /protein_id="HLN90929.1"
                     /translation="MSRVTILSIVVSSALLLYILEMVRRRKLREEYSILWLAGSVIIL
                     VLSIKQDWLVGIAHAAGIAYPPSFLFLVGILFILLILIHFSIAISKLHMMNKKMAQEI
                     ALMKEGRTTGNPKD"
     gene            1631..>2010
                     /locus_tag="VK429_03630"
     CDS             1631..>2010
                     /locus_tag="VK429_03630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HLN90930.1"
                     /translation="MIPSRTRVQILVKLFLNPGIRAYLRSLAKEFEVSPNAIRTELNN
                     LSRNKYLVFERDGRNIYYRANISHPLFPELSSMVRKITGVDDLVKSVVDRLGNLEAAY
                     LVGDYARGVDAGIIDVVLGGDIDR"
BASE COUNT          419 a          605 c          560 g          426 t
ORIGIN      
        1 agcgcgggcc agaccaaccc gatgagcgcc cgcccagcaa gggtggcggc accggccatc
       61 agggggtcga gccggaggaa caggttgacc gcgtacggga ggacgtcgtt gtccttgtac
      121 tccgtgttca ggaagaggaa cacgaaaaga aggaacatcg accattgcga cacacgccga
      181 agcgttcgcg tcgtcttcac ccgggaatcc ccggcgtctt cccgttccgg agcgccatgc
      241 tcctattgta ccaacgatgc cgatgcggcg tccgaatcct tcccgccgaa ccggcggagt
      301 gtctccctcg ggtcgacttg caccatgcgg tcctgataaa ttcatggtat gaaatccgga
      361 atggaaggaa ctcccccaca catcctggtc gccctccccg cctaccagga ggagcggtcg
      421 atcgggggac tggtccgttc gctccgggag cgattcccct acgacgtgct cgtcgtgaac
      481 gatgggtcga gggatggaac gtccgacgct gcgagggagg cgggagcgat cgtcctggac
      541 ctgccgtgca atctcgggat cggcggcgcg gtgcagacgt cgttcctgta cgcaagggat
      601 cgcggctacg acgccgtcgt gcggatcgac ggggacgggc agcacgaggt cgaggacatc
      661 cccaaggtgc tggagcccct cctggcggga cgggcggacg cggtcatcgg ttcccgcttc
      721 ctcggggaga cggaatatcg agtgagcatc ccacggatct tcgggatccg gttcttccgc
      781 cttctcgtca acctgaccac agggtaccgc gtgacggacc cgacctcggg cttcttcgcc
      841 atcaaccgat ccctgatcga gttctactcc caccattacc cgtcggatta cccggaggtg
      901 gacgccttca tcctgatgca ccgcctgaaa agcagggccg tcgaggttcc ggtgcgcatg
      961 tacgaccggg ccgagggaaa atcgtcgatc accgccttcc gggcggtgta ttatatggtg
     1021 aaggtgacgc tctcctacct catcaaccgc atccggagat tcgggtgagc cgggtaacca
     1081 tcctttctat cgtcgtctcc tccgcccttc tcctctacat cctggagatg gtgcgccggc
     1141 gcaaactgcg cgaagagtat tccatcctgt ggctggccgg cagcgtgatc atcctcgtcc
     1201 tctcgatcaa gcaggactgg ctcgtcggta tcgcccacgc ggcggggatc gcctacccgc
     1261 cgtcgttcct cttcctggtc ggtatcctct ttatcctgct gatcctcatc catttctcga
     1321 tcgccatctc gaagctgcac atgatgaaca agaagatggc gcaggagatc gcgttgatga
     1381 aagaaggacg gacaaccggt aatcccaagg attaaattcc cgcttgaaaa tccccgctgc
     1441 tggaaagcga tccccgtagt tcgaaacatc gcttacgctt ttctgcaaaa tacattcaat
     1501 tcagaaacca gcagattttc ttttatattt agatagttac aaatattatt gacaaggatt
     1561 cagcctttat tgtacaaaat atttgtacgt taatgtgagg tgatagatgt ctaacaatat
     1621 gttggatggc atgatccctt cccggacccg tgtccagatc cttgtcaaac tgttcctcaa
     1681 tcccggcata cgcgcctacc ttcgcagtct tgccaaggag ttcgaagtct ccccgaatgc
     1741 gatccggacg gaactcaaca acctgagccg taacaaatac ctggttttcg agagggacgg
     1801 cagaaacatc tactaccggg ccaacatcag ccaccccctg ttccccgaac tctcctctat
     1861 ggtgagaaaa atcaccggag tcgacgatct cgtgaaatct gttgtcgacc gcctcggaaa
     1921 cctcgaagcg gcataccttg tcggtgatta cgcccgcggc gtcgacgcag ggataatcga
     1981 cgttgtgctt ggtggggata tcgaccggat
//
LOCUS       DATGYW010000261         1849 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_453440, whole genome shotgun sequence.
ACCESSION   DATGYW010000261 DATGYW010000000
VERSION     DATGYW010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453440"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..831
                     /locus_tag="VK429_03635"
     CDS             <1..831
                     /locus_tag="VK429_03635"
                     /inference="COORDINATES: protein motif:HMM:NF017847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF933 domain-containing protein"
                     /protein_id="HLN90931.1"
                     /translation="ETDPLSPQALTELRSVEVLALVVRAFADDYHPAPPGGLDPAAEF
                     RELSSAIVLSDYLVAQKRIERMTKEAKRDAEWTALHKAIAAFERDVPLRSVDLSVEEE
                     RVLSGFRFVSRLPTLLILNVGEGEATAKTYPDVTKEAEKANVPLVRLCAKVEEEIAQL
                     SPAEQADFLKEMGIARSARDQLVRGAFEATRYISFLTVGEDEVRAWNVREGSTAPTAA
                     GKIHSDLEKGFIRAEVISSDDFLRCGSMAKAKTEGKLRLEGKEYVVRDGDIVHVRFNV
                     "
     gene            912..>1849
                     /locus_tag="VK429_03640"
     CDS             912..>1849
                     /locus_tag="VK429_03640"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HLN90932.1"
                     /translation="MGSAIDIPEVRKGASKVRVLVVDDEEFLRSIVRERLEIAGYIVE
                     EASNGKEALAMASNGHGPYDVLLTDVRMPVMDGITLLSEVAKRCPGTAGIVMSANTEL
                     DTAVQAMKKGACDYITKPFNFDVLLITIENALRKKDLERQVEDYRANLEKKVKEQTDE
                     LNLIYVGAFDMAITSLEARDPYTRGHSRRVTHYSLKIAEELGVTGQELEDLRRAAVFH
                     DLGKIGVRDAVLNKPGKLTDEEYGEIALHPEKAVRILELIPPFIPLLPAILHHHERFD
                     GRGYPARLSGDKIPFASRIMAIADTFDAMTSTRAYR"
BASE COUNT          365 a          574 c          607 g          303 t
ORIGIN      
        1 gagacggatc ccctctcccc gcaggcattg accgagcttc gaagcgtcga ggtcctcgcg
       61 ctcgtcgtcc gggccttcgc cgacgactac caccctgcgc ctcccggcgg cctcgacccg
      121 gcggccgaat tccgcgaact ctcctccgcc atcgtcctct ccgattacct cgtcgcgcag
      181 aagaggatcg agcggatgac gaaggaggcg aagcgggacg cagagtggac cgccctgcac
      241 aaggcgatcg cggcgttcga gcgggatgta ccccttcgga gcgtcgacct gtcggtcgag
      301 gaggaacggg tcctctcggg gttccggttc gtgagccgcc tgccgacgct tctgatcctg
      361 aacgtcggcg aaggagaagc gacggcgaag acgtaccccg acgtgacgaa agaggcggag
      421 aaagcgaatg tccccctggt gcgcctgtgc gcgaaggtcg aggaggagat cgcccagctg
      481 tcgccggccg agcaggccga cttcctgaag gagatgggga tcgcgcggtc cgcccgtgac
      541 cagctcgttc gcggcgcctt cgaggcgacg cgctatatct ccttcctgac ggtgggggag
      601 gacgaggtgc gcgcctggaa cgtgcgggag gggagcaccg ccccgacggc ggcggggaag
      661 atccactccg acctggaaaa ggggttcatc cgggccgagg tgatctcctc cgacgatttc
      721 ctccggtgcg ggtcgatggc gaaggcgaag acggaaggga agctgcggct cgagggaaag
      781 gagtacgtcg tcagggacgg ggacatcgtt catgtccggt tcaacgtgtg aatccgccag
      841 cggagcattt ttcgatttcc gaggcgattt tatcgtaaag ttttcgtatt tcggcggcga
      901 taagggggtt catgggctcc gcaatcgaca tcccggaagt caggaaaggc gcctcaaagg
      961 tccgcgtcct cgtggtcgat gacgaggaat tcctccgttc gattgtcagg gaacgcctcg
     1021 aaatcgctgg gtatatcgtt gaagaggcgt ccaacgggaa ggaggcgctc gccatggcgt
     1081 cgaacggcca cggcccgtac gacgtccttc tcaccgacgt ccggatgccc gttatggacg
     1141 ggatcaccct cctctccgag gtggcgaaga gatgccccgg gaccgccggc atcgtgatgt
     1201 ccgcgaacac cgaactcgat accgccgtgc aggccatgaa gaagggagcg tgcgactaca
     1261 tcacgaagcc cttcaacttc gacgtcctgc tgatcaccat cgagaacgca ctgcgcaaga
     1321 aggatctcga gcggcaggtc gaggattacc gggcgaacct cgaaaaaaag gtgaaggagc
     1381 agaccgacga actcaacttg atatatgtcg gcgccttcga catggcgatc acatcgctcg
     1441 aggcgaggga tccctacacc cgcggccatt cccgtcgggt gacgcactac tccctgaaaa
     1501 tcgcggagga actgggggtg acggggcagg agctcgagga ccttcgccgc gcggccgtgt
     1561 tccacgacct cgggaagatc ggcgtcaggg acgcggtgct gaacaagccg ggaaagctca
     1621 cggacgagga gtacggggag atcgcccttc accccgagaa agcggtccgg atcctcgaac
     1681 tgatcccccc cttcataccg cttctccccg ccatcctgca ccaccacgag cggttcgacg
     1741 gaagggggta ccccgcgcgg ctgtccgggg acaagatccc gttcgcctcg cgcatcatgg
     1801 cgatcgctga cacctttgac gcgatgacct ccacccgcgc ctaccggaa
//
LOCUS       DATGYW010000262         2166 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_238708, whole genome shotgun sequence.
ACCESSION   DATGYW010000262 DATGYW010000000
VERSION     DATGYW010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238708"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1040
                     /gene="bamD"
                     /locus_tag="VK429_03645"
     CDS             <1..1040
                     /gene="bamD"
                     /locus_tag="VK429_03645"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HLN90933.1"
                     /translation="LKGDLLSRQVLSPERDQGKTREAIKAYTLFLEKEQGTPRAREAS
                     GKILELRNRLAVHEAAVVEHYLTRKKYESAEARARWAVATYPDVPAATTLLAQLVRSL
                     EKQGKKDEAEISRKMLAEKSPDAVGKKPAAVSSLAGAYQMKQSYQGRRGRYEIILQPR
                     YVASKEIDVDGGSKLELDPALGFGVGFGYNFTNKLALHLDGSWTRSDYNAKIATTDSG
                     GISTGTTTASGVLDTATVALNLSYYFLDGPLTPFLTGGIGWTFVDSNIPSGPPEGVCW
                     EDPWYGYVCPSYQNTYTKNYFSYNLGIGARWDVIPGFFLRGSIGWQWVDLGKAGTTDF
                     MGGRMDLGYMF"
     gene            1123..1839
                     /locus_tag="VK429_03650"
     CDS             1123..1839
                     /locus_tag="VK429_03650"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLN90934.1"
                     /translation="MSRELAGLIRMGKNAFSEADCQRAERHLLEALDGGVKYPDIHYT
                     LGLIDHRRGNYRRAVERFGQAVSLNPDYTEALLSLSITLNDMGRYEEARDAYERAAEI
                     LSRSGGSPGENLFRGRIANLHKELGELYLALDQHDDAIREFRHALSIAPRYPDLRVRL
                     VTALREAGRTGEARNEVDAFLAENPENAAALIQKGILHYLAGEKAQARRVWEEAHYKA
                     PLNKIVQVYLNTIDRENPPD"
     gene            complement(1886..>2166)
                     /locus_tag="VK429_03655"
     CDS             complement(1886..>2166)
                     /locus_tag="VK429_03655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019017081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HLN90935.1"
                     /translation="SMDAAALRDLADAVKGKLSSGILLLGAREGERCHLVAGVTSDLT
                     ARFSASDIVRKAAALVGGGGGGRKDMAQAGGSRVGNLPEALASISAWE"
BASE COUNT          409 a          710 c          719 g          328 t
ORIGIN      
        1 tcctgaaggg tgacctgctc tcccggcaag tcctgtcgcc cgaaagggac caggggaaga
       61 cgcgggaggc gatcaaggcg tacacgttgt tcctcgagaa ggagcagggc accccccgcg
      121 cgcgggaggc ttccgggaag atcctcgagc tgcggaaccg gctggccgtg cacgaggcgg
      181 ccgtggtgga acactacctc accaggaaaa agtacgaaag cgccgaggcg cgggcccgtt
      241 gggcggtcgc gacgtacccc gacgtgccgg ccgccacgac gctcctcgcc cagctcgtac
      301 ggtcgctcga aaaacagggg aagaaagacg aggcggagat ctcccggaag atgctggcgg
      361 agaaatctcc cgatgcggtg ggcaagaagc cggctgccgt atcgagcctc gccggggcat
      421 atcaaatgaa gcagtcgtac cagggccgcc ggggccggta cgagatcatc ctccagccgc
      481 gctacgtcgc ttccaaggag atcgatgttg atggcgggtc gaagctcgag ctcgacccgg
      541 cactcggctt cggagtggga ttcggctaca acttcaccaa caagctcgcc ctgcacctcg
      601 acgggtcgtg gacccgctcg gactacaatg ccaagatcgc cacgaccgac agcggcggga
      661 tttccaccgg cacgacgacg gccagcgggg tcctcgacac cgccacggtc gccctcaacc
      721 tgagctacta cttcctggac ggtccgttga cacccttcct tacggggggg atcggctgga
      781 cgttcgtgga ctcgaacatc ccttcagggc cccctgaagg ggtttgctgg gaggacccct
      841 ggtacggcta cgtctgcccc tcctaccaga acacctacac caagaactat ttctcgtaca
      901 atctggggat cggtgcgcga tgggacgtta tccccggctt cttcctgcgc ggcagcatcg
      961 gttggcagtg ggtcgatctc ggcaaggcgg gaaccacgga cttcatgggt gggcggatgg
     1021 acctcggcta catgttctga gcaggccgga ggacggcgat ggagtggggg acaccatgtt
     1081 tcatacgagg aatgtcaccg tagttgtcgg tgatattgtg cgatgagccg ggagttggcc
     1141 gggctgatcc ggatgggaaa gaacgccttc agcgaggcgg actgccagag ggccgagcgg
     1201 cacctgctcg aggccctcga cggcggcgtg aaataccccg acatccacta cactctgggc
     1261 ctgatcgacc accggcgggg gaattaccgg cgggcggtcg agcggttcgg gcaggcggtc
     1321 tccctcaacc ccgactacac cgaagcgctc ctttccctct cgatcacact gaacgacatg
     1381 ggccggtacg aagaggcgcg ggacgcctat gaacgcgccg cggagatcct ctcccggagt
     1441 gggggatccc ccggggagaa cctgttccgc gggcggatcg cgaacctgca caaggagctc
     1501 ggggaacttt acctggcgct ggaccagcac gacgacgcga tccgggaatt ccggcacgcc
     1561 ctctccatcg caccgcgata tcccgatctc cgggtgcggc tggtgacagc gctccgtgaa
     1621 gcggggcgga cgggcgaggc gcgcaacgag gtggatgcgt ttctggcgga gaaccccgaa
     1681 aacgcggcgg ccctcatcca gaaggggata ctgcattacc tcgccgggga gaaggcgcag
     1741 gcgcgccggg tgtgggaaga ggcgcattac aaggcgccgc tcaacaagat cgtccaggtg
     1801 tacctgaata ccattgaccg ggaaaacccg cccgattaga atccgcgaac ccgcgcccgc
     1861 gacccgcccc tgggccgcgg cccgctcatt cccaggccga gatcgaagcg agcgcttccg
     1921 ggagattccc gacgcgggaa ccgccggcct gtgccatgtc cttccggccg ccgccgccgc
     1981 cgcccaccag cgccgccgcc ttccgtacga tgtcggacgc agagaacctc gcggtgaggt
     2041 cggaggtgac cccggccacc aggtggcacc gttccccctc ccgggctccc aggagaagga
     2101 tcccgctcga gagcttcccc ttcaccgcgt cggccagatc ccgcagcgcg gcggcgtcca
     2161 tcgact
//
LOCUS       DATGYW010000263         1528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_292357, whole genome shotgun sequence.
ACCESSION   DATGYW010000263 DATGYW010000000
VERSION     DATGYW010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292357"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1171)
                     /gene="proS"
                     /locus_tag="VK429_03660"
     CDS             complement(<1..1171)
                     /gene="proS"
                     /locus_tag="VK429_03660"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HLN90936.1"
                     /translation="MRYSRYLMPTTKETPSDAEVVSHRLMLRAGLLRKVASGIYNYMP
                     AGLRVLRKVEKILREEMDGAGALEVLMPSVVPSELWKESGRWDAYGKELLRFKDRADR
                     EFCLGPTHEEVVTDLVRREVRSYRQLPLTLYQIQDKFRDEIRPRFGLMRGREFFMKDA
                     YSFDADEEGASASYKKMYDAYCRIFRRMGLDYRAVEADTGSIGGSSSHEFMVIADSGE
                     DAIVSCASCSYGANVEKAECDLSETPPMPMEPGAVTGGNPRKVATPGKRTIEEVSDFL
                     AIDPATLIKTLLFETSVGDVAVLVSGAHEVNEIKVKNHLGAEYVRLAGEERVRQVTGA
                     PSGFAGPVGLTVRTIADYSVRTIASGATGANEKDVHLVDVVPGRDFIPERYADLRV"
     gene            complement(1171..>1528)
                     /locus_tag="VK429_03665"
     CDS             complement(1171..>1528)
                     /locus_tag="VK429_03665"
                     /EC_number="1.17.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020676917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HLN90937.1"
                     /translation="EEVRVGWEILKSLGLRHRGPEFISCPTCGRVSIDIVKIATEVER
                     RLSHLPVPLKIAVMGCAVNGPGEAREADVGVAGGKGEGLLFVKGKIVKKVKERDIAVE
                     VVRIAETMAAGKRRGE"
BASE COUNT          249 a          563 c          440 g          276 t
ORIGIN      
        1 ccactcgcag gtccgcgtac ctttcaggaa tgaaatccct cccgggaacg acatcgacga
       61 ggtggacgtc cttttcgttc gcgccggtgg cccccgacgc gatcgtccgc accgaatagt
      121 ccgcgatcgt ccgcaccgtg aggccgacgg gccccgcgaa ccccgacggg gctcccgtta
      181 cctgccgaac gcgctcctcc ccggccaggc ggacatattc tgcgccaagg tggttcttca
      241 ccttgatctc gttcacctcg tgggccccgg agacgaggac ggccacgtcc ccgacggacg
      301 tttcgaacag gagcgtcttg atcagcgtcg cgggatcgat cgcgaggaag tccgacacct
      361 cctcgatcgt ccgcttgccg ggggttgcca ccttgcgtgg gttgccccct gtcaccgctc
      421 ctggttccat cggcatggga ggagtttcgg aaagatcaca ctccgccttc tcgacgttcg
      481 cgccatagga gcaggaggcg caggagacga tcgcgtcctc gccggaatcg gcgatcacca
      541 tgaactcgtg cgagctcgaa ccgccgatgc tccccgtgtc cgcctcgacc gcgcggtaat
      601 cgagccccat ccggcggaaa atccggcagt acgcgtcgta catcttcttg tacgacgcgg
      661 acgccccctc ctcgtccgcg tcgaacgaat aggcgtcctt catgaagaat tcccggcccc
      721 gcatcagccc gaaccggggg cggatctcat cgcggaactt gtcctggatc tggtagagag
      781 ttagcggcaa ctgcctgtac gaccggactt cccgccgcac gaggtcggtg accacctctt
      841 cgtgcgtggg accgaggcag aactcgcggt ccgcccggtc cttgaagcga agcagctcct
      901 tcccgtaggc gtcccaccgg ccgctctcct tccagagctc ggaaggcaca accgagggca
      961 tcagcacctc cagcgccccc gccccgtcca tctcctcgcg caggatcttc tcgaccttgc
     1021 gcaggacccg cagccctgcg ggcatgtagt tgtagatccc cgaagccact ttccggagga
     1081 gccccgcgcg cagcatcagg cggtggctga cgacctccgc gtcggacggc gtctccttgg
     1141 tggtcggcat cagatatcgg gaataccgga tcactcgcct ctcctttttc cggcggccat
     1201 cgtttccgcg atgcggacga cctcgacagc gatgtccctc tccttcacct tcttcacgat
     1261 cttccccttc acgaagagga gcccttcccc cttcccgccc gccaccccca cgtcggcctc
     1321 gcgcgcctcg ccgggaccgt tgacggcgca ccccatcacc gcgatcttca ggggaacggg
     1381 caggtgcgac aagcgtcgct ccacctcggt cgcgatcttg acgatgtcga tcgacacccg
     1441 gccgcaggtg gggcacgaga tgaactccgg cccccgatgt cgcaggccga ggcttttcag
     1501 gatctcccag ccgacgcgga cctcctct
//
LOCUS       DATGYW010000264         2075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_292649, whole genome shotgun sequence.
ACCESSION   DATGYW010000264 DATGYW010000000
VERSION     DATGYW010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292649"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..314
                     /locus_tag="VK429_03670"
     CDS             <1..314
                     /locus_tag="VK429_03670"
                     /inference="COORDINATES: protein motif:HMM:NF016354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF512 domain-containing protein"
                     /protein_id="HLN90938.1"
                     /translation="LEEFSFRAGARFVALPVVNRLMGGSVTVTGLLGGNDIAEAVRGK
                     ACGTLFIPSVTLRDARDLFLDGLSPEELSRRTGSRVALFDPTPRGFLDAVYPRNRPEY
                     H"
     gene            362..438
                     /locus_tag="VK429_03675"
     tRNA            362..438
                     /locus_tag="VK429_03675"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:396..398,aa:Val,seq:gac)
     gene            493..>2075
                     /gene="thrS"
                     /locus_tag="VK429_03680"
     CDS             493..>2075
                     /gene="thrS"
                     /locus_tag="VK429_03680"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019642483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HLN90939.1"
                     /translation="MTLLELARQEGKAKVAIAARVNGVVTDLARPLPDGAQVEWVLPS
                     DPDGVEILRHSTAHVLAAAVKDLFPGALITIGPAIENGFYYDFDVDTPFTPEDLVRIE
                     ERMREIVKADHPFVREEATKERARALFPGEPYKEELLADIPDETVSLYRMGDFLDLCR
                     GPHVPGTGRVGAFHLMNTAGAYWRGDSKNKMLTRIYGIAFASKKELDEHLRILEEIKK
                     RDHRKLGRELDLFSVTDEVGPGLILWHPKGSVVRRVMEDFWRDEHAKAGYDLVFSPHI
                     ARLDLWRISGHTDFYRQAMFSPIDIEGQEYQLKPMNCPFHIQIYKSRMRSYRDLPIRY
                     AELGTVYRYEPSGTLHGLLRVRGFTQDDAHLFLRPDQLDEEIFTLLDFTLFVLRAFGF
                     ERYDVYLSTRPEKYAGSVEHWALAESALRKALERKELPFEVDPGEGVFYGPKIDIKIK
                     DMLGRSWQCSTIQVDFNNPERFDATYIADDGTPRRAIMIHRALMGSLERFFGVLVEHY
                     AGAFPVWLAPVQADVVPVT"
BASE COUNT          363 a          669 c          673 g          370 t
ORIGIN      
        1 ttcttgaaga attctccttc agggcggggg ctcggttcgt cgcgctcccg gtcgtaaacc
       61 gcctgatggg gggtagcgtc accgtcacgg ggctgctcgg gggaaacgac atcgccgagg
      121 cggtccgggg caaggcctgc gggacgttgt tcatcccctc ggtcaccctt cgggacgcgc
      181 gcgacctgtt tctcgacggg ctctccccgg aggagctctc gcgtcggacc ggttcgcgtg
      241 tcgccctctt cgacccgacg cccagggggt tcctcgacgc cgtctatcca cggaaccgtc
      301 cggaatatca ttgacatttc cttcggcagc cggtagattt attgatcctg atcggaggga
      361 tgggcgatta gctcagatgg ttagagtacc tgcttgacat gcagggggtc actggttcaa
      421 gtccagtatc gcccaccatt tctctccccc gaacggcgcg catcgaaaaa tccgcaagga
      481 gtccgcgcag ggatgacgct cctcgagctg gccagacagg aagggaaggc gaaggtcgcc
      541 atcgccgcca gggtgaacgg cgtggtgacg gacctcgcgc gcccgcttcc cgacggcgcg
      601 caggtcgaat gggtccttcc atccgacccg gatggcgtgg agatcctccg ccacagcacg
      661 gcgcacgtcc tggccgccgc cgtcaaggat ctcttcccgg gggcgttgat cacgatcggc
      721 cctgccatcg agaacgggtt ctattacgac ttcgacgtcg atacgccgtt caccccggag
      781 gacctcgtcc ggatcgagga gcggatgcgg gagatcgtga aagccgatca cccgttcgtc
      841 cgcgaagagg cgacgaagga gcgggcgcgg gccctcttcc cgggagagcc gtacaaggag
      901 gagctgctcg ccgacatccc cgacgagacc gtttccctct accggatggg ggacttcctc
      961 gacctgtgcc gggggccgca cgtgccgggg acgggccgtg tgggcgcgtt ccacctgatg
     1021 aacacggccg gagcctactg gcgcggcgat tcgaagaaca agatgctcac gcggatctac
     1081 gggatcgcct tcgcgtcgaa gaaggagctc gacgagcacc tgcggatcct cgaggagatc
     1141 aagaaacggg accaccgcaa gctgggccgg gagctcgacc tcttcagcgt gaccgacgag
     1201 gtcggcccgg ggctcatcct ctggcacccg aagggatcgg tcgtccgcag ggtcatggag
     1261 gatttctggc gggacgagca tgcgaaggcg ggatacgacc tggtcttctc cccgcacatc
     1321 gcgcgactcg acctgtggcg gatcagcggg cacacggatt tctaccgcca ggcgatgttc
     1381 tcaccgatcg acatcgaggg gcaggagtac cagctgaagc cgatgaactg cccgttccac
     1441 atccagatct acaagtcccg catgcgatcg taccgcgacc tgccgatccg gtacgcggaa
     1501 ctgggcacgg tgtatcgcta cgagccgtcc gggacgcttc acggcctgct tcgcgtgcgc
     1561 ggcttcacgc aggacgacgc gcacctcttc cttcgccccg accagctcga cgaggagatc
     1621 ttcacccttc tcgatttcac gctcttcgtg ctgcgggcgt tcgggttcga gcggtacgac
     1681 gtctaccttt ccacccggcc ggagaaatac gcgggctcgg tcgaacactg ggccctcgcc
     1741 gagagcgccc tccggaaggc cctcgagcgg aaggagcttc ccttcgaggt cgatcccggg
     1801 gaaggggtct tctacggacc gaagatcgac atcaagatca aggatatgct ggggcgctcc
     1861 tggcaatgct ccacgatcca ggtcgacttc aacaatcccg agcggttcga cgcgacctat
     1921 atcgcggacg acggcacgcc gcgacgcgcc atcatgatcc accgcgccct gatgggttcg
     1981 ctggagaggt tcttcggcgt cctggtggag cattacgcgg gggccttccc ggtttggctc
     2041 gccccggtgc aggccgatgt cgtaccggtt acgga
//
LOCUS       DATGYW010000265         2112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_17800, whole genome shotgun sequence.
ACCESSION   DATGYW010000265 DATGYW010000000
VERSION     DATGYW010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17800"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..409
                     /locus_tag="VK429_03685"
     CDS             <1..409
                     /locus_tag="VK429_03685"
                     /inference="COORDINATES: protein motif:HMM:NF018652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90940.1"
                     /translation="RHNRKYWRRDGYLGLGPSAHGLLFPGESAPFGLRTANPPSLPDY
                     VRAIGEARLPWGPVHTCGREDTWKESLIFGLRMSEGVSPVSIEERNGPPPDKVREAVE
                     KLIGSGLLLREGDRLLLPERYWFVSNEVLQRLA"
     gene            complement(414..965)
                     /locus_tag="VK429_03690"
     CDS             complement(414..965)
                     /locus_tag="VK429_03690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015403263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90941.1"
                     /translation="MKNPGSIFRCLLAGAAFAAAMGFSEPARAEVSVNINLGPPPIVV
                     SAPPAVVMIPQSQVYFVPDPQIDVFFYAGYWWSPRGQQWYRAKAYNGPWGMIEQRRVP
                     PAVIYVPRDYRERYERERHVPYGQWKKEHSSWDRQNRKSHKQWEKEREKEWKESQKGH
                     GKKDDKHGDQGGDHGGGQGKHGR"
     gene            1080..>2112
                     /locus_tag="VK429_03695"
     CDS             1080..>2112
                     /locus_tag="VK429_03695"
                     /inference="COORDINATES: protein motif:HMM:NF028512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HLN90942.1"
                     /translation="MNTEKKETGPEGIERRVGPGIRLKLFGFLLPLAFLLIASVTWVV
                     TEVTQSTLRRDLLQRGAAVSRVVALSAGHFLLLKDPLGLDRLVSETRASDPDIAFVAI
                     RDASDIVAAHDRVTERGKPYRPVPPLLPVGTFGDTRAEEVVRDGRRLIEYSTPISFAG
                     RHLGIASLGLSMEGLAKAQRSIRRIIFAAAAAILVLTFFGTMLLSSLITTPVKRLHQG
                     VLALASSETYQPVPARSSDELGALTRNFNRMAETILSQKTALQNQKTSLEKKKLQLEE
                     AYVSVVHVIAASLDARDPYTIRHSDRVAQLSCALGRRLGMDEEELANLERAAIFHDLG
                     KIKTPDNLLH"
BASE COUNT          354 a          739 c          638 g          381 t
ORIGIN      
        1 ccgccacaac aggaaatatt ggcgccggga cgggtacctc gggctcggtc cctcggccca
       61 cgggctgctc ttccccgggg aatccgcccc gttcggcctg cggaccgcga atccgccgtc
      121 gctccccgac tacgtccggg cgatcggcga agcccgtctt ccctggggac cggtccacac
      181 ctgcggccgg gaggacacct ggaaggagtc gctcatcttc gggttgcgga tgtcggaggg
      241 ggtgtccccg gtctccatcg aggaaaggaa cggccccccg cccgacaagg tgcgggaggc
      301 cgtggaaaag ctgatcggat ccgggttact gctacgggag ggggatcggc tactgctccc
      361 ggaacggtac tggttcgtat cgaacgaggt gcttcagcga cttgcctgaa ggatcaacgg
      421 ccgtgcttac cttgaccccc gccgtggtca cccccctggt caccgtgctt gtcatccttc
      481 ttcccgtggc ccttttggct ctccttccac tccttctcgc gctccttctc ccattgcttg
      541 tgcgacttcc ggttctgccg gtcccaactg gaatgttcct tcttccattg gccgtacggg
      601 acgtgccgct cccgctcgta cctttccctg tagtcccgcg gcacgtagat caccgccggg
      661 ggcacccgtc gctgctcgat catcccccac ggcccgttat acgccttcgc acggtaccac
      721 tgctgcccgc gcggcgacca ccagtacccc gcgtagaaga aaacgtcgat ttgggggtcc
      781 gggacgaagt agacctggga ctgcggaatc atcacgacgg ccggcggcgc ggacaccacg
      841 atcggcggcg gcccgaggtt gatgttgacg ctcacttccg cccgcgcggg ctccgaaaat
      901 cccatcgcgg cggcaaacgc cgcccccgcc agcaggcaac ggaaaatcga tcccggattc
      961 ttcatgtccc gcctcccttc ctttcgtcgc aggtaagacc gccccgcgac cctttttatt
     1021 caatcacgcc attatggagc ccacgaatcg attcgcatct tctataatac atggctgcta
     1081 tgaataccga gaagaaagag accgggccag aggggatcga gcggcgggtc gggccaggga
     1141 tccgcctgaa actgttcggg ttcctgcttc ccctcgcctt cctcctgatc gcctccgtga
     1201 cctgggtggt cacggaggtg acccagtcca ccttgcgccg cgacctgctc cagcgaggcg
     1261 ccgcggtctc ccgcgtcgtg gccctctccg cgggacattt cctccttctg aaggatccgc
     1321 tggggctgga ccggctggtc tcggaaacca gggcgagcga tcccgacatc gccttcgtcg
     1381 ccatccggga cgcgtccgac atcgtggcgg cccacgaccg ggtgacagag aggggaaaac
     1441 cgtatcgtcc cgttccgccc ctgcttccag tggggacgtt cggcgacacg cgggcggagg
     1501 aggtggtgcg cgatggacga cggctcatcg aatactccac cccgatctcc ttcgcagggc
     1561 ggcacctggg gatcgcctcc ctcgggctct ccatggaagg tctggcgaag gcgcagcgat
     1621 cgatccggcg gatcatcttc gcggcggcgg cggccatcct ggtgcttacc ttcttcggta
     1681 cgatgctgct ctcgtcgctc atcaccaccc cggtaaagcg tctccaccag ggagttctcg
     1741 ccctcgcgag cagcgagacg taccagcccg tcccggcgcg ctcctccgac gaactgggcg
     1801 ccctcacacg gaacttcaac cggatggcgg agacgatcct ctcccagaag accgccctgc
     1861 agaaccagaa gaccagcctg gagaagaaga agcttcaact ggaggaagcc tacgtcagcg
     1921 tggtccacgt catcgccgcg tcgctggacg cgagggaccc gtacacgata agacactccg
     1981 accgcgtggc gcagctgtcg tgcgcgctgg ggcggcgcct cgggatggac gaggaggagc
     2041 tcgccaacct cgaacgggcg gcgatcttcc atgacctcgg gaagatcaag acccctgaca
     2101 acctcctcca ca
//
LOCUS       DATGYW010000266         2519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_453835, whole genome shotgun sequence.
ACCESSION   DATGYW010000266 DATGYW010000000
VERSION     DATGYW010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453835"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(420..1235)
                     /locus_tag="VK429_03700"
     CDS             complement(420..1235)
                     /locus_tag="VK429_03700"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLN90943.1"
                     /translation="MPSTGQEGHWDKTYAENPAFFGDGESEFAHTALNLFKGASVRSI
                     LELGCGQGRDTLLFAKEGFHVTALDYSETGLLNLQGSAREIGVSDRISTQVFDVRKAL
                     PFPDGSFDACYSHMLLCMELSTSELMFLLGEVRRVLKTGGHALYSVRNTFDKHHGAGT
                     HKAEEMYDIGGFVVHFFSEEKIRSLATGYELLDLRRMQEGSLPRELFGVVLRKREEAA
                     DASHIQEEEEGDVADHMGKFQDFFHSVFNTGVLDRKTKHLVALGASLAAACDS"
     gene            complement(1250..1636)
                     /locus_tag="VK429_03705"
     CDS             complement(1250..1636)
                     /locus_tag="VK429_03705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006964604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SHOCT domain-containing protein"
                     /protein_id="HLN90944.1"
                     /translation="MKGFRTGFAVLVVALILLVFLGIASEVFYGRHYARSIAPTWGGM
                     PMGPWMFWGGGMWIFPLIGLVVFLFIIYFVFTRGFGGSGPFCGWGGQGGGSTGSQSPM
                     DVLKMRYAKGEISREEFERMKKDISE"
     gene            complement(1633..1947)
                     /locus_tag="VK429_03710"
     CDS             complement(1633..1947)
                     /locus_tag="VK429_03710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90945.1"
                     /translation="MDPREMMKGMMGEGFNPMEMCKGMIGSITKSAEMATYATPELRS
                     LFEEWLGQIEMEILEFLKGREAVAPENVADHFKLSKESAAFLLSKLAREGKIKISVGQ
                     NK"
     gene            complement(2006..2365)
                     /locus_tag="VK429_03715"
     CDS             complement(2006..2365)
                     /locus_tag="VK429_03715"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HLN90946.1"
                     /translation="MNPETVEKFLKLIGDSSRLKILSSIGAGEKTVSEIIADSGLPQT
                     LVSFHLKILRDREVVVANRKGGPFVHYRLRDPSIMNLLQACDVYAGKFDGSGEEAPEF
                     EWPPWKMMCRRMRCGRP"
BASE COUNT          523 a          831 c          640 g          525 t
ORIGIN      
        1 atccggggag ttcaccagcc aggccaagat cgcctgcagc gagggcatta cccgtgcccg
       61 ggtgacccaa gtcatgggca tggggtcatc acaaatcaca gcgaccagcc ccaagagttc
      121 cacaaaatct tgaactagtt accccgccgt cccactccga cgcgtgcctc gaccgaagca
      181 ccaatttaag tccctcaggt aaaacgggtt ttcgcggcgg taggatctgc cgcaggcgta
      241 acctcgggag cgcatttccc ggacgaagtc tccggaacgc cttccttccc cggttgcgca
      301 aggtcgtcaa agagcagccg gatcttcatg gagcctaccg tcatggccag cgccgccacc
      361 tcgttcagtt cctcctcggt cgcccccgcc tgccttgcaa ctgcaaggca atagttcgtt
      421 caggaatcgc aggcagccgc gagggaagcc cccagcgcga ccaggtgctt ggtcttccgg
      481 tcgagtaccc cggtgttgaa cacggaatga aagaaatcct ggaacttccc catgtgatcc
      541 gccacgtccc cctcctcttc ttcttgtata tgcgaagcat cggccgcttc ttcccgtttc
      601 cgcaagacca ccccgaacaa ctcccgtgga agacttccct cctgcatgcg ccgaagatcg
      661 aggagctcgt agccggtggc gaggctccgg attttctcct cgctgaagaa atggacgacg
      721 aaaccgccga tgtcgtacat ctcctccgcc ttgtgggttc ccgccccgtg gtgcttatcg
      781 aaagtgttcc gcacggaata gagcgcatgg ccgcccgtct tgagcacccg gcgaacctcc
      841 ccgaggagaa acatcagctc tgatgtcgac agctccatgc ataacagcat gtgggagtag
      901 caggcgtcga aggacccgtc ggggaaaggc agtgccttcc gtacatcgaa gacctgtgtg
      961 gaaatccgat cggaaacccc gatctccctg gccgacccct gcaggttgag tagtccagtt
     1021 tccgaataat ccagcgccgt cacatggaac ccttccttcg cgaaaagcag cgtgtcccgc
     1081 ccctggccgc atcccagctc cagaatagat cgcacgctcg cgcccttgaa gagattcaac
     1141 gccgtgtgtg cgaattcact ctccccgtcg ccgaagaacg ccggattctc ggcgtaggtc
     1201 ttgtcccagt ggccttcttg accggtggac ggcatcctat tgcccgccgc tattcggaga
     1261 tgtccttctt catccgctcg aattcttccc gggagatctc acccttggcg taccgcatct
     1321 tgagcacgtc catcggggat tgggatccgg tgctcccacc gccctgtcct ccccagccgc
     1381 agaatgggcc gctcccgccg aaaccccggg tgaacacgaa gtagataatg aacaggaaga
     1441 caacgagccc gatcaggggg aatatccaca ttccccctcc ccagaacatc catggtccca
     1501 tcggcatgcc tccccaggtc ggcgcaatgg aacgcgcata atgtctcccg tagaaaactt
     1561 ccgaggcgat ccccagaaac accagcagga tcaatgcaac gaccaatacc gcgaaaccgg
     1621 tccggaagcc cttcatttat tttgtcccac gctgattttg atcttccctt cccgggccag
     1681 cttggaaaga aggaaggccg cgctctcttt cgacaacttg aagtggtccg ccacattttc
     1741 cggggcgacg gcttcccgac cctttaggaa ttcgaggatc tccatctcga tctggccgag
     1801 ccattcctcg aacagggacc gaagctcggg ggtggcgtag gtcgccatct ccgccgattt
     1861 cgtgatggaa ccgatcatcc ccttgcacat ctccatcggg ttgaaacctt ctcccatcat
     1921 tcccttcatc atctctcgag gatccatgat tgcccccttc gcgcgatatt ttccccgtgg
     1981 actgttccct tcgactcccg gcgggctatg gccgcccgca gcgcatcctc cggcacatca
     2041 tcttccaagg gggccactcg aactccggag cttcctcccc cgatccatcg aatttccccg
     2101 cgtagacgtc gcacgcctgc aggaggttca tgatggaagg gtcccgcaag cggtaatgca
     2161 cgaaaggtcc tcccttccgg ttggcaacga caacttcccg atcccgcagg atcttgaggt
     2221 ggaaggaaac gagcgtctgc ggcaggcccg aatcggcgat gatctccgaa acggtcttct
     2281 ctcccgctcc gatgctcgac aggatcttca gccggctcga atccccgatg agcttaagga
     2341 atttctctac ggtttccgga ttcaccgatg tatatgttct cccttatatg agtagaaact
     2401 tatattatca atgaaaacat ctggcgtcaa cacgatacca gccgtcaggg aggactcgaa
     2461 gccccacggg tttccctagc aacctctcga gatttcgacc tattgtttgg cgtgtaaca
//
LOCUS       DATGYW010000267         1895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_293058, whole genome shotgun sequence.
ACCESSION   DATGYW010000267 DATGYW010000000
VERSION     DATGYW010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293058"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..371
                     /locus_tag="VK429_03720"
     CDS             <1..371
                     /locus_tag="VK429_03720"
                     /inference="COORDINATES: protein motif:HMM:NF024503.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HLN90947.1"
                     /translation="PPPARSGGRLAAGGGGGQGTVRPSPELLDYFRRLEEKVRSSWVV
                     PGTLGRNAAKLVVELRIVIEKDGRVSEDRIERGSGNLYFDDSVRRAIRKASPLPVPPE
                     QLRGGEDHYEVGFRFHGGAE"
     gene            368..1681
                     /locus_tag="VK429_03725"
     CDS             368..1681
                     /locus_tag="VK429_03725"
                     /inference="COORDINATES: protein motif:HMM:NF015980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90948.1"
                     /translation="MKRSVCAAAGAFLLALSLFPSPGFPLLYIDINAPGGKRMPIAVA
                     DFVVGRGDPSLSRGIPKILSDDLALTDLFDLVPPTAHIETVTGAHFSGKPLSFGGWKM
                     IGAEAVVIGLAEVRGDQLSIEMRLYDATQGTLMVAKRYTGTPTQLRSIVHRFANEIVF
                     TFTGVRGVFGTEIAFTARPEKSRGKEIYVVGMDGQGLRKVTDNRSFNLFPRWSPDGQW
                     LAYTSFRTGMPIVYLRNVLTGAEKEVLRFGGSKTPGGFSPDGVWLYAGVSQAGNSDIY
                     RVRVVGGAVEKIVEGWGLEVSPSPSPDGRRIAFVSDRSGSPQIYVKTIGIAGETRISN
                     GAGYATSPSWSPAGDRIAYTVRSGGRFIVATAAPDGSGYREVASPPDGDCEDPSFSPD
                     GRSLVYTYRKKDYSALKIISSDGRRQRTLVSGLKEVGSPAWSPGR"
BASE COUNT          315 a          610 c          645 g          325 t
ORIGIN      
        1 ctccccctcc tgcgcggtcc ggcgggcgct tggctgcggg cggcggcggg gggcagggaa
       61 ccgttcgtcc ttccccggag ctgctcgact atttccgccg gctcgaggaa aaggtccgga
      121 gcagctgggt cgtccccggg acgctgggcc ggaacgcggc gaaactcgtg gtggagctgc
      181 ggatcgtgat cgaaaaggac ggccgcgtct ccgaggatcg gatcgagcgg ggttccggga
      241 acctctactt cgacgattcg gtgcggcgcg ccatccggaa ggcgagccct ctcccggttc
      301 ccccggaaca acttcggggc ggggaggatc attacgaggt gggattccga ttccacgggg
      361 gtgcggagtg aagcgatcgg tctgcgcggc ggcgggtgcg ttccttctcg cgctatccct
      421 gttcccctca ccggggttcc ccctcctcta catcgatatc aacgcccccg gcgggaagcg
      481 gatgccgatc gcggtggcgg actttgtggt cggcaggggc gatccgtccc tctcccgcgg
      541 gatcccgaag atcctctccg acgatctcgc cctcaccgac ctgttcgacc tggtcccgcc
      601 gaccgcccac atcgagacgg tgacgggggc gcacttctcc ggcaagccgc tgtcgttcgg
      661 cggctggaag atgatcggag ccgaagcggt ggtcatcggc ctggccgagg tccggggcga
      721 ccagctctcg atcgagatgc gtctctacga cgccacgcag ggaacgctca tggtcgcgaa
      781 gcggtacacc ggcaccccga cccagctccg ctccatcgtc caccggttcg ccaacgagat
      841 cgtgttcacc ttcaccgggg tccggggcgt cttcgggacg gagatcgcgt tcaccgcacg
      901 cccggaaaaa tcgaggggga aggaaatcta cgtcgtcggg atggacgggc agggtctgcg
      961 caaggtgacc gacaaccgga gcttcaacct ctttccccgc tggtcgcccg atgggcaatg
     1021 gcttgcctac acctctttcc ggaccggcat gcccatcgtc tacctgcgca acgtcctgac
     1081 cggggcggag aaggaggtcc tccggttcgg cgggtcgaag accccggggg gattttcgcc
     1141 cgacggggtg tggctctacg ccggcgtgag ccaggccggc aattccgaca tctacagggt
     1201 ccgcgtggtc ggaggcgcgg tggaaaagat cgtggaaggg tgggggctcg aggtttcccc
     1261 ctcgccgtcg cccgacgggc ggcggatcgc gttcgtctcc gatcgcagcg gttccccgca
     1321 gatctacgtg aagacgatcg gcatcgcggg agagacgagg atctccaacg gggcaggcta
     1381 cgcgacgtcg ccgtcctggt ctcccgcggg agaccggatc gcctacaccg tccggtccgg
     1441 tggacggttc atcgtggcga ccgccgcacc cgacggatcc gggtacaggg aagtcgcgtc
     1501 cccgccggat ggcgactgcg aagacccgtc cttttccccc gatggccgct ccctggttta
     1561 cacgtacagg aaaaaggact attctgcgct taaaatcatc tcttcggacg gccggaggca
     1621 acgaacgctc gtttccggcc tcaaggaagt aggttcaccc gcctggtcgc ctggacggta
     1681 gcttgcaggg cgttcgcgcg cccggatgca ttcatcaaaa ggaggggaac agaatgaagg
     1741 ggaacagttc atggaaatgg gccgtgctgg cgttgtccat cgccgcattg atgtcggtgg
     1801 ggtgcgccaa gaagcagacg gtgaaatccg aaggcaccca ggctccttcc gcagccgccc
     1861 cggttactga agcgcccgtg aaagaaacgc cgcct
//
LOCUS       DATGYW010000268         2296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_293185, whole genome shotgun sequence.
ACCESSION   DATGYW010000268 DATGYW010000000
VERSION     DATGYW010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2296
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293185"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(118..600)
                     /locus_tag="VK429_03730"
     CDS             complement(118..600)
                     /locus_tag="VK429_03730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1850 domain-containing protein"
                     /protein_id="HLN90949.1"
                     /translation="MARRLSLLLLAAAGAVFLFRPATVLEFENAGQGIVARYPVNTGD
                     AFSITYQHSIYRQPVVEEFSVGPGGELVLTGVRSDSGAVLEYFGFSDSRPFHAMNRPM
                     RTIVFRVAMEGAQTLTLGGRRISFLRLGDPGDRITLRLADVSLATRGVGWAARQMRRM
                     "
     gene            complement(613..1569)
                     /locus_tag="VK429_03735"
     CDS             complement(613..1569)
                     /locus_tag="VK429_03735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013902736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HLN90950.1"
                     /translation="MKRAILITLALALIALSAQAQEKTRLSIVTGGTGGVYYPLGGAI
                     ANVLSKYLPGVVATAEVTSASIDNLKLIGADRADIAFTMADSAWEGFNGTGKFKGKIP
                     LRALAVLYDNKTQVVTVQGRGIEKMSDLKGKRISTGAAESGTELIALRLLEAYGIDPE
                     KDVKRAKLSVAESVGAIKDNKIDAFIWSGGLPTAAVIDLAASPGMKIKLLDHSDAIPA
                     MVKKYGPLYVKDTIPAKTYPGQEKDVSILSVWNILAVNEKMDDKLAYAITKTIFEKKP
                     ELVAVHKEAQHLALENQLKGGSPIPFHPGAFMYFAEKGLKRS"
     gene            complement(1666..>2296)
                     /locus_tag="VK429_03740"
     CDS             complement(1666..>2296)
                     /locus_tag="VK429_03740"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLN90951.1"
                     /translation="YAAVAILAALRERDGSGLGQRIDLSLMDSAISWLANVGSNYLVS
                     GEVCGRYGNAHANIVPYQVFLAKDRHIAVGIGNDGQWRKFCEIAGVRDLASDGRFATN
                     PDRVKNRVELIPLLEGIFLRRDSSFWIENLWREGIPAGPINTVDRVFADPNTAAREMV
                     IEMDHPAAGKVRLIGSPMKFSGTPVEYRLPPPLLGEHTASVLKERLGLE"
BASE COUNT          395 a          744 c          714 g          443 t
ORIGIN      
        1 aatttttcgg cttccttgag ggcctcctcg ctgaccccaa cttccagccc gggggttgcc
       61 cgcccggttt cctcaacgcg cctgtcggtc accgccttct ccaggtcatg cgaagggtta
      121 catccgccgc atctgtcttg cagcccaccc gactccccgg gtcgccaggg aaacgtccgc
      181 cagccggagc gtgatccggt cgccgggatc gcccagtctg aggaacgaga tacgccggcc
      241 gcccaaggtc agtgtctgtg ccccttccat ggcgacccga aacacgatcg tccgcatcgg
      301 ccggttcatg gcgtggaacg gccgggagtc gctgaatccg aaatactcca ggacggctcc
      361 gctgtcgctg cggacgccgg tcaggaccag ttccccgccc gggcccaccg agaactcctc
      421 aaccaccggc tggcggtaga tggagtgctg gtatgtgatg gagaacgcat cccccgtatt
      481 cacggggtac cgggcgacga tcccttgccc ggcgttctcg aattcgagca cggtcgccgg
      541 ccggaagagg aaaaccgccc ccgcggcggc aaggagcagg agggacagcc gccgcgccat
      601 gctcacgccg gatcaggacc tcttcaagcc cttctccgcg aaatacataa aggcgccggg
      661 atggaacgga atgggcgatc cccccttgag ctggttctcg agcgcgaggt gctgggcttc
      721 cttgtgcaca gccacgagct ccggcttctt ctcgaagatc gtcttcgtga tcgcgtaggc
      781 cagcttatcg tccatcttct cgttgaccgc caggatgttc cagaccgaga ggatgctcac
      841 gtccttctcc tggccgggat acgtcttcgc ggggatcgtg tccttgacgt acagaggccc
      901 gtattttttc accatggcgg ggatggcgtc ggaatggtcc aggagtttga tcttcatgcc
      961 cggagaggcg gccaggtcga tcaccgcggc cgtgggaagg ccgcccgacc agatgaaggc
     1021 gtcgatcttg ttgtccttga tcgcgcccac cgattccgcc acgctgagct tcgcgcgctt
     1081 gacgtccttc tcgggatcga tcccgtaggc ttcgaggagc cgaagcgcga tgagctccgt
     1141 gccgctttcg gccgcgcccg tggagatcct cttccccttc aggtcgctca tcttctcgat
     1201 ccccctgccc tggacggtca cgacctgggt cttgttgtcg tagaggacgg cgagggcacg
     1261 caggggtatc ttccccttga attttcccgt gccgttgaag ccctcccagg cgctgtccgc
     1321 catggtgaag gcgatgtccg ccctgtcggc gccgatgagc ttcaggttgt cgatcgaggc
     1381 gctcgtcacc tcggcggtgg ccacgacccc cggcaaatat ttggagagca cgttcgcgat
     1441 ggccccgccc aggggatagt acacgccgcc cgttccgccg gtgacgatgg acagccgcgt
     1501 tttttcttgc gcttgggcgg agagggcgat aagggccaga gcaagggtga tcagaatggc
     1561 tcgtttcatg aaagacctcc ttgtcccgca tggacccagt agataagaaa acaacgttat
     1621 aatatacgat gcaagatcag aaaacgattg ggaaagacgg gatccctatt cgaggccgag
     1681 ccgttccttc agcacggaag cggtatgctc gcccaggagg ggcggtggga gccggtactc
     1741 caccggtgtc cccgagaact tcatggggga tccgatcagc cggaccttcc cggctgcggg
     1801 atgatccatc tcgatgacca tttcccgggc ggcggtgttc ggatcggcaa agaccctgtc
     1861 cacggtgttg atcggtccgg cggggatccc ctccctccac aggttttcga tccagaagga
     1921 gctgtcgcgg cgaaggaaga tcccctccag gagcgggatc agctcgaccc ggtttttcac
     1981 ccggtccgga ttggtcgcga accggccgtc cgaggccagg tcccggacgc cggcgatttc
     2041 gcagaacttc cgccactggc cgtcgttccc gatcccgacc gcgatgtggc ggtctttcgc
     2101 caggaacacc tgatagggga cgatgttcgc gtgggcgttg ccgtaacgac cgcagacttc
     2161 ccccgaaacg aggtagttgc tccccacatt ggcgagccat gagatcgccg agtccatgag
     2221 cgaaaggtcg atgcgctgcc ccaggccgct tccgtcccgc tcccggagcg ccgccaggat
     2281 cgcgacggcg gcgtac
//
LOCUS       DATGYW010000269         1579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_293257, whole genome shotgun sequence.
ACCESSION   DATGYW010000269 DATGYW010000000
VERSION     DATGYW010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293257"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1579
                     /locus_tag="VK429_03745"
     CDS             <1..>1579
                     /locus_tag="VK429_03745"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HLN90952.1"
                     /translation="EFVAAAMARSAEVVVIASATREKRGIADLSRMGVPPTHILDRDG
                     FSLPEEMPDPLTPEGRLNPDYASGFTRPAQALGKALWKVFGPRVSPDVVVDRVDQDTL
                     HFSTFVARDFDERDVFPCGTVVLRAKSDLSIRGSHMYGASQAAEVVRLLSSGKIAMDQ
                     EDLEITDLRGLPRLQQMMLDGTMRKPKGVALVQADRPGRTVADYEEAFRGETVQSADP
                     SARKFVDVRMAGDVAVVTLTRPDSLNALSEELLSQFAAVVREAGSLGTICGRNVKAIV
                     LTGAGRSFVAGADVKEFHGKTADVVDALAWKNISVFTELENLSLPVVALVDGFALGGG
                     NELAMSAHYRIVTENALLGQPEVKLGIIPGYGGMQRLPRLIGPSKAAEICVNGEPVDG
                     STAVSLGWADEFVPSSASLSRAVAAARDFAAGNRPLPRREWDALAGRWKEELASLFAR
                     PEVKAILDAPTPGKETAGNLRAARLAAARDALLAMKHGFERGFAGGLRNDATVFGAVA
                     ASPGGQEWVGRFLAKDAA"
BASE COUNT          246 a          533 c          552 g          248 t
ORIGIN      
        1 gagttcgtgg ctgcggcgat ggcacgctcc gcggaggtcg tcgtgatcgc ctccgcgacg
       61 cgggagaagc gcggaatcgc cgacctctcc cggatggggg ttccgcccac ccacatcctc
      121 gaccgcgacg gattctccct ccccgaagag atgccggacc cgctgactcc ggagggccgc
      181 ctcaaccccg actacgcatc cggcttcacc cgtcccgcgc aggcgctcgg gaaggcgctc
      241 tggaaggtgt tcggcccgcg cgtctccccc gacgtcgtcg tggaccgcgt cgaccaggac
      301 acgctccact tcagcacctt cgtcgcgcgg gatttcgacg aaagggacgt cttcccgtgc
      361 gggacggtcg tcctccgggc gaagagcgac ctctccatcc ggggatccca catgtacggc
      421 gcctcgcagg ccgccgaggt ggtgcgtctc ctctcctcgg gaaagatcgc gatggaccag
      481 gaggatctcg agatcacgga ccttcgcggc cttccccgcc tgcagcagat gatgctggac
      541 gggacgatgc ggaagccgaa gggggtcgcc ctggtgcagg cggaccggcc ggggcggacg
      601 gtggccgact acgaggaggc tttccgggga gagaccgtcc agtcggccga tccttcggcc
      661 cggaaattcg tcgatgtgcg gatggcggga gacgttgcgg tcgtcacgct cacccgcccg
      721 gattccctca acgccttgag tgaggaactc ctgtcgcaat ttgccgccgt cgtccgggag
      781 gccgggtccc tcggaacgat ctgcggtcgg aacgtcaagg cgatcgtcct cacgggggcc
      841 gggcgttcct tcgtcgccgg cgcggacgtc aaggagttcc acggaaaaac cgcggacgtc
      901 gtggacgccc tcgcgtggaa gaacatctcc gttttcacgg aacttgaaaa cctctccctc
      961 cccgtcgtgg cgctggtcga cggcttcgcg ctgggaggcg gcaacgaact cgcgatgagc
     1021 gcacattacc ggatcgtgac ggagaacgcg ctcctcgggc agcccgaggt gaagctcggc
     1081 atcatccccg ggtacggggg gatgcagcgt ctcccccggc tgatcgggcc atcgaaagcg
     1141 gcggaaatct gcgtcaacgg ggaaccggtg gacgggagca cggcggtgtc gctcgggtgg
     1201 gcggacgagt tcgtcccgtc ttccgcctcc ctttcacgcg cggtcgccgc agcgcgcgac
     1261 ttcgcagcgg ggaatcgccc gttgccacgg cgggagtggg acgcattggc cggcaggtgg
     1321 aaggaagaac ttgcgagcct cttcgcccgc ccggaagtga aggcgatcct cgatgccccg
     1381 accccgggaa aggagaccgc gggaaatctg cgcgcggcgc ggcttgcggc agcccgggac
     1441 gccctccttg ccatgaagca cgggttcgag cgcgggttcg cggggggctt gcgcaacgac
     1501 gcaacggtct tcggcgccgt cgctgcctcc cccggcggcc aggaatgggt cggtcgtttc
     1561 ctcgcaaagg acgccgccc
//
LOCUS       DATGYW010000270         2824 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_399918, whole genome shotgun sequence.
ACCESSION   DATGYW010000270 DATGYW010000000
VERSION     DATGYW010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_399918"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(144..764)
                     /locus_tag="VK429_03750"
     CDS             complement(144..764)
                     /locus_tag="VK429_03750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020713818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HLN90953.1"
                     /translation="MVTRILEALAGFVIFVISSLGLPGIVLLMAIESACIPLPSEVIM
                     PFSGYLVYKGVHTLWEVSLAGAFGCVAGSVPAYYLGMYGGRPLIEKYGKYILMSRHDL
                     DLADRWFTRHGEVTVFLARLLPVIRTFIAFPAGVARMDMKRFLLYTFAGSFPWCLGLA
                     YLGMVLGEKWPTLREYFHRFDLLIGAVLVAGVVWYVRRHLKNRVKE"
     gene            complement(802..2196)
                     /locus_tag="VK429_03755"
     CDS             complement(802..2196)
                     /locus_tag="VK429_03755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010941561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HLN90954.1"
                     /translation="MSEAAALSELPLSRILSALLSRGGEHGELFFEEARSLTVLLEDG
                     RIERVVSGTDAGIGVRLLFRGKTYYAYTNDRSTESLLALSNDLSRYAEGGGVAAALPA
                     SVQSACGPTVVRVPPASRGIGEKVALVREVDRIAREFSREVRQVRATWSESLRRIEVA
                     AHPGVFMREEQTYCVLAVQAVAGDDGGLTMGYESAGGTDGLEFLDDGVPSLLARKAAG
                     RAVRALNAAKLPGGRMPVVLSSEAGGTMVHEAVGHGLEADLARRGMSVYKEKLGERIG
                     SPLVSIADDATVPGKRGSYGIDDEGIPGQRTLLVDGGVLKGFLHDLLSAIKDGVAPTG
                     NGRRESYRHKPIPRMTNTLILPGETAPGEILSGADRGLQVVKMGGGQVNTVTGDFMFE
                     VAEGYRIEGGKRGEPVRGATITGNGPEVLSMIDRVGTDLGFGIGTCGKEGQGVPVGDA
                     QPTLSIGPPFITVG"
     gene            2267..>2824
                     /locus_tag="VK429_03760"
     CDS             2267..>2824
                     /locus_tag="VK429_03760"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLN90955.1"
                     /translation="MRILVATGALALLLFSAQACAFSPKAIPANAQAGSQAYSQFLAG
                     YLDSREGNLDGALESYRKALKYAGEEPDILYEIANVLVKKGRLPEARVELEKALAVDE
                     GHTRSRYLLAGILAASGDRDKALAEYDRVLKEDPENDEVYLHIATLYAEQGEFSKAEE
                     VLDALIARDPDSHLAYYYRGRVRAAR"
BASE COUNT          504 a          969 c          921 g          430 t
ORIGIN      
        1 gcgttccgcg tcatgcgcct cctgcgcgaa gaagagaagt gaccgtcgag ttgagttccc
       61 gacgggtgtc catcgcccgc cattgcggag aagcgcaggt ccggcgggca cctgatgagg
      121 ggaagcaccg aagagtgaac aaactactcc ttgacgcggt tcttgaggtg cctccggacg
      181 taccagacga ctcccgcgac caggaccgcg ccgatcagca ggtcgaaccg gtggaaatat
      241 tcccgcagcg tcggccactt ctcccccagc accatcccga gatacgcaag ccccaggcac
      301 cacggaaacg accctgcgaa ggtgtagagg aggaaccgct tcatgtccat ccgcgcgacc
      361 ccggcgggga aggcgatgaa ggtgcggatc accgggagca gacgggcgag gaagacggtc
      421 acctccccgt ggcgggtgaa ccaccggtcg gccagatcga ggtcgtggcg ggacatgagg
      481 atgtacttcc cgtacttctc gatgaggggc cggccgccgt acatcccgag gtagtaggcg
      541 ggcaccgacc ccgccacgca gccgaaggcg ccggccagcg acacctccca gagcgtgtgc
      601 acccccttgt aaacgaggta cccggagaac ggcatgatca cttcggacgg cagggggatg
      661 cacgccgact cgatcgccat caacaggacg atgccgggca gcccgaggga cgaaatgacg
      721 aagatgacga agcccgcgag ggcttcgagg atgcgcgtta ccaagggttc actcccggaa
      781 gcaggatgac agcattgcgg gttaccccac cgtgatgaac ggcgggccga tcgagagggt
      841 cggctgggcg tccccgacgg ggacgccctg gccttctttt ccgcacgtgc cgatgccgaa
      901 cccgaggtcc gttccgacgc ggtcgatcat cgagagaacc tcggggccgt tccccgtgat
      961 cgtcgcaccg cggaccggct ccccgcgctt cccgccttcg atccggtacc cctccgccac
     1021 ctcgaacatg aagtcgccgg tgacggtgtt cacctggccg cctcccatct tgacgacctg
     1081 caatccccgg tcggcaccgg aaaggatctc ccccggggcc gtctccccgg gaaggatgag
     1141 cgtgttcgtc atgcggggga tcggcttgtg gcggtacgac tcgcgccggc cgtttcccgt
     1201 gggggcgacg ccgtccttta tcgccgacag aaggtcgtgg agaaacccct tcaggacccc
     1261 gccgtcgacc agcaaggtcc gctgcccggg gatcccttcg tcgtcgatcc cgtacgagcc
     1321 gcgcttcccg gggacggtgg cgtcgtcggc gatggagacc agcgggctcc cgatccgctc
     1381 ccccagtttc tccttgtaga ccgacatccc ccgccgggcg aggtccgcct ccaggccgtg
     1441 cccgaccgct tcatgaacca tcgtcccccc cgcttcggag gagaggacga ccggcattcg
     1501 cccgccgggg agcttcgccg cgttgagcgc ccgcaccgcc ctcccggcgg ccttgcgggc
     1561 aaggagcgag ggaaccccat cgtccaggaa ttcgagccca tcggtcccgc ccgccgattc
     1621 gtatcccatc gtcaggccgc cgtcgtcccc cgccacggcc tggacggcga ggacgcagta
     1681 cgtctgttcc tcgcgcatga agacgccggg gtgggcggca acctcgatgc ggcgcagcga
     1741 ctccgaccag gtcgcccgga cctgccgcac ctccctggag aattccctcg cgatccggtc
     1801 gacctcccga acgagcgcga ccttctcgcc gatcccccgg gacgccggcg gcacacggac
     1861 gacggtcggc ccgcaggccg actgtaccga cgcggggagc gcggcggcga cgccgccccc
     1921 ttccgcatag cgggagaggt cgttcgaaag ggcgaggagg gattcggtcg accggtcgtt
     1981 cgtgtaggcg taatacgttt ttccgcggaa gaggaggcga acgccgattc ccgcgtcggt
     2041 ccccgaaacg acccgttcga tccggccatc ctccaatagg accgtgaggg accgggcttc
     2101 ctcgaaaaac agctccccgt gctccccacc gcgggacagc agcgcggaga ggattctcga
     2161 aaggggcagt tcggagagag cagcggcctc ggacatcggt cctcctcgcg gtttcccggg
     2221 tagagagtat ataatacaaa cggtttatat ttttccggag gaacggatgc gaatcctcgt
     2281 cgccacgggg gccttggccc tccttctttt ttccgcccag gcatgtgcat tcagcccgaa
     2341 agcgatcccg gcgaacgccc aggccggatc gcaggcctac agccaattcc tcgccgggta
     2401 tctcgactcc cgggagggga acctcgacgg ggcgctcgag tcgtacagga aggccctgaa
     2461 gtacgccggg gaggagcccg acatcctcta cgagatcgcg aacgtcctcg tgaagaaggg
     2521 tcggctcccc gaggcccggg tggaactgga aaaggctctg gcggtcgacg aggggcacac
     2581 gcggtcccgg tatcttctgg cggggatcct cgccgcgtcg ggcgatcgcg acaaggccct
     2641 cgccgaatac gaccgcgtcc tgaaggagga cccggagaat gacgaggtgt acctccacat
     2701 cgccaccctc tacgcggaac agggggaatt ttccaaggcg gaggaggttc tcgacgccct
     2761 gatcgcccgg gaccccgatt cccacctggc gtactattac cggggccgcg tccgtgcggc
     2821 ccgg
//
LOCUS       DATGYW010000271         3814 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_239465, whole genome shotgun sequence.
ACCESSION   DATGYW010000271 DATGYW010000000
VERSION     DATGYW010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3814
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239465"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..848)
                     /locus_tag="VK429_03765"
     CDS             complement(45..848)
                     /locus_tag="VK429_03765"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015589809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HLN90956.1"
                     /translation="MRTIEFTDTEFMIAQGARLIEDGKTIFVGWGIPQVVAMLAQKLY
                     VPNVTQLFEFGAIGPQSILPFVRGTMGGPQNTYRSLQWLNMNWAFSYSATGYMDYGML
                     GALQVDPYGNINSTHLGGTFAKPERRFAGSGGGNQVASHCWKTIIVIKHEGRRFVPKV
                     DFLTSPGYLDGAGAREKAGLPRGTGPHRVVTSKALFGFDEATRKMVLLSVLRGLSVEE
                     VVKDMAFRPLLAPEIGEIMPPTDDEIRVLREEIDPARFIIRGEKMSATA"
     gene            complement(849..1826)
                     /locus_tag="VK429_03770"
     CDS             complement(849..1826)
                     /locus_tag="VK429_03770"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012966274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HLN90957.1"
                     /translation="MTIERIRTEGPVEYRFTHPDDFRDHVRDRKGRSPVPKLVTAKEA
                     VGSFVSDGDYIVYDFSSLTRGPQSLIREVIRQRKKELWIGAEFTLHESPLLVGAGCAT
                     RIDVGFLGYGNYIGQAVCDGRVKAYEWTNGGLALRILAGARGVPFLPTRDLLGSDNMK
                     VSAAKTITDPYTGDPVCLVPALNPDVAFLHVHQADVFGNARIFGTNLFALEAALASFR
                     VIVSAEEIVETDEFRKDPMRTTVPYFLVDAVVHAPFGAYPGAMPARYEIDLEHVDRLN
                     AIRTDEQMGKYLEENIHSVADHEEFLDRRVGAKRMRELRRRATITEGYR"
     gene            complement(1823..2824)
                     /gene="meaB"
                     /locus_tag="VK429_03775"
     CDS             complement(1823..2824)
                     /gene="meaB"
                     /locus_tag="VK429_03775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0015819 - lysine transport [Evidence IEA];
                     GO_process: GO:0015822 - ornithine transport [Evidence
                     IEA];
                     GO_process: GO:1903826 - L-arginine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HLN90958.1"
                     /translation="MTAAGREILAGNTRAAARLMRDLDDEIPTAIRTLKDIYRHTGRA
                     YILGVTGAPGAGKSTLVNRITTHLRKRGKSVGIVAIDPTSPYSGGAILGDRIRMQQHA
                     LDEGVFIKSLATRGHLGGLSRSTIDIVNVMDAMGKDVILIETVGVGQDEVEIVKVAHT
                     NLVLVVPGLGDDIQAIKAGILEIADIFVINKADRDGADKAKREIETMVSMGNFKEGEW
                     KPPVLSAVAATDKGTAELLEAVDRHKKYIYQEGNLSRYRREKARVELVEILKTQLIEK
                     AVSDLDAHGLLDPLLADMARKRKDPYSISEKVVDHSFAFHFLNGGKQRSTKGRGKRR"
     gene            complement(2830..>3814)
                     /locus_tag="VK429_03780"
     CDS             complement(2830..>3814)
                     /locus_tag="VK429_03780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002616683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLN90959.1"
                     /translation="VPEEYGGSGMDTVSYAVAVEEISKGDGSLGLTVASHNSLCTAHI
                     LGFGSEAVKRKYLPELASGKALGAWGLTEPGSGSDSLAMRTKAEWKKDRWVINGSKMF
                     ITQGNIAGVYVVLAVTDREKGKDGVTAFVFPAGTKGLSVGKTLHKLGMRSSDTAELVF
                     EDLEVGPDAVVGQVHSGFRDTMKNLAGGRISIAALSVGIGLGAMREALAYSKERVQFG
                     QAVSEFQAIQWMFADMGTELEAAELMTFRAAALKDAGRPYTREAAMAKLFASEAAMRA
                     TIKAVQVFGGYGYTQEYPAERYMRDAKLCEIGEGTSEVQRIIIARDLIRSH"
BASE COUNT          613 a         1313 c         1167 g          721 t
ORIGIN      
        1 gctgcatggg agcagattat agcatccgcc cggtcggtta ggggtcaggc ggttgcggac
       61 atcttttccc cgcggatgat gaagcgggcg gggtcgatct cctcccgcag cacccggatc
      121 tcgtcgtccg tcggcggcat gatctcgccg atctcgggcg ccagcagggg ccggaacgcc
      181 atatccttca cgacctcttc caccgaaagc ccgcggagga ccgaaaggag gaccatcttc
      241 cgggtcgcct cgtcgaaccc gaaaagcgcc ttcgaggtga ccacgcgatg ggggcccgtg
      301 ccacggggga gccccgcctt ctcacgggcc cctgccccgt cgagataccc cggggatgtg
      361 aggaaatcga ccttcggaac gaaccggcgg ccctcgtgct tgatgacgat gatcgtcttc
      421 cagcagtgcg aggccacctg gttccctccc ccgcttcccg cgaaccttcg ctccggcttc
      481 gcgaacgtcc cgccgaggtg ggtcgagttg atgtttccgt acgggtcgac ctgaagggcc
      541 cccagcatcc cgtaatccat gtagcccgtg gcggagtagg agaaggccca gttcatgttg
      601 agccactgca gcgaccggta cgtgttctgc ggccccccca tcgttccccg gacgaagggc
      661 aggatcgatt gcggcccgat cgccccgaat tcgaacaact gggtcacgtt ggggacgtac
      721 agcttctgcg ccagcatggc gaccacctgc gggatgcccc acccgacgaa gatggtcttg
      781 ccgtcttcga tgagacgggc gccctgggcg atcatgaact ccgtgtcggt gaactcgatc
      841 gtgcgcattt aacggtaacc ctctgttatg gtggcgcgtc ggcgcagctc ccgcatccgc
      901 ttcgcaccga cccggcggtc taggaactcc tcgtggtcgg cgaccgagtg gatgttctcc
      961 tcgagatatt tccccatctg ctcgtccgtg cggatggcgt tcaggcggtc gacgtgctcg
     1021 agatcgatct cgtaccgcgc cggcatcgcg ccgggatacg cgccgaaggg ggcatggacc
     1081 accgcgtcga ccaggaaata cgggaccgtg gtccgcatcg gatccttccg gaattcgtcg
     1141 gtctcgacga tctcctcggc cgagacgatc acgcggaacg atgccagcgc cgcctcgagg
     1201 gcgaacaggt tcgtcccgaa gatcctcgcg ttgccgaaca cgtcggcctg gtggacgtgc
     1261 aggaaggcga cgtcggggtt caaggcgggg acgaggcaga caggatcccc cgtgtacgga
     1321 tccgtgatcg tcttcgccgc ggagaccttc atgttgtcgg aaccgagcag gtcccgggtc
     1381 ggaaggaacg gaacgccgcg ggcccccgcg aggatccgga gggcgagccc cccgttcgtc
     1441 cattcgtacg ccttgacgcg cccgtcgcag accgcctggc cgatgtaatt tccgtagccg
     1501 agaaagccga cgtcgatccg ggtggcgcac ccggccccca ccagcaaggg agactcgtga
     1561 agcgtgaatt cggcgccgat ccagagctcc ttcttccgtt gccggatgac ctcccggatc
     1621 aacgactggg gcccccgggt gaggctggag aagtcgtaga cgatgtaatc cccgtcggac
     1681 acgaacgaac ccaccgcctc cttcgccgtg accagcttcg ggacggggct tcggcctttc
     1741 cggtcgcgga catggtccct gaagtcgtcc gggtgggtga aacggtattc gaccggccct
     1801 tccgtccgga tccgttcgat cgtcatcggc gttttcccct ccccttcgtc gacctctgct
     1861 tccctccgtt caggaaatgg aacgcgaagc tgtggtcgac caccttctcc gaaatgctgt
     1921 acgggtcctt ccgctttctc gccatgtcgg ccagcagcgg atcgaggagt ccgtgggcgt
     1981 cgagatccga cacggctttt tcgatcaact gggtcttgag gatctccacc agttcgaccc
     2041 gcgccttttc acggcggtac cgggagaggt ttccctcctg gtagatgtac ttcttgtgcc
     2101 ggtccacggc ttccaggagt tccgccgtcc ccttgtcggt cgcagcgacg gcggagagga
     2161 cgggaggctt ccactccccc tccttgaagt tccccatcga gaccatcgtc tcgatctctc
     2221 gcttcgcctt gtcggctccg tcccggtccg ccttgttgat gacgaagatg tcggcgatct
     2281 cgagaatccc cgccttgatc gcctggatgt cgtccccaag ccccggaacg acgagcacga
     2341 ggttcgtgtg cgccaccttg acgatttcca cctcgtcctg ccccacgccg accgtctcga
     2401 tgaggatgac gtccttcccc atggcgtcca tgacgttcac gatgtcgatg gtggaacggg
     2461 aaagaccccc caggtgcccc cgggtggcga ggctcttgat gaacacgccc tcgtcgagcg
     2521 cgtgctgctg catccggatc cggtcgccga ggatggcgcc gccggaataa gggctcgtcg
     2581 ggtcgatcgc gacgatcccg accgacttcc cgcgcttcct caggtgcgtg gtgatcctgt
     2641 tgacgagggt cgacttcccg gcgcccggcg cccccgtcac gccgaggatg taggcgcgcc
     2701 ccgtgtgccg gtatatatcc ttcagggtgc ggatcgccgt cgggatctcg tcgtccaggt
     2761 cccgcatcaa ccgcgccgcg gcccgggtgt ttccggcgag gatctccctt ccggcggcgg
     2821 tcacggcggt cagtgactcc ggatcaggtc gcgggcgatg atgatccgct ggacttccga
     2881 cgtcccttcc ccgatctcgc acagcttcgc gtcgcgcatg taccgctcgg cgggatactc
     2941 ctgcgtgtac ccgtacccgc cgaacacctg gaccgccttg atcgtcgccc gcatcgccgc
     3001 ctcggaggcg aacagcttgg ccatcgccgc ttcccgggtg tacggacgcc cggcgtcctt
     3061 gagcgccgcc gcccggaaag tcatcaactc ggcagcttcg agctcggtcc ccatgtccgc
     3121 aaacatccac tggatcgcct ggaactccga taccgcctgc ccgaactgca cccgctcctt
     3181 cgaataggcc agcgcctcgc gcatcgcccc gaggccgatc cccaccgaga gggcggcgat
     3241 cgagatccgt cccccggcca ggtttttcat cgtgtcacgg aatccggagt gcacctgccc
     3301 cacaacggcg tcagggccca cctcgagatc ttcgaagacc agttcggcgg tatccgagga
     3361 gcgcatcccg agcttgtgga gagttttccc gaccgagagt cccttcgtgc cggccgggaa
     3421 gacgaacgcg gtgacgccgt ctttcccctt ctccctgtcc gtgacggcaa ggacaacata
     3481 caccccggcg atattcccct gggtgatgaa catcttgctc ccgttgatca cccagcgatc
     3541 cttcttccat tccgcctttg tccgcatggc gagggagtcg gaaccggaac cgggctcggt
     3601 caatccccag gccccgagcg cctttccgga cgccagctcg gggaggtatt tccgcttcac
     3661 cgcctccgaa ccgaacccga ggatatgcgc ggtgcaaagg gagttgtggg acgccaccgt
     3721 caagccgaga gagccgtccc ccttcgagat ctcttccacg gcgacggcgt agcttaccgt
     3781 gtccatcccg gatccgccgt actcctcggg gacc
//
LOCUS       DATGYW010000272         1664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_76287, whole genome shotgun sequence.
ACCESSION   DATGYW010000272 DATGYW010000000
VERSION     DATGYW010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76287"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /gene="cpaB"
                     /locus_tag="VK429_03785"
     CDS             <1..605
                     /gene="cpaB"
                     /locus_tag="VK429_03785"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HLN90960.1"
                     /translation="GETFSVRNLAKKEIPSSGTGRRNVPVSDFELLVGARAKMAIDPG
                     EPVLWTDVEEPYDTDMFSRTVLPGRRAMTLGVDTTSSFAGMLHPGDRVDLLVERSGAN
                     STAWVRDIPVIAVDRDHNRIAHPSDREETATVTLMVTPVEGSRIARASGKVHWFLRNP
                     GDNAATAPRSPAKPVTVRAVEVWKGGVKVPPILAEKENRG"
     gene            602..>1664
                     /locus_tag="VK429_03790"
     CDS             602..>1664
                     /locus_tag="VK429_03790"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HLN90961.1"
                     /translation="MRRLLPLAGRAIAALSLFLPMAPDAGSLASETIRIRPGFQQILE
                     RSGVSRISVGNPDILEAQPLPRDGGILMVGKKEGETDLVLWEKGTRTVWHVEVGSGKR
                     PIAEDARAFAGAFPGVTVIEAGSSVILSGPVTTSQDKTVLEAYALAHPGVHLRLSLPE
                     EKKTLLLYDLKIIEIGRGETAQLGIRWPDALPAKGTFAVGTGNAGTLTVGTDFEARLN
                     LLMANGKARILSNPRLACESGGEAQFLAGGEIPIVIITPESRTVEWKTYGIILKIHPT
                     MTEGGKIRTQVNAEVSAVDHGSGTSDVPGFLTRRVSTLFSTPPGETVMLSGLVKSEMA
                     KDVAKVPLLGQIPVLGELFK"
BASE COUNT          322 a          521 c          554 g          267 t
ORIGIN      
        1 ccggagagac gttcagcgtg cgaaacctcg cgaaaaagga gatcccttcc tccggaacgg
       61 ggcgacgtaa cgtgcccgtc tccgatttcg aacttctggt gggtgcgcgc gccaagatgg
      121 cgatcgatcc cggagagccg gttttgtgga ccgatgtcga ggaaccgtac gacacggaca
      181 tgttctccag gaccgtcctt cccggccgga gggcgatgac gctcggtgtg gacacgacat
      241 cgtcgttcgc cggcatgctg caccctggag accgggtcga cctgctcgtc gaacgttccg
      301 gggcgaattc cacggcctgg gttcgggaca tccccgtgat cgccgtagac agggatcaca
      361 atcgcatcgc acacccctcc gacagggagg agacggccac cgtgaccctg atggtcacac
      421 cggtggaagg aagccggatc gcacgggcct ccggaaaggt gcactggttc ctgcgcaatc
      481 cgggcgacaa cgcggccacc gctccacgct ctccggccaa acccgtgacg gttcgcgccg
      541 tggaggtatg gaagggcggc gtgaaggttc ctccgatcct cgcggaaaag gagaatcgcg
      601 gatgagacgc ctccttccgc tcgccgggcg ggctatcgcc gctctctccc tgttcctgcc
      661 catggcgccg gacgccgggt ccctggcctc ggagacgatc cggatccgcc cagggttcca
      721 acaaatcctc gaacgatcgg gcgtgtcgcg catttccgtc ggaaaccccg atattctcga
      781 ggcccagccc cttccccgcg acggtggaat cctcatggtc gggaaaaagg agggggaaac
      841 cgaccttgtc ctgtgggaaa agggtacgcg gacggtgtgg cacgtcgaag tgggatccgg
      901 gaagcgaccg atcgccgagg atgcccgagc gttcgcggga gcctttcccg gcgtgaccgt
      961 catcgaggcg ggcagttcgg tgatcctcag cgggcccgtg acgacgtcgc aggataaaac
     1021 cgtgctcgag gcgtacgccc tcgcacaccc aggggtccac ctccggctct ccctgcccga
     1081 ggagaagaaa acccttcttc tctacgacct gaagatcatc gagatcgggc ggggggagac
     1141 ggcgcaactg ggcatccgat ggccggatgc gcttcccgcg aagggaacgt tcgccgtggg
     1201 aacggggaac gcggggacgc tcaccgtggg caccgacttc gaggcgcgat tgaacctcct
     1261 catggcgaac ggaaaggcga ggatcctctc caacccgcgc ctggcatgcg aaagcggcgg
     1321 ggaggcgcag tttctcgcgg ggggggaaat tccgatcgtg atcatcacgc cggagtcccg
     1381 caccgtggag tggaagacgt acggcatcat cctcaagatt catcccacca tgacggaagg
     1441 gggaaagatc cgcacgcagg taaacgcgga agtaagcgcg gtggaccacg gaagcggaac
     1501 ttccgacgtc ccgggattcc tcacccgacg cgtgtccacc ctcttctcca cgccgccggg
     1561 ggaaacggtg atgctgtcgg gtctcgtaaa gagcgagatg gcgaaggacg tcgcgaaggt
     1621 cccgctgctc ggacagatcc ccgtgttggg ggaactgttc aagt
//
LOCUS       DATGYW010000273         1604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_239475, whole genome shotgun sequence.
ACCESSION   DATGYW010000273 DATGYW010000000
VERSION     DATGYW010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1604)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239475"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VK429_03795"
     CDS             complement(<1..185)
                     /locus_tag="VK429_03795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HLN90962.1"
                     /translation="MSWVVHSTVPYPMLKEPDTPRMLADAGVGPEIYLSGGALDAITP
                     AEAESVARMLRDAGIRSL"
     gene            379..1044
                     /locus_tag="VK429_03800"
     CDS             379..1044
                     /locus_tag="VK429_03800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012468952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HLN90963.1"
                     /translation="MKKLKIRIDNHMTLRERIVETIRNAIVNGQLAPGARIAEPELAE
                     KFGISRTPIREAFRQLESEGFITVVPRKGAIVASLSPRDIADFYDLKMVLEGYAARCA
                     VSTLKESDLTKMETVNRQIEASSEKKDLRRLLDLHNEFHDIFLRSCGNEKLHAIVQNL
                     VMQFRRFRLILSMPGRIEGSIKQHWEIIDAFRKRDPELAEELVRKNAAYGKKILLREL
                     AKA"
     gene            1058..>1604
                     /locus_tag="VK429_03805"
     CDS             1058..>1604
                     /locus_tag="VK429_03805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011196713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HLN90964.1"
                     /translation="MPDSRGLRSLPSVASLLASDAARAFLRSHPRAVVVDALREVVGA
                     ARAAHGEEPVPLAREAWTDRILSMLPAEIASRESLPMRRVINAAGIVVHTNLGRAPLP
                     GEALAAVLETARGYSNLEFDLAAGERSSRLSHVEGMLRALTGAECAHVVNNNAAAVLL
                     CLAGHARGREVIVSRGELVEIG"
BASE COUNT          279 a          535 c          521 g          269 t
ORIGIN      
        1 agggagcgga tccccgcatc ccggagcatc cgcgcgacgg attccgcctc ggcaggggtg
       61 atcgcgtcga gggccccccc ggagagatag atctccggcc cgacgccggc gtccgcgagc
      121 atccgcggcg tgtccggttc cttcagcatg gggtagggga cggtggagtg gacgacccag
      181 gacatggcct gcctcccggc gggatttccg gagcaacgaa cgtagcccat cccttgatcc
      241 cgcgcaagtg ggcgtcctcc ggccccccct aacgggggga ttcccctgcg atttccgacg
      301 cgatattaaa gggttgacat tttttttgca tactgtatac atgaaatgtt tttatttttt
      361 ttaggcaggg gtaactcatt gaaaaagcta aaaatccgga tcgacaacca catgaccctt
      421 cgcgagcgta tcgtggagac gatccgcaac gccatcgtca acggacaact ggcccccggc
      481 gcccggatcg cggaaccgga actggccgaa aagttcggga tcagcaggac gccgatccgg
      541 gaggcgttcc gtcagctgga gtcggagggc ttcatcaccg tggtgccgcg caagggggcc
      601 atcgtcgcct ccctgtcgcc gcgggacatc gccgacttct acgacctgaa gatggtcctc
      661 gaggggtacg cggcgcggtg cgcggtctct accctcaagg aatccgacct gacgaagatg
      721 gagacggtaa accgccagat cgaggcctcg tcggagaaga aggacctccg tcggctgctc
      781 gacctgcaca atgaattcca cgacatcttc ctgcgctcgt gcgggaacga gaagctccat
      841 gcgatcgtgc agaacctggt catgcagttc cggcgtttcc gcctgatcct ctccatgccg
      901 gggaggatcg aggggtcgat caagcagcat tgggagatca tcgacgcgtt ccgcaagcgc
      961 gatccggagt tagccgagga gctcgtgcgg aagaatgccg cctacggcaa gaaaatcctt
     1021 ctccgggaac tggcgaaggc ctgacccgcc gtcggcgatg cccgattccc gaggactccg
     1081 cagcctcccg tccgtcgcgt ccctgctggc aagcgacgcc gcccgcgcgt tcctgcgatc
     1141 ccatccccgc gccgtggtgg tcgacgcgct ccgcgaggtt gtcggcgccg cccgcgccgc
     1201 ccacggagag gaaccggtcc cgctcgcgcg cgaggcgtgg accgaccgga tcctttcgat
     1261 gctcccggca gagatcgcgt cgcgggagtc cctcccgatg cgccgggtga tcaacgccgc
     1321 cgggatcgtc gtccacacca acctcgggcg cgcgcctttg cccggggagg cgctcgccgc
     1381 ggttctcgaa accgccaggg ggtattcgaa cctcgagttc gacctcgcgg cgggggaacg
     1441 gtcgtcccgc ctctcgcacg tcgaggggat gctgcgcgcc ctgaccggcg ccgagtgcgc
     1501 ccacgtcgtc aacaacaacg ccgccgccgt gctcctctgt ctcgcgggcc acgcccgcgg
     1561 gcgggaagtg atcgtaagcc gcggcgagct cgtcgagatc gggg
//
LOCUS       DATGYW010000274         6040 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_400034, whole genome shotgun sequence.
ACCESSION   DATGYW010000274 DATGYW010000000
VERSION     DATGYW010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 6040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6040
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400034"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..962
                     /locus_tag="VK429_03810"
     CDS             <1..962
                     /locus_tag="VK429_03810"
                     /inference="COORDINATES: protein motif:HMM:NF018805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipocalin-like domain-containing protein"
                     /protein_id="HLN90965.1"
                     /translation="PEFRHEWWYFTGNLRAPGERRFGYQLTFFRFALSPGPPDRRSRW
                     ATTQAYMAHFAVTDVQGNRFHHFERTGRGALGLAGGTARPFRVWLDDWSAEGAEASTL
                     PIRLRAAEQGAAVDLFLDTTRSIVPQGDRGFSRKGAAPGNASHYYSMTRLATRGTVRV
                     DGVSFPVEGNSWLDREWGTSALEKGQAGWDWFALQLSDGRDLMFYRLRREDGGTDPFS
                     AGTLVLPDGSYRPLSPDDVRIEDLESWRSPESGVRYPSRWRLRLPHEGLELEVFPRIA
                     DQELRTAVRYWEGAVGIRGTSRGERVEGEGDVELTGYGETAGR"
     gene            1043..1516
                     /locus_tag="VK429_03815"
     CDS             1043..1516
                     /locus_tag="VK429_03815"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005995341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HLN90966.1"
                     /translation="MTANSKPVSATRLVMAQEMTPQDANPAGNVHGGNIMRLADSAAG
                     VVAIRHSGRNCVTAAVDHFEFHAPVFIGNLVTFHASVNRVGRTSMEVGVRVEAEEPRT
                     GKKTHTNSSYFLMVALDDEGRPVEVPRLILETDEDRRRNEEAMQRAIARRQWKKK"
     gene            1530..1793
                     /locus_tag="VK429_03820"
     CDS             1530..1793
                     /locus_tag="VK429_03820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90967.1"
                     /translation="MTGDRRKRPGSRLLLGIALFAGTLLSMFGGALVAEFALDLLGVA
                     SPPVRLGAKVIAMAAALPAGFYLVERAFLARSSPATSRKTPGP"
     gene            complement(1765..2829)
                     /locus_tag="VK429_03825"
     CDS             complement(1765..2829)
                     /locus_tag="VK429_03825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90968.1"
                     /translation="MSSSHSALQKYERALNRYFQIPAAERETGDREKILKTLGVENPQ
                     EFLGMHIPLWEAKLDELLDPTSTDMLPISISHSYVNWVRGAIRMMPAEARVKIFSSKF
                     KATGLKKAILTLLHEVTGKPHRDFEVTEVLLIEKVHKDTLFTVRTPDGKECDLYLSRF
                     GCMGEHIYSGLPNLVGLPGLPTVYHVTPQGEEVLLKPKEEGINIYHDDSVTLSRITRD
                     GVWWVAGVARQDALGDCIGTALRYGHYVATPKKEVVMIDNIELFHLEETDVRISEPIY
                     EFLPKKAYPDDRAKRVRLQDKMRQEYEAAYAGQRTVIRKEWPEIERYLIEMRRNIHAY
                     AGEVFEMVMTRVKAQVFSGK"
     gene            complement(2889..4886)
                     /locus_tag="VK429_03830"
     CDS             complement(2889..4886)
                     /locus_tag="VK429_03830"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HLN90969.1"
                     /translation="MTDLPLVLRDLSIVLAIATAVALLFGRLHLSVVAAFLVAGAILG
                     PTGAGLVAEAGMVNSLAEIGVALLLFTVGLEISLANLGKMRRRIVQGGGVQLSATILL
                     TMAVLSLAGFHLAEATFIGFVLSLSSTAIVLKVYADRMEFDSGHGKISIGILLFQDMA
                     VIPMMLLIPSFRQWETAQFSTVAFTLAKAGVGVAVILLASRFVIPLLLKEVIRLNSRE
                     ILATTVMCLILGTAWVARWWGLSLAMGAFLAGMVISESVYVHEIAAQIFPFRDVFNGV
                     FFISVGMLLDLPFLARHLPMILLFSIGVVLAKAICAGAAIRTLDYPWRVSVIGAIGLA
                     QVGEFSFLLISEGFRDGLVGAEVYQYLLAVAILTMVSTPFLMRVAPWAARYFVRNVVR
                     ATEPEDPGEEAPGAERVENHVIISGYGMNGKNLARVLRSTHVPYVVVDLNDALVREGR
                     EAGEAIFYGDVNNPEILDRVGVGRARMLVLAISDPMATRRAVAVARRANPRLVILVRT
                     RYVADVDDLIALGANAVIPEEFETSVEIFSRVLREYHVPDLVISQQEELIRSGTYRIL
                     RERVPSRDEGVLSEFEAFLRQKVIEVFYVSPGSPWAGHRLGDLPVGNGAGIVLLAVLR
                     QDRAIAQPSPEEKIEAGDKLVFFGGHGPLATALEELTKGSL"
     gene            complement(5163..>6040)
                     /locus_tag="VK429_03835"
     CDS             complement(5163..>6040)
                     /locus_tag="VK429_03835"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLN90970.1"
                     /translation="GAFGPDASRPVRDSDILCQALSGAPYIVGEPERVDGTPLPHQAP
                     TRLGNWHGAFIQGLWGAYGVLAALHFRAETGVGQALDLSGAESLMMFADYNITWMHTG
                     GKARERVGNFDPAVFPYTYIRCRDGYTFIAAYNDEAFDSLMHIIGRPELSRDPRFSTP
                     KNRVALENERALLSILEEWSGDRTADEILEAVEEYTSKRGGPGAAVVTGRVNRPLETL
                     SEGHWRERGCFLRARDPVYGDLLLAAPPWKMSGTPARWKSGCRPPGSDNRDVYLGILG
                     MTEEEYRRLAEAGTL"
BASE COUNT         1015 a         2046 c         2023 g          956 t
ORIGIN      
        1 acccggagtt ccgccacgag tggtggtact tcaccggaaa cctccgggcg cccggggagc
       61 ggcgcttcgg ataccagctc accttcttcc gtttcgcgct atcccccggc cctcccgacc
      121 ggcggtcgcg gtgggcgacg acccaggcgt acatggccca cttcgcggtc accgacgtgc
      181 aaggaaaccg gttccaccac ttcgagcgga ccgggcgcgg cgccctcggc cttgcggggg
      241 gaaccgcgcg cccgttccgg gtttggctcg acgactggtc cgcggagggg gcggaggcct
      301 ccaccttgcc gatccggctg cgggccgcgg aacagggggc ggcggtcgac ctcttcctcg
      361 acaccacgag gtcgatcgtg ccccaggggg atcggggatt cagccggaag ggcgccgccc
      421 cgggaaacgc ttcgcactac tattcgatga cccggctcgc gacccgcggg accgtgcggg
      481 tcgacggcgt ttcgttcccg gtggagggga attcctggct ggaccgcgaa tgggggacca
      541 gcgcgctcga gaaagggcag gcggggtggg actggttcgc cctgcagctt tcggacggaa
      601 gggacctgat gttctaccgg ctccgcaggg aggacggcgg gaccgatccg ttcagcgccg
      661 gcacgctggt cctcccggac ggttcctatc gacccctttc gcccgacgac gtgcggatcg
      721 aggacctcga atcctggagg agcccggaga gcggcgtgcg ctacccttcc cgctggcggc
      781 tccggcttcc gcacgaaggg ttggagctgg aggtcttccc ccgcatcgcg gaccaggaat
      841 tgcggaccgc cgtccggtat tgggaagggg cggtcggtat ccgtggaacc tcccgcgggg
      901 agcgggtcga gggggaaggg gacgtcgagc tgacggggta tggggaaacg gccgggcgct
      961 gaccggggct atcgccccgc cgcacccggt ttgttgttcg gcaccacgaa taagtgtatc
     1021 ttcgcgcgga gaggaggatg cgatgactgc gaattcgaaa ccggtgtcgg cgacccggct
     1081 ggtgatggcc caggagatga cgccccagga cgcgaacccc gcggggaacg tccacggggg
     1141 gaatatcatg cgactggccg actcggccgc cggcgtggtc gccatccggc actccggcag
     1201 gaactgcgtc accgccgccg tggaccactt cgaattccac gcccccgtct tcatcggcaa
     1261 cctcgtcacc tttcacgcct ccgtgaaccg agtcgggcgc acctcgatgg aggtcggagt
     1321 ccgggtcgag gcggaggaac cgcgcacggg gaagaagacc cacacgaatt cgtcctactt
     1381 cctgatggtg gcgctggacg acgaggggag accggtcgag gtaccgcggc tcatcctcga
     1441 gacggacgag gaccgccgca ggaacgagga ggccatgcag cgggcgatcg cccggcgaca
     1501 gtggaagaaa aagtagggcg ggtgaaagga tgacagggga tcggaggaaa cgccccggtt
     1561 cgcgtctgct gctggggatc gcgctcttcg cggggacact cctgtcgatg ttcggggggg
     1621 cgcttgtcgc ggaattcgcg ctggacctgc tgggcgtcgc ctcgccgccg gtccggctcg
     1681 gggcgaaggt gatcgccatg gcggccgcgc tgccggcggg cttctacctc gtcgaacgcg
     1741 ccttcctcgc gcggtcctcc cccgctactt cccggaaaac acctgggcct tgacgcgggt
     1801 catcaccatc tcgaacacct cgcccgcgta ggcgtggatg ttgcggcgca tctcgatcag
     1861 gtaccgctcg atctcgggcc actccttccg gatcaccgtc ctctgcccgg cataggccgc
     1921 ctcgtactcc tgccgcatct tgtcctggag ccgcacccgc ttcgcccggt cgtccggata
     1981 cgccttcttc gggaggaatt cgtagatcgg ctcggaaatg cggacgtcgg tctcctccag
     2041 gtggaacagt tcgatgttgt cgatcatcac cacttccttc ttcggggtgg cgacgtagtg
     2101 cccgtaccgc agtgctgttc cgatgcagtc cccgagagcg tcctgtcggg ctaccccggc
     2161 tacccaccac acgccgtcgc gggtgatccg ggagagggtc actgaatcgt cgtggtagat
     2221 gttgatcccc tcctccttcg gcttgaggag cacctcctcg ccctgcggcg tcacgtggta
     2281 gacggtcggg aggccgggca gccccaccag gttcggcagg ccgctgtaga tgtgttcgcc
     2341 catgcacccg aagcgggaga ggtagaggtc gcattccttc ccgtccggcg tccgcaccgt
     2401 gaagagggtg tccttgtgga ccttctcgat caggaggacc tcggtgacct cgaagtcgcg
     2461 gtgcggcttt cccgtgacct cgtggagcag cgtcaggatc gcctttttca gcccggtcgc
     2521 cttgaacttg gaggagaaga tcttcaccct ggcctcggcc ggcatcatcc ggatcgcgcc
     2581 gcgcacccag ttgacgtagg agtgggagat gctgatcggg agcatgtcgg tgctcgtcgg
     2641 gtcgaggagt tcgtcgagct tggcttccca gagcgggatg tgcatgccga gaaactcctg
     2701 cgggttctcg accccgaggg tcttgaggat tttctccctg tccccggtct cccgctcggc
     2761 ggcgggtatc tggaagtacc ggttcagggc acgctcgtac ttctgcaggg cggagtggga
     2821 agaagacatc attgccctcc cgaccgatgg agtgggaacg tcatgatctt atcaccagag
     2881 gccccttgtc agagcgatcc ctttgtcagt tcctcgagcg cagtcgccag gggaccatgc
     2941 cccccgaaga agacgagctt gtcccccgcc tcgatcttct cctccgggga cggttgcgcg
     3001 atcgcgcggt cctgccgaag gacggcgagg aggacgatcc ccgcgccgtt accgaccgga
     3061 agatctccca ggcggtgtcc cgcccacggc gagcccgggg aaacgtagaa aacctcgatc
     3121 accttctgcc gaaggaacgc ttcgaactcc gacagcaccc cctcgtccct cgatgggacg
     3181 cgctcccgca ggatccggta cgtcccgctg cggatcagct cttcctgctg cgagatgacg
     3241 aggtcgggaa cgtggtactc ccgcaggacc cgggagaaga tctccaccga cgtctcgaac
     3301 tcctcgggga tgaccgcgtt cgcccccagg gcgatcaggt cgtccacatc cgccacatac
     3361 cgcgtccgca cgaggatgac cagccgcggg ttggcccgcc gggccaccgc cacggcacgg
     3421 cgggtcgcca tcgggtcgga gatcgccagc accagcatcc gggcacggcc caccccgacg
     3481 cggtcgagga tctccgggtt gttcacgtcc ccgtagaaga tcgcctcccc ggcctcccta
     3541 ccctcccgca ccaacgcgtc gttcaggtcg acgacgacgt agggaacgtg cgtcgaacgc
     3601 agcacgcggg cgaggttctt cccgttcatc ccgtacccgg agatgatcac gtggttttcg
     3661 acccgctccg cgccgggagc ttcctctccc ggatcttccg gctccgtcgc gcgaacgacg
     3721 ttccggacga agtacctcgc cgcccacggg gccacccgca tcaggaacgg cgtcgacacc
     3781 atcgtgagga tggcgaccgc gaggaggtac tggtacactt ccgctcccac caggccgtcc
     3841 cggaatccct cggatatcag gagaaacgag aactccccga cctgcgccag cccgatcgcc
     3901 ccgatcacgg agacccgcca ggggtagtcc agggtccgga tcgccgcccc ggcgcagatc
     3961 gccttcgcca ggacgacccc gatggaaaag aggaggatca tggggaggtg acgcgcgaga
     4021 aacggaaggt cgagcagcat cccgacggag atgaaaaata ccccgttgaa gacatcccgg
     4081 aaggggaaga tctgggcggc gatctcgtgg acatacaccg actcggagat caccattccg
     4141 gcgagaaacg cccccatcgc cagggagagc ccccaccacc gcgcgaccca cgccgtcccg
     4201 aggatcaggc acatcaccgt cgtcgccagg atttcccggc tgttcagccg gatgacttcc
     4261 ttgaggagga gcgggatcac gaaacgcgac gccagcagga tcaccgcgac gcccacgccc
     4321 gccttggcca gtgtgaacgc cacggtggag aactgcgccg tctcccattg ccggaacgag
     4381 gggatgagca gcatcatcgg gatcacggcc atgtcctgga acagcaggat gccgatggag
     4441 atcttcccgt ggccgctgtc gaactccatc cggtcggcgt acaccttcag aacgatcgcg
     4501 gtgcttgaaa gggacaggac gaagccgatg aaggtcgctt ccgcgaggtg gaaccccgcg
     4561 agggaaagga cggccatggt gaggaggatc gtcgcggaga gctggacccc gccgccctgc
     4621 acgatgcggc ggcgcatctt ccccaggttc gcgagcgaga tctccagccc gacggtgaac
     4681 agcaggagcg cgacgccgat ctcggcgagg gagttcacca tccccgcctc ggccaccagc
     4741 cccgcgcctg tcgggccgag gatcgcgccc gcgaccagga acgccgccac gacggagagg
     4801 tggagccgcc cgaacagcag cgcaaccgcc gtggcgatcg caagaacgat ggacaggtcg
     4861 cgaaggacca ggggcaggtc ggtcaacggt tctcccggag gcggattgcc ttgtgcagcg
     4921 tcagtctacc agcccggcgg aagagagtga accgacccct cccggggcag gtgggagaaa
     4981 cattccgctg aagttccgtc gaagaaattc cgaagagaga atccacagga acggtaccgc
     5041 ctgcctcccc tccccgggga ggcaactgcc cgcacacccc tccaacggtt cgcgggcgac
     5101 gcgaacggtc ccccggggtt cccgcctgtg ccccggggga ctgctcttcc cggtccgctc
     5161 cctcagagcg tccccgcctc cgcgaggcgg cggtactcct cttccgtcat cccgaggatt
     5221 ccgaggtaga cgtcccggtt gtccgacccc gggggccggc accccgactt ccaccgggcc
     5281 ggggtcccgc tcatcttcca gggaggcgcg gcgagcagca gatcgccgta gacggggtcc
     5341 cgggcgcgca gaaagcaccc cctctcccgc cagtgcccct cggagagcgt ctcgagcggt
     5401 cggttcaccc gccccgtgac cacggcggcg ccggggccgc cccgcttcga ggtgtactcc
     5461 tcgaccgcct cgaggatctc gtccgccgtg cgatcgccgg accactcctc gaggatcgaa
     5521 aggagcgccc gctcgttctc gagggcgacg cggttcttcg gcgtggagaa ccgcgggtcg
     5581 cgggacagtt ccgggcggcc gatgatgtgc atcagggaat cgaacgcctc gtcgttgtag
     5641 gcggcgatga aggtgtagcc gtcccggcag cggatgtagg tgtacgggaa gacggcgggg
     5701 tcgaagttcc cgacccgctc gcgcgccttt ccgcccgtat gcatccaggt gatgttgtag
     5761 tccgcgaaca tcatcagcga ctcggccccc gagaggtcca aggcctggcc caccccggtc
     5821 tccgcgcgga aatgaagcgc cgcgagaacc ccgtaggctc cccagagccc ctggatgaat
     5881 gccccgtgcc agttcccgag gcgggtcggg gcctggtgcg gcagcggcgt gccgtccacc
     5941 cgttccggct ccccgacgat gtacggagcc ccggagagcg cctggcagag gatgtcgctg
     6001 tcccgcacgg gacgggaggc gtcgggaccg aacgcgccgt
//
LOCUS       DATGYW010000275         1523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_400139, whole genome shotgun sequence.
ACCESSION   DATGYW010000275 DATGYW010000000
VERSION     DATGYW010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400139"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /gene="fusA"
                     /locus_tag="VK429_03840"
     CDS             <1..272
                     /gene="fusA"
                     /locus_tag="VK429_03840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006583306.1"
                     /note="EF-G; promotes GTP-dependent translocation of the
                     ribosome during translation; many organisms have multiple
                     copies of this gene; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HLN90971.1"
                     /translation="PEENVGDIIGDLNGRRGRVLGVDALGKSQIVRCQVPLAEVLRYS
                     SDLRSITSGRGQFTMKVSHYEEIPAAIAEKVISESKKEMGEEEEE"
     gene            269..745
                     /locus_tag="VK429_03845"
     CDS             269..745
                     /locus_tag="VK429_03845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90972.1"
                     /translation="MNGPGGSPAGPDLTEERPIGEEERSSIAAQVARLSVPGKVELAV
                     KGNREVRRILSRDASSMVARAVIGSPKLTEDDIVSYAASSLTHEEVLRFIADSRQWTA
                     NRQVVNALVLNPRTPPPAAIRFLKSYQTSELRVLSQNRSLSAAVRQEARRLLAQRH"
     gene            762..1340
                     /locus_tag="VK429_03850"
                     /pseudo
     CDS             762..1340
                     /locus_tag="VK429_03850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015347803.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylation factor-like protein"
BASE COUNT          291 a          476 c          518 g          238 t
ORIGIN      
        1 tcccggagga gaacgtgggg gacatcatcg gggatctcaa cgggcgccgc ggccgggtcc
       61 tgggcgtgga tgcccttggg aagagccaga tcgtccggtg ccaggtgccg ttggcggagg
      121 ttctccgcta ttcgtccgac cttcgttcga tcacctccgg ccgcgggcag tttacaatga
      181 aggtgtccca ctacgaggag atccccgcag ccatcgcgga gaaggtgatc tcggagtcga
      241 agaaggagat gggggaagag gaggaagagt gaacggtccc gggggctcgc cggccggacc
      301 ggacctgacg gaggagcggc cgatcggcga ggaggagcgg agctcgatcg ccgcgcaggt
      361 cgcccggctc tccgtgcccg ggaaggtgga actcgcggtc aagggaaacc gggaagtccg
      421 acggatcctg tcgcgggacg cgagcagcat ggtggcccgt gcggtgatcg ggagcccgaa
      481 actgacggag gacgatatcg tctcctacgc ggcttcctcc ctgacccacg aggaggtgct
      541 ccggttcatc gccgacagcc ggcaatggac cgcgaaccgg caagtggtca acgcgctggt
      601 cctgaacccg aggacaccgc cgccggccgc gatccggttc ctgaagtcgt accagaccag
      661 cgagttgagg gtcctgtcgc agaaccgcag cctttcggcc gcggtgcggc aggaggcgag
      721 acggctgctg gcccagcgtc actaacgatc cgggagaacc gatggccctc ttcaactatg
      781 cgacccgcga gctcagcgcg aagatcgtct attacggccc gggcctctcc gggaaaacga
      841 ccaacatcga catggtccac aagatgctgc gcccggagca gaaggggcgg ctgatatccc
      901 ttcccaccga gaccgaccgg accctgtttt tcgacttcct cccgatcgag cttgggcaga
      961 tcaaggggtt caaggtccgc ttccatctct acacggtgcc cgggcaggtg ttctacaacg
     1021 ccacccggcg gctggtgctc cagggcgtgg acggcgtcgt gttcgtcgcg gactcccaga
     1081 gggagatgat caacggcgac atggagagcc tgaagaacct gatggacaac ctctcctcct
     1141 acgggaagaa gctcgaggat ctcccgttcg tccttcagta caacaagcgg gacctccgga
     1201 acgccgcccc ggtggcggaa ctggacgccg cgctgaattt cctgcacgtt cccaccttcg
     1261 aggcggtcgc acccaccggc aagggggtga ccgagacgct ggttgggatc tccaggatgg
     1321 tcttctccca cctccggaaa acccttctga tgccgggaga gatggcggcg cacgacgata
     1381 taggggatct tgccgacgcg cggatccgga agaccttcac cacgccggcg gccgagcccc
     1441 tcgaggaaat ttccgacgtc gaggagattc aggaagaggt agaggccatc cccgcggcgg
     1501 cgccccgggc tgcggtcgag atc
//
LOCUS       DATGYW010000276         2488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_400215, whole genome shotgun sequence.
ACCESSION   DATGYW010000276 DATGYW010000000
VERSION     DATGYW010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400215"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1482)
                     /locus_tag="VK429_03855"
     CDS             complement(<1..1482)
                     /locus_tag="VK429_03855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006309686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HLN90973.1"
                     /translation="MAGKNGKGGLREARERWERDILAPAISKSRERRRFESTSGEEVH
                     RLYTPEHLASFDYLRDAGFPGAFPFTRGVQPTMYRGRLWTMRQYAGFGDAKESNRRYR
                     YLLDNGQTGLSVAFDLPTQMGYDSDAPMSFGEVGKVGVAIDSLEDMEVLFDRIPLGKV
                     STSMTINSTAAILLAMYIAVGEKQGVAAAALNGTIQNDILKEYIARGTYIFPPAPSMR
                     IITDIFAFCKHVVPRWNTISISGYHIREAGSTAAQEVAFTLANGIAYVQAAIDAGMSV
                     DSFASRLAFFFNAHNNFLEEVAKFRAARRLWAGIMRERFGAKDPRSWMLRFHTQTAGS
                     SLTAQQPDNNIVRVTIQALSAVLGGTQSLHTNSRDEALSLPTEASVRIALRTQQLIAH
                     ESGVADTIDPLGGSWCVEALTSGIERQAREYIARIDRMGGVIPAVDSGYIQKEIQDAA
                     YRYQLQVERKDQVVVGVNDFVVQEGKPDNLLKVDPRVEKEQRKR"
     gene            complement(1492..1995)
                     /locus_tag="VK429_03860"
     CDS             complement(1492..1995)
                     /locus_tag="VK429_03860"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HLN90974.1"
                     /translation="MSYVATIGEREVKVTVEDLGGAGYKVAIDGVEHVVDAHQVAGQL
                     WSVLYQGASFVVDVTQLPTEEYEVLIQGDCHKFTLMNEQRRAMIRAGGKGSAGKAMLT
                     SPMPGKVVKLLVNEGQEVEAGQGVIVVEAMKMENELKSAVAGKVKEIFVKEGEVVESG
                     AKLLLVE"
     gene            complement(2004..>2488)
                     /locus_tag="VK429_03865"
     CDS             complement(2004..>2488)
                     /locus_tag="VK429_03865"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF014804.4"
                     /note="catalyzes the ATP-dependent carboxylation of a
                     covalently attached biotin and the transfer of the
                     carboxyl group to pyruvate forming oxaloacetate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HLN90975.1"
                     /translation="PERNFMPCPGVVTSLRVPGGPGVRDDSGMYEGFEIPIYYDPIIS
                     KLVVWGKDRTEAIARMKRALAEYVVTGVKTTIPFHIRVMNNRHFIEGNFDTNFIDKVF
                     FKEEEARQLANEEVALVTAAIQVFTGERKRAVAQQPGEAAGPVSMWKSSTRPGIRMIG
                     "
BASE COUNT          376 a          876 c          795 g          441 t
ORIGIN      
        1 gcgcttgcgt tgttcctttt cgacccgggg gtcgaccttg aggaggttgt cgggcttacc
       61 ctcctgcacg acgaagtcgt tcacgcccac gacgacctga tccttccgct cgacctggag
      121 ctggtaccgg tacgccgcgt cctggatctc tttctggatg tagccggagt cgacggccgg
      181 gatgacgccg cccatccggt cgatccgggc gatgtactcc cgcgcctgcc gctcgatgcc
      241 ggaggtgagg gcctcgacgc accaggagcc gccgagcgga tcgatcgtat ccgcgacccc
      301 gctttcatgc gcgatcagct gctgcgtcct gagggcgatg cgcaccgacg cctccgtggg
      361 aagggagagc gcctcgtcgc gcgagttcgt gtgcagcgac tgggtgcccc ccaggacggc
      421 cgaaagcgcc tggatcgtca cgcggacgat gttgttgtcg ggctgctgcg cggtaaggga
      481 cgacccggcg gtctgcgtgt ggaaccggag catccaggag cggggatcct tcgccccgaa
      541 ccgctcccgc atgatcccgg cccacagccg ccgcgcggcc cggaacttgg cgacctcctc
      601 gaggaaattg ttgtgggcgt tgaaaaagaa ggccaggcgc gacgcgaagg aatcgaccga
      661 catcccggcg tcgatcgcgg cctgcacgta ggcgatcccg ttcgcgaggg tgaaggcgac
      721 ctcctgcgcc gccgtcgacc ccgcctcgcg gatgtggtag ccggagatgc tgatcgtgtt
      781 ccagcggggg acgacgtgct tgcagaaggc gaagatgtcg gtgatgatcc gcatcgaggg
      841 ggcgggcggg aagatgtagg tcccccgggc gatgtactcc ttcaggatgt cgttctggat
      901 ggtgccgttc agcgccgcgg cggccacccc ctgcttctcg cccacggcga tgtacatcgc
      961 cagcaggatg gcggcggtcg agttgatcgt catcgaggtg gagaccttcc cgagcgggat
     1021 ccggtcgaac aggacctcca tgtcctcgag ggagtcgatc gccacgccga ccttcccgac
     1081 ctccccgaac gacatggggg cgtcggagtc gtatcccatc tgggtcggaa gatcgaaggc
     1141 cacggacaga cccgtctggc cgttgtcgag caggtaccgg taccggcggt tcgactcctt
     1201 cgcgtccccg aagcccgcgt actgccgcat cgtccagagg cggccgcggt acatcgtcgg
     1261 ctggacgccg cgcgtgaagg ggaacgcgcc cgggaagccc gcgtcccgga gataatcgaa
     1321 cgacgcgagg tgctccggcg tgtagagacg gtggacctct tccccggagg tgctctcgaa
     1381 ccggcggcgc tcccgggact tcgatatcgc cggcgcgagg atgtcgcgct cccagcgctc
     1441 gcgcgcctcc cgaagcccgc ccttcccgtt cttccccgcc atccggccct cctactccac
     1501 gaggagcagc ttcgcccccg actcgacgac ctcgccttcc ttgacgaaga tctccttcac
     1561 cttccccgcg acggcggact tcagctcgtt ctccatcttc atcgcctcga cgacgatcac
     1621 tccctggccg gcctcgacct cctgcccttc gttgaccagg agcttgacca ccttcccggg
     1681 catcggggag gtgagcatcg ccttcccggc ggagcccttg ccgcccgccc ggatcatcgc
     1741 ccggcgctgc tcgttcatca gggtgaactt gtggcagtcg ccctggatga gcacctcgta
     1801 ctcctccgtc ggcagctggg tcacgtccac cacgaacgac gcgccctggt acaggaccga
     1861 ccagagctgg ccggccacct ggtgggcgtc cacgacgtgc tccaccccgt cgatcgccac
     1921 cttgtagccc gccccgccga ggtcctcgac ggtgaccttc acttcccgct cgccgatcgt
     1981 cgccacgtag ctcatcgtcg cacctacccg atcatccgga tgcccgggcg ggtggaggat
     2041 ttccacatcg agacgggacc ggccgcctcc ccgggttgct gggccaccgc gcgcttccgc
     2101 tccccggtga acacctggat cgccgccgtg accagggcga cctcctcgtt ggcgagctgg
     2161 cgcgcctctt cctccttgaa gaacaccttg tcgatgaagt tcgtgtcgaa attcccctcg
     2221 atgaagtgcc ggttgttcat cacgcggatg tggaagggga tcgtggtttt caccccggtg
     2281 accacgtact cggcgagggc ccgcttcatc cgggcgatcg cctccgtccg gtccttcccc
     2341 cacaccacca gcttggagat gatcgggtcg tagtagatgg ggatctcgaa cccctcgtac
     2401 atgcccgagt cgtcccgcac gccggggcct cccggaacgc gcagcgacgt gaccacgccg
     2461 ggacacggca tgaagttgcg ctccgggt
//
LOCUS       DATGYW010000277         1504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_175033, whole genome shotgun sequence.
ACCESSION   DATGYW010000277 DATGYW010000000
VERSION     DATGYW010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175033"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..196)
                     /locus_tag="VK429_03870"
     CDS             complement(<1..196)
                     /locus_tag="VK429_03870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014811986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN90976.1"
                     /translation="MRKGVLFLAVILSTFWLAGSGVAGDTIKVGFVDTYTGPATTFTN
                     DVLDGFKMAAEKINAKGGVLG"
     gene            319..765
                     /locus_tag="VK429_03875"
     CDS             319..765
                     /locus_tag="VK429_03875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLN90977.1"
                     /translation="MKDPIVIRNAVPTDLDAIIAIDDVGHKEEKPAYWRGIFAHYGSG
                     EKKDRIFLAAEAGGEIVGFIAGEVRAWEFGSAPCGWVFALAVSPGMRGAGIAKRMFDE
                     ICRRLKGAGVTTVRTMVDRNNKVTLSFFRSQGLRSGRYIELEREID"
     gene            762..1196
                     /locus_tag="VK429_03880"
     CDS             762..1196
                     /locus_tag="VK429_03880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012645310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HLN90978.1"
                     /translation="MKLNKGSLFALFAVLELAGNGDRQLSTTDIAEKYGISTHHLAKV
                     MRNLVHSGLVQAVRGVGGGYRFAGNVSRTTLLDVIELFEKLESELDMPKHGNPAGEPI
                     VAELRSITAEIDDLTKAILDTITLETALKGTRLRREAATAGK"
BASE COUNT          268 a          481 c          495 g          260 t
ORIGIN      
        1 tcccgagcac gccgcccttc gcgttgatct tctccgcggc catcttgaat ccgtcgagga
       61 cgtcgttggt gaaggtcgtc gccggaccgg tgtacgtatc gacgaacccg accttgatcg
      121 tgtcgccggc aacgcccgac cccgccagcc agaacgtcga caggatcacc gccagaaaca
      181 gaacgccttt tctcatcgcc tgcccccctt tgtggattgg cacctcgtaa tacccgaagg
      241 aggctcgacc cgatggtacc ccgggaagga agccccttgc tttcctttcc gattatggta
      301 ttaaggtacc atatggcaat gaaagatcca atcgtcatcc ggaacgccgt gcccaccgac
      361 ctcgatgcga tcatcgcgat cgacgacgtc ggccacaagg aggagaaacc ggcctactgg
      421 cgcgggatct tcgcgcatta cgggagcggc gagaagaagg accggatctt cctggccgcg
      481 gaagccgggg gcgaaatcgt cgggttcatc gccggggaag tgcgcgcctg ggagttcggt
      541 tcggccccgt gcggctgggt cttcgcgctg gcagtctccc cggggatgcg cggggcgggg
      601 atcgcgaagc ggatgttcga cgagatctgc cggcgcctga aaggggccgg ggtcaccacg
      661 gtgcggacga tggtggaccg gaacaacaag gtgacgttgt cgttcttccg gagccagggg
      721 ctgcgctcgg gccggtacat cgaactggaa cgggagatcg attgaagctg aacaagggat
      781 ccctcttcgc cctcttcgcg gtgctcgaac tggcgggcaa cggcgaccgg cagctctcca
      841 ccaccgacat cgccgagaag tacgggatct ccacgcacca cctcgccaag gtgatgcgca
      901 acctggtgca ctccgggctg gtccaggcgg tgcgcggcgt cggcggcggg taccggttcg
      961 cggggaacgt cagccggacg acgttgctgg acgtgatcga gctgttcgaa aaactcgaat
     1021 ccgagctcga catgccgaag cacgggaacc cggcgggcga gccgatcgtc gcggagcttc
     1081 gcagcatcac cgcggagatc gacgacctca cgaaggcgat cctcgacacg atcacgctgg
     1141 aaacggcgtt gaaaggcacc cgcctgcgca gggaagccgc cacggccgga aaataatcat
     1201 cagggtccgg ctgcgccgcc tcggagggtg gggctccgtt cgtggctcgc cgtgcgatga
     1261 acctgcacgg ctgcgcaccg gcctcactgt gccccccgtt cttcctacgg cgggggtacc
     1321 ccagggaggg caattcatac gggagtgggg cgcccccctc ctgcggcgac tccgccggac
     1381 cctcccgttg cgtgcccctc aagtcgtacg ctgcagggta ccccggggag cgcatttcgt
     1441 acgggagcgg ggtgcgcctt ccgggctatc ttcccgatac gttaccgtat ttgttgtttt
     1501 tcgc
//
LOCUS       DATGYW010000278         3423 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_76520, whole genome shotgun sequence.
ACCESSION   DATGYW010000278 DATGYW010000000
VERSION     DATGYW010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3423
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76520"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..275
                     /locus_tag="VK429_03885"
     CDS             <1..275
                     /locus_tag="VK429_03885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018934524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HLN90979.1"
                     /translation="DARVRDSLDRSGYLKYFVHSTGHGVGLDVHEMPSLSPRSRERLQ
                     EGMVITVEPGVYLPGLGGIRLEDTVKVTGSGCERITFLPKTHTPLV"
     gene            292..849
                     /gene="efp"
                     /locus_tag="VK429_03890"
     CDS             292..849
                     /gene="efp"
                     /locus_tag="VK429_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014811474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HLN90980.1"
                     /translation="MYTTSDFRNGLKIEFDGGPFIIVYFQHVKPGKGGAFVRTKLKNL
                     KSGAVIEHTFRSGDKVEKPDLEEREMQFMYKMEGQFHFMDTRTYEQIYLDEGHVEGAG
                     NYLIENLPVKILFYKGEPIGIDIPFFIDLKIVETEPGVRGDTVSGSTKPAKLESGAVV
                     SVPLFLNEGDVIKVDTRTGSYIERM"
     gene            854..1309
                     /gene="accB"
                     /locus_tag="VK429_03895"
     CDS             854..1309
                     /gene="accB"
                     /locus_tag="VK429_03895"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014399056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HLN90981.1"
                     /translation="MPMNLKEIREILELLKGSDVSEFELGRGDTVLKLRRGPANVPVV
                     LPSPSPVPAAPARPPEEPPPAPVPPKPAYKEILSPIVGTFYRSPAPDAAPFVEVGTRV
                     VKGQVLCIVEAMKIMNQIESDTTGTIAAIIVENAQPVAYGQALFHVTPE"
     gene            1319..2656
                     /gene="accC"
                     /locus_tag="VK429_03900"
     CDS             1319..2656
                     /gene="accC"
                     /locus_tag="VK429_03900"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020676408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HLN90982.1"
                     /translation="MIHKVLIANRGEVAVRIIRTCREMGIKTVAVYSTADRDAMHVRM
                     ADQAVCIGPPPGADSYLNVPAILSAIEITDADAVHPGYGFLAENAAFAEICGNYGVRF
                     IGPSSEAIRLMGDKIEARRAVQKVKVPVVPGSDGAVTEEEEGLRVAKEIGFPVIVKAA
                     AGGGGRGMKIVHSPASFINAFLTAQSEALSAFGVPDVYIEKYFDNARYVEVQVMGDRH
                     GNVIHLGDRDCSIQRRHQKLIEESPAPALPARVRNRMWKAAVDAAVGVKYDSVGTVEF
                     LYVPDGEFHFLEMNTRIQVEHTVTEMVTGIDIVREQIRIADGKKLRYAQKDVPMRGHS
                     IEVRINAEDSETFLPFPGPVHTCIFPGGFGVRVDTAIYPGYVVPSTYDSLLGKLIVHG
                     DDRNEAIMRMRRALDEVRIEGVRTTVAFHKKMMVNSDFVEARLSTNFLEKNRP"
     gene            2686..>3423
                     /locus_tag="VK429_03905"
     CDS             2686..>3423
                     /locus_tag="VK429_03905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90983.1"
                     /translation="MFTSREQEDRVSLSRKVQGSPNDPQARQKLGIFLMQQGEVVEGL
                     DQLARAAVLYEKDGFSSKAIAVLRQMQKHDPRNNDFQKWLIRLLAHEGLSSDAQAELR
                     KVASDPTRFTSDDQRLDFFRQTAEYLKKNPLPRLYICDILRSQKKLHEAVKELEKAVP
                     QTTSSGMYAEFSERLRSIVNLAGDDLAVLEPCGFMWLAVGMPEEGFPILDRIAEAESV
                     NGDPGRESNVREVLDAIRGGWDVASAVV"
BASE COUNT          661 a         1037 c         1149 g          576 t
ORIGIN      
        1 tggatgcccg tgtgcgggat tcgctggacc ggtcgggata tttgaagtat tttgttcatt
       61 cgaccggaca tggcgtgggg ctcgacgtgc atgagatgcc ttcgctttcc ccccggtcgc
      121 gcgagcggct ccaggagggg atggtgatta cggtggaacc cggcgtctat ctgcccgggc
      181 tcggggggat ccggctggag gacacggtga aggtcaccgg gtcggggtgt gaacggatca
      241 cgtttctgcc caaaacgcac acaccactgg tttgaggagg cgcgcgcagg gatgtacacc
      301 acgtcggatt tccgcaacgg gctgaagatc gagttcgacg gggggccgtt catcatcgtc
      361 tacttccagc atgtgaagcc cggcaagggg ggtgccttcg tccgcacgaa gctcaagaac
      421 ctcaagtccg gcgcggtgat cgagcacacc ttccgcagcg gcgacaaggt cgagaaaccg
      481 gaccttgaag agcgcgagat gcagttcatg tacaagatgg agggacagtt ccatttcatg
      541 gacacccgga catacgagca gatctacctc gacgagggac acgtggaggg ggccgggaac
      601 tacctgatcg agaacctccc cgtgaagatc ctcttctaca agggagagcc gatcgggatc
      661 gacatcccgt tcttcatcga tctgaagatc gttgaaaccg agcccggcgt ccgcggcgac
      721 acggtgagcg ggtcgaccaa gccagcgaaa ctggagtccg gagcggtggt gtcggttccc
      781 ctcttcctga acgaggggga cgtgatcaag gtggacacgc gtaccggaag ctacatcgag
      841 cggatgtgag gggatgccca tgaacctgaa ggagatccgc gagatcttgg aactgctgaa
      901 gggctccgac gtgagcgaat tcgagcttgg acgtggggac acggtgctca agctgcgcag
      961 ggggcccgcg aacgttccgg tcgtcctgcc gtcgccgtcg cccgtcccgg cggcgccggc
     1021 ccggccgccg gaggagccgc cgccggcccc ggttcccccg aaaccggcct acaaggaaat
     1081 cctctccccg atcgtcggga ccttctaccg ttccccggct cccgatgccg ctcccttcgt
     1141 cgaagtgggg acccgcgtgg tcaagggaca ggtgctgtgc atcgtcgagg cgatgaagat
     1201 catgaaccag atcgagtcgg acaccaccgg cacgatcgcc gcgatcatcg tggaaaacgc
     1261 gcagccggtt gcatacgggc aggcgctctt ccacgtcacg cccgagtaag gaaacccgat
     1321 gatccacaag gtgctgatcg cgaaccgggg cgaggtcgcc gtccggatca tccggacctg
     1381 ccgggagatg gggatcaaga cggtcgccgt ctattcgacc gcggacaggg acgcgatgca
     1441 cgtccggatg gcggaccagg ccgtctgcat cgggccgcca cccggcgccg acagttatct
     1501 gaacgtcccg gcgatcctct ccgcgatcga gatcacggac gcggacgccg tgcacccggg
     1561 ctacggcttc ctcgccgaga acgccgcctt cgccgagatc tgcggcaatt acggcgtccg
     1621 gttcatcggg ccctcgtccg aggcgatccg actgatgggg gacaagatcg aggcgcggcg
     1681 cgcggtgcag aaggtgaagg tgccggtcgt gccggggagc gacggggcgg tcaccgagga
     1741 ggaggagggg cttcgggtcg ccaaggagat cggcttccct gtgatcgtca aggcggcggc
     1801 cgggggaggc ggccgtggga tgaagatcgt ccacagcccg gcttccttca tcaacgcgtt
     1861 cctcaccgcc cagtcggaag cgctgtcggc cttcggggtt cccgacgtct acatcgagaa
     1921 atatttcgac aatgcgcgct acgtcgaggt ccaggtgatg ggggaccgcc acgggaacgt
     1981 gatccatctc ggggatcgtg actgctccat ccagcgccgc caccagaagt tgatcgagga
     2041 atcgccggct cccgcacttc cggcgcgcgt ccggaaccgg atgtggaagg cggcggtcga
     2101 cgcggccgtc ggcgtgaagt acgatagcgt ggggaccgtc gagttcctct acgtacccga
     2161 cggtgaattc cacttcctcg aaatgaacac gcggatccag gtcgagcaca cggtgacgga
     2221 gatggtgacc ggcatcgaca tcgtgcgcga gcagatccgg atcgcggacg gaaagaagtt
     2281 gcgctacgcc cagaaggacg ttccgatgcg cggccactcg atcgaggtcc gcatcaacgc
     2341 ggaggactcg gagaccttcc ttccgtttcc cggtccggtt catacctgca ttttcccggg
     2401 agggttcggt gtccgcgtcg acacggcgat ctacccaggc tacgtcgtcc cgtccaccta
     2461 cgactctctc ctcgggaaac tgatcgtgca cggggacgac cggaatgagg cgatcatgcg
     2521 aatgcgaagg gcgctcgacg aggtccggat tgaaggggtg cgcacgacgg tggcattcca
     2581 caagaagatg atggtcaact ccgacttcgt cgaggcgaga ctctcgacga acttcctcga
     2641 aaaaaaccgg ccctgaagat gggattcctc gattccttca ggaggatgtt cacttcgcgg
     2701 gagcaggagg accgggtttc actctcccgg aaggtccagg gctcaccgaa cgacccgcag
     2761 gcccgccaga aactcggcat cttcctcatg caacaggggg aggtcgtaga ggggttggac
     2821 cagctcgccc gcgccgccgt cctttacgag aaggacgggt tttccagcaa ggcgatcgcg
     2881 gttctgcgcc agatgcagaa gcacgacccc aggaacaacg acttccagaa gtggctgatc
     2941 cggcttcttg cgcatgaagg gctctcctcg gacgcccagg cggaactccg gaaggtggca
     3001 tcggatccga cgcggttcac ctccgacgac cagcggctcg actttttccg ccagacggcg
     3061 gagtacctca agaagaaccc cctgccgcgg ctctacattt gcgatatcct ccggagccag
     3121 aagaaactgc acgaggcggt gaaagaactg gaaaaagcgg tcccgcagac gacgtcgagc
     3181 gggatgtacg ccgagttctc cgagcgcctg cgctccatcg tgaacctggc aggggacgac
     3241 ctcgccgtcc tcgagccgtg cggttttatg tggcttgcgg tcgggatgcc ggaggagggg
     3301 ttcccgatcc tcgaccggat cgccgaagcc gagtccgtca acggcgaccc cgggcgggag
     3361 tcgaacgtgc gggaggtgct cgacgccatc cggggcggat gggatgtcgc gtccgccgtg
     3421 gtg
//
LOCUS       DATGYW010000279         1981 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_400447, whole genome shotgun sequence.
ACCESSION   DATGYW010000279 DATGYW010000000
VERSION     DATGYW010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400447"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..592
                     /locus_tag="VK429_03910"
     CDS             <1..592
                     /locus_tag="VK429_03910"
                     /inference="COORDINATES: protein motif:HMM:NF037277.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90984.1"
                     /translation="TPLALAAILAAGIALFPPFTRHAIEPSRWGPLCALPAALILAWG
                     AMPLFIRRLSAERVVYLSFLLLALFLTSLNRPAAEYLGKYKSVKKLSSVLSASLREGD
                     VVAQYQMYRQGLPFYTKRRCVLVNEVGELEFGADRAADRKTFFLDDAAFLALWNSPAR
                     VFCVGRSDNLQEFLGKFPGHRLLYRSDEGILIVNRL"
     gene            634..1803
                     /locus_tag="VK429_03915"
     CDS             634..1803
                     /locus_tag="VK429_03915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006421766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLN90985.1"
                     /translation="MRDDFLPLSRPALGEEEVAAVAESLRSGWITSGPKVAELEGIFR
                     EVTGAPHAVAVTSATAGLHIVLSALGIGPGDEVATPSMTFASTVNQIVLRGAAPVFAD
                     VDYGTLQVRPDALAARITSRTKAVIPVHFAGAPADLDPIRAAADRAGIPVIEDAAHAV
                     GTVYKGVPAGGPPRPGTPGNIAIFSFHPIKNITTAEGGMVTCYDDAFAARLRLLRFHG
                     IERDAWRRYGKGGTPHYDIREPGYKYNLTDLHAAVGVVQMRKVAAMNARRADLAGRYL
                     ARLSGVPGIDLPEAVPYEHAHSWHLFIVKITGMDRDAVIGALAERNVGVGLHFPPCHL
                     LSYVRERFGTREGGLPDTERAGKGIVSLPLFPGMSDADVDYVCEAIREILSGGRP"
     gene            1800..>1981
                     /locus_tag="VK429_03920"
     CDS             1800..>1981
                     /locus_tag="VK429_03920"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLN90986.1"
                     /translation="MISVVVPVYNEEKNLLLLMDRLETALRKTGQPYEIIYVDDGSRD
                     NSLDVMRGFIGRTGVRV"
BASE COUNT          291 a          706 c          655 g          329 t
ORIGIN      
        1 gactccgctc gctctggcgg cgatcctcgc cgcggggatc gcgctgttcc cgccgttcac
       61 ccggcacgcg atcgagccgt cccggtgggg cccgctgtgc gccctcccgg cggcgctgat
      121 cctggcgtgg ggcgcgatgc cgctcttcat ccgccggctg tcggcggagc gagtcgtgta
      181 cctgtcgttc ctgctcctcg ccctcttcct cacctccctc aaccgcccgg cggcggaata
      241 tctgggaaag tacaagtccg tgaaaaagct ctcctccgtc ctctccgcct ccctgcgcga
      301 gggagacgtc gtggcgcagt accagatgta tcgccagggg cttcccttct acacgaagcg
      361 gcgctgcgtc ctcgtgaacg aggtgggaga gctcgagttc ggggcggaca gggcggcgga
      421 ccggaaaacg ttttttctcg acgatgcggc gttcctcgcc ctgtggaatt cgccggcccg
      481 cgtcttctgc gtgggccgca gcgacaatct tcaggagttt ctggggaagt tccccggcca
      541 ccggttgctc taccggtccg atgagggtat cctcatcgtg aaccgtctct gacccacccc
      601 accacgccgc gaggagcgga cgcgcccttg aagatccgcg acgatttcct gccgttgtcc
      661 cggcccgccc tgggcgagga ggaagtggcg gcggtcgcgg agtcgctgcg ctccggctgg
      721 atcacgagcg gaccgaaggt cgcggagctg gaaggaatct tccgcgaggt cacgggggcg
      781 ccgcacgccg tcgccgtcac ctccgccacc gccgggctcc acatcgtcct ctcggccctg
      841 gggatcggcc cgggggacga ggtggccacc ccctcgatga cgttcgcctc caccgtcaac
      901 cagatcgtcc tgcgcggggc ggcgcccgtc ttcgccgacg tcgactacgg gacgctccag
      961 gtgcgccccg acgcgctcgc tgcaaggatc acatcccgca cgaaggcggt gatccccgtc
     1021 catttcgccg gcgcgcccgc cgacctcgac ccgatccgcg cggcggccga ccgcgccggg
     1081 atccccgtga tcgaggatgc cgcgcacgcc gtgggcaccg tgtacaaggg cgtccccgcc
     1141 ggcggccccc cgcgtcctgg cacgccggga aatatcgcga tcttctcctt ccacccgatc
     1201 aagaacatca cgacggccga gggggggatg gtcacctgtt acgacgacgc cttcgccgcc
     1261 cgtcttcggc tgctccgatt ccacgggatc gagcgggacg catggaggcg gtacggaaag
     1321 gggggcaccc cgcactacga catccgggag ccggggtaca agtacaacct gaccgatctc
     1381 cacgccgcgg tcggggtggt ccagatgcgg aaggtcgcgg cgatgaacgc ccgccgggcc
     1441 gacctcgcgg gacggtacct cgcacgcctc tccggtgtcc cggggatcga tctcccggag
     1501 gcggtcccgt acgagcacgc ccactcgtgg caccttttca tcgtcaagat caccgggatg
     1561 gaccgggacg ccgtcatcgg cgccctcgcg gagcgaaacg tcggcgtggg gcttcacttc
     1621 cccccgtgcc acctcctctc gtacgtccgg gaacggttcg ggacgcggga ggggggtctt
     1681 cccgacaccg aacgggcggg gaaggggatc gtctccctcc ccctgttccc ggggatgtcc
     1741 gatgccgacg tcgattacgt ctgcgaggcg atccgggaga tcctttcggg agggcgccca
     1801 tgatctccgt cgtcgtcccc gtctacaacg aggagaagaa cctccttctc ctgatggacc
     1861 ggctcgagac cgcgttgcgg aagacgggac agccgtacga gatcatctac gtcgacgacg
     1921 gcagccggga caactccctc gatgtgatga gagggttcat cggtcgcacc ggcgtccggg
     1981 t
//
LOCUS       DATGYW010000280         1637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_454597, whole genome shotgun sequence.
ACCESSION   DATGYW010000280 DATGYW010000000
VERSION     DATGYW010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1637
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454597"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..545)
                     /locus_tag="VK429_03925"
     CDS             complement(<1..545)
                     /locus_tag="VK429_03925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011563608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HLN90987.1"
                     /translation="MERRTIVVTRRLPGVPWDDLAARFRAGDPPTEGTMPREEFLARA
                     RGATGILCTLADRVDAELMDAAGPSLAVVSNFAVGVNNVDVAGATRRGIRICNTPDVL
                     TDATADLGFALLLSAARRVSDADRFVRAGRWTGWDPWGFLGVPVAGKTLGIVGMGKIG
                     AGVARRSRGFSMKVLYHNRRR"
     gene            685..>1637
                     /gene="gap"
                     /locus_tag="VK429_03930"
     CDS             685..>1637
                     /gene="gap"
                     /locus_tag="VK429_03930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011343228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HLN90988.1"
                     /translation="MAVKVGINGFGRIGRNFFRAAYKDPSLQIVAVNDITDAKTLAHL
                     LKYDSVHGRFEASVEVKENAIVVNGKEIQVLACKDAADLPWGKLGVEIVIESTGRYTD
                     RDGAGKHIAAGAKRVIISAPAKGEDATFVMGVNEKTFDPAKHFILSNASCTTNCLAPV
                     AKVLLDTFGIERGLMTTIHAYTNDQKILDLPHKDLRRARAAGVSMIPTTTGAAKAVSL
                     VIPELKGKLDGMAIRVPTPNVSVVDLTAELSKNATAEEVNAAMKKASEGPMKGILQYV
                     DEPLVSIDFNHDPASSCFDALSTKVLGGKMVKVLSWYDNEWG"
BASE COUNT          294 a          577 c          527 g          239 t
ORIGIN      
        1 atccggcggc ggttgtggta gaggaccttc atggaaaaac cgcgggaccg gcgggccacc
       61 cctgcgccga tcttccccat cccgacgatc cccagcgtct tcccggcgac ggggaccccg
      121 aggaaccccc atgggtccca cccggtccag cgccccgccc gaacgaaccg gtcggcgtcc
      181 gatactcttc tcgcggcgga aaggagcagg gcgaacccga ggtcggccgt cgcgtcggtc
      241 aggacgtccg gcgtattgca gatccggatc ccgcgccggg tcgccccggc cacgtcgacg
      301 ttgttcacgc cgaccgcgaa gttcgacacg acggcaaggg agggcccggc ggcgtccatc
      361 agctccgcgt ccacccggtc cgcgagcgtg cagaggatcc ccgtcgcccc ccgggcgcgg
      421 gcaaggaact cctcccgggg catcgtcccc tccgtcgggg ggtcccccgc ccggaaccgc
      481 gccgccaggt cgtcccacgg cacccccggc aggcgccgcg tcaccacgat cgtccgccgc
      541 tccacgatcc gccccctccc gcggggatct tccgtccccg ggggggtttc attatatacc
      601 cgaataaatt gacagaaggc ccgcagggag tataatcttc cctttccggc aggatcatcc
      661 tattaccgtg caggaggttc ggatatggcc gtcaaagtcg gcatcaacgg gttcgggcgg
      721 atcggccgga acttcttccg cgccgcgtac aaggatccat cgctccagat cgtggccgtc
      781 aacgacatca ccgacgcgaa gaccctggcc cacctcctga agtacgactc cgtgcacggc
      841 cgcttcgagg cgtccgtcga ggtgaaggaa aacgcgatcg tggtgaacgg caaggagatc
      901 caggtcctcg cctgcaagga cgccgccgat ctgccgtggg gcaagctggg ggtcgagatc
      961 gtcatcgagt ccaccggccg gtacacggac cgggacggcg cggggaagca catcgcggcg
     1021 ggcgcgaagc gcgtgatcat ctccgccccg gcgaaggggg aggacgcgac cttcgtcatg
     1081 ggcgtcaacg agaagacgtt cgacccggcg aagcatttca tcctttccaa cgcctcctgc
     1141 accacgaact gcctcgcccc ggtcgccaag gtgctgctcg acaccttcgg gatcgagcgc
     1201 ggcctgatga ccacgatcca cgcctacacg aacgaccaga agatcctcga cctcccgcac
     1261 aaggacctgc gccgggcgcg ggccgcgggg gtgtcgatga tcccgacgac cacgggagcc
     1321 gccaaggccg tctcgctcgt catccccgag ctgaagggaa agctcgacgg gatggcgatc
     1381 cgcgtcccca ccccgaacgt ttccgtggtg gacctcacgg cggagctgtc gaagaacgcc
     1441 acggcggaag aggtcaacgc ggcgatgaag aaggcctccg aggggcccat gaaggggatc
     1501 ctgcagtacg tggacgagcc gctcgtctcg atcgatttca accacgaccc ggcctcgtcc
     1561 tgcttcgacg ccctctccac gaaggttctc ggcgggaaga tggtgaaggt gctgtcctgg
     1621 tacgacaacg agtgggg
//
LOCUS       DATGYW010000281         2863 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_400767, whole genome shotgun sequence.
ACCESSION   DATGYW010000281 DATGYW010000000
VERSION     DATGYW010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2863
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400767"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1004
                     /gene="kdpB"
                     /locus_tag="VK429_03935"
     CDS             <1..1004
                     /gene="kdpB"
                     /locus_tag="VK429_03935"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020715566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HLN90989.1"
                     /translation="PEGRSIVVLAKQFGLRGRNLSEMPHAHFIAFSAQTRMSGVDVDG
                     RKIRKGAADAVRNFVGGRFPAEVEDAITRVSFQGGTPLVVADSARILGTVYLKDIVKG
                     GLSDRFERFRAMGIRTVMITGDNPLTAAAIAREAGVDDFLAEASPTDKLALIRKEQAD
                     GYLVAMTGDGTNDAPALAQADVGVAMNTGTQAAKEAGNMVDLDSNPTKLIEIVEIGKQ
                     MLMTRGALTTFSIANDVAKYFAILPAMLIGAFPVIGPLNIMRLVSPQSAILSAVIFNA
                     LIIVALIPLALRGVHFRPLGAGALLRRNLLVYGLGGVLLPFPGIKIIDIAVNLFHLA"
     gene            1017..1598
                     /gene="kdpC"
                     /locus_tag="VK429_03940"
     CDS             1017..1598
                     /gene="kdpC"
                     /locus_tag="VK429_03940"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020494030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
                     /protein_id="HLN90990.1"
                     /translation="MKDLVAELRASIAATLLLAVLCCGIYPAVVWAVGQGLFSNKANG
                     SLVRVDGNVVGSSLLAQGFTAPNYFHPRPSAAGKGYDAANSGGSNLGPTSKTLIDGVQ
                     DRVAAYRAENVLPPDARVPADAVTSSASGLDPHISVRNALLQAPRVAKARGIGEKDVL
                     AKIGAHTEGRTLGFLGEPRVNVLTLNLSLDGKL"
     gene            1604..>2863
                     /locus_tag="VK429_03945"
     CDS             1604..>2863
                     /locus_tag="VK429_03945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012466660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN90991.1"
                     /translation="MPEERADTFLRLIRRAGRGRLKIYLGYGAGVGKTYQMLLEGHRL
                     KDEGIDVVVGLVETHGRAETAKLIEGLEVVPRRRQEYRGVGLEEMDLTAVLARKPQVA
                     LIDELAHTNVPGSRNPKRYEDVQDILAEGIHVITTLNIQHLESLYDIVEKATHVKIRE
                     RIPDTVLGEADQLVNVDLTTEDLRKRLLEGKVYPPERIQTALENFFKAANLEKLRELT
                     LRELASQIDQRRREIPGEEAVAAPDQIMVCLSSRGPNSEMLLRYASRLAGKFNRNWYA
                     VYVQTPSEEPTVIDAHTQRILSGTLTLAKQLGAMVFTYKGEDIEDTILRFAREYRVGT
                     IVVGSPTPLPAWKRWKGERSTVDRLVHDARGMTVVVLDTREEGAAHPGPTPERGESGA
                     PPARTTEGTVPPASRQPVLSTLIRPGGI"
BASE COUNT          534 a          925 c          969 g          435 t
ORIGIN      
        1 ccccggaagg ccgcagcatc gtcgtccttg cgaaacagtt cggcctccgg gggaggaacc
       61 tctcggagat gccccatgcc catttcatcg ccttctcggc gcagacgcgg atgagcggtg
      121 tcgatgtgga cgggaggaag atccgcaagg gggcggcgga cgccgtcagg aacttcgtcg
      181 ggggccggtt ccccgcggaa gtggaggacg cgatcacccg cgtttccttc caggggggga
      241 cccccctggt cgtcgcggac agcgcccgga tccttgggac ggtgtacctg aaagacatcg
      301 tcaagggggg gctgagcgac cggttcgaga ggttccgggc gatggggatc aggacggtga
      361 tgatcaccgg ggacaacccg ctcacggccg cggcaatcgc ccgcgaagcg ggggtggacg
      421 acttcctcgc ggaggctagc cctacggaca agctggcgct catccggaag gagcaggcgg
      481 acggctacct cgtggccatg acgggggacg ggaccaacga tgcccccgcc cttgcgcagg
      541 ccgacgtggg ggtggcgatg aacacgggga cccaggccgc caaggaggcg gggaacatgg
      601 tggacctgga ctccaacccc accaagctca ttgaaatcgt ggagatcggc aagcagatgc
      661 tcatgacgcg gggggcgctc accaccttca gcatcgccaa tgacgtggcc aagtatttcg
      721 ccatcctccc ggccatgctg atcggggcct tcccggtgat cggaccgctg aacatcatgc
      781 ggctggtttc cccccaaagc gctatcttaa gcgccgtcat cttcaacgcc ctcatcatcg
      841 tcgcgctcat ccccctggcc ctgcgcgggg tgcatttccg gccgctgggc gccggtgcgc
      901 tgctgcgccg caacctcctc gtctacgggt tgggcggcgt gctgctccct ttcccgggga
      961 tcaagatcat cgacatcgca gtgaacctgt tccatctcgc gtgaggaggg ggagccatga
     1021 aggaccttgt cgcggagctc cgcgcgtcga tcgccgccac gctgctgctg gcggtcctgt
     1081 gctgcggcat ctacccggcg gtcgtctggg ccgtcggcca gggactgttt tccaacaaag
     1141 ccaacggctc cctcgtccgg gtggacggga acgtcgtggg atcctccctc ctggcccagg
     1201 ggttcaccgc tccgaactat ttccaccccc ggccgtcggc cgcggggaag gggtacgacg
     1261 ccgccaattc cgggggttcg aacctggggc ccacgtcgaa aacattgatc gacggcgtcc
     1321 aggatcgcgt cgccgcctac cgggcggaaa acgtcttgcc cccggatgct cgggtgccgg
     1381 ccgacgccgt gacgtcctcg gcgagcgggc tggatcccca catcagcgtg cggaatgcct
     1441 tgctgcaggc gcctcgcgtg gcgaaggcgc gcggcatcgg cgaaaaggat gtcctggcca
     1501 agatcggagc gcacacggaa gggagaaccc tggggttcct gggggaaccc agggtaaacg
     1561 tcctgacgct gaacctttcg ctggacggta aactgtaacc gcgatgccgg aagagcgggc
     1621 cgacacgttt ctccgactga tccgccgcgc agggcgcgga cggctgaaga tatatctcgg
     1681 gtacggagcc ggcgtcggga aaacgtacca gatgctcctg gaagggcacc gcctcaagga
     1741 cgaagggatc gacgtcgtcg tcgggctggt ggagacccac ggccgcgcgg aaaccgcgaa
     1801 gctgatcgag gggctcgaag tcgtcccgcg ccgccgccag gaataccggg gcgtgggcct
     1861 cgaggagatg gaccttacgg ccgtcctggc aaggaaaccc caggttgccc tcatcgacga
     1921 actggcgcac accaacgtcc ccggaagccg gaaccccaaa cgatacgagg atgtccagga
     1981 tatccttgcc gaggggatcc acgtcatcac cacgctgaac atccagcatc tggaaagcct
     2041 ctacgacatc gtggagaaag cgacccacgt caagatccgg gagcggatac cggacacggt
     2101 gctcggcgag gcggaccagc tcgtgaacgt cgacctgacg accgaggatc tccgcaagcg
     2161 cctgctggag gggaaagtct atccgccgga acgcattcag actgcgctgg agaacttctt
     2221 caaggcggcg aatctggaga agctccgcga attgactctc cgggagctcg cctcccagat
     2281 cgaccagcgc cggcgggaga tcccgggaga ggaggccgtc gcggccccgg accagatcat
     2341 ggtgtgcctg agctcccggg gaccgaacag cgagatgttg cttcgatacg cttccaggct
     2401 ggcgggaaaa ttcaacagga actggtacgc cgtctacgtg cagaccccct ccgaagagcc
     2461 gacggtcatc gacgcgcata cacagcgcat cctctccggt accctgaccc tcgccaagca
     2521 gctgggggcg atggtcttca cctacaaggg ggaggacatc gaagacacca tcctccgctt
     2581 tgcccgggaa taccgggtcg ggaccatcgt cgtgggcagc ccgactcccc tccccgcctg
     2641 gaagcgctgg aagggggagc gcagcacggt ggaccggctg gtccacgatg cgagggggat
     2701 gaccgtcgtc gtcctcgaca cgagggagga aggggcggcg cacccggggc cgactccgga
     2761 gaggggggaa agcggcgcgc ctcccgcgcg aaccaccgaa ggaacggttc ctcccgcttc
     2821 caggcagccg gtcctgagca ctctgatcag acccgggggc atc
//
LOCUS       DATGYW010000282         2033 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_454893, whole genome shotgun sequence.
ACCESSION   DATGYW010000282 DATGYW010000000
VERSION     DATGYW010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454893"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..580)
                     /locus_tag="VK429_03950"
     CDS             complement(<1..580)
                     /locus_tag="VK429_03950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase family protein"
                     /protein_id="HLN90992.1"
                     /translation="MGVTVTHHPVRILTDILRAGRETPAGIESRQQERLHHLVAFARE
                     HSVFYGKLYSSLPSVIHDPRILPPVSKRDLMANFDGWATDAAVRWETAEAFVADLARV
                     GRYYLDRYLAFATSGTTGRPAVFLHDRGAVNVYIALMLARRLPTLIAGGTKASFLGNR
                     GRMATIITTGGHFTSSVIESLVRSRFPRLSGRN"
     gene            745..840
                     /locus_tag="VK429_03955"
     tRNA            745..840
                     /locus_tag="VK429_03955"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:780..782,aa:Sec,seq:tca)
     gene            complement(851..1408)
                     /locus_tag="VK429_03960"
     CDS             complement(851..1408)
                     /locus_tag="VK429_03960"
                     /inference="COORDINATES: protein motif:HMM:NF014707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HLN90993.1"
                     /translation="MQLLCDIPLGTEVLVHICCAPDASYGIRALRDRFDVTGFFYNPN
                     IDPREEFRKRLLATLDLQEKAPFPMVVGAGGEEAWEEDARGLENEPERGRRCEACVRL
                     RLRETARKATELGMPAFGTVLTVSPKKDAAMVNRVGREEGERAGIRFVEADLKKRDGY
                     LKSVRISREMGLYRQNYCGCRYSMR"
     gene            1572..>2033
                     /locus_tag="VK429_03965"
     CDS             1572..>2033
                     /locus_tag="VK429_03965"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HLN90994.1"
                     /translation="MRPADLLLGLMFNVPLLSILGVHEMGHYTAARRHRVRVSPPYFI
                     PFLPIPPLPGTMGAVIKLKSPFPDRNALMDIGAAGPLAGAVVAIPVLIAGLALSEVRQ
                     ATGSLGVPLGESLLFKLLSRVVLGEIPAGYDVILHPVAYAGWLGMYITMLNL"
BASE COUNT          323 a          698 c          626 g          386 t
ORIGIN      
        1 ggttgcggcc ggacagtctc ggaaaacggg accggaccag agactcgatg acggaactgg
       61 taaagtgccc ccccgttgtg atgatggtcg ccatacggcc ccggtttccc aggaatgaag
      121 ccttggtccc gcccgcgatc agcgtcggga gtcgacgcgc cagcatcaaa gcgatgtaga
      181 cgtttacggc cccgcgatcg tgaaggaaca cggcgggccg tccggtcgta cccgatgtgg
      241 cgaaggcaag gtagcggtcc aggtagtacc ttccgacccg tgccaggtcg gcgacgaaag
      301 cctccgccgt ttcccagcgc accgcggcgt cggtcgccca cccgtcgaaa ttcgccataa
      361 ggtcccgctt cgaaaccggc ggcaggatcc ggggatcgtg gatgacggag ggaaggctcg
      421 agtacagctt cccgtaaaaa accgaatgct cccgcgcaaa ggctacgaga tggtggagcc
      481 gctcctgttg gcgcgattca ataccggctg gtgtttcgcg gcctgcccgc aggatatccg
      541 tcaggatccg gaccggatga tgtgttaccg tgactcccat gaacggcccc ttgctgatca
      601 gcctcctgac actgaagccc gcttacgttc ttcccctgta aacgcacctc gatcttccgt
      661 ttcatcccgc gctttctcca tccgaggaaa tcggacatgg tgtattatcg gcacgaaggg
      721 cacgagatcg tacgcccggt ggacggaagc ggatggggcg ctggtggccc ccccggactt
      781 caaatccggt cgggaggcgg aaacgtctcc ggtgggttcg attccctcac gcttccgcca
      841 tgcttcatcc ctacctcatc gagtaccggc acccgcagta gttctggcgg tacagcccca
      901 tctccctgct gatccggacg cttttcaggt agccatccct ctttttcagg tcggcctcga
      961 cgaagcggat tccggcgcgc tccccctcct cgcgtcccac ccggttcacc atcgcggcgt
     1021 ccttcttcgg gctgacggtc agcaccgtgc cgaatgcggg catcccgagc tccgtcgcct
     1081 tcctcgccgt ctcccgcagc cgcagccgga cgcacgcctc gcaccggcgt ccgcgctcgg
     1141 gctcgttctc cagtccccgc gcgtcctctt cccacgcctc ctcgccgccg gcgccgacca
     1201 ccatggggaa gggcgccttc tcctgcaggt cgagggtagc gaggagccgt ttccggaatt
     1261 cttcccgggg atcgatgttt gggttataaa agaagccggt gacatcgaac cggtcccgca
     1321 acgcgcgaat gccgtacgag gcgtcgggtg cgcagcagat gtggaccagc acttccgtgc
     1381 ccaacgggat gtcgcaaagg agctgcacga gggaacccgc ccccccctgt cggtgatctt
     1441 acaggggaca gttaaccgga ttttcccccg gaggggaagg agagattccc acggtaccga
     1501 tcctgctgct tctggccacc ttcgtgacga cgctgttcgc cgggtcgttc ctcgcagggg
     1561 gggatccctt ggtgcgtccc gcggacctcc tcctcggcct catgttcaac gtcccgctgc
     1621 tgtcgatcct cggggtgcac gagatggggc actacacggc agcgcggcgg caccgcgtcc
     1681 gggtctcccc gccgtatttc atccccttcc tcccgatccc gccgctgccg gggacgatgg
     1741 gcgcggtcat caagctgaaa tccccgttcc cggaccgcaa cgccctgatg gacatcggcg
     1801 ccgcgggtcc gctggccggg gcggtggtcg cgatccccgt tctgatcgcc gggctcgccc
     1861 tctcggaggt ccggcaggcg acgggctccc tcggggtgcc gctgggggaa tcccttctgt
     1921 tcaagcttct ctcgcgggtc gtcctcgggg agatcccggc ggggtacgac gtgatccttc
     1981 accccgttgc gtacgcaggc tggctcggga tgtatatcac catgctgaac ctc
//
LOCUS       DATGYW010000283         2032 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_175579, whole genome shotgun sequence.
ACCESSION   DATGYW010000283 DATGYW010000000
VERSION     DATGYW010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2032)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2032)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2032
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175579"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1055)
                     /gene="mqnE"
                     /locus_tag="VK429_03970"
     CDS             complement(<1..1055)
                     /gene="mqnE"
                     /locus_tag="VK429_03970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011344700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HLN90995.1"
                     /translation="METELRRIRDKVEAGERLSEDDALALYRTREILAIGEMAALANR
                     RANGDRVHFIVNRHVNPTNICVNRCRFCAFSKERNDPLAYTMTMDEILRRAEEAREQR
                     ATELHVVGGLHPDLPFDFYLTMLRSLRERYPSLHVQAFTAVEIDYFGKITGLPLTEVI
                     SQLKDAGLGSLPGGGAEIFAPEVRNEICPEKISGDRWLEVMEAVHVAGLRSNATMLYG
                     HVETLESRVDHMRRLRDLQDRTGGFQSFIPLAFHPKNTEIAKGYTTGLEDLLALAVAR
                     LYLDNFRHIKSFWIMVGPKLAQISLHFGVDDIDGTVVEEKITHAAGAQAGQEMSVDEL
                     VTMIRQAGRIPVERDTL"
     gene            complement(1024..>2032)
                     /locus_tag="VK429_03975"
     CDS             complement(1024..>2032)
                     /locus_tag="VK429_03975"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN90996.1"
                     /translation="GGFCGIHPTSFAVVPLVAKGEARGAIYVDNLFQGRKIGDEDIQV
                     LTMFASKASLAMENASLYESLQDALDTVRTTQDQLMQSEKLMALGEMAARIAHEIKNP
                     LTAIGGFARRIASPKPGGGTPPVGRYARIILKEVERLERIINETLYFSKERIPAFRIV
                     NLNTEIRETLSMFREELEESRISTVVDLFQDLPMISVDPDQLRQVLWNLVSNAIQAMG
                     GTGTLTVSTRPAVPGEGTGVVFQVSDTGGGIPHDVVHNIFNPFFTTKAKGTGLGLPIV
                     HSIVEKHGGTIHLDNRDGVGVTFSVFLPIFPKEGGTGERILEQLRKGGTDGNGTAANQ
                     G"
BASE COUNT          321 a          686 c          633 g          392 t
ORIGIN      
        1 tagagggtgt cccgctcgac ggggatcctc cccgcctggc ggatcatcgt caccagctcg
       61 tcgacggaca tctcctgtcc cgcctgcgcg ccggccgcgt gggtgatctt ctcctcgacc
      121 acggtcccgt cgatgtcgtc caccccgaag tgcagggaga tctgcgccag cttcggaccc
      181 accatgatcc agaacgactt gatgtggcgg aagttgtcga ggtagagccg cgccaccgcc
      241 agcgcgagca ggtcttcgag ccccgtggtg taccccttcg cgatctccgt gttcttcggg
      301 tggaaggcca gggggatgaa cgactggaac cctccggtgc ggtcctgcag atcccgcagg
      361 cgccgcatgt ggtccacgcg cgactccagc gtctccacgt ggccgtagag catcgtggcg
      421 ttgctccgaa gccccgccac gtggaccgcc tccatcactt cgagccaccg gtcccccgaa
      481 attttctccg ggcagatttc gttccggacc tccggggcga agatctccgc gcctcctccg
      541 gggagggatc cgagccccgc atccttcaat tgggagatca cctcggtcaa cggaagcccg
      601 gtgatcttgc cgaaatagtc gatctccacc gcggtaaacg cctggacgtg cagggagggg
      661 taccgttccc gcagggagcg cagcatcgtc aggtagaagt cgaaggggag gtccgggtgc
      721 aaccccccga cgacgtgaag ttccgtggcc cgctgctccc gggcctcctc cgcccgtcgc
      781 aggatctcgt ccatcgtcat cgtgtacgcg agagggtcgt tccgctcctt gctgaacgcg
      841 cagaacctgc accggttcac gcagatgttc gtcgggttca cgtgccggtt gacgatgaag
      901 tggacgcggt cgccgttcgc ccgccggttc gccagggccg ccatttcccc gatggcgaga
      961 atttcccgcg tgcggtagag ggcgagcgcg tcgtcctccg atagccgctc ccctgcctcg
     1021 accttatccc tgattcgccg cagttccgtt tccatccgtt ccgcccttgc gaagttgctc
     1081 gaggatcctc tccccggttc caccctcctt cggaaagatg ggaaggaaga ccgagaaggt
     1141 tacaccgacc ccatcccggt tgtccagatg gatcgtcccg ccgtgcttct cgacgatgga
     1201 gtggacgatc ggaagcccga gtccggtccc ctttgccttc gtggtgaaga acggattgaa
     1261 gatgttgtgc accacgtcgt gcgggattcc tccgccggtg tcgctcacct ggaaaacgac
     1321 gccggtcccc tccccgggga cggcgggacg cgtggagacc gtgagggtgc cggtccctcc
     1381 catcgcctgg atggcgttgg agacgaggtt ccacagcacc tgccgcaact ggtccggatc
     1441 cacggagatc atggggagat cctggaaaag gtcgaccacc gtcgatatcc gcgactcctc
     1501 gagttcctcc cggaacatcg acagcgtctc ccggatctcg gtgttcaggt tgacgatccg
     1561 gaacgcgggg atcctctcct tggagaagta gagcgtctcg ttgatgatcc gctccagccg
     1621 ttcgacttcc ttcaggatga tccgggcgta cctccctacc ggaggggttc ccccgccggg
     1681 cttgggggag gcgatccgcc gggcgaaccc gccgatcgcg gtcagggggt tcttgatctc
     1741 gtgggcgatc cgggccgcca tctccccgag cgccatgagc ttctcgctct gcatcaactg
     1801 gtcctgcgtg gtccggacgg tgtcgagcgc gtcctgcagc gactcgtaga gggaggcgtt
     1861 ctccatcgcg aggctcgcct tggaggcgaa catcgtgagc acctggatgt cttcgtcgcc
     1921 gatcttcctc ccctggaaca ggttgtccac gtagatcgct cctcgcgcct cccccttggc
     1981 caccaggggg acaactgcga aggaggtcgg atggatgccg cagaaccccc cc
//
LOCUS       DATGYW010000284         3365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_294313, whole genome shotgun sequence.
ACCESSION   DATGYW010000284 DATGYW010000000
VERSION     DATGYW010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3365
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294313"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /locus_tag="VK429_03980"
     CDS             complement(<1..250)
                     /locus_tag="VK429_03980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018446440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase"
                     /protein_id="HLN90997.1"
                     /translation="MGAAAGVAVGATLPGILAGRLAVSGGLAVPASAADRIATAGQIK
                     VYSVEKGTYVMSETVVKTKEEWKKALTPEQYHILREKGT"
     gene            602..1138
                     /locus_tag="VK429_03985"
     CDS             602..1138
                     /locus_tag="VK429_03985"
                     /inference="COORDINATES: protein motif:HMM:NF024273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HLN90998.1"
                     /translation="MIPIFRLVIPVLETTPHRWIQLAEKLTPDLFQRKPASTEWSAYD
                     CLRHIVDTERSVFPARIGYLLRGEDFPAFNPDEGGQDRRENVTPIELAAEFAKLRAGS
                     LALLSKVVEGDLKRTARHQELGMVTLGEMIHHWAGHDLMHTVQGERAILQPFIDGCGP
                     WKRYFSDHTIPPSQQGGR"
     gene            1144..1965
                     /locus_tag="VK429_03990"
     CDS             1144..1965
                     /locus_tag="VK429_03990"
                     /inference="COORDINATES: protein motif:HMM:NF015325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HLN90999.1"
                     /translation="MMKLLGIIGSPRKMGNCELMVKEIATQVPGGTQLSMVRLVDKEI
                     RPCKACYRCLTGDCPHQDDFPGVLRAIMEADAVVVAAPAYLRGTHSSLQRFLDRGLQA
                     YRHVDALYGKPAVAVATAGVKDGEGSALMGIENFIRQLGMSLKGRAVVRATFPGDAIV
                     FEEGRNTAHRLAAALVSPDDYVPEGVSCPECRGTYFEFRGTETVYCITCGGTGTFSVD
                     GGSVRLEISPPAHSWRKKEDRTSHGKWLIGQREEFLRQRIRLKDAVKPYLGGEFI"
     gene            1965..2561
                     /locus_tag="VK429_03995"
     CDS             1965..2561
                     /locus_tag="VK429_03995"
                     /inference="COORDINATES: protein motif:HMM:NF028235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HLN91000.1"
                     /translation="MRKDGRETRRDIIEKSLQIFSVKGYYNTSISDIMAATRLTKGGL
                     YSHFDSKEALWNAAYERAVEIWRGIVFKGVRKVSDPLDRIAKTIENDLRDYCCGEVFE
                     GGCFFFNSLVELSGQSPVMSGRIVEGFVQFADLLASWLEEAKSEGKLKPGVKIKEVAD
                     FIVTSINGAAALYVATRDIRFPRASERQLNAYIQSLRS"
     gene            2576..3346
                     /locus_tag="VK429_04000"
     CDS             2576..3346
                     /locus_tag="VK429_04000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014745236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HLN91001.1"
                     /translation="MANVVYEKRDRIGYVTLNRPEALNALDDGLNDALWDVWADFNAD
                     DSVDIAIVTGAGKAFCAGADLKSFLPKWEHATMLDVRRNAAKGIGGGITRGQHRITKP
                     IIAAVNGFAIGGGFELALACDIRIASENAKFGVFEVRQGLHQGDGGIVRLVAIAGVAT
                     ALDLTLTGREVSAEEAYRLGLVNKVVPHDELLPTAELWARMILANGQQAIRSAKETIL
                     EVIGRPLDDALRLETVNGYSSIGDFREVSERLRKFFGK"
BASE COUNT          678 a          984 c         1098 g          605 t
ORIGIN      
        1 ccgtcccctt ctccctcaga atgtgatact gctcgggcgt cagcgctttt ttccactctt
       61 ccttcgtttt gacgacggtt tcactcatga cgtaggtccc cttctcgacg gaatacacct
      121 tgatctgccc cgcggtcgca atccggtcgg cggcactcgc cggaaccgcg aggccacccg
      181 aaacggcgag ccggccggcg aggatcccgg gaagcgtcgc gcccaccgcg acaccggccg
      241 ccgctcccat catccggaga aaatccctgc gtgtggcccc tgatcgcata atgaatcccc
      301 ccttgcagaa taagatgcaa tgttgttccc ctggatgccg atccttcccc ttcggatgca
      361 atggcctctc ccgggccacc cccggaataa ccttgatgtc tgttggtcgc gacgcaagcg
      421 gaatccttac atggacaata cttcagatcg aagggtgcac ttcgcgaggg gattatcctt
      481 ggggaggtct cccccgcgat aatgtttcgg ggattgacag gcacccggcc ccgtgtatta
      541 attaagaccg gtcggtatcc ttcggggcgg cggaggaacc cgggataccc aggaggaaat
      601 catgattccc atattccggt tggtcattcc cgtgctggag acgacacctc accggtggat
      661 ccagttggcg gaaaagctga cgcccgacct gtttcaaagg aaaccggcgt cgaccgagtg
      721 gtcggcgtac gactgtttac ggcacatcgt ggacacagag agatcggtgt tccctgcacg
      781 catcgggtat ctgctgcgcg gtgaggattt cccggcgttc aacccggacg aagggggaca
      841 agatcggcgg gagaatgtca caccgatcga attggccgca gaattcgcca agctgcgggc
      901 ggggagcctg gcgctgttgt cgaaggtagt ggagggcgac ctgaagcgca cggcgcggca
      961 ccaggagctg ggaatggtga ccctcgggga gatgatccac cattgggcgg ggcacgacct
     1021 gatgcacacg gtccagggcg agagggcgat attgcaaccg ttcatcgacg ggtgcggccc
     1081 ctggaagcga tatttttccg accacaccat cccgccttcg cagcaaggag gtcggtgacg
     1141 gagatgatga aacttctcgg gatcatcggc tccccccgca agatggggaa ttgcgagttg
     1201 atggtgaagg agatcgccac ccaggtgccg ggggggacgc aactatcgat ggtgcgcctt
     1261 gtcgataagg agatccgtcc ctgcaaggcg tgctaccggt gcctgaccgg ggattgccct
     1321 caccaggacg atttccccgg agtgctgcgc gcgatcatgg aagcggacgc ggtggtcgtc
     1381 gccgcaccgg cgtacctccg gggcacccat tccagcctcc agcggtttct tgatcgcggc
     1441 ctccaggcat accgccacgt ggacgcccta tacggaaagc cggcggtcgc cgttgccacc
     1501 gcgggcgtaa aagacggcga agggtcggcg ctgatgggca tcgaaaactt catccgccag
     1561 ctcgggatgt ccctgaaagg gagagccgtc gtgcgtgcca ccttccccgg agacgcgatc
     1621 gttttcgagg aaggaaggaa caccgcgcac cggctcgccg ccgccctcgt ttctccggac
     1681 gattacgttc ccgaaggcgt ctcttgtccc gagtgcaggg ggacgtactt cgaattccgg
     1741 gggacggaaa cagtgtattg catcacctgc gggggtaccg gaaccttttc cgtggatggc
     1801 gggagcgtgc gacttgagat cagtcccccc gcccactcct ggcggaagaa ggaggacagg
     1861 acgtcgcacg ggaagtggct gatcggccaa agggaggagt tccttcgcca gaggatccgc
     1921 ctgaaggacg ccgtgaagcc gtacctcggg ggggagttca tctgatgcgg aaagacggca
     1981 gggaaacgcg gcgggacatc atcgagaagt cgctgcagat cttctcggta aaggggtact
     2041 acaacacctc catcagcgac atcatggctg cgacccggct gacgaaggga ggactttact
     2101 cccacttcga cagcaaggag gcgctctgga acgccgcgta cgagagggcg gtcgagatct
     2161 ggagagggat cgttttcaag ggcgtgcgga aggtttccga cccgctggac aggatcgcga
     2221 aaacgatcga gaacgacctg cgcgactact gctgcgggga ggtgttcgag ggcggctgct
     2281 tcttcttcaa cagcctcgtc gaactctcgg gccagtcccc cgttatgagc ggtcgtatcg
     2341 tcgagggatt cgtgcagttt gcggaccttc tggcgtcctg gctggaagag gcgaaatccg
     2401 aaggcaaact caagcccggt gtgaaaatca aggaggtcgc cgacttcatc gtcacctcca
     2461 tcaacggcgc ggccgcgctg tacgtcgcca cccgtgacat ccggttcccc cgggcgagcg
     2521 aacgtcagct caacgcctac atccagtcgc ttaggtcatg aaggaaaggg aaacgatggc
     2581 caacgtcgtc tacgaaaagc gggaccggat cgggtacgtc accctgaaca ggccggaggc
     2641 gctcaacgcc ctggacgacg gattgaacga cgccctgtgg gacgtctggg ccgatttcaa
     2701 cgcggatgat tcggtcgata tcgccatcgt gaccggagca gggaaagcct tctgcgcagg
     2761 tgccgacctg aaatcgtttc tcccgaagtg ggagcacgcc accatgctcg acgtgcggag
     2821 gaacgcggcg aaagggatcg ggggtggaat caccaggggg cagcatcgga tcacgaagcc
     2881 gatcatcgcg gccgtcaacg gtttcgcgat cggaggcggc ttcgaacttg ctctcgcgtg
     2941 cgacatccgc atcgcctcgg aaaacgcgaa attcggagtg ttcgaagtga ggcagggatt
     3001 gcatcagggc gacgggggga tcgtccgcct cgtcgccatc gcaggggtgg ctacggccct
     3061 cgatctgacc ctgacggggc gggaggtctc cgcggaggag gcgtaccgac tggggctggt
     3121 gaacaaagtc gtaccgcatg atgagttatt accgacggcc gaactctggg cgcggatgat
     3181 cctcgccaac gggcagcagg cgatccggtc cgccaaagag acgatcctcg aggtcatcgg
     3241 ccgcccgctg gacgacgcac tgaggctgga aaccgtcaac ggatattcga gcatcgggga
     3301 tttccgcgag gtgtcggaga ggctgcggaa gttcttcggg aaatgatacc catggaggtg
     3361 cgtac
//
LOCUS       DATGYW010000285         1587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_294319, whole genome shotgun sequence.
ACCESSION   DATGYW010000285 DATGYW010000000
VERSION     DATGYW010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294319"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1587
                     /gene="lon"
                     /locus_tag="VK429_04005"
     CDS             <1..>1587
                     /gene="lon"
                     /locus_tag="VK429_04005"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011552101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HLN91002.1"
                     /translation="LPLRDIVVFPGMVVPLFVGRDKSVAALEAALSFDRLIFLSSQID
                     PSTNEPEEDEIHRVGTISHVIQMLKLPDGTVKVLVEGRLRAKIVDYLPNDRYFQVSAE
                     ESIPAPFTGPAAEAMIRNVHASFENFAKLSKKIPQDLVTQVSGVDDPARLADTLAAQL
                     PVKVTEKQAVLELETDAERLEKLLLLMESEVEVLEIERRIRGRVKKQMEKNQREFYLN
                     EQMRAIQKELGQGEEGRTELDELEEKIKKRGMGKEANQKAQKEIKKLRMMSPMSAEAT
                     VSRNYIDWLVSIPWQERTEDKLDIAEAERILDEDHYGLEKVKERILEYLAVRKLVSKL
                     KGPILCFVGPPGVGKTSLARSIARAMGRKFVRMSLGGVRDEAEIRGHRRTYIGAMPGK
                     IMQQIKKAGTVNPVFLLDEVDKMSADFRGDPSSALLEVLDPEQNSTFNDHYLDVDFDL
                     SDVFFVTTANMLHGIPGPLQDRMEIIRLHGYTEVEKLHIARGYLLPKKIEEHGLSKEK
                     VTFSDMAVLQIIRYYTREAGV"
BASE COUNT          315 a          509 c          526 g          237 t
ORIGIN      
        1 gcttcccctg cgggacatcg tcgttttccc cggcatggtg gtccccctgt tcgtcgggcg
       61 ggacaaatcc gtcgcggccc tcgaggcggc cctctccttc gaccgcctga tcttcctctc
      121 ctcccagatc gacccgtcca caaacgagcc ggaagaggac gagatccacc gggtcggcac
      181 gatcagccac gtcatccaga tgctcaagct ccccgacggc accgtcaagg tgctggtgga
      241 ggggcgcctg cgcgcgaaga tcgtcgatta cctcccgaac gaccggtact tccaggtgag
      301 cgccgaggag tcgatccccg cgccgttcac cggaccggcg gccgaggcga tgatccgcaa
      361 cgtccacgcc tccttcgaga acttcgccaa gctcagcaag aagatcccgc aggatctcgt
      421 gacccaggtc tccggggtcg acgacccggc gcgcctggcc gacaccctgg cggcccagct
      481 tcccgtcaag gttaccgaga aacaggcggt gctggagctc gagaccgacg cggagcggct
      541 cgagaagctg ctgctgctga tggagtccga agtcgaggtc ctcgagatcg agcggcggat
      601 ccggggacgc gtcaagaagc agatggagaa gaaccagcgc gagttctacc tgaacgagca
      661 gatgcgggcg atccagaagg agctcgggca gggcgaggag ggccgcaccg agctcgacga
      721 gctcgaggag aagatcaaga agcgggggat gggcaaggag gcgaaccaga aggcgcagaa
      781 ggagatcaag aagctgcgga tgatgtcccc catgtccgcc gaggcgaccg tcagccgcaa
      841 ctacatcgac tggctcgtct ccatcccgtg gcaggagcgg accgaggaca agctcgacat
      901 cgccgaggcc gagcggatcc tcgacgagga ccattacggc ctggagaagg tcaaggagcg
      961 gatcctcgaa tacctcgccg tccggaagct cgtctcgaag ctgaagggcc cgatcctgtg
     1021 cttcgtcggg ccgccgggcg tggggaagac ctcgctcgcc cgttccatcg cgcgggcgat
     1081 gggccggaag ttcgtccgga tgtcgctggg cggggtgcgg gacgaggcgg agattcgcgg
     1141 tcaccgccgt acctacatcg gggcgatgcc cgggaagatc atgcagcaga tcaagaaggc
     1201 gggcacggtc aaccccgtct tcctgctcga cgaggtggac aagatgtcgg cggatttccg
     1261 cggcgacccg tcgtcggcgc tgctggaggt cctcgacccc gagcagaaca gcaccttcaa
     1321 cgaccactac ctcgacgtgg acttcgacct gtccgacgtc ttcttcgtca ccaccgcgaa
     1381 catgctccac gggatccccg ggccgctcca ggaccggatg gagatcatcc gtcttcacgg
     1441 gtacacggaa gtggagaagc ttcacatcgc ccgggggtac ctcctcccga agaagatcga
     1501 ggagcacggg ctctcgaagg agaaggtgac cttcagcgac atggcggtgc tgcagatcat
     1561 ccggtactac acccgcgagg ccggggt
//
LOCUS       DATGYW010000286         2628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_294342, whole genome shotgun sequence.
ACCESSION   DATGYW010000286 DATGYW010000000
VERSION     DATGYW010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2628
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294342"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..608)
                     /locus_tag="VK429_04010"
     CDS             complement(<1..608)
                     /locus_tag="VK429_04010"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLN91003.1"
                     /translation="MAEKWRTEKKRPTIKVLPWPAIPTPTVDEVYAGVDEKRKEYSLW
                     VESAVRQQFNADKPESLDGIRVLDMTANMEIGHWCSSHFSELGAEVIMVEPPGGDPIR
                     KLTPFGREEYMFQSKNGEKVGARYLSEARNKFSVTLNLETEQGRALLKKIIPQVDILI
                     ENAPPGHYDKLGIGYRQLSEINPRLIYMWVGQRGQWGPLKDDA"
     gene            complement(902..1108)
                     /locus_tag="VK429_04015"
     CDS             complement(902..1108)
                     /locus_tag="VK429_04015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91004.1"
                     /translation="MMFEYMDKMVMFQDTPEGLTADMGWLKEAGENGWELVSSVPLIA
                     PNRDGIAYGTVVCQMILKRPKPTQ"
     gene            complement(1105..>2628)
                     /locus_tag="VK429_04020"
     CDS             complement(1105..>2628)
                     /locus_tag="VK429_04020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91005.1"
                     /translation="AVKGGSCGGEEEDGEFAFTGSMLSATWAFPRERKGEILSAFRGL
                     FSLPGGAAGMNSYVELVRHRLEGRATNLLANLGELPEAQLRFTMRIFGDCLDEETREK
                     MFDGYSEHRNENELREFAQQFVPAYTKYAVAELEEKKKDGERFEPPFLTREEYQEMAV
                     REKWPRIAEHLDEVDPLQLRREVARAAMLFRPYMLSDPGFNEGVLEFSLYYDLLERLR
                     SVPEAKLRETAVELASRIAQAVAEGATPQGEERLRGIRGLVASTAGLPADPETLLGAP
                     MEKVPREMPSEYRLRELAKTLATMSLKDLRLTALVHLDLLTAEEIRRFVSPFFAKYPS
                     FFEMPSKGLRELVLAVAEGLGDRTIAYFFDRYGTGRMAMTKPIDYIVWKLMPLEERNA
                     ALRRDNERMDSAMMSRHLARVLHSGSEVILSDVGRQIALLTDAGFEEDHGEILKRLGE
                     DGGERIKRLYDFVTLSFARSAGQRGEEREATYRAVRKAIADAAGISPREHGGEGSKG"
BASE COUNT          429 a          882 c          788 g          529 t
ORIGIN      
        1 gcatcgtctt tcaggggacc ccattggccg cgctggccga cccacatgta gatgagccgc
       61 gggttgatct cggagagctg ccggtagccg atccccagct tgtcatagtg tcccggaggc
      121 gcgttctcga tcaggatgtc gacctgcggg atgatctttt tcagcaacgc ccttccctgt
      181 tcggtctcga ggttgagcgt gacggagaac ttgttccgcg cctcggagag gtaccttgcg
      241 ccgacctttt ccccgttctt cgactggaac atgtactctt cgcggccgaa gggggtcagt
      301 ttccggatcg ggtcgccgcc cgggggctcg accatgatga cctcggcccc gagttcggag
      361 aagtgcgaag agcaccagtg gccaatctcc atgttcgcgg tcatgtcgag aacccggatc
      421 ccgtcgaggg attccggttt atcggcgttg aactgctgcc gcaccgccga ctcgacccac
      481 agcgagtatt ccttccgctt ctcgtcgacc cccgcgtaga cctcgtcgac ggtcggcgtt
      541 ggaatcgcgg gccacggaag aaccttgatc gtcggccgtt tcttttccgt acgccacttt
      601 tcagccatgc ttcccctcct tttgatattt actgccttcg agagccttgt gaggaactgg
      661 tttctacctt atccaactgc cggatatcgg tctcttcgtc gtcgttgccc ccctttccgc
      721 aagttttcaa ggacgccgac cccttggatg gaacgatttg gcgggtgaaa aaagccgccg
      781 aaaatcggga tgttccacga aaaggtcggc gtggttttat aaatgtgttt tattaatatc
      841 gcaacacgcc gtttcgtgtc aagacctttt ttactgataa aacatatttt gatcttttcg
      901 ctcactgcgt cggcttgggg cgcttgagga tcatctggca caccaccgtg ccgtaggcga
      961 tcccgtcccg gttcggggcg atgagaggaa cggaggagac gagctcccag ccgttctccc
     1021 ccgcctcctt cagccacccc atgtccgccg tcaacccctc cggcgtgtcc tggaacatca
     1081 ccatcttgtc catgtattcg aacatcatcc cttgctcccc tcccctccgt gttcgcgcgg
     1141 agaaatcccc gccgcgtcgg cgatcgcctt gcgcaccgcc cggtacgtcg cctcccgttc
     1201 ctccccccgc tgaccggcag atcgggcgaa cgacagcgtg acgaagtcgt agagccgctt
     1261 gatccgctcc ccgccgtcct cccccaggcg cttcaggatc tcgccatggt cctcctcgaa
     1321 tcccgcgtcg gtcagcaggg cgatctgccg ccccacgtcg gacaggatca cctcggaccc
     1381 ggagtggagg acccgggcga ggtggcgcga catcatcgcc gaatccatcc gctcgttgtc
     1441 gcgccgcagc gcggcgttgc gctcctcgag cggcatcagt ttccacacga tgtaatcgat
     1501 cggcttcgtc atcgccatcc ggccggtgcc gtaccgatcg aagaagtagg cgatcgtccg
     1561 gtcgcccagc ccctccgcga ccgccaggac cagttcgcgg agccctttcg atggcatctc
     1621 gaagaaggag ggatattttg cgaagaaggg ggagacgaac cgccgtatct cctcggcggt
     1681 cagcaggtcg aggtggacca gggcggtgag gcgcaggtcc ttgagcgaca tcgtcgcgag
     1741 cgtcttcgca agctcccgga ggcggtattc ggaaggcatt tccctcggaa ccttctccat
     1801 cggcgcgccc aggagcgtct cggggtcggc cggcaggccg gcggtggagg cgaccagccc
     1861 gcggatcccc cggaggcgct cctccccctg gggcgtggcc ccctccgcga cggcttgcgc
     1921 gatccgggac gcgagctcca ctgcggtttc ccgcagcttc gcctcgggta cggagcggag
     1981 acgctcgagg aggtcatagt aaagggagaa ctcgagaacc ccctcgttga acccgggatc
     2041 cgacagcatg tacggccgga agagcatggc ggcgcgggcc acttcccttc ggagctgcag
     2101 gggatcgacc tcgtcgaggt gctccgcgat ccggggccac ttctcccgga ccgccatctc
     2161 ctggtactcc tcccgggtga gaaagggggg ctcgaaccgc tcgccgtcct tcttcttctc
     2221 ctcgagctcg gcgacggcgt acttggtata ggcggggacg aattgctggg cgaactcccg
     2281 gagctcgttc tcgttccggt gctcgctgta cccatcgaac atcttttcgc gggtctcctc
     2341 gtcgaggcag tcgccgaaga tccgcatcgt gaagcgcagc tgggcttccg gaagctcgcc
     2401 gaggttcgcg aggaggttcg tggcgcggcc ctcgaggcgg tgacgcacca gctcgacgta
     2461 actgttcatc ccggcagcgc cccccggaag ggagaagagc ccccggaagg ccgaaaggat
     2521 ctcccccttg cgctccctcg ggaaagccca cgtcgccgag agcatcgacc cggtgaaggc
     2581 gaactcgccg tcctcctcct ccccgccgca cgacccgccc ttgacggc
//
LOCUS       DATGYW010000287         1991 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_126602, whole genome shotgun sequence.
ACCESSION   DATGYW010000287 DATGYW010000000
VERSION     DATGYW010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126602"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..995)
                     /locus_tag="VK429_04025"
     CDS             complement(153..995)
                     /locus_tag="VK429_04025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012646733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HLN91006.1"
                     /translation="MSRTADKIAHLRKTAFEHPEYIDVLRPFEEIFAYVDGKEGGTGI
                     RFALPGGNGAERVRGGLPLLSPEALSVDRDAETAFLSGLLDVLRRVGREGHADLDRIG
                     GGLSGDSLDLASLYVACLTRKRDVVEKAAAALSVQAPLLTFVLEIPLKTALERVSSSI
                     SPERFEEWKEGYCPVCGSRAGMAELAGDEGKRRLSCSTCFFLWAYPRIQCPYCGNTDP
                     ETLSYFTAGNGPTRVGVCRKCSRYLKTRDARLGNADVPLEAEDLATLHLDLLAGKEGF
                     ERGK"
     gene            complement(1020..1631)
                     /locus_tag="VK429_04030"
     CDS             complement(1020..1631)
                     /locus_tag="VK429_04030"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012530008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009061 - anaerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HLN91007.1"
                     /translation="MGKYVERFNTAERVLHWFVAASFLTLLLSGLGLYSRLFHGYFDL
                     FGGGEGAILAHKYAGAIFFVSSLMLFFNHAKEMFTFDDDDRKWIRSLGGYLSKNPEHI
                     NSGKFNAGQKMFGIFMGIATLLLGVTGIINWIPGSFPRGLVQFSLLLHGLLFVAFVML
                     MIVHVYLTTIGNPGTLEGMLYGNVRRIWARTHHPKWYKEVGGE"
     gene            complement(1624..>1991)
                     /locus_tag="VK429_04035"
     CDS             complement(1624..>1991)
                     /locus_tag="VK429_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012530009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="formate dehydrogenase N subunit beta
                     transmembrane domain-containing protein"
                     /protein_id="HLN91008.1"
                     /translation="FDRVGAGRLPACAQACPTQTLQYGGRDALIAKAKAGGKKLYGEN
                     ALEGLGVVYALEGKPETYGLPADPSIPTSIFLWKDVVRPLGILGFWGSVAAVVVHYVT
                     FGTRQLEEDGKGKGGDAHG"
BASE COUNT          338 a          702 c          637 g          314 t
ORIGIN      
        1 ggcgatcagc gtcgcgacgg ggacgccgtt gaccgtgagg gcgacgggga cttcccggac
       61 ggggagatga cgggcgggag ccagccggcg cccgtcgtac cgcaggacgg gaggggcgtc
      121 tccgcctttc gcgtcgtctc cggggaggcg gctcatttcc ccctctcgaa cccttccttc
      181 ccggccagca ggtccaggtg gagggtggcg aggtcttcgg cttccagcgg cacatccgcg
      241 ttcccgaggc gcgcgtcgcg cgtcttcagg taccggctgc atttgcggca caccccgacc
      301 cgggtcgggc cgttccccgc ggtgaaatag gagagcgttt ccgggtcggt gttcccgcag
      361 taggggcact ggatccgcgg gtacgcccag aggaagaagc aggtggagca ggagagccgc
      421 cgcttcccct catccccggc gagttctgcc atcccggcgc gggagccgca cacggggcaa
      481 tacccttcct tccactcctc gaaccgttcc ggggatatgg aagaggatac ccgctcgagg
      541 gcggtcttca acgggatctc caggacgaag gtgagcaacg gcgcctggac cgaaagggcg
      601 gcggccgcct tctccacgac gtcccgtttt cgggtgaggc aggcgacgta gagggaggca
      661 aggtcgaggg aatcgcccga aagccccccc ccgatccggt cgagatccgc gtgcccctcc
      721 ctgccgacgc ggcgcaggac gtcaagcagc ccggacagga aggctgtctc ggcgtcccga
      781 tcgacggaga gcgcctcggg ggagaggagc ggaagacccc cccgcacccg ctcggccccg
      841 ttcccccccg ggagggcgaa ccggatcccc gtcccgccct ccttcccgtc gacgtacgcg
      901 aagatctcct cgaacgggcg gagcacatcg atgtactccg gatgctcgaa cgcggtcttc
      961 cggaggtgcg cgatcttgtc cgccgtgcga ctcatccccc ccggatccct tcccgtcgtt
     1021 tattcgcccc ctacctcctt ataccatttc gggtggtgcg tccgcgccca gatcctgcgg
     1081 acgtttccgt acagcatccc ctcgagcgtc cccgggttgc cgatcgtggt gaggtagacg
     1141 tgcacgatca tcaacataac gaaggccacg aacaggaggc cgtggaggag cagcgaaaac
     1201 tggacaagcc cccgcggaaa cgacccgggg atccagttga tgatcccggt gacgccgagc
     1261 aggagggtcg cgatccccat gaagatgccg aacatcttct gccccgcgtt gaacttcccg
     1321 ctgttgatgt gctccggatt cttcgagagg tagcccccca gcgaccggat ccacttccgg
     1381 tcatcgtcgt cgaaggtgaa catctccttc gcgtggttga agaagagcat cagggagctg
     1441 acgaaaaaga tcgcccccgc gtacttgtgg gccaggatcg ccccctcccc gcccccgaac
     1501 aggtcgaagt agccgtggaa gaggcgggag tagagcccca gccccgacag gagcagggtg
     1561 agaaacgacg cggcgacgaa ccagtggagc acccgctcgg ccgtgttgaa ccgctcgacg
     1621 tatttaccca tgcgcgtccc ctcccttccc cttcccgtcc tcctcgagct ggcgcgttcc
     1681 aaaggtcaca tagtggacca cgacggcggc gacgctgccc cagaagccga ggataccgag
     1741 cggcctcacc acgtccttcc acaggaagat cgatgtcggg atcgacgggt ccgcgggaag
     1801 gccgtacgtc tcgggcttcc cctcgagcgc gtagacgacc cccagcccct cgagcgcgtt
     1861 ctccccgtac agcttcttcc cccccgcctt cgccttcgcg atcagggcgt cccggccccc
     1921 gtactgcagc gtctgggtcg gacacgcctg ggcgcacgcc gggagcctcc ccgccccgac
     1981 ccggtcgaaa c
//
LOCUS       DATGYW010000288         2572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_401062, whole genome shotgun sequence.
ACCESSION   DATGYW010000288 DATGYW010000000
VERSION     DATGYW010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2572
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401062"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1020
                     /locus_tag="VK429_04040"
     CDS             <1..1020
                     /locus_tag="VK429_04040"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLN91009.1"
                     /translation="EFRFPADAHLSDVTRILARGVRFRGGIAFGKDVTFSSLAEEGFD
                     AVLIAVGAREALRVPAAGGEDQGFHDALSFLVGVREHRISRLRGRVVVIGGGNVAIDA
                     ARCALRMGASEVTIACLESREAMPAFSWEIEAAVSEGATFLPGTAVIRFLLKDGRVAG
                     FEALKVDRVDLDPDGIVIPRTVPGTGFEVPADMVVMAIGSRADLSFLPAGVSRKPADP
                     GRNVFRLQFPGGEPKIPAYMCGDCARGPGTVVEASASGREAALNIFADLCVEEVGRGR
                     YKDNYRRRLEPQVTDSPEWRVRRRAERLPPEVARGTFDEVEMRFTDRCAREEAERCAR
                     CNISL"
     gene            1049..1399
                     /locus_tag="VK429_04045"
     CDS             1049..1399
                     /locus_tag="VK429_04045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011420752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HLN91010.1"
                     /translation="MKKFAMLMAVVMVAMFSASVIVAADAPAKVTVKDVQKTKPAVTF
                     DHKAHADRIGKCAECHHKDAAGKEQKCFACHKAEKKGDAISLKDAMHTKCKDCHSKDA
                     TKKAPTKCDGCHKK"
     gene            1572..>2572
                     /locus_tag="VK429_04050"
     CDS             1572..>2572
                     /locus_tag="VK429_04050"
                     /inference="COORDINATES: protein motif:HMM:NF016995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HLN91011.1"
                     /translation="MDRVWNFFTSVKLAIITLIVLAITSIFGTIIEQNQSPEKYHQIY
                     EDWAFALLDRLNMFDMYHSVWFLLLLVLFTVNLSCCTIDRFPKMLKVVRNPRTKLDEN
                     LEKTLSLSDRWKKKGTLSEWAGKYTEALSSSFAKPRITEADGQVHLYAETGVASRFGV
                     YVTHLSIIIIFIGAILGNVLGFKGYVNIPEGEAISKVPVRGGTLMQDLGFTVRCNAFS
                     LETYPSGQPKAYKSDLSVIDGGRESLRKTIVVNDPLQYKGIWFYQSSYGQAGGAMAQV
                     TVSRKDGTPVGALALAPNEPVPIDGYGIVRGVNYDQNFQGNGPALQVAVEKPGQPAAS
                     "
BASE COUNT          487 a          750 c          872 g          463 t
ORIGIN      
        1 gagttccggt ttcccgcgga cgcgcacctc tcggacgtga cgaggattct tgcccggggg
       61 gtgcgcttcc ggggcgggat cgccttcggc aaggacgtaa cgttctcttc cctcgcggag
      121 gaggggttcg acgccgtcct gatcgccgtg ggagcccgcg aggcgctgcg ggttccagcc
      181 gcgggagggg aggatcaggg attccacgat gcgctttcgt tcctcgtggg tgttcgggaa
      241 caccggattt cgcgactccg gggacgggtg gtcgtgatcg gcggcggaaa cgtcgcgatc
      301 gacgcggccc ggtgcgccct ccggatgggg gcgtcggagg tgacgatcgc ctgcctcgag
      361 tccagggagg cgatgccggc gttttcgtgg gagatcgagg cggccgtttc ggagggggcg
      421 acgttcctac cgggcacggc ggtgatccgt ttcctcctga aggatggaag ggtggccgga
      481 ttcgaggcgc tgaaggtgga ccgggtcgac ctcgacccgg acgggattgt catcccgcgg
      541 accgtccccg gcaccggatt cgaggtcccg gcggacatgg tcgtgatggc gatcggaagc
      601 cgggcagacc tctccttcct gccggcggga gtctcccgga aaccagcgga tccgggacgc
      661 aacgttttcc gcttgcaatt tcccgggggg gaacctaaaa tccccgccta tatgtgcggt
      721 gattgcgccc gcggccccgg cacggtggtc gaggcgtccg cctccgggcg cgaagccgcg
      781 ttgaatatct tcgcggatct ctgcgtcgaa gaagtcggaa gggggcggta caaggacaac
      841 taccgcaggc gcctcgaacc ccaggtgacc gacagccccg aatggagggt tcggcgcagg
      901 gcggaaaggc tccctcccga ggttgcacgt gggacgtttg acgaagtcga aatgaggttc
      961 acggatcggt gcgcgcgcga ggaagcggaa cggtgcgcac gttgcaatat ctcgctgtag
     1021 accacaaacc ggaagggggt gagcaaggat gaagaaattc gcgatgttga tggcagtcgt
     1081 catggtggcg atgttttcgg ccagcgtgat cgtcgcggcg gacgctcctg cgaaggtgac
     1141 cgtcaaggat gtgcagaaga cgaagccggc ggtcacgttc gaccacaagg cgcacgcgga
     1201 ccggatcgga aagtgcgcgg agtgccacca caaggacgcg gccggcaagg agcagaagtg
     1261 ctttgcctgc cataaggccg agaagaaggg cgatgcgatc tctttgaagg acgccatgca
     1321 cacgaagtgc aaggattgcc attcgaagga cgcaacgaag aaggctccga cgaagtgtga
     1381 cggctgccac aagaagtagg cgacccgcga tcccgcgagt gccgaaagag ggcggggagt
     1441 ttccccgccc tctttcgttc ggggaaggtt ccttttccgt ttgacggacg acgcccgccc
     1501 tgttatatag tattcattcc gaataactga aggtgccctg aatggccgac cagatacgca
     1561 ctgcatcccc gatggatcgg gtctggaatt ttttcacctc tgtcaagctg gccatcatca
     1621 ccctgatcgt cctcgccatc acgtcgatct tcggtacgat catcgagcag aaccagtccc
     1681 ccgagaagta ccaccagatc tacgaggatt gggcgttcgc tctcctggac cggctcaaca
     1741 tgttcgacat gtaccactcc gtctggttcc tcctcctgct cgtcctgttc accgtgaatc
     1801 tctcctgctg caccatcgac cgctttccga agatgctgaa ggtggtgcgg aacccgagga
     1861 cgaaactgga cgagaacctc gaaaagaccc tttcgctctc ggaccgctgg aagaaaaagg
     1921 ggacactttc ggagtgggcg gggaagtata cggaggcgct ctcttcatcc ttcgcgaaac
     1981 cgaggatcac cgaggcggac ggccaggtcc acctgtacgc ggagaccggc gtcgcttccc
     2041 gattcggcgt ctacgtgacc cacctttcca ttatcatcat cttcatcggg gcgatcctgg
     2101 gcaacgttct cggtttcaag gggtacgtga acatccccga aggggaggcg atctcgaaag
     2161 ttcccgttcg cggggggacg ctgatgcagg acctggggtt cacggtccgg tgcaacgcct
     2221 tcagcctcga gacgtaccca agcggccagc ccaaggcgta caagtccgac ctgagcgtga
     2281 tcgacggagg tcgggaatcg cttcggaaga cgatcgtggt gaacgatcct ctgcagtaca
     2341 aggggatctg gttctaccag tcgagctacg ggcaggcggg gggcgcgatg gcgcaggtga
     2401 cggtctcccg caaggacggc accccggtgg gagcgctcgc ccttgcgccc aatgagccgg
     2461 ttccgatcga cgggtacggg atcgtgcggg gtgtgaacta cgaccagaac ttccagggga
     2521 acggcccggc cctccaggtt gccgtggaga agcccgggca gccggcagcc tc
//
LOCUS       DATGYW010000289         1781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_126622, whole genome shotgun sequence.
ACCESSION   DATGYW010000289 DATGYW010000000
VERSION     DATGYW010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126622"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..1099)
                     /locus_tag="VK429_04055"
     CDS             complement(71..1099)
                     /locus_tag="VK429_04055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008166551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HLN91012.1"
                     /translation="MPQSIGTPALWGGFVVLTLVLMAVEIRAVRRNPHDMSMREASAW
                     TVGWVVLALLFGAGIAWRFGRQPAVEYLTGYVIEYALSVDNLFVFILIFKTFGVPPMY
                     QRPVLLWGILGAMIMRAAFILIGAALMSRFQWLLYVFGAFLIYTGGKILIGHDVETHP
                     EQNPVLKLFGKVFPVVRHFGDGNFIVKHRGQWYATALLPVLLVVEATDVVFAVDSIPA
                     IFAVTRDPFIVFTSNVFAILGLRALYFVLKTFMDLFRFLKVGLGLVLVFVGGKMCVEH
                     WLHVPAEVSLLVVVSLLGFSVAASLLWPSAAGKEVGEDGGAVDTGGETASGGSSGEAG
                     DDKMNPRE"
     gene            complement(1155..>1781)
                     /locus_tag="VK429_04060"
     CDS             complement(1155..>1781)
                     /locus_tag="VK429_04060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011984851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HLN91013.1"
                     /translation="GLERSYHGRPAGFRTHTLVCVTSSLLMLVTMYQAKWFTGAPLDT
                     VRVDPTRMAQGVMTGIGFLGAGVIMREGLTVRGLTTAASIWITAAIGILAGTGLYSAV
                     LVGSVITVGILTVFRKAENWMPSQIFANNTIVFGRAECMSETEIRELLLENGFSVGNI
                     SYRLLESGAQLEYRMTVRTMDRRNIEKLSKTLLGLTSIVEFNISMAGD"
BASE COUNT          379 a          582 c          528 g          292 t
ORIGIN      
        1 gacaggaacc ggatggtgtt gatcgcccgc agcgcgagcg cgtcgttccg cacggtggcc
       61 tccattgctt tcattcgcgt ggattcattt tatcatcgcc cgcttctccc gacgaacccc
      121 cgctggccgt ttcgccgccg gtgtcgacgg ccccgccgtc ctccccgacc tcctttcccg
      181 ccgccgacgg ccatagcagg gacgccgcca cggaaaagcc gagcagcgaa acgacgacga
      241 ggagggagac ctcggccgga acgtgcagcc aatgctccac gcacatcttc ccgcccacga
      301 agaccagcac cagccccagc cccaccttga ggaaccggaa gaggtccatg aacgtcttga
      361 gtacgaagta gagggcccgc aacccgagga tcgcgaagac gttcgaggtg aagacgatga
      421 acgggtcgcg cgtgacggcg aagatcgccg ggatcgagtc gacggcgaag acgacgtcgg
      481 tcgcctccac gacgagcagc accggaagga gcgccgtggc gtaccactgt cctcggtgct
      541 tcacgatgaa gttgccgtcg ccgaagtggc gcacgacggg gaaaaccttc ccgaagagct
      601 tgaggacggg gttctgctcc gggtgggttt ccacatcgtg gccgatgagg atctttccgc
      661 ccgtgtagat gaggaacgcc ccgaacacgt agagcagcca ttggaatcgg gacatgaggg
      721 cggcaccgat caggatgaag gcggcccgca tgatcatcgc tcccaggatc ccccacagga
      781 ggaccggccg ctgatacatc ggggggacgc cgaacgtctt gaagatgagg atgaagacga
      841 acaggttgtc gaccgagagg gcgtactcga tgacgtaccc cgtcaggtac tcgaccgccg
      901 gctgccggcc gaaacgccac gcgatccccg ctccgaacag cagggcgagg acgacccaac
      961 cgacggtcca tgcggacgct tcccgcatcg acatgtcgtg cgggttcctc cggaccgccc
     1021 tgatctccac ggccatcagg acgagcgtca aaacgacgaa gccaccccag agcgcgggcg
     1081 tgccgatcga ctgcggcaat ccgttggccc ccccccaccg aaaccacgaa agaggtacga
     1141 tgatacttgg ccgcttaatc ccccgccatg gaaatattga attcgacgat tgaggtcaac
     1201 cccaggaggg ttttcgacaa tttttcaatg tttcgacggt ccatggtccg cacggtcatg
     1261 cgatattcca gctgcgcccc gctttccagc aatcggtagc taatattgcc gacggaaaaa
     1321 ccgttttcta acagcaactc cctgatttcc gtctcggaca tgcattcggc ccggccgaag
     1381 acgatggtat tgttcgcgaa gatctgcgaa ggcatccagt tttccgcctt ccggaaaacc
     1441 gtcaatatcc cgacggtgat gacggatccg acgaggacgg cgctgtagag gccggtcccg
     1501 gcgagaattc ctatcgcagc cgtgatccag atggaagccg cggtcgtcaa cccccgcacg
     1561 gtaagccctt cccgcatgat gacacccgcg ccgagaaagc cgatcccggt catgaccccc
     1621 tgggccattc gcgtcgggtc cacccggacg gtatcgaggg gcgccccggt aaaccacttc
     1681 gcctggtaca tcgtgacgag catcagcagg ctcgatgtga cacaaaccag cgtatgcgtc
     1741 ctgaaaccgg ccgggcggcc atgataactc cgttccagcc c
//
LOCUS       DATGYW010000290         2125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_240511, whole genome shotgun sequence.
ACCESSION   DATGYW010000290 DATGYW010000000
VERSION     DATGYW010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240511"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..979
                     /locus_tag="VK429_04065"
     CDS             125..979
                     /locus_tag="VK429_04065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015131265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional helix-turn-helix domain-containing
                     protein/methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HLN91014.1"
                     /translation="MHPMDYSRIEKAILFLDEGFQRQPSLKEVARKVGLSEYHFHRLF
                     TRWAGISPKRFLQFLTAEYARGLLKESPNVLEAAWEAGLSGSGRLHDLIVNVYAVTPG
                     ELKEEGAGLTIHYGVHRGPFGDFLLAITGKGICALSFLGQGGARGAVEALRKEWAGSR
                     LVEDPDTTKTVANRIFAPTRQAGTPPLNVVVKGTNFQIKVWEALLRIPAGSVAAYEDV
                     AARIGTPKAVRAVGNAVGRNPVAFLIPCHRVLRKTGAFGGYGGGVARKKAILAWEWAR
                     IRGPGKER"
     gene            complement(980..>2125)
                     /locus_tag="VK429_04070"
     CDS             complement(980..>2125)
                     /locus_tag="VK429_04070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011389505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91015.1"
                     /translation="GEHGGHVVAAGPPEEIVRCEASLTGRYLAGKKEIPVPRKRRRFN
                     GHALRLEGCRANNLKGIDVTIPLGVITCITGVSGSGKSTLILDTLYKALAQKLTGGRE
                     RPGEHRSLSGLEQVDKVIHIDQSPIGRTPRSNPATYSGVFTPIRDLFAMLPESKSRGY
                     RPGRYSFNVKGGRCEACEGDGIIKIEMHFMPDVYVTCEECRGRRYNRETLEVAYKGKS
                     VADVLEMTVDQALAFLSPIPPIRHKLETLSRVGLGYIRLGQSATTLSGGEAQRVKLAR
                     ELSRRATGKTVYLLDEPTTGLHFDDISKLLSVLHLFADAGNTVIIIEHNLDVIKSADH
                     IIDLGPEGGDAGGEIVACGTPEEVAGNPRSFTGHFLRRVLHLPAVAS"
BASE COUNT          350 a          712 c          724 g          339 t
ORIGIN      
        1 ggcgcagccg aaggaggagt cccggaggcg cagcgacttc cgggaccgca agaaccggat
       61 tgatcgccca tcctccggat gtcatcgtgg aaatcgggag cgtacgacgg ggaggagggg
      121 gatcatgcac ccgatggatt actcgcggat cgagaaagcg atcctttttc tcgatgaggg
      181 cttccaaaga cagccgagcc tgaaggaagt ggcccggaag gtgggcctca gcgagtacca
      241 cttccaccgc ctcttcacga ggtgggccgg aatcagcccg aaacggttcc tccagtttct
      301 gaccgcggag tacgccaggg gattgctcaa ggagtcgccg aacgtgctcg aggccgcctg
      361 ggaggccgga ctttcgggat cggggcgcct tcacgacctg atcgtaaacg tctacgccgt
      421 caccccgggg gaattgaaag aggagggagc gggccttacg atccattacg gagtccaccg
      481 gggccccttc ggagacttcc tgctcgcgat caccggcaag ggaatctgcg cgttgtcgtt
      541 cctggggcag ggcggcgccc ggggagcggt ggaagcgctc cggaaggagt gggcgggatc
      601 gaggctcgtc gaagacccgg ataccacgaa aaccgtggcg aaccgcatct tcgcccccac
      661 gcggcaagcg ggcaccccgc cgctgaacgt ggtcgtcaag ggaaccaact tccagatcaa
      721 ggtttgggaa gccctcctcc ggatcccggc gggaagcgtc gccgcctacg aggacgtcgc
      781 cgcccggatc ggcacgccga aagcggtgcg cgccgtcggg aacgccgtgg gacggaaccc
      841 cgtcgcgttc ctcatcccgt gccaccgggt cctccggaaa acgggggcct tcgggggata
      901 cggcgggggt gtggcacgga agaaggcgat cctcgcctgg gagtgggcca ggatccgggg
      961 gccggggaag gaacgctgat cagcttgcga cggcgggcag gtgcaggacc cgacgcagga
     1021 agtggccggt gaaggagcgc gggttccccg ccacctcctc gggggtgccg cacgcgacga
     1081 tctctcctcc ggcgtcgccc ccttccggcc ccagatcgat gatgtggtcc gccgatttga
     1141 tcacgtccag gttgtgctcg atgatgatca ccgtgttccc cgcgtccgcg aacaggtgga
     1201 ggacggagag cagtttcgag atgtcgtcga agtggagccc cgtcgtcggc tcgtcgagca
     1261 ggtagaccgt cttccccgtc gcccggcgcg acagctcccg cgcgagcttc acccgctgcg
     1321 cctccccgcc cgaaagcgtg gtcgcggact gacccagccg gatgtacccc aggccgacgc
     1381 gcgacagcgt ctccagcttg tgccggatcg gggggatcgg ggagaggaac gcgagcgcct
     1441 ggtcgaccgt catctccagg acgtcggcga cgctcttccc cttgtaggcg acctcgagcg
     1501 tctcccggtt gtaccgccgc ccccggcact cctcgcacgt gacgtagacg tccggcatga
     1561 agtgcatctc gatctttatg atcccgtccc cctcgcacgc ctcgcaccgc ccccccttca
     1621 cgttgaagga gtagcgcccg ggacggtacc cgcgggattt gctctcgggg agcatcgcga
     1681 acaggtcccg gatcggcgtg aagacgccgg agtaggtcgc cgggttcgat cgcggggtgc
     1741 gcccgatggg ggactggtcg atgtggatca ccttgtccac ctgttccagc cccgacagcg
     1801 accggtgctc cccgggccgc tcccggccgc cggtgagctt ctgcgccagc gccttgtaga
     1861 gggtgtcgag gatcagcgtc gacttcccgg agcccgagac gccggtgatg cacgtgatga
     1921 cccccaacgg aatcgtcacg tcgatcccct tcaggttgtt cgccctgcac ccctcgagtc
     1981 gcagcgcgtg cccgttgaag cggcgccgct tccgcggtac ggggatctcc ttcttcccgg
     2041 cgaggtaccg ccccgtgagg gacgcctcgc accggacaat ctcctccggg gggcccgccg
     2101 ccaccacgtg cccaccgtgc tcccc
//
LOCUS       DATGYW010000291         2022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_401378, whole genome shotgun sequence.
ACCESSION   DATGYW010000291 DATGYW010000000
VERSION     DATGYW010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401378"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VK429_04075"
     CDS             <1..219
                     /locus_tag="VK429_04075"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011418613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HLN91016.1"
                     /translation="ARFCGKPEALARALEKISGESRQVPMQASPATAHMFIMSPLTGG
                     GLMSLFSTHPPVEKRIERLMAMRGQNLR"
     gene            216..>2022
                     /locus_tag="VK429_04080"
     CDS             216..>2022
                     /locus_tag="VK429_04080"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HLN91017.1"
                     /translation="MMEISFYREKLSESGHRMLNASIEESQRRHHYYLGLEHLFIAFA
                     DQEKTMFQELMAAIGLNVEAVLFSLAEHLNISRQYLGVGLKVPPATKQVFRVAWETAQ
                     RNRRTQIDASDLFLGIFHEVHSIPARILKNYGVDPAVALSRFAAQLRTREEKVEEFRK
                     RYELPANLRTFAVNLNLLAREGKIPPIIGRDAEIDRILEYLCHKDRSNSVMILGDPGV
                     GKTAVVEGLAMRLEYEPHRVPERLRGHHVVNLQMNTVVAGTVFRGMFEDRIEKVIAEV
                     KERKDLILFIDEAHTLVGAGSAMGVPSDAANIFKSALARGEVQMIGATTVTEYKEILQ
                     EDEALSRRFRVVKIGEPTLDETREILMGLKPRLEANYGVEVLDEAIDFALSMSDRYAR
                     SLRLPDKVINWLDTACVRVEIRGDVEKTVTGKDVLDVIATETKNPPDILLRDVGERFR
                     DIEERISRRLVGQKEAIASVARSLRMNKGPLKANIYRPDGVLLFLGPTGVGKTEMARA
                     LAEYLFGDERQMIRVDMSEYRDGALAVDKLIGMPRGIVGSERGGILTNQVKDNPYSVV
                     LLDEIEKADTYVHNLFLQAFDEGWLTEGRGKRVYLS"
BASE COUNT          376 a          648 c          687 g          311 t
ORIGIN      
        1 gcccgcttct gcgggaaacc cgaggcgctg gcgcgggccc tcgaaaagat ctcgggtgaa
       61 tcccgtcagg tgccgatgca ggcgtcaccc gcgacggccc acatgttcat catgagcccg
      121 ctgaccggcg gcggcctcat gagcctgttc agcacccacc cgccggtgga gaagcggatc
      181 gagcgcctga tggcgatgcg ggggcaaaac cttcgatgat ggaaatctcg ttctaccggg
      241 aaaagctctc cgagtccggg caccggatgc tgaacgcctc gatcgaggag tcgcagcgcc
      301 gccatcacta ctatctcgga ctcgagcacc tgttcatcgc cttcgccgac caggagaaga
      361 cgatgttcca ggagcttatg gcggcgatcg ggctgaacgt cgaggccgtc ctcttttcac
      421 tcgccgagca cctgaacata tcccggcagt acctgggggt cggcctgaag gtccccccgg
      481 cgaccaagca ggtcttccgc gtcgcgtggg agacggcgca gcggaaccgc cgcacacaga
      541 tcgacgcctc cgacctgttc ctcggcatct tccacgaggt ccactccatc ccggcgcgga
      601 tcctgaaaaa ttacggcgtc gacccggccg tcgccctctc ccggttcgcc gcgcagctta
      661 ggacacggga ggagaaggtc gaggagttcc ggaagaggta cgagcttccg gcgaacctcc
      721 ggaccttcgc cgtcaacctg aacctcctcg cccgggaagg gaagatcccc ccgatcatcg
      781 ggcgggacgc ggagatcgac cggatcctcg aatacctctg ccacaaggac cggtccaact
      841 cggtgatgat cctcggggac ccgggggtcg ggaagaccgc cgtggtcgag gggctcgcga
      901 tgcgtctcga gtacgagcct caccgggtgc cggagcggct ccgggggcac cacgtggtca
      961 acctccagat gaacacggtc gttgcgggga ccgtcttccg cgggatgttc gaggaccgga
     1021 tcgagaaggt gatcgccgag gtcaaggagc ggaaggacct tatcctcttc atcgacgagg
     1081 cgcacaccct ggtcggggcg ggctccgcca tgggcgtccc ctccgacgcg gcgaacatct
     1141 tcaagtcggc cctggcccgg ggcgaggtcc agatgatcgg ggccacgacg gtcacggagt
     1201 acaaggagat cctccaggag gacgaggcgc tctcccggcg gttccgggtg gtgaagatcg
     1261 gggagccgac cctcgatgag acgcgggaga tcctcatggg cctcaagccc cgcctcgagg
     1321 cgaactacgg ggtggaggtc ctggacgagg cgatcgactt cgccctctcc atgtccgacc
     1381 ggtacgcccg ttccctgcgc ctgccggaca aggtgatcaa ctggctcgac acggcgtgcg
     1441 tgcgcgtcga gatccggggc gacgtggaga agaccgtcac ggggaaggac gtgctcgacg
     1501 tgatcgcgac cgagacgaag aacccgccgg acatcctcct ccgggacgtg ggggagcggt
     1561 tccgggacat cgaggagcgg atctcccgcc ggctggtggg gcagaaggag gcgatcgcct
     1621 cggtggcaag gtcgctgcgg atgaacaagg gcccactcaa ggcgaacatc tatcggccgg
     1681 acggcgtgct gctcttcctg ggtcccaccg gcgtaggcaa gaccgagatg gccagggcgc
     1741 tggcggagta cctcttcgga gacgaacggc agatgatccg cgtcgacatg tccgagtacc
     1801 gcgatggcgc gctcgctgtc gacaaactga tcgggatgcc gcgcgggatc gtcggctccg
     1861 aacgcggggg gatcctgacg aaccaggtca aggacaaccc gtactccgtg gtcctgctcg
     1921 acgagatcga gaaggccgac acgtacgtcc acaacctctt cctccaggcg ttcgacgagg
     1981 ggtggctgac cgaagggcga gggaagcgcg tctatctcag cg
//
LOCUS       DATGYW010000292         2049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_176100, whole genome shotgun sequence.
ACCESSION   DATGYW010000292 DATGYW010000000
VERSION     DATGYW010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176100"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..595
                     /locus_tag="VK429_04085"
     CDS             <1..595
                     /locus_tag="VK429_04085"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012966275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HLN91018.1"
                     /translation="GGPQNTYRSLQWLNMNWAFSYSATGYMDYGMLGALQVDPYGNIN
                     STYLGGTFTSPTRRFAGSGGGNQVASHCWKTIIVIKHEGRRFVPKVDFITSPGYLDGP
                     GARERTGLPRDTGPHRVVTSKALFGFDKESRKMTLLSVLRGIPVEEVVKDMAFRPLLA
                     PEIGEIPPPTDDELRVLREEIDPARFIIRGEKMTAIA"
     gene            622..1941
                     /gene="miaB"
                     /locus_tag="VK429_04090"
     CDS             622..1941
                     /gene="miaB"
                     /locus_tag="VK429_04090"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HLN91019.1"
                     /translation="MRRSVFIKTFGCQMNAVDSARMLSLMSSADYLAAPTLEEADLVL
                     LNTCSIREKADQKIYSDLGTLRRWKLRRPGRLVGVGGCLAQQDGEELRKRAPHVDIVF
                     GTHNIASLPEMVRRAERRLPTLALGMGEGMTHWDVVPHLPDGAVSAMVAIMQGCDNFC
                     AYCVVPLVRGREVSRPAGDILSEVRALAGRGVMEIVLLGQNVNSYGKKEGEIPFPELL
                     RRISAIERIRRIRFITSHPRDLDDRTIRLFEEMDTLCPHVHLPLQSGADRILYAMGRG
                     YTRGEYLAKIEALRQARPGIAFSSDFIVGFPGETEDDFRETLSVMEEVRFDSSFSFRF
                     SSRPGTRAAEMKENVDPQEAAERLRRLQERQAIHTRERLMAQVGREVAVLVDGTSARD
                     PGMRCGRTACNKTVNFTPGNFDGAIRSILVTGAGTHSLVGEERSSDA"
BASE COUNT          366 a          659 c          662 g          362 t
ORIGIN      
        1 gggggggccg cagaacacgt accggtcgct gcagtggctc aacatgaact gggccttctc
       61 gtactccgct acgggctata tggattacgg aatgctcggc gcgctccagg tcgacccgta
      121 cggaaacatc aactcgacct acctcggcgg cacgtttacc agcccgacgc gcagattcgc
      181 cgggagcgga ggcggaaacc aggtggcctc gcactgctgg aagacgatca tcgtcatcaa
      241 gcacgaaggc cgccgcttcg tccccaaggt cgatttcatc acctcccccg ggtacctcga
      301 cggcccggga gcccgcgaga ggaccgggct gccccgcgat acgggtcccc atcgcgtggt
      361 cacctcgaag gcgctgttcg gattcgacaa ggagtcccgg aagatgaccc tcctctcggt
      421 cctccggggg attccggtcg aggaggtcgt caaagatatg gcgttccgtc ctcttctggc
      481 tcccgagatc ggcgagatcc cgccgccgac ggacgacgaa cttcgcgtgc tgcgggagga
      541 gatcgacccc gcccgcttca tcatccgcgg agagaagatg accgcgatcg cctgaccgcg
      601 cggatgctat aatcggaatc catgcggcga agtgtcttca tcaagacgtt cggatgccag
      661 atgaacgcgg tggactcggc gaggatgctc tcgctcatgt cctcggccga ttaccttgcc
      721 gcccccaccc tcgaggaggc ggacctcgtc ctcctcaaca cctgcagcat tcgcgagaaa
      781 gccgaccaga agatctatag cgatctcggt acgttgcgcc gctggaagct gcgccgcccg
      841 ggacggctcg tcggagtcgg gggttgtctc gcccagcagg acggggagga gctccggaag
      901 cgggcccccc acgtcgacat cgtattcgga acccacaata tcgcgagcct tcccgaaatg
      961 gtccggagag cggaacgccg cctcccgacg ctggccctcg ggatgggtga ggggatgacg
     1021 cactgggacg tcgttccgca cctgcctgac ggcgcggtat cggcaatggt cgccatcatg
     1081 cagggatgcg acaatttctg cgcctactgc gtcgtccccc tggttcgggg gcgtgaggtg
     1141 agccggccgg ccggggatat cctctccgag gtccgcgccc tcgccgggcg cggggtgatg
     1201 gaaatcgtcc tgctgggtca gaacgtcaac tcctacggga agaaagaagg ggagatcccg
     1261 ttcccggaac ttctgcggag gatttccgcg atcgagcgga tccggcggat ccggttcatt
     1321 acctcgcatc cgagggacct ggatgaccgg acgatccggc tcttcgagga gatggatacc
     1381 ctttgcccgc acgtccatct ccccctgcaa tccggcgctg accgtattct ttacgccatg
     1441 gggcggggat acacgcgggg agagtatctc gccaagatcg aagcattgcg gcaagcccgc
     1501 ccgggcatcg ctttctcctc cgacttcatc gtcggcttcc cgggggagac ggaggacgat
     1561 ttccgggaga ccctttccgt catggaggag gtccgcttcg actcctcgtt ctcgttccgt
     1621 ttttcttccc gcccggggac ccgggcggcg gagatgaagg agaatgtcga cccgcaagag
     1681 gcggccgaac gcctgcggcg cctgcaggag cgtcaggcga ttcacacccg ggagcgcctc
     1741 atggcgcagg tcggtcggga ggtcgcggtt ctcgtcgacg gaacgagcgc gagagaccct
     1801 gggatgcgtt gcggccgaac cgcctgcaac aagacggtga acttcactcc cggaaacttt
     1861 gacggggcga tccggtccat cctcgttacc ggcgcgggga cccactccct cgtcggggaa
     1921 gagaggtcct ccgatgccta aagaggttac agtggccggc gtcgcggtcg accccgtgac
     1981 gaaatcaccg atcgtgattc ttcgggaacc agagtccggc aacgttgtcc cgatctggat
     2041 cggcctgct
//
LOCUS       DATGYW010000293         1504 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_77074, whole genome shotgun sequence.
ACCESSION   DATGYW010000293 DATGYW010000000
VERSION     DATGYW010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77074"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..1286)
                     /gene="nuoH"
                     /locus_tag="VK429_04095"
     CDS             complement(189..1286)
                     /gene="nuoH"
                     /locus_tag="VK429_04095"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014856697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HLN91020.1"
                     /translation="MNSPLFDIAVAVARIAVFFAFCFGLVVVMTWVERKGAAYIQDRR
                     GPNRADIFGIRAWGLFHPLADALKFLFKEDFIPDNAHRLFYQLAPMFSLAPAILAIAI
                     IPFGPDVTVMGRTIALQIADLNVGILYLFAVTGMTVYGVVLAGWASGSKYPLLGGLRS
                     SAQMLSYEVSMGLSLIGIFMVFESVRLSQIVAGQGGLLFGALPKWGIFVQPLGFILFL
                     VAQYAEANRTPFDLPEGESELVAGYHTEYGSFKFSMFMMAEYLHMVVGAAVVATLFFG
                     GWQFPYLGDAGFLFPGGSAVAVPPAAVLLLRIGAFVSKVLFFAWLYVWVRWTIPRFRY
                     DQVMRLGWKVMLPLSLLNIFATGLTLLLLKK"
     gene            complement(1283..>1504)
                     /locus_tag="VK429_04100"
     CDS             complement(1283..>1504)
                     /locus_tag="VK429_04100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91021.1"
                     /translation="NHAGRVQRFRPGFPARGKARNPVEILVSLGNRLGAGWTFAGEAS
                     VFGALAESEAPFAGMSYDSIGMFGQEIKG"
BASE COUNT          309 a          524 c          458 g          213 t
ORIGIN      
        1 ctcccgccgg acctcggggt actcgatcgt cttgatcccc tcctggcgga cgatgttgga
       61 aaggaggtgc cccatcgtca ccccgagccc cttcacgatc tccacgaggt agagcgcctc
      121 cgggaacgac atctcccgcg gccgcgccac ttttttcact ccgatcgtca tcgccccgtt
      181 ttccgcctct actttttcag aaggagcagg gtcagccccg tcgcgaagat gttcagcagc
      241 gagaggggaa gcatgacctt ccaccccagc cgcatcacct ggtcgtaccg gaaccgggga
      301 atcgtccacc ggacccagac gtatagccac gcgaagaaca ggaccttcga gacgaacgcc
      361 ccgatccgaa ggagcaggac ggccgcgggc ggcacggcca ccgcggaacc gccggggaag
      421 aggaaccccg cgtcgccaag gtacgggaac tgccaccccc cgaagaagag ggtcgccacg
      481 acggccgcgc ccaccaccat gtgcaggtat tccgccatca tgaacatcga gaacttgaag
      541 gaaccgtact cggtgtggta tccggcgacc agttccgact ccccttcggg aaggtcgaag
      601 ggggtccggt tcgcctccgc gtactgggcc acgaggaaga ggatgaaccc gagcggctgg
      661 acgaaaatgc cccacttcgg cagagcgccg aagaggagcc ccccctgccc tgccacgatc
      721 tgggacaatc ggacggactc gaacaccatg aagatcccga tgagggagag ccccatggag
      781 acttcgtacg acagcatctg ggccgacgac cgcagccccc cgaggagcgg gtacttgctc
      841 ccgctggccc acccggcgag aacgacgccg tacacggtca tccccgtgac ggcgaacagg
      901 tagaggatgc cgacattgag atccgcgatc tgcagcgcga tcgtacgccc catcacggtg
      961 acgtcgggtc cgaacgggat gatggcgatc gccaggatcg ccggcgccag cgagaacatc
     1021 ggcgccaact ggtagaagag ccgatgggcg ttgtcgggga tgaaatcctc cttgaagagg
     1081 aacttcaacg cgtcggccag cgggtggaag agcccccacg cccggatgcc gaaaatatcg
     1141 gcccggttgg gcccgcggcg gtcctggata tacgccgctc ccttccgctc cacccaggtc
     1201 atcacgacga ccaggccgaa gcagaacgcg aagaagaccg cgatccgcgc gaccgccacc
     1261 gcgatgtcga aaagggggct attcatccct tgatctcctg cccgaacatg ccgatcgaat
     1321 cgtagctcat cccggcgaag ggcgcctcgg attccgccag cgccccgaag accgacgcct
     1381 cgcctgcgaa cgtccatccg gcccccagcc ggttccccag cgaaacgagg atctcgaccg
     1441 ggttcctcgc cttcccccgc gccgggaatc cgggccggaa ccgctgcaca cggccggcgt
     1501 ggtt
//
LOCUS       DATGYW010000294         1810 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_240905, whole genome shotgun sequence.
ACCESSION   DATGYW010000294 DATGYW010000000
VERSION     DATGYW010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240905"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..358)
                     /locus_tag="VK429_04105"
     CDS             complement(<1..358)
                     /locus_tag="VK429_04105"
                     /inference="COORDINATES: protein motif:HMM:NF013293.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HLN91022.1"
                     /translation="MVVCGAMGRMGRAILGILKEGPHGFSLTGAVEAAGHPLLTQDAF
                     EAAGAGRAGVPVTDDFAKAVAASDVAIDFTAADSSARNAGAAAAAGKPIVIGSTGLGP
                     THMERIRNAAAKVAIVQ"
     gene            complement(379..1251)
                     /gene="dapA"
                     /locus_tag="VK429_04110"
     CDS             complement(379..1251)
                     /gene="dapA"
                     /locus_tag="VK429_04110"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012625562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HLN91023.1"
                     /translation="MFHGAIVATITPFRNGKLDASALKRLVEFQIRNGTDGIVPCGTT
                     GESATLAYEEHERVIDLVLDAAGGRVPVIAGTGSNNTKEAVLLTRYAKKAGANAALVI
                     TPYYNKPTQAGLIAHFREVAASADIPLILYNVPSRTGVNMTAETVARLSEVKNIVGVK
                     EASGNIAQVCDILKMTPRTFCVLSGDDGLYFPMLALGAKGVISVVSNVAPREMADLYD
                     AFSLGEVARAREIHFLLWPLMKALFIETNPIPAKTALAMMGKIREEFRLPLCGMSDAN
                     RKVLGKVLSGLKIV"
     gene            complement(1269..>1810)
                     /gene="dapF"
                     /locus_tag="VK429_04115"
     CDS             complement(1269..>1810)
                     /gene="dapF"
                     /locus_tag="VK429_04115"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HLN91024.1"
                     /translation="EMSFETIAGILHASVRGRRVKLQMTRPRGLAVGRSLTLAGKKFS
                     YSFLDTGVPHAVLFVPDVTRADVVGVGRGIRRHRAFAPRGTNVNFVQPVGDALLVRTY
                     ERGVEGETLACGTGAVASGILAAVRGLVSAPVTVRTSGGETLLIHFDPKRKDFGEVFL
                     EGDTSWSCDGKIFEEAYRY"
BASE COUNT          285 a          661 c          573 g          291 t
ORIGIN      
        1 attggacgat cgccaccttc gccgccgcgt tccggatccg ctccatatgg gtcggcccga
       61 gcccggtgct cccgatgacg atcggctttc cggcggcggc ggccgccccg gcgttgcgcg
      121 ccgaagagtc ggcggccgtg aagtcgatcg ccacgtccga tgccgcgacc gccttcgcga
      181 agtcgtcggt gacgggaacc cccgcccttc cggccccggc cgcctcgaag gcgtcctgtg
      241 tgagcagggg gtgcccagcc gcctcgaccg ccccggtgag ggaaaacccg tggggaccct
      301 ccttcaggat gccgaggatc gccctcccca tccgtcccat cgcgccacag acgaccacgc
      361 cgggcaaggg ccgcccccct acacgatctt caggccggag aggaccttcc cgaggacctt
      421 ccggttggca tcggacatcc cgcacagcgg aagccggaac tcttcgcgga tcttccccat
      481 catcgcaagc gccgtcttgg cggggatcgg gttcgtctcg atgaagagcg ccttcatcag
      541 gggccacagg aggaagtgga tctcccgcgc tcgcgccacc tcccccaggg agaaggcgtc
      601 gtagaggtcg gccatctccc tcggggccac gttggagacg acggagatga cccccttggc
      661 gccgagggcg agcatcggga agtagagccc gtcgtctccg gacagcacgc agaaggtcct
      721 cggggtcatc ttcaggatgt cgcagacctg cgcgatgttc ccggaggcct ccttcacccc
      781 gacgatgttt ttcacctccg agaggcgcgc cacggtctcc gccgtcatgt tgaccccggt
      841 gcgggacggg acgttgtaga ggatgagagg gatgtccgcg gaggcggcca cctcccggaa
      901 gtgcgcgatc agccccgcct gggtcggctt gttgtaatac ggggtgatga cgagcgccgc
      961 gttcgccccc gccttcttcg cgtagcgggt caacaggacg gcttccttcg tattgttcga
     1021 gcccgttccc gcgatgacgg gcacccggcc ccccgccgca tcgagcacca ggtcgatcac
     1081 ccgctcgtgc tcttcgtagg cgagcgtcgc ggactccccg gtcgttccgc acggaacgat
     1141 cccgtcggtc ccgttccgga tctggaactc caccagtctt ttcagcgcgg acgcgtccag
     1201 cttgccgttc cggaacggag tgatggttgc gacgatggca ccgtggaaca tacgctcctc
     1261 cccccttttc agtagcgata cgcctcttcg aagatctttc cgtcacacga ccaggaggtg
     1321 tccccctcga gaaagacctc cccgaaatcc ttccgcttcg ggtcgaaatg gatgaggagc
     1381 gtctcgccgc cgctggtccg cacggtcacc ggcgccgaca ccagaccgcg gaccgccgcc
     1441 aggatcccgc tggcgaccgc ccccgttccg caggccagcg tctccccctc gaccccccgc
     1501 tcgtaggtgc gcaccagcag ggcgtcgccg accggctgca cgaaatttac gttggtcccc
     1561 cggggcgcaa acgcccggtg ccgccggatc ccgcgcccga ccccgacgac gtccgcccgg
     1621 gtgacgtcgg ggacgaacag gacggcgtgg ggaacgccgg tgtcgagaaa cgagtaggag
     1681 aacttcttcc ccgccagcgt cagcgaccgg ccgaccgcca acccgcgggg acgagtcatc
     1741 tgcagcttca ctcggcggcc tcgcaccgag gcgtggagga tccccgcgat cgtctcgaag
     1801 gacatctccc
//
LOCUS       DATGYW010000295         1735 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_341118, whole genome shotgun sequence.
ACCESSION   DATGYW010000295 DATGYW010000000
VERSION     DATGYW010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1735
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_341118"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..792
                     /locus_tag="VK429_04120"
     CDS             <1..792
                     /locus_tag="VK429_04120"
                     /inference="COORDINATES: protein motif:HMM:TIGR00231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HLN91025.1"
                     /translation="KDADLPRIAVVGRPNVGKSTLVNTLAGFERVIASEVPGTTRDAI
                     DVKVERDGRKYLLIDTAGIRAKRKTEGAVEIFSVMKSLDSIKRCDLAILLIDGPGGLT
                     HQDRQVLRYILDEERAVVVAANKSDAWTTEEARRKGLRAIAEGLEYASFAPVVPTVAT
                     SGKGFQQLFRKIEEASANFRLRVPTGVLNRMAQSFLYTVPIPSPTGRNRAFYMTQVGV
                     APPSFAVFVKNRKGIPDSFTRYLQNKIRDRFGFEGSPVRIVYRER"
     gene            789..1682
                     /locus_tag="VK429_04125"
     CDS             789..1682
                     /locus_tag="VK429_04125"
                     /inference="COORDINATES: protein motif:HMM:NF015587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HLN91026.1"
                     /translation="MIRRASKAFRAVTEGAAVFFRNHGSVYSAAIAFNILLSAIPVLF
                     LAFAATGWIIGKSELPFAQLKDILSSTFPYGARVLIPNLRKLMEAGGAFGILGTVLLL
                     VASFSATDAVHTALSVMIRSKRQKRIWRSLAFHVVLVVVLILLTASAIIVPPLWDGLF
                     YLTKGMSAQADYAFRGIMTLVADIIMVGILLLGSVLSYRYLSPGKIRLRNAFVGTVIF
                     LALLQGIRYGFIFYVRKFSKLNLLYGSLFSIICFIIVAYLFSVAYLYGASVIGVLERM
                     GREGSIPARKEGEPDATAGGD"
BASE COUNT          298 a          539 c          566 g          332 t
ORIGIN      
        1 aaggacgccg accttccgcg gatcgccgtg gtggggcggc cgaacgtcgg aaagtcgacg
       61 ctcgtcaaca cgctggcggg gttcgagcgg gtcatcgcct cggaggtccc gggaaccacg
      121 cgcgacgcga tcgacgtgaa ggtggagcgg gacggaagga agtaccttct gatcgacacc
      181 gcggggatcc gcgcgaagag gaagaccgaa ggggcggttg aaatcttctc cgtgatgaag
      241 agcctcgact cgatcaagcg gtgcgacctc gcgatcctcc tgatcgacgg cccggggggg
      301 ctcacccacc aggaccggca ggtcctgcgc tacatcctcg acgaggagcg cgcggtggtc
      361 gtcgccgcga acaaatccga cgcgtggacc acggaagagg cgcgccggaa ggggctgcgc
      421 gcgatcgccg aagggctcga gtacgcctcc ttcgcgcccg tcgtccccac ggtggccact
      481 tcgggaaagg ggttccagca gctcttccgg aagatcgagg aggccagcgc gaacttccgc
      541 ctccgcgtcc cgaccggcgt gctgaaccgc atggcgcagt cgttcctgta caccgtcccg
      601 atcccgtccc ccacggggag gaaccgcgcg ttctacatga cgcaggtcgg ggttgcgccg
      661 ccctccttcg ccgtcttcgt gaagaaccgc aaggggatcc cggactcgtt cacccgctac
      721 ctgcagaaca agatccgcga ccgcttcgga ttcgaggggt cgcccgtccg catcgtctac
      781 cgggagcgat gatccgtcgg gcgtcaaagg cgttccgggc cgtcacggag ggggcggcgg
      841 tcttcttccg gaaccatggt tcggtctaca gcgccgccat cgcgttcaac atccttctct
      901 ccgcgatccc ggtcctgttc ctcgccttcg cggccaccgg ctggatcatc gggaagagcg
      961 aacttccgtt cgcgcagctg aaggatatct tgagcagcac attcccttat ggcgcgcggg
     1021 tgctgattcc gaaccttcgg aaattgatgg aggcgggggg cgccttcggg attctcggaa
     1081 cggtcctcct cctggtcgcc tccttctccg cgacggacgc ggtccacacg gcgctttcgg
     1141 tgatgataag gagcaagcgc cagaaacgga tctggcgctc cctcgcgttc catgtcgtcc
     1201 tcgtggtcgt cctgatcctg ctgaccgcgt ctgcgatcat cgtgccgccc ctttgggacg
     1261 ggctcttcta cctcacgaag gggatgtccg cgcaggcgga ctacgcgttc cgtggcatca
     1321 tgacactggt cgcggatata atcatggtgg gcattctgtt gctggggagc gtcctgagct
     1381 accgatacct ctccccggga aagatccggc ttcgcaacgc gttcgtgggg accgtgatct
     1441 tcctcgccct gcttcaggga atcaggtacg gattcatctt ttacgtaagg aaattcagca
     1501 agttgaatct tctttacggt tccttgttca gcatcatttg ttttataatc gttgcctacc
     1561 tattctctgt ggcgtatctg tacggggcca gcgtcatcgg ggtgctggag cgcatgggca
     1621 gggaggggtc catcccggcg aggaaggaag gcgaaccgga tgcgacggct ggcggcgatt
     1681 gacatcggga cgaacacgat ccggatgctc gtcgcggaac gcggcggaag gcgga
//
LOCUS       DATGYW010000296         2082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_20012, whole genome shotgun sequence.
ACCESSION   DATGYW010000296 DATGYW010000000
VERSION     DATGYW010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20012"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            237..1319
                     /locus_tag="VK429_04130"
     CDS             237..1319
                     /locus_tag="VK429_04130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN91027.1"
                     /translation="MGAEKGGTGAKPKGEPIRARIGVISIITGQGAAYGEAITNGIKL
                     ARDEVNAKGDVLIDLRIEDSSGKQEQALAAAQKLINSEKVVAIIGPTLSNEMMVAGPE
                     ADASGVPIMGTSTTAKGITRIGKFVFRNSLPESQAIPASVGKAVKKYNIKKVALLYGN
                     DDVFTKSGFDTMKEVAEKLKLNIVTIEEFQKGQADYKAQLTKIASLKPDAVLCSALYN
                     EGGVILAQARKMGLKVPFVGGNGFNSPKVIEIAKDAAEGLIVATPWFGEKNDPKVKAF
                     VAKYEKAYGKKPDQFAAQAYDALHIMANALKAAGSADRSKLRDALAATKNFQGVLGKF
                     SFDAERDVVMEPTVLIVKGGKFAIFN"
     gene            1345..>2082
                     /locus_tag="VK429_04135"
     CDS             1345..>2082
                     /locus_tag="VK429_04135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009335816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN91028.1"
                     /translation="MFLEQLINGITLGSIYAIVALGYTLVFGVLDIINMAHGEIFMFG
                     AFVGMLIVSKAGAPLPVAFLGAIVVTAAMGLLLERFALRPLRGRPGASHLASLISTIG
                     VSILLENVAHKIFGSGNHLFETPFAEISFTIGPVTVYLVQVVILLISLLLMAGLALWL
                     SRTRAGKALRATAENLETAGLLGVDTNRMITATVVIASAMGGVAGVLVGMAFNYINNQ
                     IGLSMGLKGLAIIIFGGMGSVYGAMAGG"
BASE COUNT          386 a          644 c          704 g          348 t
ORIGIN      
        1 aaccggcgaa cgacatgggc ctacggcaga gagccgaggg cctttgtcgt tcgcctccca
       61 ccgcccgatg tcgatccgcc ccgccgggtc gcctctcttc ggcggcccgc ttccttgacc
      121 caccccccac cggcgaatag aattgcaaat caatcttgtt ccaggggggc tttcccatga
      181 aacgcaacgt gcctctgatc gcgtccgtcg cgtgcgcact cttcgccttc gtgttcatgg
      241 gggcggaaaa ggggggaacg ggtgcgaagc cgaagggtga accgatccgg gcgaggatcg
      301 gcgtcatctc catcatcacg ggacagggag ccgcgtacgg cgaggcgatc acgaacggca
      361 tcaagctcgc acgggacgag gtcaacgcga agggcgatgt cctcatcgac ctgaggatcg
      421 aggactcctc ggggaagcag gaacaggcgc tggcggcggc gcagaagctc atcaactcgg
      481 agaaggtcgt ggcgatcatc ggtcccacgc tttccaacga gatgatggtc gcgggccccg
      541 aggccgacgc gagcggcgtg ccgatcatgg ggacctccac cacggcgaag gggatcaccc
      601 ggatcgggaa gttcgtcttc cggaactcgc tgcccgagtc ccaggcgatc ccggcatccg
      661 tcggcaaagc ggtgaagaag tacaacatca agaaggtcgc cctgctctac gggaacgacg
      721 acgtcttcac gaagtccggc ttcgacacga tgaaagaggt cgccgaaaag ctcaaactga
      781 acatcgtgac gatcgaggag ttccagaagg ggcaggcgga ctacaaggcg cagttgacca
      841 agatcgcctc cctcaagcca gacgcggttc tctgctccgc cctgtacaac gaggggggcg
      901 tcatcctcgc gcaggcgcgg aagatggggc tgaaggtccc gttcgtcggc gggaacggct
      961 tcaactcacc gaaggtcatc gagatcgcca aggacgcggc cgaggggttg atcgtggcca
     1021 ccccctggtt cggggaaaag aacgacccga aggtgaaggc gttcgtggcg aagtacgaga
     1081 aggcgtacgg gaagaaaccg gaccagttcg cggcccaggc gtacgacgcc ctccacataa
     1141 tggcgaacgc actgaaagcg gcggggtcgg cggaccggtc gaagctgcgc gacgccctcg
     1201 cggcgacgaa gaatttccag ggggtcctcg gcaagttctc cttcgacgcg gagcgcgacg
     1261 tggtcatgga gcccaccgtc ctgatcgtca agggcggaaa gttcgcgatc ttcaactgat
     1321 ccggcggtag cggcggaggc gggcgtgttc ctcgagcagt tgatcaacgg catcaccctg
     1381 ggcagcatct acgccatcgt ggcgctgggg tacacgctcg tcttcggcgt gctcgacatc
     1441 atcaacatgg cccatgggga gatcttcatg ttcggggcgt tcgtcggcat gctcatcgtg
     1501 agcaaggcgg gcgccccgct tcccgtggcg tttcttgggg ccatcgtcgt caccgcggcg
     1561 atggggctgc tgctggagcg gttcgccctg cggccgctgc gaggccggcc cggggcctcg
     1621 catcttgcct ccctgatcag cacgatcggc gtctccatcc ttctggagaa cgtggcgcac
     1681 aagatcttcg ggtccgggaa ccacctgttc gagaccccct tcgcggagat cagtttcacg
     1741 atcggcccgg tgacggtcta cctcgtccag gtggtgatcc tgctcatctc cctgctcctc
     1801 atggcggggc tcgctctctg gctgtcgcgc acgcgcgccg ggaaggcgct gcgcgccacc
     1861 gcggagaatc tggagacggc gggactgctc ggggtggaca cgaaccggat gatcaccgcc
     1921 acggtcgtca tcgcctcggc gatgggaggg gtcgccgggg tcctggtggg gatggcgttc
     1981 aactacatca acaaccagat cgggctctcc atggggctca aggggctggc gatcatcatc
     2041 ttcggcggca tggggagcgt ctacggcgcc atggcggggg gc
//
LOCUS       DATGYW010000297         3871 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_401683, whole genome shotgun sequence.
ACCESSION   DATGYW010000297 DATGYW010000000
VERSION     DATGYW010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3871
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401683"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..892
                     /gene="lpxC"
                     /locus_tag="VK429_04140"
     CDS             <1..892
                     /gene="lpxC"
                     /locus_tag="VK429_04140"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: protein motif:HMM:TIGR00325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HLN91029.1"
                     /translation="ELQPPEGMPELQPVVFGNQTLQGALMPQRTLARSAVLYGQGLHS
                     GKKSGLIFEPLGPDSGIHFVGVSDNRAIPAHLDFVESTGYATTIRLGSTHVATIEHVM
                     SALNAYGVSNLLIKCNGEVPVLDGSSVEFCSLFEEVGFQNQIGDWHQIAVEEPLRIDA
                     GKASIRLEPCDAFEIDYTLEYPAPVGKQRFVFRLDDPAIYRKEIAPARTFGFARDIGQ
                     LQRQGLALGGRFDNFVLFGEEGPINDALRFPDEPVRHKIMDMIGDLYLLGRRLQARVV
                     ARMTGHTQNIAVLKKVRELL"
     gene            889..1710
                     /locus_tag="VK429_04145"
     CDS             889..1710
                     /locus_tag="VK429_04145"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HLN91030.1"
                     /translation="MTPWAVAFLALLLLSGPRSAVGETIRISGTGGAIGTMRTLGEAF
                     RKTAPGVRVDILPATGSSGSVKAVLAGRLDIGLSARTLSGEERAQGAVETKYARTPFV
                     FCVNNTLKMTGLTLEGLAAIYSGGRDWENGKRIRLVLRPPEDSDIPVLKGISPAMSAA
                     VEVALRRKGMIVATTDHDAADAIESVPGAFGGTTLSLLLSEERQLRMVSLDGITPSLR
                     AMNDRSYPYSKTFYMVTKKNPPASVRRFIDFVFSPAGAAILAKNGQGAVREGVLQ"
     gene            1707..3254
                     /locus_tag="VK429_04150"
     CDS             1707..3254
                     /locus_tag="VK429_04150"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN91031.1"
                     /translation="MKDPGRSIPRRIEGFGGVLLLILAAALPMLYFVNGWGLHSEHLR
                     TETEIYARQVSSLINRNPEMWKYETIRLEGLLAKRQEDPHTEAVRILDLQGNIVTQRP
                     ERIAWPRMTRSHPLMDSGLVVGSIEETASLRPLIVETAVLAIVGTAITLLLFFLLRTY
                     PMAALRNALDMLSREKGRATVTLQSIGDGVISTDPEERVLTVNRMAERITGWTQAEVV
                     GKPIDEVFRLEKDVFVDRYGVSRRIEATKSPILDEKDLRVGTVLVFRDVTEKARVETA
                     IANSQKLESLGVLAGGIAHEIRNPLSSINISISSIERACDGSTGLEHETKEKLDLILE
                     QMKSAAAKMGLVIQRVLDYSKPFPPRKGIVDLNSVIEEAVRLSLSTLRKREIAVLKDL
                     APDLSTCRVDAQMIEQVLVNLITNACQAMEGNERAKLLEIASSVQEGRIVLRVSDSGP
                     GVPPSLRERVFDPFFTTRKDGSGIGLSFSHRIVVDHGGALRIGTSRWGGAEFRIEIPV
                     AKEGISA"
     gene            3257..>3871
                     /locus_tag="VK429_04155"
     CDS             3257..>3871
                     /locus_tag="VK429_04155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012662498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLN91032.1"
                     /translation="MYSLFIVDDEDTIRGTLKIALEGRYRMADFPDAESAIAAARVDP
                     PDLVLLDLGLPGMSGIEAIPVFKAISPEILIVVITAYEDVKSVVSAMKGGAYDYVVKP
                     LNIDTLELSIGNALESIKLKKEVQALQERYLRENLPCFIGESNTIRDVMEFVGLVARS
                     ADTPVLILGETGTGKEMIASAIHYRSPNFRGPMIGVNCAAIPREL"
BASE COUNT          752 a         1193 c         1237 g          689 t
ORIGIN      
        1 cgaactccag cccccggagg ggatgccgga actgcaaccc gttgtgttcg gtaaccagac
       61 gctgcagggg gccctcatgc cgcaacggac gctcgcccgc agcgccgtat tgtacgggca
      121 ggggcttcac tccgggaaga agagcggcct gatcttcgag ccgctgggcc ccgattcggg
      181 gatccacttc gtcggtgtct ctgacaaccg ggcgattccc gcgcaccttg atttcgtcga
      241 gtcgaccggg tatgccacga cgatccgtct tggcagcacc catgtcgcga ccatcgagca
      301 tgtcatgtcc gcgctcaacg cctacggggt cagcaatctt ctcatcaagt gcaacggcga
      361 ggtccccgtg ctcgacggtt cgtccgtgga gttctgttcc ctgttcgagg aagtcggctt
      421 ccagaaccag atcggggact ggcatcagat cgcggtggag gaacctctcc ggatcgacgc
      481 cggcaaggcg tccatccggc ttgagccgtg cgacgcgttc gaaatcgact acacgctcga
      541 atatccggcg ccggtcggga agcagcgctt cgtcttccgg ctcgacgacc ccgcgatcta
      601 ccggaaggag atcgctccgg cccggacctt cgggttcgcc agggatatcg gacaattgca
      661 gcgacaggga ttggccctcg gcggacgatt cgacaacttc gtcctcttcg gggaggaggg
      721 accgatcaac gacgcccttc gattcccgga tgaaccggtg cgtcacaaga tcatggacat
      781 gatcggggac ctctacctgc ttggccggcg gttgcaggca agggtggtcg cccggatgac
      841 ggggcatacg cagaatatcg ccgtgctgaa aaaagtgcgg gagttgctgt gacaccttgg
      901 gcggtcgcct ttctggcact gctgctcctg tccgggcccc gaagcgccgt cggcgagacg
      961 atccggatct ccggaaccgg cggcgcgatc gggacgatgc gaactctcgg ggaggcgttc
     1021 cggaaaaccg ccccgggggt acgggtcgat atcttgcccg caacgggcag cagcggcagc
     1081 gtcaaggcgg tccttgcggg acgcctggac atcggattga gcgcccgaac gttgagcggc
     1141 gaggaacgcg cccaaggcgc cgtggagacg aagtacgcaa gaactccctt cgtgttctgc
     1201 gtcaacaata ccctgaagat gacgggcctg acgttggaag gcctcgccgc gatctactcg
     1261 ggggggcgcg attgggagaa cggcaagcgg atccgcctgg ttctccgccc tccggaggat
     1321 tcggatatcc cggtcttgaa gggcatctct cccgcgatga gcgcggcggt cgaggtcgcc
     1381 ttgcgtcgca aggggatgat cgtagctacg acggaccatg acgcggccga cgccatcgaa
     1441 agcgtgccgg gcgccttcgg agggacgacg ctgtcgctcc tcctttccga ggagcgacag
     1501 ctccgcatgg tatcgctgga cgggataacg ccgagcctcc gggccatgaa cgacaggtcg
     1561 tacccttaca gcaaaacgtt ctacatggtg acgaaaaaaa atcccccagc ttcggttcgc
     1621 cggttcatcg atttcgtgtt ctctcccgcg ggagcggcca tcctcgcgaa gaacggtcag
     1681 ggtgcggtgc gggagggtgt ccttcaatga aggatcccgg gcggagcatc cccaggcgca
     1741 tcgagggatt cggaggggtt ctgctgctga tcctcgctgc ggccttgccg atgctctact
     1801 tcgtgaacgg ctgggggttg catagcgaac acctccggac ggaaacggag atctatgccc
     1861 gccaggtctc ctccctgatc aacaggaacc cggagatgtg gaagtacgag acgatccgtc
     1921 tcgaaggact actggcgaaa cgacaggaag atcctcacac ggaagccgtc cggatcctgg
     1981 acctacaggg gaacatcgtg acgcaacggc ccgaacggat cgcgtggcca cggatgacgc
     2041 gatcccatcc cctgatggat tccgggttgg tcgtgggatc catcgaggag accgcctccc
     2101 ttcgcccgct gatcgtggaa acggccgtcc tggccatcgt cggaacggcg atcaccctgc
     2161 tcctgttctt tcttctccgg acgtacccga tggccgcgct ccgcaacgcc ctcgacatgt
     2221 tgtcgcgcga gaaggggcgc gccaccgtca cccttcaatc gatcggggac ggggtcatct
     2281 ccaccgaccc ggaagagcgt gtcctcaccg tcaaccggat ggcggagagg atcactggat
     2341 ggacgcaggc ggaagtcgtc gggaagccca tcgacgaggt gttccgactc gaaaaggatg
     2401 ttttcgtcga ccgatacggg gtcagccgcc gcattgaggc caccaaatcc ccgattctcg
     2461 atgaaaagga cctccgcgtg gggaccgtcc tcgtattccg ggacgtgacg gaaaaggcgc
     2521 gggtcgagac ggcgatcgcc aattctcaga agctggagtc gctcggtgtc ctcgcggggg
     2581 ggatcgcgca cgagatccgc aaccccctct cctcgatcaa catcagcatc tccagcatcg
     2641 agcgcgcctg cgacggatcc acggggctcg agcacgaaac gaaggaaaag ctcgacctca
     2701 tcctggagca gatgaaatcg gccgccgcga aaatggggtt ggtcatccag cgtgtcctgg
     2761 attactccaa gccctttcct ccccgcaagg ggatcgtcga cctgaacagc gtcatcgaag
     2821 aagcggtccg gctctccttg tcgacgttgc ggaaacggga gatcgcggtc cttaaggacc
     2881 tcgctcccga cctctccacg tgccgtgtcg acgcccagat gatcgagcag gtgctggtca
     2941 atctgatcac gaatgcctgc caggcgatgg aaggaaacga gagggcgaaa ctcctggaga
     3001 tcgcgtcctc cgttcaggaa gggcggatcg tcctgcgtgt ttccgactcg gggccgggag
     3061 ttcccccttc cctcagggag cgggtcttcg atcccttttt caccaccaga aaggatgggt
     3121 cagggatcgg actcagcttc agccaccgga tcgtcgtcga ccacggcggg gcgctgcgca
     3181 tcggcacgag ccgatgggga ggagcggagt tccgcatcga gatccccgtc gcgaaggaag
     3241 gaatttcggc gtgaccatgt actccctctt tatcgtcgat gatgaagata ccatccgcgg
     3301 gacgctgaag atcgccctcg aggggaggta ccggatggcg gatttccccg acgcggagag
     3361 cgccattgcc gccgcccggg tcgatccgcc cgatcttgtc ctcctcgacc tcgggcttcc
     3421 ggggatgagc gggatcgagg ccataccggt gttcaaggcg atctccccgg agatcctgat
     3481 cgtcgtcatc acggcctacg aggatgtgaa aagcgtcgtg tccgccatga agggcggcgc
     3541 atacgactac gtggtgaaac cgctcaatat cgataccctc gaactgagca tcgggaacgc
     3601 cctcgaatcg atcaagctga aaaaagaggt ccaggctctc caggagcggt acctccggga
     3661 aaatcttccg tgcttcatcg gggagagcaa cacgatcagg gacgtgatgg agttcgtcgg
     3721 gctcgtcgcc cggagcgcgg acacccctgt cctcatcctc ggggaaaccg ggaccggcaa
     3781 ggagatgatc gcgagcgcga tccactacag gagtccgaat ttccgcggtc ccatgatcgg
     3841 cgtaaattgc gccgccatcc cgagggaact g
//
LOCUS       DATGYW010000298         2156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_176366, whole genome shotgun sequence.
ACCESSION   DATGYW010000298 DATGYW010000000
VERSION     DATGYW010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2156
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176366"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..582)
                     /gene="mlaD"
                     /locus_tag="VK429_04160"
     CDS             complement(139..582)
                     /gene="mlaD"
                     /locus_tag="VK429_04160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006918713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HLN91033.1"
                     /translation="MKRGRTETAVGLFLLAGIACLGYLSLRLGKLEVVGGDRVPVVAE
                     FSSVTGLRPGASVEIAGVEVGKIDSITIRDYKAVVGMEIRKGIVLQEDAIASVRTRGL
                     IGDKYISISPGASDRLIPPGGKIRETESAVDLEGIIGQLVHGSAK"
     gene            complement(602..1459)
                     /locus_tag="VK429_04165"
     CDS             complement(602..1459)
                     /locus_tag="VK429_04165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91034.1"
                     /translation="MNDGVHGKIVAHRASDGRGGICEPCSLGPYTGRSREPILRLVDV
                     EKTLDGRKVLDGVNLEIPRGQITAIIGLSGAGKTLLLKHMIGLMKPDRGQVLLDGVDI
                     NRLSRQGLYEARKRFGMLFQTGALFDSLTVFENVAFPLREKTGRTEGEIREKVRRILR
                     HVGLEEAEEKFPDELSGGMVRRVALARAVVMDPEILLFDEPTTGLDPIIRNSILNLIC
                     RTYHEEHFTMVMISHDIPDIFHWCHHVVVVHNGKVVEVGNPSEIQNSADPFVRQLVEG
                     DISGPVRMM"
     gene            complement(1506..>2156)
                     /locus_tag="VK429_04170"
     CDS             complement(1506..>2156)
                     /locus_tag="VK429_04170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009180616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaE family lipid ABC transporter permease
                     subunit"
                     /protein_id="HLN91035.1"
                     /translation="RNIVKQIHFIGVKSVFVIVLTAAFTGMVLALQGFYTLRKFGSEG
                     VLGSLVALSLIRGLGPVLSALLVTGRAGSALTAEIGIMRIGEQIDSLETMGIDPIRFL
                     VAPRLLGFLLSVPLLTAIFDVVGIYGGYLVGVKLLGVNAGVYLGQMEASVVLGDVTQG
                     IWKSLVFALLIAWVCTFKGYFTRRGAEGVSQATTSAVVVSSVLVLVCDYFLTSVLQ"
BASE COUNT          373 a          786 c          650 g          347 t
ORIGIN      
        1 ccagcgcccg ttcgatcgca ccgcggatct gctccgtggg ctggccgccc cgggcgacgc
       61 cgggcgcgca aaaggcgatc gccaggagcg ccgcgacccc cgcgacccat ccccgccccg
      121 atccccgcgc ccccggaatc acttcgcgct cccgtggacg agctgcccga tgatcccctc
      181 gaggtccacc gccgattcgg tttcccggat cttcccgccc ggcgggatca ggcggtccga
      241 cgcccccggg gagatgctga tgtacttgtc cccgatcagc ccccgggtgc ggacggaagc
      301 gatcgcatcc tcctgcagga cgatcccctt ccggatctcc atccccacga ccgccttgta
      361 gtcccggatc gtgatggagt cgatcttgcc gacttcaacc ccggcgatct cgacgctggc
      421 gccgggccgc aggcccgtga cggagctgaa ctccgcgacc acgggcacgc ggtcgccccc
      481 gacgacctcg agcttcccca gccggaggga gaggtacccc aggcaggcga tccccgccag
      541 gaggaacagc cccaccgccg tttcggtcct tcccctcttc atcccctcgc tccctccctg
      601 ctcacatcat ccgcacgggg ccggagatgt ccccctcgac caactggcgg acgaagggat
      661 cggcggagtt ctgtatctcc gacgggttcc ccacctcgac cacctttccg ttgtggacca
      721 cgacgacgtg gtggcaccaa tgaaagatgt ccgggatgtc gtggctgatc atcaccatcg
      781 tgaaatgttc ctcgtggtag gtccggcaga tgaggttgag gatggagttc cggatgatgg
      841 ggtccagccc cgtggtgggc tcgtcgaaca ggaggatctc cgggtccatc accaccgccc
      901 gcgccagggc cacgcgtcgg accatcccgc cggagagctc gtcggggaac ttctcctccg
      961 cctcttccag ccccacgtgc cggaggatcc ggcggacctt ctcccggatc tccccttcgg
     1021 tccttcccgt cttctcccgg agggggaacg ccacgttttc gaacacggtc agggagtcga
     1081 acagggcccc ggtctggaag agcatcccga accgcttccg ggcctcgtag agtccctgcc
     1141 gggacaaccg gttgatgtcg accccgtcca ggagcacctg gccccggtcc ggcttcatca
     1201 gcccgatcat gtgcttgagc agcaaggttt tccccgcacc ggagaggccg atgattgccg
     1261 tgatctggcc ccggggaatc tcgagattga ccccgtcgag caccttcctg ccgtcgaggg
     1321 tcttctccac gtcgaccagc cgaaggatcg gctcccggct gcggcccgtg tacggcccga
     1381 gggagcaggg ctcgcagatc ccccccctcc cgtcggacgc gcgatgggca acgatcttac
     1441 cgtggacgcc gtcgttcatt tcccctccat ctttccctgg ggtctcccga tccaccctac
     1501 cactcctatt ggagcaccga ggtgaggaaa tagtcgcaga ccaggacgag caccgaggag
     1561 acgacgacgg ccgacgtggt cgcctggctc acaccttccg ctccgcgccg cgtgaagtac
     1621 cccttgaacg tgcagaccca cgcaatgaga agggcgaaaa cgagggattt ccagatccct
     1681 tgggtgacgt cacccaatac cacgctggct tccatctgcc cgaggtagac ccccgcgttc
     1741 acgcccagga gcttcacgcc gaccaggtac cccccgtaga tccctaccac gtcgaagatc
     1801 gccgtcagca gcggcacgga cagcaggaac ccgaggaggc ggggcgccac gaggaaccgg
     1861 atcgggtcga tccccatcgt ctcgagggag tcgatctgct ccccgatgcg catgatgccg
     1921 atctccgccg tcagggcgga accggcccgc ccggtcacca acagggcgga gaggaccgga
     1981 cccagccccc ggatgaggga aagcgccacc agggagccga gcaccccttc cgagccgaac
     2041 ttgcggaggg tgtaaaatcc ctggagcgcc aggaccatcc cggtgaaggc ggccgtcagg
     2101 acgatgacga aaaccgactt cacgccgatg aagtggatct gcttcacgat gttgcg
//
LOCUS       DATGYW010000299         1907 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_401711, whole genome shotgun sequence.
ACCESSION   DATGYW010000299 DATGYW010000000
VERSION     DATGYW010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1907
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401711"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..971)
                     /locus_tag="VK429_04175"
     CDS             complement(99..971)
                     /locus_tag="VK429_04175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011697187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN91036.1"
                     /translation="MDVFLQTLVAGILKGGLYALIGIGMTLIMGVMGIINLAHGQLMM
                     LAMYVTFVLNTMGVDPYFSLFVAMPLLFLLGVVIQKFLLNPLIKVETILPENQVLMTV
                     GIGMVLTEIARFAFSSDYKYITTKYANQTFYLGNISFSMALTIAFGIALAFTAAMFWF
                     LLKTDLGRSIRATAQDKDAATLMGVNTGRITVVTFGLGSALVAAAGCLLAPVYYIFPD
                     LGGPFTAKAFIITILGGLGSTVGAIFGGVTLGLAESMGATYFGMEYEDIVGLTIFILV
                     LLFLPGGFKRLTKV"
     gene            complement(1110..>1907)
                     /locus_tag="VK429_04180"
     CDS             complement(1110..>1907)
                     /locus_tag="VK429_04180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011697188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN91037.1"
                     /translation="YDYIFRITPAASEYPQSVESFLKEVATDVKTAALLYENSAFGQS
                     SSKSFEKDCADLGLKIVVKEGYQAGAIDFKPILTKVKAANPDMIYMVSYVMDASLLMR
                     QSKELRINPKMFVGGGAGFTLPEFAKSAGDASDGVFSATLWVDTLPFPGAKEYAANFR
                     KKYGAETEYHGAEAYAAMYVVADALKRAKSTSAPTPKDVRDALAKTDMKTAFGPVKFV
                     SYGKKTQQNKLDTYMVQWQKGVLEAVWPKSAATKAYIYPTPPWDKRK"
BASE COUNT          365 a          594 c          595 g          353 t
ORIGIN      
        1 tggaggaagt agtcgctctt cacggccagg gggagcaggg cgaggaacgc aaggaggatc
       61 agcgggtaga ggtacttttt catcgcgcgc tcccggtttc agactttggt cagtcgcttg
      121 aagccgccgg gcaggaacag aagcaccagg atgaagatgg taaggccgac gatgtcctcg
      181 tactccatcc cgaagtacgt cgcccccatg ctttccgcga gccccagggt cacccccccg
      241 aagatggctc caaccgtcga tcccaggcct ccgaggatgg tgatgatgaa ggccttcgcc
      301 gtgaagggtc ccccgaggtc ggggaagatg taatagacgg gggcgagaag gcaccccgcg
      361 gcggcgacga gcgcggagcc cagcccgaag gtgaccaccg tgatccgccc cgtgttcacg
      421 cccatcaagg tcgccgcgtc cttgtcctgc gccgtcgccc ggatggaccg ccccaaatcc
      481 gtcttgagga ggaaccagaa catcgccgcg gtgaaggcga gggcgatccc gaacgcgatc
      541 gtcaacgcca tgctgaagga gatgttcccg aggtagaagg tctggttggc gtatttggtg
      601 gtgatgtatt tatagtccga cgagaaggcg aaccgggcga tctcggtcag caccatcccg
      661 atccccaccg tcatgagcac ctggttctcg gggaggatcg tctccacctt gatgagggga
      721 ttcaggagga acttctggat cacgactccc agcaggaaca ggaggggcat cgcgacgaag
      781 agggagaagt acggatcgac ccccatcgtg ttgaggacga acgtcacgta catcgccagc
      841 atcatcaact ggccgtgggc caggttgatg atccccatga cgcccatgat cagggtcatc
      901 ccgatcccga tcagggcgta cagcccgcct ttgagaatcc ccgcgacgag ggtctgcagg
      961 aaaacgtcca tggcatctcc cgccttgtcc ggccgggtgg atccacccgg cgaacacgat
     1021 tgcaatcgga caccgacgaa aaccgccgcc gggcggacgg aaggatcttc cgcccgacgg
     1081 ctatgcgcgg aaaaaccctt acggagccgt tacttgcgct tgtcccatgg cggcgtcggg
     1141 tagatgtacg ccttcgtggc ggcgcttttc ggccacaccg cctcaagcac ccccttctgc
     1201 cactggacca tgtacgtgtc gagcttgttc tgctgggtct tcttcccgta ggagacgaac
     1261 ttgaccggcc cgaaggccgt cttcatgtcc gtcttggcca gagcgtccct cacatccttg
     1321 ggggtgggcg ccgaagtgga tttcgcccgc ttcagcgcgt ccgccacgac gtacatcgcc
     1381 gcgtatgcct ccgcgccgtg gtactcggtc tcggcaccgt acttcttccg gaaattggcg
     1441 gcatactcct tggcgccggg gaacggaagc gtatccaccc acagggtcgc ggagaacacg
     1501 ccgtccgagg cgtcgcccgc gctcttggcg aactcgggaa gcgtgaaccc ggccccgccg
     1561 ccgacgaaca tcttcgggtt gatccgcagc tccttcgact gccgcatcag cagggaggcg
     1621 tccatgacgt aggaaaccat gtagatcatg tcggggttcg ccgccttgac cttcgtgagg
     1681 atcggcttga agtcgatcgc gccggcctgg tacccttcct tcaccacgat cttcaggccg
     1741 agatccgcgc aatccttttc gaacgacttc gagctggact ggccgaaggc gctgttttcg
     1801 tacaggagcg cggccgtctt gacatccgtg gccacttcct tgaggaacga ctccaccgac
     1861 tggggatatt cgctggcggc cggggtgatg cggaatatgt agtcgta
//
LOCUS       DATGYW010000300         2658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_20135, whole genome shotgun sequence.
ACCESSION   DATGYW010000300 DATGYW010000000
VERSION     DATGYW010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2658
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20135"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..741
                     /locus_tag="VK429_04185"
     CDS             118..741
                     /locus_tag="VK429_04185"
                     /inference="COORDINATES: protein motif:HMM:NF019958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HLN91038.1"
                     /translation="MARRGPNNGGEKRDRILRAAVKIFSRKGFFNSKVSEIARAAEVA
                     DGTIYLYFRNKDDLLISLFEEKMGEVVADVRRRIAAGGNALDRLRIFIENHMDLLERE
                     SGLVEVLQVELRQSTKFLKDYTPVKFFEYLEVISDILEEGKRDGILRPDLNVSVARRA
                     IFGALDELSLTYILSRKPKYHPTVTAAELCRLLLEGLCVPGAAAGKG"
     gene            746..1888
                     /locus_tag="VK429_04190"
     CDS             746..1888
                     /locus_tag="VK429_04190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012933137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLN91039.1"
                     /translation="MVGFDPTPEQEALREMSHKFAANEIRPRAAEWDRDGIFPLELFR
                     KAFDLGLMTGFIPEIFGGQGLTLLDTCILEEEISWGCSGVATSMNANALALGPILLAG
                     TEAQKRAFVQPFATEFRFASFCLTEPGAGSDPGGIATTARRDGDKYVLNGRKCFITNG
                     VHASQYTVFASTDRSRGHRGLSAFVVPRETPGVSPGKKEDKMGQRASETSDVLFEDVR
                     IPEANRLGAEGEGFKIAMRTIDYARAAVAAMAVGVARAAYEHAAEYGRQRVQFGQPIA
                     MNQAIYFLLADMATDIEAARLLTWKAAWLADQGKRNTKESSFAKAFAADLAMRAATDA
                     VQIFGGYGYMKDYPVEKLMRDAKLLQIFEGTSQIQRMVIAKETLLR"
     gene            complement(1903..>2658)
                     /locus_tag="VK429_04195"
     CDS             complement(1903..>2658)
                     /locus_tag="VK429_04195"
                     /inference="COORDINATES: protein motif:HMM:NF015692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HLN91040.1"
                     /translation="VLDPGRTADAIARAGRRDDPPGLSGFARNLLESGLPWHEAGENA
                     PESMPAVLVLPLALLRAGNFRRLKLETGILVSLTHTHPTAIAGAIAQACAVARILHTP
                     ASSLDVISFPRALSPVVAGIEPERGPRPRIGRSATTVGRKLGAELPALLLRRAPVQEM
                     QEALGNGTAAHEGIPFSLGCFLRSPGDFAEAVLPAVRHGGDARAVGAMAGALCGAYIG
                     ESGIPEHFLARLPGRRELGETAEGLLALARRDG"
BASE COUNT          453 a          854 c          937 g          414 t
ORIGIN      
        1 cggttttcgg gaatagcagg gcggtcctta tccccgaaac ggcctcgcct tgacatgccc
       61 ctggaggaaa tgtaccttcc agagtgaatg gagattcatt cacgggggga ggccgagatg
      121 gcacggaggg ggccgaacaa cggtggggaa aagcgggacc ggatcctgcg cgccgcagta
      181 aagatcttct cccgaaaagg attcttcaac tcaaaggttt ccgagatcgc ccgggccgcc
      241 gaagtcgcgg acgggaccat ctacctctac ttcaggaaca aggacgacct gctgatctcc
      301 cttttcgaag agaagatggg ggaggtggtg gcggacgtgc gccggaggat cgcggccggt
      361 gggaacgccc tcgaccgctt gaggatcttc atcgaaaacc acatggacct cctggagcgc
      421 gagtccggtc tcgtcgaggt tctccaggtc gagctgcggc agagcaccaa gttcctgaag
      481 gactatacgc cggtaaagtt cttcgagtac ctggaggtca tcagcgacat cctcgaggag
      541 ggaaagaggg acgggatcct ccgccccgac ctgaacgtca gcgtcgcgcg gcgcgccatc
      601 ttcggcgcgc tggacgagtt gtccctcacg tacatccttt cgaggaaacc gaagtatcat
      661 cccaccgtta cagccgccga gctgtgccgg ctcctcctcg aggggctgtg cgtgcccggg
      721 gcggccgccg gcaagggctg acggcatggt cggtttcgat ccgaccccgg agcaggaggc
      781 gctccgggag atgtcccaca agttcgcggc caacgagatc cggccgcggg cggcggagtg
      841 ggaccgggac ggcatcttcc cgctcgagct gttccggaag gcgttcgacc tcggactgat
      901 gacaggattc atccccgaga tcttcggggg gcagggattg acgctgctcg acacgtgcat
      961 cctcgaggag gagatctcct ggggatgctc gggtgtcgcc acttcgatga acgccaacgc
     1021 cctcgcgctg ggaccgatcc tcctggccgg caccgaagcg cagaagcggg cgttcgtcca
     1081 gccgttcgcg acggagttcc ggttcgcctc cttctgcctg accgagccgg gtgcgggctc
     1141 ggaccccggc gggatcgcca cgacggctcg ccgggacggg gacaagtatg tgctgaacgg
     1201 gcggaaatgc ttcatcacga acggcgtaca cgcgtcccag tacaccgtgt tcgcttcgac
     1261 ggaccgatcg cgtgggcaca ggggtctgtc ggccttcgtc gttccgcggg agacgcccgg
     1321 ggtctccccc gggaagaagg aagacaagat ggggcagcgc gcatcggaga cttccgatgt
     1381 cctcttcgag gatgtccgta ttcccgaagc caaccggctt ggggcggagg gggaggggtt
     1441 caagatcgcg atgcggacga tcgactacgc gcgcgctgcg gtggccgcga tggcggtcgg
     1501 cgtcgcccgg gcggcgtacg agcacgcggc ggagtacggg cgccagcggg tccagttcgg
     1561 tcagccgatc gcgatgaacc aggcgatcta tttcctgctg gcggacatgg cgaccgacat
     1621 cgaggcggcc cggctgctga cgtggaaggc ggcgtggctc gcggaccagg gaaagcggaa
     1681 cacgaaggag tcgtccttcg ccaaggcgtt cgcggccgac ctcgcgatgc gcgccgccac
     1741 cgacgccgtc cagatcttcg gcgggtacgg ctacatgaag gattaccccg tggagaaact
     1801 gatgcgggat gcgaagctcc tgcagatctt cgaggggacc agccagatcc agcggatggt
     1861 catcgcgaag gaaaccttgc tgcgctgacg ttgccctgcc cgctatccgt cgcgtcgcgc
     1921 gagggcgagc aacccctccg ccgtttcccc gagttcccgt cgccccggca ggcgcgcgag
     1981 gaaatgctcc gggatccccg actccccgat gtaggcgccg cacagcgcgc ccgccatcgc
     2041 tccgacggcg cgcgcatccc caccgtggcg gaccgccggc aggaccgcct cggcgaaatc
     2101 tcccggcgaa cggaggaagc atccgaggga gaaggggatc ccttcgtgcg cagccgttcc
     2161 gttcccgagc gcctcctgca tctcctggac gggggcgcgc cgcaggagga gggcggggag
     2221 ctccgccccc agcttccttc ccaccgtcgt ggccgatctc ccgatccgcg gccggggtcc
     2281 ccgctcgggc tcgatcccgg caacgacggg ggagagcgcc ctggggaagg agatcacgtc
     2341 gagcgaggac gcgggggtgt gaaggattcg cgcgaccgcg cacgcctgcg cgatcgcccc
     2401 cgcgatggcc gtcgggtggg tatgcgtcag cgagacgagg attcccgtct ccagcttgag
     2461 cctccggaag ttcccggcgc ggagcagcgc gagggggagg acaaggacgg cgggcatgct
     2521 ctccggggcg ttttccccgg cctcgtgcca ggggagcccg ctctcgagga ggttgcgcgc
     2581 gaatcccgag aggcccggcg ggtcgtcccg acgtcccgct cgggcgatcg catcggccgt
     2641 cctccccggg tcgaggac
//
LOCUS       DATGYW010000301         1587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_401980, whole genome shotgun sequence.
ACCESSION   DATGYW010000301 DATGYW010000000
VERSION     DATGYW010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401980"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..802
                     /locus_tag="VK429_04200"
     CDS             <1..802
                     /locus_tag="VK429_04200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009579881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HLN91041.1"
                     /translation="SSPPAPVVVTDRFPKDEHHGWKFIRFGPDGMLYIPVGAPCNVCE
                     RADPRYAAILRMRPDGTGLEVFASGVRNTVGFDWNPGTGELWFTDNGRDLMGDDLPPD
                     ELNRAPRKGLHFGFPYVHGKNLPDPEFGARGKPAGFTPPEWELPAHVASLGMRFYSGR
                     MFPPGYRGQVFIAEHGSWNRSKPIGYRISLVRVEGNRATSYEVFADGWLQEDRTWGRP
                     VDVQEMPDGSLLVSDDMAGRIYRISYEGKAVPPGCEPGRTGETDDEGS"
     gene            822..>1587
                     /locus_tag="VK429_04205"
     CDS             822..>1587
                     /locus_tag="VK429_04205"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HLN91042.1"
                     /translation="MTVEELIGEMHRTVDGLGEDGASRADLKLLSRTLKELRHAFRFF
                     DGLRTLPKVTVFGSARLPADSPAYRQAELFGRAMARSGWFVVTGAGEGIMEAAHVGAG
                     REHSIGVNILLPFEQPENTVMEGNPNLIQTKYFFTRKLLFLKESSGVVLFPGGFGTMD
                     EAFEVLTLLQTGKTHPFPVVLLDEPGGTYWATWHRFIEDNLLKTGLISAEDLSLFRIT
                     SSVEEAVREIHGYYRVFHSMRYVGRDLVIRLRSPLSS"
BASE COUNT          284 a          470 c          540 g          293 t
ORIGIN      
        1 ctcctccccc cccgccccgg tcgtcgtcac cgatcgcttc ccgaaggacg aacaccacgg
       61 ttggaagttc atccgcttcg gtcccgacgg gatgctctac atccccgtgg gggctccgtg
      121 caacgtctgc gagcgggccg acccgcgcta tgccgcgatc ctgcggatgc gccccgacgg
      181 aacagggctg gaggtcttcg cgtcgggggt gcggaacacg gtcgggttcg actggaatcc
      241 gggcaccggg gaactctggt ttaccgacaa cggccgcgac ttgatggggg acgacctccc
      301 tccggacgaa ttgaatcgtg cgccgcggaa agggctccat ttcggttttc cctacgttca
      361 cgggaaaaat cttcccgatc cggaattcgg ggcaaggggg aagccggccg ggttcacgcc
      421 gccggagtgg gagttgcccg cccacgtcgc ttccctcggc atgcggttct actcggggag
      481 gatgttccct cccgggtatc gaggccaggt tttcatcgcc gagcacggct cgtggaaccg
      541 gtcgaagccg atcgggtacc gcatctccct cgtccgggtg gaagggaacc gcgccacgag
      601 ctatgaagtg ttcgcggacg ggtggctgca ggaggaccgg acctggggcc gaccggtcga
      661 cgtgcaggag atgcccgacg gatcccttct ggtctccgac gacatggccg ggagaatcta
      721 ccggatctcc tacgagggaa aagcggtgcc tccgggctgc gaaccgggaa gaacgggaga
      781 gacggatgac gaaggctcgt aagggtggaa ggaattcccg ggtgaccgtt gaggaactca
      841 tcggggagat gcacaggacc gtcgacggat tgggggaaga tggggcgagc cgggcagacc
      901 tgaagctcct ctcccgcacc ttgaaggaac ttcgccacgc cttccggttc ttcgatggtc
      961 tccggacact ccccaaggta acggtgttcg ggtcggcgcg tctgcccgcg gattcccccg
     1021 cgtaccggca ggcggaattg ttcggcaggg cgatggcgag gtcggggtgg ttcgtcgtca
     1081 ccggcgccgg cgaggggatc atggaggcag cccacgttgg agcaggacgg gagcactcga
     1141 tcggtgtgaa catcctgctg ccgttcgaac agccggaaaa cacggtgatg gaagggaatc
     1201 cgaacctgat ccagacgaaa tatttcttca cgaggaagct gctctttctc aaggagtcga
     1261 gcggtgtcgt tctcttcccc ggagggttcg gcacaatgga cgaggcattc gaggtgttga
     1321 cccttctcca gacggggaag acccatcctt ttcccgttgt gctgctggat gaacccgggg
     1381 gcacgtactg ggcgacgtgg caccggttca tcgaggacaa cttgctgaaa acggggttga
     1441 tctccgccga agatctctcc ctgttccgga tcacttcgag cgtcgaggag gctgtccggg
     1501 agatccacgg atattaccgg gtgttccaca gtatgaggta cgtggggcgg gacctggtga
     1561 tccgtctccg gagccccctt tcctccg
//
LOCUS       DATGYW010000302         1728 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_402031, whole genome shotgun sequence.
ACCESSION   DATGYW010000302 DATGYW010000000
VERSION     DATGYW010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1728
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_402031"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            228..1121
                     /locus_tag="VK429_04210"
     CDS             228..1121
                     /locus_tag="VK429_04210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006001808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN91043.1"
                     /translation="MELEPELAAQLKRVLSSLETLLPRPVPRIDWSECVAANWRKRSF
                     SGYLEPIGSIEDLRLEDLLGIEEQKRVVEENTRQFLAGLPANNILLWGSRGTGKSSLV
                     RALLHAYAPRGLRIVQVDKDDLVHLPAIVDEVKGLPHKFILFSDDLSFETGESSYKML
                     KSALDGSVYAPPENVLIYVTSNRRHLVPEYESDNRGAMMADGEIHHGEAVEEKISLSG
                     RFGIWVAFHPFSQDLYVEVVRRWVEKMCGKHGACLPWTKEARDESILWSQRKGDRSGR
                     IAYQFAAHWVGKELLRGEPVS"
     gene            1168..>1728
                     /locus_tag="VK429_04215"
     CDS             1168..>1728
                     /locus_tag="VK429_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015838510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HLN91044.1"
                     /translation="MPIPQDIVRISDTVWEIPVSHKIGMLVPARIFATETLLSDFDDG
                     VFEQITNVATLPGIVGHACCMPDGHWGYGFPIGGLAAMDPDHGVISPGGIGFDINCGM
                     RLCLTNLTYGEVQPRIRDLVDRIAGRVPAGVGAEGTVRLTRDEFRQAVEQGARWAVKR
                     GFGWKEDLERTEEGGCLSGADASRVSE"
BASE COUNT          283 a          569 c          587 g          289 t
ORIGIN      
        1 ggcgaccatc cggatgacga acggcatggc atccccctct tcttccgcgt cactccgtgg
       61 agtatacccc acccggcggg cgtcgccggg actccctctt cggctgcgtc gcctcggagg
      121 gcggggctcc gttcgtggct cgccgtgcga tgaacctgca cggctgcgct ttacctcact
      181 gcgcccccct cctgcggcga ctccgccgga ccctataagg agatgccatg gaactggaac
      241 cggaactggc cgcgcagctg aaacgggtgc tttcctccct cgagacgctg ctcccgcgcc
      301 ccgtgccgcg gatcgactgg tcggagtgcg tcgccgcgaa ctggcggaag cgctccttct
      361 cggggtacct cgaaccgatc ggaagcatcg aggaccttcg cctggaggat ctgctcggca
      421 tcgaggagca gaaacgggtc gtggaggaga acacccggca attcctcgcc ggcctccccg
      481 cgaacaacat ccttctgtgg ggttcgcgcg gcaccggaaa atcgtcgctc gtgcgggcgc
      541 tcctccacgc gtatgccccc cgggggctcc ggatcgtcca ggtggacaag gacgacctcg
      601 ttcaccttcc cgccatcgtg gacgaagtga aggggctccc ccataaattc atcctcttct
      661 ccgacgacct ctccttcgag acgggggagt cgagctacaa gatgctgaag agcgccctcg
      721 acggctcggt gtacgcgccg ccggagaacg tcctgatcta cgtgacgtcc aaccgacggc
      781 acctggtccc cgagtacgag agcgacaacc gcggcgcgat gatggcggat ggggagatcc
      841 accacggcga ggccgtggag gagaagatct ccctctcggg acggttcgga atctgggtcg
      901 ccttccaccc gttctcgcag gacctgtacg tcgaggtggt ccggcgatgg gtggagaaga
      961 tgtgcgggaa gcacggggct tgcctcccgt ggacgaagga ggcgcgggac gagtcgatcc
     1021 tctggtccca gcggaaaggg gaccggagcg gccgcatcgc ttaccagttc gccgcgcact
     1081 gggtggggaa ggagttgctg cggggggaac cggtctcgta gcgccccgcg atataatcaa
     1141 ggtagatccg acggtgggag gtgcgccgtg ccgatcccgc aggatatcgt ccggatctcc
     1201 gatacggtct gggagattcc cgtctcccac aagatcggga tgcttgtccc ggcccgcatc
     1261 ttcgccacgg aaacgctcct ttcggatttc gacgacggcg tcttcgaaca gattacgaac
     1321 gtcgccaccc ttcccggcat cgtgggtcac gcctgctgca tgcccgacgg tcactggggc
     1381 tacggtttcc ccatcggcgg cctcgccgcg atggaccccg atcacggggt gatctccccc
     1441 ggcggcatcg gcttcgacat caactgcggc atgcggctct gtctcacgaa cctgacgtac
     1501 ggggaagtcc agccgcggat ccgggacctc gtggaccgga tcgccgggcg cgttcccgcc
     1561 ggcgtggggg ccgaggggac cgtccggctc acccgggacg agttccggca ggcggtggaa
     1621 cagggggccc ggtgggcggt gaagcgcgga ttcgggtgga aggaggacct cgagcgcacc
     1681 gaggaaggcg gatgcctttc cggcgccgac gcctcgcggg tgagcgag
//
LOCUS       DATGYW010000303         1774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_295364, whole genome shotgun sequence.
ACCESSION   DATGYW010000303 DATGYW010000000
VERSION     DATGYW010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295364"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            228..554
                     /locus_tag="VK429_04220"
     CDS             228..554
                     /locus_tag="VK429_04220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91045.1"
                     /translation="MGPQSDVELIKAIYRAEREAERIVREAEEAAKALLAAAEAAARE
                     TVEAKNLEITRGEREKREKETGETEKEAQALLERTRLQVEAWVRRSEPEIDSIADALL
                     DRILPS"
     gene            551..>1774
                     /locus_tag="VK429_04225"
     CDS             551..>1774
                     /locus_tag="VK429_04225"
                     /inference="COORDINATES: protein motif:HMM:NF037381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91046.1"
                     /translation="MIAPMAKIRVLGPSSRLSAVIALFQEIGAIHIESTPSDIRRLQS
                     DIPVIRRHVLDPAAQQTRATLETALEKVRQLLLVLPSIPQGSEGEGIRDLVPEPSGAD
                     PLKAVNVQLDTLSARAASLVADLKRHQDEQSLFSRYDTVLKVLAPLIGMVRESRELEC
                     TGLILSSKEAAVATLLEDALSLLTDGRFEILYREVDKDTLAALLIFPVEKAAEARTLL
                     WEKNIGELRLPASVAEKPLPEALEIIARRQAELPPAIREIEASLAGMSREWRGTLLGL
                     RRWLGNRIERIRASGSFYETHATFLFHGWVPENELARLGKSITEAFGDLVIVERLPIE
                     KAEKEGVPVVLRNRPAVRPFEIFTRVLPLPRYGTIDPTPLVAFFFPLFYGIIIGDIGY
                     GLLLLAIARLVRWRYG"
BASE COUNT          300 a          625 c          560 g          289 t
ORIGIN      
        1 gcccttccca cttcccgaat ccggtgcggc gacctgtctc cggtcccatc ggcgcctcct
       61 tcgggtgtcc cgcagctccc gccggtcaag gttccgcgtt gccgaacgcc ggtccacctc
      121 caaatcctgt atgcagtata cactcgctat tttccctgtc gctatataaa atacaatcga
      181 ttcggcgttc cgccgccgcg atgcttccgg accagtttgg ggaccccatg ggaccgcaat
      241 cggacgtcga gctgattaag gcgatctacc gggccgaacg ggaggccgaa cggatcgtcc
      301 gggaggccga ggaagccgca aaggccctcc tcgcggcggc ggaggcggcg gcccgtgaga
      361 ccgtggaggc gaagaacctc gagatcaccc gcggggaaag ggagaaacgc gagaaggaaa
      421 ccggggagac ggagaaggag gcgcaagccc tcctcgaacg cacccgcctc caggtggagg
      481 catgggtccg gcgatcggaa ccggagatcg attccatcgc cgacgcgctc ctcgaccgga
      541 tcctcccgtc atgatcgcgc cgatggccaa gatccgggtc ctgggtccaa gctcccggct
      601 gtccgcggtg atcgccctgt tccaggaaat cggcgcgatc cacatcgagt ccacgccttc
      661 cgacatccgc cgcctccagt ccgacatccc ggtcatccgg cgtcacgtcc tcgaccccgc
      721 ggcccaacag acccgggcca ccctggaaac ggcgctcgag aaggttcgac agctcctcct
      781 cgttctcccc tccatcccgc aggggagcga gggcgaaggg atccgcgacc tcgtcccgga
      841 accttccggg gcggatccgc tcaaggccgt caacgttcag ctggacaccc tttcggcgcg
      901 cgccgcgtcc ctcgtcgccg acctgaagag gcaccaggac gaacagtccc tcttctcccg
      961 gtacgacacg gtcctcaagg tcctcgcgcc gctgatcggg atggtgcggg aaagccgtga
     1021 gctggagtgc acggggctga tcctttcctc gaaggaggcg gccgtggcga ccctcctgga
     1081 ggacgcgctc tccctcctga cggacggccg gttcgagatc ctctatcgcg aggtggacaa
     1141 ggatacgctg gccgcgctgc tcatcttccc ggtggaaaag gccgcggaag cgcgaaccct
     1201 cctctgggag aaaaacatcg gcgaactgcg ccttcccgcc tccgtggcgg aaaagccgct
     1261 cccggaggcg ctcgagatca tcgcgcgcag gcaggccgag cttccgccgg cgatccggga
     1321 gatcgaggcg agcctcgccg ggatgtcccg ggaatggcgg ggcacgctcc tcggtctccg
     1381 tcgctggctc gggaaccgga tcgagcggat ccgcgcgtcc ggctcgttct acgagaccca
     1441 tgcgacgttc ctgttccacg gctgggtccc ggaaaacgaa ctggcgcggc tcgggaagtc
     1501 gatcacggag gcgttcgggg acctcgtgat cgtcgagcgg ctccccatcg agaaggcgga
     1561 gaaggaaggc gttcccgtcg tcctgcgcaa ccgccccgcc gtccgtccct tcgagatctt
     1621 cacgagggtc ctgccgctcc cccggtacgg gacgatcgac cccacccccc tggtggcgtt
     1681 cttcttcccc ctcttctacg ggatcatcat cggggacatc gggtacggcc tccttctcct
     1741 ggcgatcgcc cggctcgtac gatggcgata cgga
//
LOCUS       DATGYW010000304         2768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_241397, whole genome shotgun sequence.
ACCESSION   DATGYW010000304 DATGYW010000000
VERSION     DATGYW010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2768
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_241397"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..729)
                     /locus_tag="VK429_04230"
     CDS             complement(85..729)
                     /locus_tag="VK429_04230"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015719559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HLN91047.1"
                     /translation="METRFGERWRDVLRFNRVDRRHVYPGVSLKVPRRLEDVEDFTPI
                     PAEYPGGDNEAKLILVDLEEQFLGAYEYGKRVFSAPVASGEVDNETPEGNFGVTAYHS
                     AHRSTDYFIEDTDIPYPMTWALRFHIDRDGVAYWIHGRDMPGYPASHGCVGLYDEAMQ
                     KKYYKVPRAPEMEDARKLFEWAIAPLADDGKFHPLKGGPVVRIVGGTPGKKPRE"
     gene            complement(900..1433)
                     /locus_tag="VK429_04235"
     CDS             complement(900..1433)
                     /locus_tag="VK429_04235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011936975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HLN91048.1"
                     /translation="MKVAAGGAFLLLSGKGFPRIAAAGAVSPGPEGRLSLFNTHTGER
                     LSVDYRDGSGECIPEAVSAMNRILRCHYTQQVAEMDLRVIDFLNAVDRSLGGGNDIHI
                     VSGYRSPEYNEKLVRRGQGVARHSLHLQGKAIDFRIPKASLPSLREAALRLQGGGVGY
                     YPGSGFVHIDSGRFRTW"
     gene            1666..2472
                     /locus_tag="VK429_04240"
     CDS             1666..2472
                     /locus_tag="VK429_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008314341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HLN91049.1"
                     /translation="MGDIITKGQELVTTFGVKVVTALLILVIGRWVAKFLRDLTGKMM
                     GKSNVDATLIKFVGSLVYFALLAFVVLAALAQVGIQTTSFIAIIGAAGLAVGLALQGS
                     LANFAAGVLLVIFRPFKVGDYIEGAGVGGIVEEIHIFNTLLGTLDNKAIIVPNAKMTG
                     DNITNFTMKEKRRVDLVFGVSYGEEIEKVKRVIAGVLGSDARILKDPSPTVAVLGIEG
                     GSVTFAVRPWVRTEDYWDVYFNTNENMKKQFDAEGIQIPVPRRDVHLRQA"
     gene            2604..>2768
                     /locus_tag="VK429_04245"
     CDS             2604..>2768
                     /locus_tag="VK429_04245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004511936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HLN91050.1"
                     /translation="MKGNEKLLGTLNSLLSDELTAISQYMVHSEMCANWGYEKLHKYF
                     EKRAIDEMKHA"
BASE COUNT          555 a          814 c          880 g          519 t
ORIGIN      
        1 acctgaaata cctgatcgcg cgttttccag ggacaaccac accttcccgg aaaaattccc
       61 gattggccca aaaagggggg cgggtcattc ccggggtttt ttcccggggg ttccgccgac
      121 gattcgcacc acggggcccc ccttcagggg gtggaacttc ccgtcgtccg cgaggggggc
      181 gatggcccac tcgaagagtt tccgcgcgtc ctccatctcc ggtgcccggg ggaccttgta
      241 atacttcttc tgcatcgcct cgtcgtagag tccgacgcag ccgtgggagg cggggtagcc
      301 gggcatgtcc cggccgtgga tccagtaggc gaccccgtcc cggtcgatgt ggaaccggag
      361 cgcccacgtc atcgggtagg ggatgtcggt gtcctcgatg aaataatccg tcgaccggtg
      421 ggcgctgtgg tacgcggtga ccccgaaatt tccttcgggc gtttcgttgt cgacttcacc
      481 cgaagcgaca ggtgcggaga agacccgctt cccatattcg taggcgccga gaaactgctc
      541 ctcgaggtcc accaggatca acttcgcctc gttgtcccct ccggggtatt cggcgggtat
      601 gggggtgaag tcctccacgt cctcgagccg gcggggaacc ttcagggaga cacccgggta
      661 cacgtgccgc cggtcgaccc ggttgaaccg gagcacatcc ctccaccgct ctccgaagcg
      721 cgtttccact ctctcgccct tcctgaggcg gagacaatcc cactcgattc gcaagtcgct
      781 cgggtgacgg accttgcaaa gggaggggtg tttggcgccg ggggccgccc agcaggcggc
      841 ggggaccgcg aggatcagaa ggagcccggc aaggagcgcc ccgggcgtga ggcggaacgt
      901 taccaggtgc ggaatcttcc cgagtcgatg tggacgaacc cggacccggg atagtacccc
      961 accccgcccc cctgcagacg gagggcggct tcccgcagcg acgggaggct cgctttgggg
     1021 atccggaagt cgatcgcctt cccctggagg tggaggctgt ggcgggctac cccctgtcca
     1081 cggcggacga gtttctcgtt gtactccggg gaccggtacc cggagacgat gtggatgtcg
     1141 tttccgccgc ccaggctcct gtccacggcg ttcaggaagt cgatcacccg gaggtccatc
     1201 tcggcgacct gctgggtgta gtggcagcgc aggatgcggt tcatggcgga aaccgcctcc
     1261 gggatgcact ccccacttcc gtcccggtag tcgacggaga gccgttcgcc ggtgtgggtg
     1321 ttgaagaggg agagcctccc ttccggaccg ggagatacgg cacccgccgc ggcgatgcgg
     1381 gggaacccct ttcccgagag gaggaggaac gcgccccccg cggcgacctt caaaatcgtc
     1441 cttcgatcga aacgcgtgcg atgcaacggt tcctccactg tgcggatgga tataaagggt
     1501 atgtcggaaa aaaggatgtg tacactatac catcatcgag agtatccccc gccagatgaa
     1561 ttctcttttt caaaatactg ctaaactctg caaagcggcg gcggccggtc atcgtcccac
     1621 aacccgggcg acaagaaatc cgtggaacgg aaaggagaca ggggtatggg agatatcatc
     1681 acgaaagggc aggaactcgt cacgactttc ggggtcaaag ttgtcacagc actcctgatc
     1741 ctggtaatcg gacgttgggt ggcgaaattc ctgcgggatc tcaccgggaa aatgatgggg
     1801 aaaagcaacg tggacgccac gctgatcaag ttcgtcggga gcctggtgta cttcgcgctc
     1861 ctggcgttcg tcgtcctggc agcacttgca caggtaggga tccagaccac ttcgttcatc
     1921 gcgattatcg gagccgcagg cctcgccgtg ggacttgcgc tgcaaggctc tctcgcgaac
     1981 ttcgccgcag gcgtgctgtt ggtcatcttt cgacccttca aggtcgggga ttacatcgag
     2041 ggggcgggtg tcggggggat cgtcgaggag atccacatct tcaacaccct gctcggcacc
     2101 ttggacaaca aggcgatcat cgtcccgaac gcgaaaatga ccggcgacaa catcacgaac
     2161 ttcacgatga aggagaaacg gcgcgttgac ctggtgttcg gcgtcagcta cggggaggaa
     2221 atcgagaagg tgaagcgcgt gatcgccggg gtgctgggga gcgacgcccg tatcctcaaa
     2281 gatccctcgc cgaccgtcgc cgtccttggg atcgagggcg gaagtgtcac cttcgccgtc
     2341 cgcccgtggg tccggacgga ggactattgg gatgtctatt tcaacacgaa cgagaacatg
     2401 aagaagcagt tcgacgcaga ggggatccaa atcccggtgc cacggcggga tgtccacttg
     2461 cgccaggcgt aggtggcggt cgtataatgc aaatgtttta aaatgacgcg ttggcgatgc
     2521 aacgttcccc tggccggtcc aatacccttg gatcgatcag tggggttgat ctccctcaca
     2581 acactcctcc ggaggtgacg tcgatgaaag gaaatgaaaa actccttgga acactgaact
     2641 ccctgttgtc ggatgaattg accgccatca gccagtacat ggtgcattcg gaaatgtgcg
     2701 ccaactgggg atacgaaaag ctgcacaagt actttgaaaa acgcgccatc gacgagatga
     2761 aacacgcc
//
LOCUS       DATGYW010000305         2211 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_295491, whole genome shotgun sequence.
ACCESSION   DATGYW010000305 DATGYW010000000
VERSION     DATGYW010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295491"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..433
                     /locus_tag="VK429_04250"
     CDS             <1..433
                     /locus_tag="VK429_04250"
                     /inference="COORDINATES: protein motif:HMM:NF015556.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91051.1"
                     /translation="LVAGAALAYGHGVVSWSPIDINMAKQMNLLLADLGFPPDRVLID
                     PLTGGLGYGMEYTFSIVERIRLAGLSGDAALAHPVLCHLGDAWKAREATDASEGTWGD
                     ADARGRRWEETTGLACLAAGADLLVCRHPSSVARLSGAAWR"
     gene            424..1776
                     /gene="acsC"
                     /locus_tag="VK429_04255"
     CDS             424..1776
                     /gene="acsC"
                     /locus_tag="VK429_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015738376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA decarbonylase/synthase complex
                     subunit gamma"
                     /protein_id="HLN91052.1"
                     /translation="MALTAIDIYKLLPKTNCRECGQSTCLAFAMQIAAGKASIDLCPP
                     ASEEAREKLSAAAAPPLPKVTIGTGEGEVVLGDETVLFRHEKTFYHPTAIAVSIRDDA
                     TDGEFASRLAAIRRLSFERVGQRISVDLVALRCASGDAGRYARAATAAFEATGLPLVL
                     LAPAGPLAAAVEAVAHSRPLLAPPPEDLVPAAKLAAERKLPLRVRARGIEGLSVGLAD
                     ARAAGAVSLVADPSPETPREAVSLATGLRRLAILGRVRDLAYPSAFDLGGGFPDPFLA
                     AALLVAKYGSLLVLDSADPADLLPLLTLRQNLFTDPQRPIQVEPGVYPIGGPSGSSPV
                     LITTNFSLTYFTVRGDAEAAKVPAYLLIADVDGMSVLTAWAAGKFTGESISKLLAECG
                     IGEKVAHRTLILPGMVARLSGRIEELSGWRVLVGPQESSALPSYLRRLPPDAFLPVHG
                     "
     gene            1769..>2211
                     /locus_tag="VK429_04260"
     CDS             1769..>2211
                     /locus_tag="VK429_04260"
                     /inference="COORDINATES: protein motif:HMM:NF012339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HLN91053.1"
                     /translation="MADGPWTIRFLPDGVDVPGIAGESLLSHALRGGVPLLSPCGGES
                     RCGKCRVLVAGETRGGEEPGALTRAEIAAGIRLACRCFPSSGDVSVTILPGSRPARLA
                     AYLDGKDMAGDEPFLPLSHAASGGASLGLALDLGTSTLAGTLVDLS"
BASE COUNT          273 a          831 c          766 g          341 t
ORIGIN      
        1 gctcgtcgcg ggcgcggcgc ttgcgtacgg tcacggcgtc gtctcctggt cccccatcga
       61 catcaacatg gccaagcaga tgaacctcct cctcgcggac ctcgggttcc cccccgatcg
      121 cgtcctcatc gacccgttga cgggaggtct cggctacggg atggagtaca ccttctccat
      181 cgtcgagcgg atccgcctcg ccggcctctc gggggatgcc gcgctcgccc acccggtact
      241 gtgccacctt ggggacgcat ggaaagcccg ggaggcgacc gacgcgtcgg aagggacctg
      301 gggcgacgcc gacgcgcgcg ggcgaagatg ggaggagacg acgggccttg cgtgcctggc
      361 ggccggggcc gacctgctcg tctgccgcca cccgtcgagc gtggcgcgcc tgtcgggggc
      421 cgcgtggcgc tgaccgcgat cgacatctac aaactgctgc cgaagaccaa ctgcagggag
      481 tgcggccaat cgacgtgcct ggccttcgcg atgcagatcg ccgccgggaa ggcgtcgatc
      541 gacctttgcc cgcccgcctc ggaagaggcg agggagaagc tgtcggccgc cgccgcgccg
      601 ccgctgccga aggtgacgat cggaaccggg gagggcgagg tcgtcctcgg cgacgagacc
      661 gtcctcttcc ggcacgagaa gaccttctac caccctacgg cgatcgccgt ttcgatccgt
      721 gacgacgcga cggacgggga gttcgcttcg cgtctcgcgg cgatccggcg cctctcgttc
      781 gagcgggtcg ggcagcggat ctccgtcgac ctcgtcgccc tccgctgcgc ctccggggac
      841 gcgggccggt acgcccgcgc ggccaccgcc gcgttcgagg cgacggggct ccccctcgtt
      901 ctcctcgccc cggcgggacc gctcgcggct gcggtggagg cagtggcgca ttcccggccg
      961 ctcctcgcgc ccccgccgga ggatctcgtc ccggcggcga agctcgccgc ggaaaggaaa
     1021 ctccccctgc gggtgcgggc ccgggggatc gaggggctat ccgtcgggct ggccgacgcc
     1081 cgcgccgccg gggccgtctc gctggtcgcc gacccctccc cggagacgcc ccgggaggcc
     1141 gtgtcccttg ccacgggcct gcggcgcctg gcgatcctcg gaagggtccg cgacctcgcg
     1201 tacccatcgg cattcgacct cggcggcggg ttcccggacc cgttcctcgc cgcggcgctc
     1261 ctcgtggcga aatacggctc gctcctcgtg ctggactccg cggacccggc ggacctgctg
     1321 ccgctcctca cgcttcggca gaaccttttc accgacccgc agcggccgat ccaggtggaa
     1381 ccgggcgtct acccgatcgg gggaccgtcc ggatcgtcgc ccgtcctcat caccaccaac
     1441 ttctccctca cctacttcac cgtccgcgga gacgcggaag cagcgaaggt ccccgcgtac
     1501 ctcctcatcg ccgatgtcga cgggatgtcc gtgctgacgg cgtgggccgc cgggaagttc
     1561 accggggaat cgatctcgaa gttgctcgcg gagtgcggga tcggggaaaa ggtggcgcac
     1621 cggaccctca tccttcccgg catggtggcg cgcctctccg gcaggatcga ggagctctca
     1681 gggtggcggg tcctcgtcgg cccgcaggag tcgtccgctc tcccgtcgta cctgcgccgc
     1741 ctccccccgg atgccttcct ccccgttcat ggctgacggg ccgtggacga tccgcttcct
     1801 ccccgacggg gtcgacgtcc ccgggatcgc cggggaatcg ctcctttccc acgccctgcg
     1861 cggcggcgtc ccgctcctct ctccgtgcgg cggggaaagc cggtgcggga aatgccgggt
     1921 cctggtggcc ggcgagaccc gaggcgggga ggagccgggg gcgctcaccc gggcggaaat
     1981 cgccgcgggg atccgcctcg cctgccgctg ctttccctcc tccggcgacg tctccgtgac
     2041 gatccttccc gggagccgcc ccgcccggct cgcggcgtac ctcgacggaa aggacatggc
     2101 gggggacgaa ccgttccttc ccctgtccca cgccgcatcg ggtggcgctt cgctcgggct
     2161 cgcgctggac ctggggacga gcacgctggc cggcacgctc gtggatctct c
//
LOCUS       DATGYW010000306         1561 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_176736, whole genome shotgun sequence.
ACCESSION   DATGYW010000306 DATGYW010000000
VERSION     DATGYW010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176736"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="VK429_04265"
     CDS             complement(<1..508)
                     /locus_tag="VK429_04265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91054.1"
                     /translation="MEGIRFAAGVASNPSDVVTLWQAAGGGKTVGCLPSTPVPELPHA
                     AGLLPIALDSREDLSLFHGKVNAWLVGADPPPFPTPSASIPRFAFPVVPSANLEEALE
                     RVEALAEWAGVVSGSPPSEGGLWKSIRAYAIRRLLLDALDERSTREPAFLTPEERRDI
                     VRAGIFLPP"
     gene            complement(534..1190)
                     /locus_tag="VK429_04270"
     CDS             complement(534..1190)
                     /locus_tag="VK429_04270"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HLN91055.1"
                     /translation="MPDFTRDETMDDVLSEVARESGEPEIQTGDPEVPVGEHVRAFRE
                     TLGMTVQQFAERTGFSPALLTQIENRMISPSLGTLVKIANTFGTTVSSFIGGRVEREF
                     SIVRKEDRTTVSRVGLKEGGKSTYTYESLGAGKAGRKMEPFLVRLQPLSESPTARSAH
                     DGEEFLYVLSGKVTVCLGNLSDVLEEGDSIYYNSTIPHHVHSADEREALILAVIHAGA
                     "
     gene            complement(1171..>1561)
                     /locus_tag="VK429_04275"
     CDS             complement(1171..>1561)
                     /locus_tag="VK429_04275"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HLN91056.1"
                     /translation="SDEEIGSPVVGRPKGLLIMNGPSMEKFLPMLAPGGDLIINSSLV
                     EDRQVTRDDVRLLPVPADDIARNKIGSRQMASMVALGAYVARSGIVKLSTVFECLPKV
                     ISKKYEKFIPLNVNALKEGAALAGFHA"
BASE COUNT          278 a          496 c          506 g          281 t
ORIGIN      
        1 cggggggaag gaagattccg gcgcggacga tgtcccggcg ctcttccggg gtcaggaacg
       61 caggttcccg ggtggatcgc tcgtcgagcg cgtcaaggag caaccgacgg atcgcgtatg
      121 cccggatcga tttccagagc cctccctcgg atggcgggga tcccgacacg acgcctgccc
      181 attccgccag agcctcgacc cgctccagcg cctcttcgag attcgccgac ggtacgacag
      241 ggaacgcgaa ccgcggaatc gatgccgaag gagtgggaaa cggcggagga tccgctccta
      301 ccagccacgc gttcaccttt ccatgaaaga gggaaagatc ctcacgggaa tcgagggcga
      361 tcggcaacag accggcggcg tgcgggagtt ccgggacggg agtggacggt agacacccga
      421 cggttttccc gccgccggcg gcttgccaga gcgttaccac gtcggagggg ttggaagcga
      481 cgcccgccgc gaagcggatc ccttccaaga cgacgcgtcg tcgaacccgc accttacgcc
      541 ccggcgtgga tcaccgcgag gatgagcgcc tcccgttcgt ccgcggaatg gacatggtgc
      601 gggatcgtgg aattgtaata gatgctgtcc ccttcctcga gaacgtcgga gaggttcccg
      661 aggcacaccg tcaccttccc ggagaggacg tagaggaact cctcaccgtc gtgggcgctc
      721 cgcgccgtgg gagactccga aagtggctgt agccggacga ggaagggctc catcttcctc
      781 cccgccttcc cggctccgag ggattcgtag gtgtatgtgg actttccacc ttccttgagg
      841 ccgacccggg agacggtggt gcggtcctcc ttccggacga tggagaactc ccgctccacc
      901 cttcctccga tgaacgagga gacggtggtt ccgaaggtgt tggcgatctt cacgagcgtt
      961 ccgagggatg gcgagatcat ccggttctcg atctgtgtca gaagcgcggg ggagaatccg
     1021 gtcctctcgg cgaactgctg cacggtcatg ccaagggttt cacggaatgc cctcacgtgc
     1081 tcccccaccg ggacctcggg atctcccgtc tgaatttccg gttcaccaga ctccctggcc
     1141 acttcggaca ggacgtcgtc catcgtctcg tcacgcgtga aatccggcaa gggcggctcc
     1201 ttccttcaat gcgttgacgt tcagggggat gaacttttcg tacttcttcg agatcacctt
     1261 cgggaggcat tcgaacaccg tcgaaagctt cacgatgccg gatcgggcga cgtacgcccc
     1321 gagcgcgacc atcgacgcca tctgcctgct gccgatcttg ttgcgggcga tgtcgtccgc
     1381 ggggaccggg aggagccgta cgtcgtcccg ggtcacctgc cgatcctcca ccagggaact
     1441 gttgatgatg aggtccccgc ccggcgccag catggggagg aacttctcca tcgaggggcc
     1501 attcatgatg aggagcccct tcgggcgtcc gaccacgggg gagccgatct cctcgtcgga
     1561 g
//
LOCUS       DATGYW010000307         2449 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_456162, whole genome shotgun sequence.
ACCESSION   DATGYW010000307 DATGYW010000000
VERSION     DATGYW010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456162"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..601)
                     /locus_tag="VK429_04280"
     CDS             complement(<1..601)
                     /locus_tag="VK429_04280"
                     /inference="COORDINATES: protein motif:HMM:NF017009.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91057.1"
                     /translation="MAEKKLKIGEILVATGILKEEQLTEALRSQNQLGGTLGENLVRL
                     AFLTEEELLTALSDQLGMQHINLTKVEVPATVQRLVKIETVRLRRLLPIGFEGKRLVV
                     GMVDPTDLSALSEVEFQSGHATKPVILSASHFELAQAFFQAHGYGDVPLKFDAGKEAA
                     RHVRVENTLASMLTVLLSWKGQDLHLSAGAIPSIRVDNEI"
     gene            complement(856..1815)
                     /locus_tag="VK429_04285"
     CDS             complement(856..1815)
                     /locus_tag="VK429_04285"
                     /inference="COORDINATES: protein motif:HMM:TIGR02757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HLN91058.1"
                     /translation="MVLPRGHRRPEDRPGPDPPPQEGRGLRDRRIPAEQGHPVTSPIA
                     GPLLRLLAEGRGAELSPDPVAFPHRYVDPRDAEAAAFLAASFAFGSVLQIRTFLSRLF
                     DALSPSPHAALTAGKPAFRRPVAGLSHRFISSDGVYRFLRCVRAAYLEHGSLERLYIA
                     GRGEDAPDLRRDLARFLAGFRDRWGRDLGRERDFLFPRPERGSACKRHNLFLRWVVRG
                     PDGVDLGLWSAVSPRDLVVPLDTHMARLGGALGLTRRKTPDWRMAEEITASLRLVRPE
                     DPVAFDYPLTRLGILRVCTRSRRGVCDRCPVAPLCSLRFRTDG"
     gene            complement(1698..>2449)
                     /gene="hisG"
                     /locus_tag="VK429_04290"
     CDS             complement(1698..>2449)
                     /gene="hisG"
                     /locus_tag="VK429_04290"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014067383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HLN91059.1"
                     /translation="PDLSGLLIRAQEMARYVQDGILDMGLTGRDWVLEQNAKVKEVCP
                     LLYARGGLRPVRWVVAVPNDSPIQRVRDLQGKRVATELVQFTRRYLKKKGVEAQVEFS
                     WGATEVKAPRLADAIVELTETGSSLRANNLRVVETILESTTVLIANREAWKNPWKREK
                     IENIALLLQGALRAEEKVGLKMNVGRGDLDRILKVLPALQNPTISTLSEAGWFSLEVI
                     VDQKIVRDLIPLLKKEGASGIVEYPLNKVIP"
BASE COUNT          419 a          836 c          800 g          394 t
ORIGIN      
        1 ggatctcgtt gtcgacacgg atcgacggga tcgcccccgc ggagaggtgc aggtcctgcc
       61 ccttccacga gaggagcacc gtgagcatcg atgcgagggt gttctccacc cggacgtgcc
      121 gtgccgcctc cttcccggca tcgaacttca gcgggacatc cccgtaccca tgcgcctgga
      181 agaatgcctg ggccagctcg aagtgcgaag cggacaggat gaccggcttc gtggcgtgtc
      241 ccgactggaa ctcgacctcg ctcagggcgg aaagatcggt ggggtcgacc atgccgacca
      301 ccaggcgctt cccctcgaac ccgatgggga ggaggcggcg caggcggacg gtttcgatct
      361 tgaccagccg ctgcaccgtg gcggggactt cgaccttggt gaggttgata tgctgcatcc
      421 ccagctgatc ggacagggcg gtcagcagct cctcctccgt gagaaacgcg agccggacga
      481 ggttctctcc cagcgtcccc ccgagctggt tctggctacg cagcgcctcg gtcagctgct
      541 cctccttgag aatcccagtg gcgacgagga tctcgccgat tttcaacttc ttttccgcca
      601 tgctccgcct cccgggaccg atcctagtgc agcgtctcgc aaataccctg gcattcgagc
      661 gccgctgcat ccgctccagc ttcgttgcgc tagttcgccg tactctccca gtacgccttc
      721 actaccgcgc cttgctggcg cggcgcatct acgctctcga tgctcaggct atttgcgaga
      781 cgctgcacta gcatcctgat caaatctaac gcagcggtcg gaggcgggca acaccaattt
      841 caccccccga tcgcctcacc cgtccgtccg gaatcgaagc gaacagaggg gcgcaacggg
      901 gcaacgatcg cagacccccc ggcgggaacg ggtgcacacc cggaggatgc cgagacgggt
      961 aaggggatag tcgaacgcca ccgggtcctc cgggcggacg aggcgcaggg aggcggtgat
     1021 ctcctccgcc atccgccagt ccggcgtctt ccgccgcgtg agcccgagtg cgccccccag
     1081 tctcgccatg tgggtgtcga ggggaacgac gaggtcccgc ggcgacaccg cgctccacaa
     1141 cccgagatcg acaccgtccg gaccacggac gacccaccgc aggaacaggt tgtgccgctt
     1201 gcacgccgac ccgcgttccg ggcgggggaa gaggaagtcc cgctcgcgtc ccaggtccct
     1261 cccccatcgg tcgcggaacc cggcgaggaa ccgcgccagg tccctgcgaa ggtcgggggc
     1321 gtcctctccc ctccccgcga tgtagagccg ctcgagcgat ccgtgctcga ggtacgccgc
     1381 gcggacacag cggagaaaac ggtacacccc gtcggaagag atgaaccggt gggaaaggcc
     1441 ggcgaccgga cgccggaagg ccggctttcc ggccgtcaag gcggcgtgcg gcgacgggga
     1501 aagggcgtcg aagaggcgcg acaggaaggt ccggatctgg aggacggatc cgaaggcgaa
     1561 cgacgcggcg agaaacgcgg cggcctcggc gtcccggggg tcgacgtacc ggtgcggaaa
     1621 cgcgaccgga tcgggggaaa gctccgcgcc acgcccctcc gcgagcaggc gaagaagggg
     1681 acccgcgatc gggctggtta cgggatgacc ttgttcagcg ggtattcgac gatcccggag
     1741 gccccttcct tcttgaggag ggggatcagg tcccggacga tcttctggtc gacgatgacc
     1801 tcgagggaga accagccggc ctcgctcagt gtggagatcg tcgggttctg cagcgccggc
     1861 agcaccttga ggatccgatc gaggtcgccg cgaccgacgt tcatcttgag accgaccttc
     1921 tcctccgccc ggagagcgcc ctggaggagc agggcgatgt tttcgatctt ttcccgcttc
     1981 catggattct tccatgcctc ccggttcgcg atgaggacgg tggtcgactc gaggatcgtc
     2041 tccacgacgc ggaggttgtt cgcccgaagg ctgctccccg tctcggtcaa ctcgacaatc
     2101 gcgtcggcca ggcgcggcgc ctttacctcg gtggcccccc aggagaactc gacctgggcc
     2161 tcgaccccct ttttcttcag gtagcgccgg gtgaactgaa ccagttcggt cgccacccgc
     2221 ttcccctgca gatcccggac ccgctggatg ggggagtcgt tcgggaccgc gaccacccac
     2281 cggaccggcc gcaagccccc ccgcgcatag aggagggggc aaacctcctt caccttggcg
     2341 ttctgctcca gcacccagtc ccgccccgtc agtcccatgt cgaggatgcc gtcctggacg
     2401 tagcgcgcca tctcctgggc gcggatcagg agaccggaaa ggtccggat
//
LOCUS       DATGYW010000308         3470 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_456744, whole genome shotgun sequence.
ACCESSION   DATGYW010000308 DATGYW010000000
VERSION     DATGYW010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3470
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456744"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(284..1792)
                     /locus_tag="VK429_04295"
     CDS             complement(284..1792)
                     /locus_tag="VK429_04295"
                     /inference="COORDINATES: protein motif:HMM:NF039822.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5666 domain-containing protein"
                     /protein_id="HLN91060.1"
                     /translation="MTYFATFGNGGTERTNGTAVGPVAGFGSVTVGGAVFSEDNVTTV
                     VDDLGRNTGDLIAGMVLTVRGTLSADFGTGSANSITVEREVRGPIDDNGVLSDSGTIR
                     VLGQTVLVNPATVMVRSGGGEFDIEDLKTDVDNNALRPEIEVHGARDEGGVLHASFIG
                     RGQDNVLADETVWLRGSISGVDGLKRSFQIGDQQVNFSLIPSSGRVNWPITGLADGLV
                     VDVRGRLDAVGGNGIIRTDRTDDRIEVLKIDLGGSGDHVTMEGYVISGTTSSFAVSVP
                     GGTVAVTGGILPTGAAFDVGARVQVKGKVIGSAGTNVQASAIEVRRPNEILLEGSPDA
                     IDPVGNTITLLGKTVEVDDFTLFRDGTGTVRNQFGLADLSTGHTIRVAGVFDSAVPSG
                     TVLATKLERLTLVPASSVTAQGAVSAVAAPAYTVLGLPGIVVFTGQRQDTDYFLLGGI
                     QSDGATFFQNLSIGTIVIVRKGIFTGDPPRIAEPDPGSTVGPMEVEIVRVNP"
     gene            2288..2992
                     /locus_tag="VK429_04300"
     CDS             2288..2992
                     /locus_tag="VK429_04300"
                     /inference="COORDINATES: protein motif:HMM:NF016269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding SYLF domain-containing protein"
                     /protein_id="HLN91061.1"
                     /translation="MNRERTGRIGIRLLAIVTILTAMCLTAPALKAMAGDAEDAQAFV
                     ERARITFGEFMRDDNYSWMRNHLKDAKGVLIYPQVLKAGYILGGSGGTGVLMVREGNG
                     GWSHPAFYTMGSVSFGLQIGGESAEVIMLVMSQKGIDSLLTSKMKLGGDASAALGPIG
                     GGAEGDVTVDFLSFAKSKGLYAGLNLNGSYISVRDGLNKAYYGRDVTPVDIIVKQSVG
                     NKAADSLREELEKAAK"
     gene            complement(3256..>3470)
                     /locus_tag="VK429_04305"
     CDS             complement(3256..>3470)
                     /locus_tag="VK429_04305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91062.1"
                     /translation="GSHFVTHTDWGCMDGDHKAWLIVEVDSKEDARRILPPAFRSQAR
                     IVGLNKFSMEQIEEILLHHEPQEKAG"
BASE COUNT          693 a         1045 c         1022 g          710 t
ORIGIN      
        1 atcccttaac gcgggatgta cgacattcta atgctgtagg ccccccctgc atgaaggctt
       61 ctccacgagc agtcccttat gtgcggttcg gcgacgtgca cgtaaatcat cgccttattg
      121 agggggtggt tgggaaaccc gtggggattc gagtgccccc ttcggcacca tggcaataga
      181 cataggggtc ttgggttatc gccaggctgt cggatcttca gtgttaacta tttgaaactg
      241 catgtgattc ttccataaat cgctttgtct taaagcggcc ccctcagggg ttcactcgta
      301 cgatttccac ctccatcggg ccgacggtgc ttcccggatc cggttcggcg atccgcgggg
      361 gatctccggt gaaaatcccc ttccttacaa tgacgatcgt cccgatggag aggttctgga
      421 agaaggtcgc cccgtcgctt tggatcccgc cgagcaggaa atagtcggtg tcctgcctct
      481 gccccgtaaa aacgacgatc ccgggaaggc ccaggacggt gtaggccggg gcggccacgg
      541 cgctgaccgc cccctgcgcg gtgacggaac tcgcggggac cagggtcaga cgctcgagct
      601 tcgtcgccaa gaccgtgccc gaagggaccg cgctgtcgaa aactccggcc acgcggatag
      661 tgtggcctgt cgacaggtca gcgagcccga attggttccg gaccgtcccc gtcccatccc
      721 ggaacagggt gaaatcgtcg acctccaccg tctttcccag aagtgtgatg gtattcccca
      781 cgggatcgat ggcgtccgga gacccctcca gaagaatttc gttcggcctc cgcacctcga
      841 tggcactggc ctgcacgttc gtgccggctg agccgatgac cttccctttc acctggacac
      901 gcgcccccac gtcgaaggcc gcacccgtcg gcaggatgcc gccggtcacc gcgaccgtcc
      961 cgccggggac cgaaaccgcg aaggaggacg tcgttccgga tatgacgtat ccctccatcg
     1021 tgacatggtc ccccgaaccc cccagatcga tcttcaagac ctcgatgcgg tcgtcggtcc
     1081 ggtcagtccg tatgattccg ttccccccga cggcgtccag tcggccccgg acgtctacca
     1141 ccagaccgtc cgcgagtccc gtgatgggcc agttcacacg accggaggac ggaatcaacg
     1201 agaagttgac ctgctggtcc ccgatctgga atgaccgttt caggccgtcg accccgctga
     1261 tcgaaccgcg gagccagacg gtttcatccg ccaggacgtt gtcttgtccc cgtccgatga
     1321 acgaagcgtg cagaaccccc ccttcatccc ttgctccgtg tacttctatc tccggacgca
     1381 acgcgttgtt gtccacgtcg gtttttagat cctcgatgtc gaattcgccg ccgccggagc
     1441 gcaccatgac ggttgccggg ttcacgagta ccgtctgccc caacacccgg attgttccgg
     1501 aatccgaaag aacgccgtta tcgtctatcg gaccccggac ttccctctcg acggtgatgg
     1561 agttggcgga tccggtcccg aagtccgcgg aaagcgtccc ccggacagtg agcaccattc
     1621 ccgcgatcag atcgccggta ttccgcccga ggtcgtccac gaccgtcgtc acgttgtcct
     1681 cggaaaacac cgcgccgccg accgtgacgc tcccgaaccc cgcgaccgga ccgacggccg
     1741 taccgttcgt gcgttccgtg ccaccgttgc cgaacgtcgc gaagtacgtc acctcccagc
     1801 aggatgagag caggaggaag gcaaggggcc agaggaggct tgatatgtga cgaccataag
     1861 ccgaccagcg cggcattccg gatctgtacg gcaaatccac gactcccccc gattgatccc
     1921 tctccttatc cgattcattt tccaccccgc gggccggtac ttcaagacgt ctctccaccg
     1981 cggcatcccg tttttgtttc gaatgtctct acagattttt ggaggaaagc cgcaagttgg
     2041 acagattctt cgatccggat aggatggttt ccatacgcct gagatgctgc gtggccgcga
     2101 gcagttattg acaaattgca cgtggagatt ttcttctgat atccgctgaa ccaagggatc
     2161 gaaaccggag atattaccga ttctactgaa gcccttccgg gcttcatgaa tcaaacgaag
     2221 aaggcgggga aataaccgtt cgttttattt aaaagtggga tcaggtcgca tcagggaggg
     2281 aaggaagatg aaccgggaac gaacaggcag aatcgggatt cggttacttg ccatcgtaac
     2341 aattctcact gcaatgtgcc tcactgctcc ggctctgaag gcgatggcgg gggacgccga
     2401 agatgcccaa gcgttcgtcg aaagggcccg catcaccttc ggcgaattca tgcgagacga
     2461 caattacagt tggatgcgca accatctcaa ggacgcgaaa ggggtcctga tctacccgca
     2521 ggttctgaag gctggttaca tcctcggagg ttcgggcggc accggcgtac tcatggtgcg
     2581 ggagggcaat gggggatgga gccatcccgc gttttacacg atgggttcgg tgagctttgg
     2641 attgcagatc ggcggtgaat cggcggaagt gatcatgctg gtgatgagcc agaagggcat
     2701 cgattccctg cttacctcga agatgaaact gggaggtgac gcctcggccg ctctcgggcc
     2761 gataggcggc ggggccgagg gggatgtcac cgtcgatttt ctctcctttg ccaaatcgaa
     2821 aggcctctac gcggggttga atctgaacgg atcgtatatc agcgtccggg acggtctcaa
     2881 caaggcgtac tacggcaggg acgtgacccc cgtggacatc atcgtcaagc aatcggtcgg
     2941 aaacaaggcc gcggactcgc tgagagaaga actggagaag gcggcaaaat agggccgggc
     3001 gtgcggacgg ggccatcgac gcgtgacctg tcccctcgaa tcggtccgag atgtgttcat
     3061 gattttcagg aaaccgaacg ggttgcaaac gtccgtgcaa acaaccgctt gtatggcggt
     3121 gaaggggcgg ggctccctgg atgcggttgt cgaggggaaa tccttcttcg aatgattccg
     3181 ataattacag cctcccgctt ggaccgacag tcgacggttg tgtcatgctc ccgttactgg
     3241 gcaggagcta catgcttagc cggccttttc ttgtggctcg tgatgcaaga ggatctcctc
     3301 gatctgctcc atcgagaact tgttcaaccc cacgatccgg gcctgggaac ggaaagccgg
     3361 cggcaatatg cggcgggcgt cctctttgct gtccacctct acgatgagcc aggctttatg
     3421 gtccccgtcc atgcaccccc agtccgtatg cgtcacgaaa tgggagccgg
//
LOCUS       DATGYW010000309         2218 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_242095, whole genome shotgun sequence.
ACCESSION   DATGYW010000309 DATGYW010000000
VERSION     DATGYW010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2218
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242095"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..227)
                     /locus_tag="VK429_04310"
     CDS             complement(<1..227)
                     /locus_tag="VK429_04310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011700867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-nucleotide phosphodiesterase"
                     /protein_id="HLN91063.1"
                     /translation="MRVKVLGAAGSEVPGHNCPAFLIDGKILLDAGTIALSLNIREEH
                     SLGWILLTHAHFDHIKGIPFLLDNLVIRNTG"
     gene            complement(276..1988)
                     /locus_tag="VK429_04315"
     CDS             complement(276..1988)
                     /locus_tag="VK429_04315"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HLN91064.1"
                     /translation="MILDDGSRVAVIGGGPAGSFFTYFLFEMAERIGMELAVDIYEPR
                     DFTRAAPHGCNMCGGIISESLVQLLATEGINLPSSVVQRGIDSYVLHMDVGTVRIEPT
                     RREKRIAAVHRGGGPRGVVESRWHSFDAHLLEMAKGRGAQVHHERVEGIDRDGGKPRV
                     TTKKGTSPGYDLLVGAVGVNTGALKLFEEMGAGYRAPGTTKTYICELFLGERTIKTYF
                     GNSMHMFLLNLPRLEFAALIPKGDYVTMVMLGNGIDKTLVDAFFSTPEVRKCFPSDWS
                     PLADFCHCSPAINISAAVKPFADRMVLIGDSGVSRLYKDGIGGAYRTAKAAARTAVFE
                     GVAEEDFRKGYLPVCRSLSMDNGIGKVVFGITSLIQKTTVLRKGLLRMTAAEQESREW
                     HPRMSDVLWDTFTGSAPYKDVFRRSLHPVFLGRLLYETSMGMLPARREGGKKEDKVPF
                     GKTGELGKIYNSGEIIVRQGDVGECMYFIQSGKVEVIRESDGKDVKLAELGQGEFFGE
                     MALFEKGVRSATVRPLGEVRVLSVDKRLFLRKIHEDPALAFRIMQKMSRRIRELDKEL
                     GGLR"
BASE COUNT          383 a          736 c          663 g          436 t
ORIGIN      
        1 ttcccggtgt tccggatcac caggttgtcg agcaggaacg ggatcccttt gatgtggtcg
       61 aagtgggcgt gggtgaggag gatccacccc aggctgtgct cctcgcggat gttcagggag
      121 agggcgatcg ttcctgcatc caggaggatc ttcccatcga tcaggaaagc ggggcagttg
      181 tgcccgggga cctcggagcc ggcggcgccc aacaccttga ctctcaacct cgatgccctc
      241 ctgtcccatg tgcctctcga ggcggtggat tactcctaac gtaaaccccc cagttccttg
      301 tcgagttccc ggatccggcg cgacatcttc tgcatgatgc ggaaggcaag agccgggtct
      361 tcgtggatct tgcgaaggaa caacctcttg tcgacggaga ggaccctcac ttcgcccagc
      421 gggcggacgg tggcggagcg gacccccttc tcgaagaggg ccatctcccc gaagaactcc
      481 ccttgcccca gctcggcgag cttcacatcc ttcccgtcgc tctcccggat cacttcgacc
      541 ttgccggact ggatgaagta catgcactcg ccgacgtccc cctgccggac gatgatttcc
      601 cccgaattgt agatcttccc cagttcgccc gtctttccga atggcacctt gtcctccttc
      661 ttcccgccct cccggcgcgc ggggagcatt cccatcgaag tttcgtaaag aaggcgtccg
      721 agaaaaacgg ggtggagcga ccggcggaag acatccttgt acggcgcgct tccggtgaag
      781 gtgtcccaca ggacgtcgct catccgcggg tgccattcgc gtgattcctg ctccgccgcg
      841 gtcatccgca acagcccctt ccggagcacg gtcgttttct ggatcagact cgtgatcccg
      901 aagacgacct ttccgatacc gttgtccatc gagagcgacc ggcagacggg gaggtagcct
      961 ttccggaaat cctcctccgc caccccctcg aacaccgccg tcctcgcggc cgccttcgcg
     1021 gtccggtacg ccccgccgat cccgtccttg tagagccggc tcacgccgct gtcgccgatg
     1081 agcaccatcc ggtccgcgaa cggcttgacc gccgccgaga tgttgatggc gggagagcag
     1141 tggcagaaat cggccagcgg tgaccagtcg gaaggaaagc acttgcgcac ttcgggggtg
     1201 gagaaaaacg catcgacgag ggttttgtcg atcccgttcc ccagcatcac catcgttaca
     1261 taatcaccct tcgggatcag ggcggcgaat tcgaggcggg ggagattgag gagaaacatg
     1321 tgcatcgagt tcccaaagta cgtcttgatc gtcctctccc cgaggaacag ttcgcagatg
     1381 tacgttttcg tcgttccggg agcccgatag cccgcgccca tctcttcgaa gagcttgagg
     1441 gcccccgtat tcacgcccac cgcgccgacg aggagatcgt agccgggcga ggttcccttt
     1501 ttcgtggtga cgcgcggttt cccgccgtcc cggtcgatcc cttccacgcg ctcgtgatga
     1561 acctgggcgc cccgcccctt cgccatctcg aggaggtggg cgtcgaagct gtgccagcgg
     1621 gattcgacga ccccgcgcgg gcccccgccc cggtggacgg cggcgatccg cttctcccgg
     1681 cgcgtcggct cgatccgcac ggtcccgacg tccatgtgga ggacgtacga gtcgatcccc
     1741 cgctggacga cgctggaagg gaggttgatc ccctcggtgg ccagcagctg gacgagcgat
     1801 tcggagatga tccccccgca catgttgcac ccgtgcgggg cggctctcgt gaagtccctg
     1861 ggctcataga tgtccacggc cagttccatc ccgatccgtt ccgccatctc gaagagaaaa
     1921 taggtgaaga aggaacccgc gggtccgccg ccaattacgg cgacacggga accgtcgtcg
     1981 aggatcaagc cttctttttc cggcgcgagg ggagacgggc tgggtggacc tgaactcatt
     2041 ctgcctcccg aacctggttc gttccgccgt tccgatactt tccccggttc catggtaccc
     2101 cagggaagta agggggaaaa tcccaaaata atggcgttgt tccggttttg ctcccccgag
     2161 gcttcaagcg gttccttttc acttgacccg ctccgggccc gagacgaccg gtctcccc
//
LOCUS       DATGYW010000310         2130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_456879, whole genome shotgun sequence.
ACCESSION   DATGYW010000310 DATGYW010000000
VERSION     DATGYW010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456879"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..266)
                     /locus_tag="VK429_04320"
     CDS             complement(<1..266)
                     /locus_tag="VK429_04320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91065.1"
                     /translation="MKKSFLTGVFVLVPLVVSVALLLWFFEKVEGLFSPVIDGVVGAL
                     FPGTNHLPGTGVLAGLVIILLLGTLARNVVGKRLLDALDRLIQR"
     gene            320..1381
                     /locus_tag="VK429_04325"
     CDS             320..1381
                     /locus_tag="VK429_04325"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HLN91066.1"
                     /translation="MDHAVVMAGGSGTRFWPESRARRSKQFLNLTGGVPMIRETLLRL
                     FPVIPPEHVWVVAGIKDAPHLSHRDLGIPKRNILLEPEGKNTAPAVAYAAASIAREDQ
                     DAVVLATPADHAIGHVRAFQAILRKGLRLARETGRFVTLGVPPTHPSTGYGYIERGKP
                     FPGKVRGAFEVARFAEKPDLPTAKRFLHSGRFDWNSGLFLFSVATFADRLAKFLPEVD
                     RGFRRAFRGDRAGFRKRLARAYRRMPSISVDYGILEKETGILVLPANVGWSDLGTWSS
                     LHEFLSGTGENVAFGDVILSDCRSVLVRTDSGVAAVLGMDDVVVVRSGDAVLVCPRSR
                     SEEVKGVLEEVRRRFPALA"
     gene            complement(1391..1867)
                     /gene="greA"
                     /locus_tag="VK429_04330"
     CDS             complement(1391..1867)
                     /gene="greA"
                     /locus_tag="VK429_04330"
                     /inference="COORDINATES: protein motif:HMM:NF013440.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0006354 - DNA-templated transcription
                     elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HLN91067.1"
                     /translation="MLREVKQKLEEEMQRIEFELRVTLPKEIQAALGQGDLSENAEYE
                     SAKNRQSTIQARYAQIQKRLADLSRIDVSGVPKDRAGLGSEVTVENLESGEEVLYTLV
                     IPELADGNKSFVSMASPVGKALMNRRVGDTVTITIPRGTLEYEVRRIVTLTGDVLE"
     gene            complement(1881..>2130)
                     /locus_tag="VK429_04335"
     CDS             complement(1881..>2130)
                     /locus_tag="VK429_04335"
                     /inference="COORDINATES: protein motif:HMM:NF014912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HLN91068.1"
                     /translation="VDAKKLAKADTIQILRVAIDREREANRSYLEMAERSKKDSAKEM
                     FLSLAKEEELHEKILRAEVDSIGQNGFWCDMQEFTMEQ"
BASE COUNT          324 a          727 c          706 g          373 t
ORIGIN      
        1 atccgctgga tcagccggtc gagcgcgtcg aggagccgct tccccacaac gttccgggcg
       61 agcgtgccca gcagcaggat gatgacgagc ccggccagga ccccggtgcc cggaaggtga
      121 ttcgtgccgg ggaacagcgc cccgacgacc ccgtcgatca ccggcgaaaa gagtccctcg
      181 accttctcga agaaccagag aaggagcgcc accgacacca cgagggggac gaggacgaag
      241 accccggtga ggaaactttt tttcacgctg ccggacacgg gagtattcta tcgtaaatgc
      301 ttttccgggg ggcgatccca tggatcacgc ggtggtgatg gcgggcggat cgggaacgcg
      361 gttctggccg gagagccggg cgcggcggtc gaagcagttt ctgaacctca ccggcggagt
      421 gccgatgatc cgggagaccc tcctgcgcct cttccccgtc atcccgccgg aacacgtatg
      481 ggtcgtggcc ggcatcaagg acgcgccgca cctctcccac cgggacctcg gcatcccgaa
      541 acggaacatc ctcctggagc cggaggggaa gaacaccgcc cccgcggtgg cgtacgcggc
      601 ggcgtccatc gcccgggagg accaagacgc cgtggtcctg gccaccccgg ccgaccacgc
      661 catcggccac gtccgggcgt tccaggccat cctccggaag gggcttcggc tggcgcggga
      721 gacggggcgg ttcgtgaccc tcggcgttcc gccgacccat ccctccacgg ggtacggata
      781 catcgagcgg gggaagccgt tccccgggaa ggtccggggc gccttcgagg tcgcccggtt
      841 cgcggagaaa ccggaccttc cgacggcgaa gcggttcctc cattcgggcc ggttcgactg
      901 gaacagcggg ctgttcctgt tcagcgtcgc gacgttcgcc gaccggctgg cgaaattcct
      961 cccagaggtc gatcgcgggt tccgtcgcgc cttccggggg gaccgtgccg gtttccggaa
     1021 gcggctcgcg cgggcgtacc ggcggatgcc gtccatctcg gtcgactacg gcatcctgga
     1081 gaaggagacg gggatcctcg tcctcccggc gaacgtcggg tggagcgacc tcgggacgtg
     1141 gagctcgctg cacgagttcc tctcggggac gggggagaac gtcgcgttcg gcgacgtcat
     1201 cctctccgac tgccggtccg ttctcgtacg gaccgacagc ggcgtggcgg cggtgctggg
     1261 gatggacgac gtggtggtgg tgcggagcgg cgacgccgtg ctggtctgcc cgcgctcccg
     1321 ctcggaggaa gtgaagggtg tgctggagga ggtccggcgg cggtttcccg cgctggcgtg
     1381 acccccggcg ttattcgaga acgtccccgg tcagggtaac gatccgccgg acctcgtact
     1441 cgagcgtccc gcgggggatc gtgatcgtga ccgtgtcgcc cacgcggcga ttcatgagcg
     1501 ccttccccac cggcgacgcc atggatacga acgacttgtt cccgtcggcc agctccggga
     1561 tcacgagcgt gtagaggacc tcctccccgc tctcgaggtt ttccacggtg acctcgctcc
     1621 cgagccccgc ccggtccttc ggcacgcccg acacgtcgat gcgggaaagg tcggccagcc
     1681 gcttctggat ctgggcgtag cgcgcctgaa tcgtcgactg ccggttcttg gccgactcgt
     1741 actcggcgtt ctcggagagg tcgccctggc ccagcgccgc ctggatctcc ttgggaaggg
     1801 tcacccgcag ctcgaattcg atccgctgca tctcctcctc gagcttctgt ttcacctcgc
     1861 gaagcaacgc gatcccttcc ctactgttcc atcgtgaatt cctgcatgtc gcaccagaac
     1921 ccgttctgcc cgatcgagtc cacctcggcc cgcaggatct tctcgtgcag ctcctcttcc
     1981 ttcgccaggg agaggaacat ctccttcgcc gaatccttct tcgagcgttc cgccatctcg
     2041 aggtaggacc ggttcgcctc cctctcccgg tcgatcgcga cccggaggat ctgtatcgta
     2101 tcggccttgg ccagcttttt cgcatcgacc
//
LOCUS       DATGYW010000311         1708 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_127420, whole genome shotgun sequence.
ACCESSION   DATGYW010000311 DATGYW010000000
VERSION     DATGYW010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127420"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1708
                     /locus_tag="VK429_04340"
     CDS             <1..>1708
                     /locus_tag="VK429_04340"
                     /inference="COORDINATES: protein motif:HMM:NF017197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF748 domain-containing protein"
                     /protein_id="HLN91069.1"
                     /translation="FSVASIRLAGGKVRFADASREIPFKTALGDVRVDVDGVSTEAGK
                     KADATLSFSTESRETLELKGNLSLAPLGSEGTVSLAKLVLKKYAPYYNDAVRFDIDGG
                     SLDARSGYRFARGDNGPEFRLSGLGASISGLRLRQREEKEEFLRIPEFSFKDAEVDPG
                     KREIVVGEVATAKGTVAVRRSTGGETNVARLVPEGSPTAVPVDAKGTAGKPSSGKGSA
                     EQPWKVTIKKTIMNRYAVRFEDRTTAPPVEIALDRLRLTAENIAIGSRQRGRFSFATL
                     YNRQGNISLSGTFSADPPSLNAKLQARNLPIGPMQPYYTERVKIFLTGGSISTEGNVS
                     IDARKDQPLRAGFRGDVSVNDFSSLDKDLEEDFLKFSSLHFGGVEVGYHPTAVVIREI
                     TLTDFFSRIIVHPDGTLNLQGIVAKEGAGQDNAALKPATVRVPVKSAPADNASQAPDV
                     PVRIDTVTLQGGSVKFSDHYIKPNYSASLVEVGGRVSGLSSEESKLADIDLRGKLENS
                     SPLEIVGKINPLAKDLFLDLKVDFRDMDLSPLSPYSGRYAGYGIQKGKLTLNLKYHIE
                     KGK"
BASE COUNT          341 a          523 c          548 g          296 t
ORIGIN      
        1 cttctcggtc gcctccatac gccttgccgg ggggaaggtt cggtttgccg acgcctccag
       61 ggaaatcccc ttcaagaccg cattggggga tgtccgggtc gacgtggacg gcgtaagcac
      121 cgaggcgggg aagaaggccg acgccacgct gtccttttcg acggaatccc gggagacgct
      181 tgagctcaaa ggaaacctgt ctcttgcccc cctcggctcg gaaggaacgg tgtccctcgc
      241 gaagctggtc ctgaagaagt atgccccgta ctacaacgac gccgtgcggt tcgacatcga
      301 cggggggtcc ctcgatgcgc gatccggcta ccgttttgcc cgcggggata atgggccgga
      361 attccgtctc tccgggttgg gagcgtccat atcgggactt cggctgcgtc agcgggaaga
      421 gaaggaggag ttcctcagga tcccggaatt ctctttcaag gatgcggagg tcgacccggg
      481 caagagggag atcgttgtcg gggaggtcgc cacggcgaag ggaacggtcg ccgtgcgccg
      541 ttccaccggc ggtgaaacga acgtcgcccg cctcgtgccg gagggaagtc ccaccgcggt
      601 accggtcgac gcgaagggga ccgcggggaa accgtcctcc gggaaagggt ccgcggagca
      661 accgtggaag gtcaccatca agaaaacgat catgaaccgg tatgccgtga ggttcgagga
      721 tcgcaccacg gctccgccgg tggagatcgc cctcgacagg ctccggctga ccgcggagaa
      781 catcgccatc gggtcccgcc agcgtggcag attctccttc gccaccctgt acaaccgtca
      841 ggggaacatc tccctgagcg gcacattctc tgccgatcct ccgtcgctga acgcgaagtt
      901 acaggcgaga aaccttccga tcgggcccat gcagccgtat tacacggaga gggtgaagat
      961 cttcctgacg ggaggatcga tctcgaccga agggaacgtt tcgatcgatg cccgtaagga
     1021 ccagccgctg cgcgcggggt tccgcgggga tgtgtccgtg aacgacttct cttccctgga
     1081 caaggacctg gaagaggatt tcctgaaatt ctcgagcctc cacttcggcg gcgtggaggt
     1141 ggggtaccac ccgacggccg tcgtcattcg ggagatcacc ctgacggact tcttctcccg
     1201 gatcatcgtg cacccggacg gcacgctgaa cctccagggg atcgtcgcga aggaaggtgc
     1261 ggggcaggac aatgcggccc tgaagcccgc gacagtgcgc gtacccgtaa aatcggctcc
     1321 cgcggacaac gcgtcgcagg cgcccgatgt cccggtccgt atcgatacgg tgacgctgca
     1381 gggcggctcc gtgaaattca gcgaccatta catcaagccg aattactccg ccagcctcgt
     1441 ggaggtcggc gggcgcgtct ccggcctctc ctcggaggag agcaagctcg cggacatcga
     1501 cctgcgcggg aagctcgaga actcgtcccc cctggagatc gtcggaaaaa tcaacccgct
     1561 ggcgaaagat ctctttctcg atctcaaggt ggatttccgg gacatggacc tgtcgcccct
     1621 gtccccttat tccgggcggt atgccggata cgggatccag aaagggaaac tcaccctgaa
     1681 cctcaagtac cacattgaaa aaggaaag
//
LOCUS       DATGYW010000312         2200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_402901, whole genome shotgun sequence.
ACCESSION   DATGYW010000312 DATGYW010000000
VERSION     DATGYW010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_402901"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1296
                     /gene="dnaB"
                     /locus_tag="VK429_04345"
     CDS             <1..1296
                     /gene="dnaB"
                     /locus_tag="VK429_04345"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013279247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HLN91070.1"
                     /translation="LASVLLNNDLINGVMEVLRPSDFYQGAHRILYEVMVDLYDRGRP
                     IDQLTLSAVLKDRNAEQQVGGLPYLSEIVTSVPISDNVVHYARIVKEKSILRKTISAA
                     QEITTAAFQGVTDIDVFLDRTEQAIFAIAEEKIRPSYYAMGEMAREAMKEIEEAYERK
                     ERITGVASGFRDLDQVTAGFQRSNMIVVAARPGMGKTSLCLNIAVSAATKQKLPVAIF
                     SLEMSRQELAMRMICSEARVNFQRLRTGHLAQEEVNRLVAAVGKLSEAPIYTDDSGTL
                     SAMELRAKARRLKKERGIGMIIVDYLQLMHGSNTRQNSENRVQEVSEISRSMKSLAKE
                     LNIPVVAVSQLSRGVESRNDKRPQMADLRESGAIEQDSDLILFVYREEMYAKEKTPQE
                     AKGVAEIIIGKNRSGPMRDVKLAFLSQFTRFEDLAQDLE"
     gene            complement(1297..>2200)
                     /locus_tag="VK429_04350"
     CDS             complement(1297..>2200)
                     /locus_tag="VK429_04350"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HLN91071.1"
                     /translation="HERRFPMPLRRCPDILLSSLLLLLLASCAGREVTPSPVEPPRKA
                     VTVALVLGAGAAKGFAHVGVLKVLEANHVPVHMVVGTSVGSFVGSLYAYGYPAYDLQK
                     IAMGLETGEIADLTVPDNGFVKGEKLEAYVNRMVRGATMEKLRIPFYAVATDIGSGEE
                     MVFGKGNTGSAVRASCSIPGIFRPVQIGDRTYVDGGVVSPVAVDAARRLGADVVIAVD
                     ITGGVSGSVPDTTLDTIFQSVNVMYAKIAAAELSRADVVIRPMVGYIASGDFTKRHEA
                     ILEGEKAAQDALPKIRGLLGEPER"
BASE COUNT          410 a          742 c          706 g          342 t
ORIGIN      
        1 ctcgcgtcgg tcctgctgaa caacgacctg atcaacggcg tgatggaggt cctgcgcccg
       61 agcgatttct atcaaggggc gcacaggatc ctctacgagg tgatggtcga cctctacgac
      121 cgcgggcgcc ccatcgacca gctcaccctg tccgcggtcc tgaaggaccg gaacgccgaa
      181 cagcaggtcg gcgggctccc ctacctctcc gagatcgtca cctccgtccc catctccgac
      241 aacgtcgtgc actacgcgcg catcgtgaag gagaagtcga tcctccggaa gacgatctcc
      301 gcggcgcagg agatcaccac cgccgccttc cagggggtca ccgacatcga cgtcttcctc
      361 gaccggaccg agcaggcgat cttcgccatc gccgaggaga agatccggcc ctcctactac
      421 gcgatgggcg agatggcccg cgaggcgatg aaggagatcg aggaggcgta cgagaggaag
      481 gagcggatca ccggcgtcgc gtccggtttc cgggacctgg accaggtcac cgcggggttc
      541 cagcggtcga acatgatcgt cgtggcggcc cgcccgggga tgggaaagac ttcgctctgc
      601 ctcaacatcg ctgtgagcgc cgcgacaaag cagaagctgc ccgtcgcgat cttctccctc
      661 gagatgagcc gccaggagct ggcgatgcgg atgatctgct ccgaggcgcg cgtcaacttc
      721 cagcggcttc gcacggggca cctcgcgcag gaggaggtca accggctggt cgccgccgtg
      781 ggaaagcttt ccgaggcgcc gatctacacc gacgattccg ggacgctgtc ggcgatggag
      841 ctgcgggcga aggcgcggcg gctgaaaaaa gagcgcggca tcgggatgat catcgtcgac
      901 tacctccagc tgatgcacgg ctccaacacc cgccagaact ccgaaaaccg ggtgcaggag
      961 gtctccgaga tctcgcgctc catgaagtcg ctggccaagg agctgaacat cccggtggtc
     1021 gcggtctcgc agcttagccg cggggtggag agccggaacg acaaacgccc tcaaatggcg
     1081 gacctgaggg aatccggggc gatcgagcag gacagcgacc tgatcctgtt cgtttaccgc
     1141 gaggagatgt acgccaagga gaagacgccg caggaggcga agggggtcgc cgagatcatc
     1201 atcgggaaga accggagcgg ccccatgcgc gacgtgaagc tcgccttcct ctcgcagttc
     1261 acccgcttcg aggacctggc gcaggatctc gagtagctat ctttcgggct cccccaacag
     1321 gccccggatc ttcggcaatg cgtcctgggc ggccttctcc ccctccagga tcgcctcgtg
     1381 gcgcttcgtg aagtcgccgg aggcgatgta ccccaccatc ggccggatga ccacgtcagc
     1441 ccgggagagc tcggccgcgg cgatcttcgc gtacatcacg ttgaccgact gaaagatcgt
     1501 gtccaacgta gtatcgggga cggaaccgga gactcccccg gtgatgtcga cggcgatcac
     1561 cacgtccgcc cccaatcggc gcgccgcgtc caccgccacc gggctcacca cgccgccgtc
     1621 cacgtacgtc cggtcgccga tctgcaccgg ccggaagata ccggggatgg agcagcttgc
     1681 tcgcaccgcc gagcccgtgt tccccttccc gaagaccatc tcctcgccgg agccgatgtc
     1741 ggtggctacc gcgtagaagg ggatccgcaa tttctccatc gtggcgcccc gaaccatccg
     1801 gttgacgtac gcctcgagct tctccccctt cacaaacccg ttgtcgggga cggtcaggtc
     1861 cgcgatctcc cccgtttcga gccccatggc gatcttctgc agatcgtagg cggggtagcc
     1921 gtaggcgtac aggctaccga cgaaactccc cacgctggtc cccacgacca tgtggacggg
     1981 gacgtggttc gcttcgagca ccttcagcac tcccacgtgg gcgaacccct tggccgcacc
     2041 ggccccgagg acgagggcca ccgtcaccgc cttgcggggc ggctcgacgg gggacggcgt
     2101 cacttcgcgt cccgcgcagg aggcgagcag aaggagcagg agcgatgaaa ggaggatgtc
     2161 cgggcaacgt cgcaacggca tggggaacct ccgctcatgc
//
LOCUS       DATGYW010000313         2938 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_177432, whole genome shotgun sequence.
ACCESSION   DATGYW010000313 DATGYW010000000
VERSION     DATGYW010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2938
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177432"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1127)
                     /locus_tag="VK429_04355"
     CDS             complement(<1..1127)
                     /locus_tag="VK429_04355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HLN91072.1"
                     /translation="MVKPTGFMEYDREEPAHRPVTERVGDYREIEELLPEEGIYRQAA
                     RCMDCGIPYCHAYGCPVKNRIPDWNDMVYRKNWRKALDLLHATCNLPEITGRVCPAPC
                     ETACTLAINLPAVTIRHLELQIVEHGWREEWIRPEPAGFSTGKRVAVVGSGPAGLPAA
                     QQLARSGHEVVVFEKSDRIGGLLRYGIPDFKLEKWVIDRRLDQMRAEGVVFEKSVNAG
                     VDVSAAYLRRSFDAIVLAAGATAARDLPVPGRDLKGIHFAMEFLTQQNRRVAGDAIPA
                     GEAISAAGKHVVVIGGGDTGSDCIGTSRRQGAASITQIELLPKPPEDRLPTNPWPTWP
                     VVLRTSSSQEEGCERIWSVQTKAFLGEQGAVRKLSCVKLDWT"
     gene            complement(1120..>2938)
                     /locus_tag="VK429_04360"
     CDS             complement(1120..>2938)
                     /locus_tag="VK429_04360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013257974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HLN91073.1"
                     /translation="GGEDPERNIPLPNGDSRRSRIRQVASARFGATTEYLVNADELQI
                     KMAQGAKPGEGGQLPGHKVSPEIARIRHTVPYVTLISPPPHHDIYSIEDLAQLIYDLK
                     SVNPRANVSVKLVSEVGVGTIAAGVAKAKADLVLIAGSDGGTGASPLTSIKHTGLPWE
                     LGLAETQQALIYNRLRDRIRVQVDGQLKTGRDLAIAALMGAEEFGFGTAVLVSLGCIM
                     MRACHLNTCPVGVATQDPVLRARFGGAPEYVVRFLRFVSEELREYMAELGFRTLDEMV
                     GRVDLLEVQPAVEHWKAKGLDFSAILLPPDNGLHSPLHCVRPQEHEVGKALDYEIMAL
                     ARSALDRKEPVRIEMPIRNVHRSIGAALSGEITRRYGAAGLPDDTIHLTLFGSAGQSF
                     GAFLAPGVTMHVHGDANDYLGKGMSGGRIVVTPPEGATFLPHKNVIVGNVVLYGATGG
                     EAYFHGTAGERFAVRNSGGKAVVEGVGDHGCEYMTGRVVVVLGPTGNNFAAGMSGGLA
                     YVYDETELFDTRCNLDMVDVESVWQEGDIKRLHAMIESHFRYTGSQRAAQILENWESR
                     LPLFVKIMPIEYRKSLDRMRMEEEMNTESVSATEEVYRG"
BASE COUNT          420 a         1053 c          961 g          504 t
ORIGIN      
        1 gtccaatcca gtttcacgca ggagagtttc cggaccgctc cctgttcgcc gaggaacgcc
       61 ttcgtctgga cgctccaaat ccgctcgcac ccttcctcct gggaggagga ggtccgaagg
      121 acgaccggcc acgtgggcca cgggttggtc gggagccggt cttccggagg cttcggcaac
      181 agctcgatct gggtgatcga tgcggcccct tgccggcggc tggtgccgat gcagtccgat
      241 ccggtgtccc ccccgccgat gaccaccacg tgcttccccg ccgcggagat cgcctccccc
      301 gcggggatcg cgtccccggc gactcgccgg ttctgctgcg tgaggaactc catcgcgaaa
      361 tggatcccct tcaggtccct cccggggacg ggcaggtcgc gcgccgcggt cgccccggcg
      421 gcgaggacga tcgcatcgaa cgatcggcgc aggtacgccg cggagacgtc cacccccgcg
      481 ttgacgctct tctcgaagac caccccctcg gcccgcatct ggtcgagtcg ccggtcgatg
      541 acccacttct cgagcttgaa gtcggggatg ccgtaccgca gaagcccccc gatccggtcc
      601 gacttctcga acaccaccac ctcgtggccg ctgcgcgcga gctgctgggc ggcggggagc
      661 ccggcggggc cggaccctac cacggccacg cgcttgccgg tcgaaaaccc cgccggctcc
      721 ggccggatcc actcctcgcg ccagccgtgc tccacgatct gcagctcgag gtggcggata
      781 gtgaccgcgg ggagattgat cgcaagggtg cacgctgtct cgcacggggc gggacagacc
      841 cggcccgtga tctccggaag gttgcaggtg gcgtgcagca ggtcgagcgc cttccgccag
      901 ttcttccggt agaccatgtc gttccagtcg gggatccggt tcttcacggg gcagccgtag
      961 gcgtggcagt acgggatccc gcaatccatg cagcgcgccg cctggcggta gatcccctcc
     1021 tcaggcagca gctcctcgat ctcccgatag tccccgaccc gctcggtcac cggccggtgc
     1081 gccggttcct cccgatcgta ttccatgaac ccggtcggct taaccacggt agacctcctc
     1141 ggtggcggag acgctctcgg tgttcatctc ctcctccatg cgcatccggt ccagcgactt
     1201 ccggtactcg atcggcatga tcttgacgaa cagggggagg cgggactccc agttctcgag
     1261 gatctgcgcg gcccgctggc ttcccgtgta gcggaagtgg ctttcgatca tggcgtgaag
     1321 gcgctttatg tccccctcct gccagacgct ctccacgtcg accatatcga ggttgcagcg
     1381 ggtgtcgaac agctccgtct cgtcgtagac gtaagcgagc cccccgctca tcccggcggc
     1441 gaagttgttc ccggtcggtc ccagcaccac gacgaccctg ccggtcatgt attcgcaccc
     1501 gtggtcgccg acgccctcca cgacggcctt ccctccgctg ttgcggaccg cgaaccgctc
     1561 cccggcggtc ccgtggaagt acgcctcgcc gcccgtggcg ccgtagagca cgacgtttcc
     1621 gacgatcacg ttcttgtgcg ggaggaaggt cgctccctcc gggggggtga cgacgattcg
     1681 tccccccgac atccccttgc cgaggtagtc gttggcgtcc ccgtgcacgt gcatcgtcac
     1741 gccgggggcc aggaacgccc cgaagctctg ccccgcggag ccgaagaggg tgaggtggat
     1801 cgtgtcgtcg ggcagtcccg ccgccccgta ccggcgggtg atctcgccgg agagcgccgc
     1861 gccgatcgac cggtggacgt tccggatcgg catctcgatc cggaccggct ctttccggtc
     1921 cagggcgctc cgggcgagcg ccatgatctc gtagtcgagg gcttttccga cctcgtgctc
     1981 ctgcggacgc acgcagtgca gcgggctgtg cagcccgttg tcgggcggca ggagaatggc
     2041 ggagaagtcg agccccttcg ccttccagtg ctcgaccgcc ggctggacct ccagcaggtc
     2101 gacccggccc accatctcgt cgagcgtgcg gaagccgagc tccgccatgt attcgcgcag
     2161 ctcctcggag acgaagcgga ggaagcgcac gacgtactcg ggcgcgcctc cgaagcgcgc
     2221 gcgcaggacc gggtcctggg tcgccacccc caccgggcag gtgttcaggt ggcaagcccg
     2281 catcatgatg cacccgaggc tcacgagcac cgccgtgccg aacccgaact cctcggctcc
     2341 catcagcgcc gcgatggcga ggtcccgccc ggtcttcaac tgcccgtcga cctgcacccg
     2401 gatccggtcg cgaagccgat tgtagatcag cgcctgctgg gtctcggcca gtccgagctc
     2461 ccacggcagc cccgtgtgct tgatggaagt gagcggcgag gcgcccgtgc cgccgtcgct
     2521 ccccgcgatg agcacgaggt cggctttcgc ctttgcgacc ccggccgcga ttgtcccgac
     2581 gccgacctcg gagacgagct tcacggagac gttcgcccgc gggttgaccg atttcaggtc
     2641 gtagatgagc tgcgcgagat cctcgatgga gtagatatcg tgatgcggcg gcggcgagat
     2701 gagcgtcacg tacggaaccg tgtggcggat ccgggcgatc tcggggctca ccttatggcc
     2761 ggggagctgc cccccctcgc caggcttggc tccctgcgcc atcttgatct gcagttcgtc
     2821 ggcgttcacg aggtactcgg tcgtcgcccc gaagcgcgcg gaggcgacct gccggatccg
     2881 ggaccgccgg ctgtccccgt tcggaagcgg gatgttccgc tcgggatcct cgccccct
//
LOCUS       DATGYW010000314         1947 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_21145, whole genome shotgun sequence.
ACCESSION   DATGYW010000314 DATGYW010000000
VERSION     DATGYW010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21145"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1370)
                     /locus_tag="VK429_04365"
     CDS             complement(<1..1370)
                     /locus_tag="VK429_04365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012965984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HLN91074.1"
                     /translation="MTSPLSPLFRPSRIAVIGASSNPDKMGFQIFRNIKEAGYAGEIV
                     PVNPKGEVILGVPSVKSAAELPEGTDLAVVIIPAKLVPGTMRELGGRKVKSAIVITGG
                     FAESGEAGAALQEEMTVAARAAGIRVVGPNCQGVNYPYHGVCASWPLITRRGEIAIVS
                     QSGTVGAALIDWASEERLGFSAFVSMGNRSDVDEADLIDFFAEDPHTKVIALYIEGVK
                     DAPKFLSAVRACRKPIVIFKAGRTERGRKAAESHTRSLAGRDEIYDAVFRQNGVHRAD
                     TLEELYDFAKALAYVPPPEGPRMLIVTSSGGSAIIATDVAEEEGLRVVPLSTALSGKL
                     REILPSHCIVGNPLDLTGDTDAARYRNVLDAAEGEFDVVMTIFGDPIPGASDVIRPGR
                     CELVSYLGGADVERAERLLFHERKIAVFPTPERAVKALSCHVRFDRDRFPPSVEGAGQ
                     GDAASGA"
     gene            complement(1504..>1947)
                     /locus_tag="VK429_04370"
     CDS             complement(1504..>1947)
                     /locus_tag="VK429_04370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HLN91075.1"
                     /translation="VDVFPEEPRTNRDPFSSPLQGLPNVILTPHIGGSTEEAQEGIGG
                     FVAARLLEYLSTGSTSTSVNFPAISPSSTPQRHRFAHVHENVPGMLAKINDLFARHGV
                     NIAGQRLETRGRLGYALIDVAQGCEPGIVEELRRIPNTIRARLVY"
BASE COUNT          296 a          666 c          675 g          310 t
ORIGIN      
        1 gcccccgacg ccgcgtcccc ctgccccgcc ccttccacgg agggcgggaa acggtcgcgg
       61 tcgaaccgga cgtggcagga aagggccttc actgcccgct ccggcgtggg gaagacggcg
      121 atcttcctct cgtggaacag cagccgttcc gcgcgctcca catcggcgcc gccgaggtag
      181 gacaccagtt cgcaccgccc ggggcggatc acatcggagg ccccggggat cgggtccccg
      241 aagatcgtca tcaccacgtc gaactccccc tcggccgcgt cgagcacgtt ccggtagcgg
      301 gcggcgtcgg tgtccccggt gagatcgagc gggttgccga cgatgcagtg ggaggggagg
      361 atctcccgga gcttcccgga gagcgccgtg gaaagcggga cgacgcgcag cccttcctcc
      421 tcggccacgt cggtggcgat gatcgcggac ccgccggagc tcgtgacgat cagcattcgc
      481 ggaccctcgg gaggcgggac gtaggcgagg gccttcgcga agtcgtacag ctcctcgagc
      541 gtgtcggcgc ggtgcacgcc gttctgccgg aagacggcgt cgtagatctc gtcgcgcccc
      601 gcgagcgacc gggtgtgcga ctccgccgcc ttgcgccccc gctcggtccg cccggccttg
      661 aagatcacga tgggcttgcg gcaggcgcgg acggcggaga ggaacttcgg ggcgtccttc
      721 accccttcga tgtaaagggc gatcaccttc gtgtgcgggt cctccgcgaa gaaatcgatc
      781 aggtccgcct cgtcgacgtc cgaacggttc cccatgctga cgaaggcgga gaacccgaga
      841 cgctcctccg acgcccagtc gatcagcgcc gcgccgacgg tgccgctttg cgagacgatc
      901 gcgatctccc cccgccgggt gatcagcggc cacgaggcgc acacgccgtg gtacgggtag
      961 ttcacgccct ggcagttggg gccgaccacg cggatgcccg ccgcccgcgc cgccaccgtc
     1021 atctcctcct ggagagcggc tcccgcctcc ccggactcgg cgaacccgcc cgtgatcacg
     1081 atcgccgact tcactttccg tccccccagt tcccgcatcg tcccggggac gagcttcgcc
     1141 gggatgatca cgacggcgag gtcggtcccc tcggggagtt cggcggcgga ttttacggag
     1201 gggacgccca ggatcacctc ccccttcggg ttcacgggga cgatctcgcc ggcgtagccg
     1261 gcctccttga tgttgcggaa gatctggaac cccatcttgt cggggttcga agacgcgccg
     1321 atgacggcga tccgggaggg acgaaacagg ggagacaggg gagaggtcat ccgcgcgctc
     1381 ctcgcttccg gggggtattc gtaacggtag caaagccgga ccccggtgtc acgcgcgtcg
     1441 gggagaccgc cggccgccgg ttgggcgacc tgcaggtcgt tccgcgatgc gatgcgctac
     1501 aagtcagtag acgaggcggg cgcggatcgt gttggggatc cgccggagtt cctccacgat
     1561 cccgggctcg catccctgcg ccacgtcgat cagcgcgtac ccaagtcggc cgcgcgtctc
     1621 gagtcgctgt ccggcgatgt tgacgccatg ccgcgcgaag aggtcgttga tcttcgccag
     1681 catcccgggg acgttctcat ggacgtgggc gaatcggtgg cgctggggag tcgaggaggg
     1741 ggaaatggcc ggaaagttca cgctcgtgga cgtgctcccc gtggacaggt attcgagaag
     1801 ccgcgccgcc acgaatcctc cgatcccctc ctgcgcctcc tcggtcgagc cgccgatgtg
     1861 cggggtcagg atcacgttcg ggagcccctg caatggtgag gagaaggggt ccctgttggt
     1921 ccttggctcc tccggaaata cgtccac
//
LOCUS       DATGYW010000315         1629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_177553, whole genome shotgun sequence.
ACCESSION   DATGYW010000315 DATGYW010000000
VERSION     DATGYW010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177553"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..879
                     /gene="speY"
                     /locus_tag="VK429_04375"
     CDS             <1..879
                     /gene="speY"
                     /locus_tag="VK429_04375"
                     /EC_number="2.5.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011141047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase"
                     /protein_id="HLN91076.1"
                     /translation="WIVSTGANLYHDAHFGLGLSMHAGSPFLDDRVLRDEGVVRIYDV
                     LFDYEVLLDTDAFFRRVLDLPEFQAQMGTAEFHYRLGRYMAQREKTLGQGEVSVLAAA
                     WRYGVPVYTSSPGDSSIGMNVAAMRLGGRGVTFDVSLDVNETAAIVYDAKRRGGKSAV
                     WILGGGSPKNFMLQTEPQIQEVLGLDEKGHDYFLQVTDARPDTGGLSGATPSEAVSWG
                     KVAPDKLPDTVVCYLDSTVALPLLCAFAFDRVGKRTRRRLYDRRAEMLAALGKAYRKA
                     VNAAGVTKKRKVARKK"
     gene            complement(898..1440)
                     /locus_tag="VK429_04380"
     CDS             complement(898..1440)
                     /locus_tag="VK429_04380"
                     /inference="COORDINATES: protein motif:HMM:TIGR00573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HLN91077.1"
                     /translation="MRNPANGDRILEIPYIAADVETTGLSAADGHRVCELALLRFLRG
                     TVIDSFVSLVNPLRPIDPGASAVNGITDEMVAGAPTFADLLPRILDFLADDPLVFHNA
                     PFDLSFLRSEARIAGGSWPGNRVIDTLTLARRARRFRSHSLPDICRELGIGSTFHRAE
                     ADAWAAGKLLLHLVPSDGNP"
     gene            1492..1596
                     /locus_tag="VK429_04385"
                     /pseudo
     CDS             1492..1596
                     /locus_tag="VK429_04385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007294422.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin-type Fe(Cys)4 protein"
BASE COUNT          265 a          520 c          598 g          246 t
ORIGIN      
        1 tggatcgtct cgacgggggc gaacctgtac cacgacgcgc atttcgggct cgggctttcg
       61 atgcacgccg gatccccgtt cctcgacgac cgcgtcctgc gggacgaggg ggtcgtccgg
      121 atctacgacg tcctgttcga ctacgaggtg ctcctcgaca cggatgcctt cttccgccgg
      181 gtgctggacc tgccggagtt ccaggcgcag atggggacgg cggagttcca ttaccggctc
      241 gggcggtaca tggcgcagcg ggaaaagacc ctcggccagg gggaggtgag cgtgctggcg
      301 gccgcgtggc ggtacggggt ccccgtctac acgtcgtccc cgggggattc ctccatcggg
      361 atgaacgtcg ccgcgatgcg cctcgggggc cgcggtgtga cgttcgacgt ctccctcgac
      421 gtgaacgaga cggcggcgat cgtctacgac gcgaaacgcc gcggggggaa aagcgcggtc
      481 tggatcctcg gcggcgggtc gccgaagaac ttcatgctcc agaccgagcc gcagatccag
      541 gaggtcctcg ggctcgacga aaaggggcac gactacttcc tgcaggtcac cgacgcccgg
      601 cccgacacgg gcggactgtc cggcgcgacg ccctcggagg cggtctcgtg ggggaaggtg
      661 gccccggaca agctccccga cacggtggtc tgttacctcg actccaccgt ggcgctcccg
      721 ctcctttgcg ccttcgcgtt cgaccgggtg ggaaagcgga cccgcaggcg cctctacgac
      781 cgccgggcgg agatgctggc ggccctgggg aaggcgtacc ggaaggcggt gaacgccgcc
      841 ggggtgacga agaagcggaa ggtcgcgcgg aagaagtagc cggacgtcgg cgcctgttca
      901 gggattcccg tccgacggga caagatgcag cagcagtttc cccgcggccc aggcgtcggc
      961 ttccgcccgg tggaaggtgg agccgatgcc aagctccctg cagatgtccg ggagggagtg
     1021 ggagcggaag cgccgggccc ggcgggccag cgtcaacgtg tcgatcaccc ggttcccggg
     1081 ccacgatccc cctgcgatcc gcgcctcgct ccgaaggaac gacaggtcga acggcgcgtt
     1141 gtggaagacg agcgggtcgt cggcgaggaa gtcgaggatc cgggggagaa ggtcggcgaa
     1201 ggtgggggcg ccggccacca tttcgtcggt gatcccgttc accgccgacg cgccggggtc
     1261 gatggggcgc aggggattca ccagcgacac gaaggagtcg atcaccgtcc cccgcaggaa
     1321 gcggagcagg gcgagctcgc agacccggtg gccgtcggcc gcggaaagtc ccgtggtctc
     1381 cacgtccgcc gcgatgtacg ggatctcgag gatgcggtct ccgttggccg ggttcctcaa
     1441 cgttcccccc tgaggtagaa tacgggcaca tcatcccaca ggagtccacc gatgaaaaag
     1501 tggaagtgca ccgtctgcgg ctacatccac cagggggacg atccccctgc ttcctgcccc
     1561 atctgcgggg cgttccgcga gaagttcgtc cagatttgat gccgggcggc ccggggaagg
     1621 ttgcgctgg
//
LOCUS       DATGYW010000316         1873 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_457235, whole genome shotgun sequence.
ACCESSION   DATGYW010000316 DATGYW010000000
VERSION     DATGYW010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1873
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_457235"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..173
                     /locus_tag="VK429_04390"
     CDS             <1..173
                     /locus_tag="VK429_04390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017317236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HLN91078.1"
                     /translation="MRKGGVDWQFVTYGGAVHRFTNPEAGSDNSKGTAYNERADRRSW
                     EAMKAFFAETLK"
     gene            276..1412
                     /locus_tag="VK429_04395"
     CDS             276..1412
                     /locus_tag="VK429_04395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014452737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN91079.1"
                     /translation="MKRAILVLAFLFPALVAIVPSHAKEIKIGLITPLSGDVKTYGES
                     VRNSFLIAVEEANAKGGVAGMKITYVIQDDKNDATEAANVANLLVNQYRVKAIVGAVT
                     SKATIPVSDIIQAAKIPTLTPTATNPKVTVADGKRKDYMFRSCFIDPFQGMVMAKFSR
                     ETLKKTRAAVLFDASNDYSKGTAEVFRDGFRKMGGTLSAFEAYGKDDVDFSALLTKVK
                     ASDADVLFLPDYYNKVGLIAKQAQEKGLKVQLVGPDGWDSPDLVKIAGSAIEGGYFSN
                     HYSPDDRRPEVVAWVKKYREKHGQVPDALGTLAYDGTKLLLEAIRKAGSDDPRQIRDA
                     LASIRDFHGVTGKSTLDRNGDSVKSAAIVKIEGGRQKFVKMVNP"
     gene            1448..>1873
                     /locus_tag="VK429_04400"
     CDS             1448..>1873
                     /locus_tag="VK429_04400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011928156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN91080.1"
                     /translation="MNGLQLGFVYALIALGYTMVYGIVRLINFAHGDVFMVGAFLAFY
                     SVEKYHLPLPAVFAIAAGGSALLAVVIERMAYRPLRNAPKIAALITAIGVSLFLEYFT
                     ALHQVFGPNYYAFPRPFQVVSLEIGGIAFTNIQGIILVAT"
BASE COUNT          380 a          574 c          603 g          316 t
ORIGIN      
        1 agatgcgcaa ggggggagtg gactggcagt tcgtgaccta cggcggagcc gtccacagat
       61 tcaccaatcc cgaggcgggg agcgacaact cgaaggggac ggcgtacaac gagcgggcgg
      121 accgccggtc gtgggaagcg atgaaggcct tcttcgcgga aaccctcaaa tgaaagggga
      181 tacgcacccc ggggcgattc ttcgggtaca atgacccccg gggtgcaccc cccaccccgc
      241 cacacccatc ctccctcgta ccgaaaggag gaacgatgaa gcgcgcaatc ctcgtactcg
      301 cctttctttt tccggcgctg gtggcgatcg ttccctccca cgcgaaagag atcaagatcg
      361 gcctgatcac gccgctatcc ggcgacgtca agacgtacgg cgagtcggtc cggaactcct
      421 tcctgatcgc cgtcgaggag gcgaacgcga agggcggcgt cgcggggatg aaaatcacgt
      481 acgtcatcca ggacgacaag aacgacgcca cggaggcggc gaacgtggcg aacctcctcg
      541 tgaaccagta ccgggtgaag gcgatcgtcg gtgcggtcac ctccaaggcg acgatccccg
      601 tctcggacat catacaagcc gcgaagattc cgacgctcac cccgacggcc acgaacccga
      661 aggtcacggt ggcggacggg aagcggaagg actacatgtt ccggagttgc ttcatcgacc
      721 ccttccaggg gatggtgatg gccaaattct cacgcgagac gctgaagaag acacgcgccg
      781 cggtcctgtt cgacgcgtcg aacgactact cgaaagggac cgccgaggtg ttccgcgatg
      841 gcttccggaa aatgggcggg acgttgtctg ccttcgaggc atacgggaag gacgacgtcg
      901 atttttcggc gctcctgacg aaagtgaagg cctcggacgc cgacgtcctc ttcctgccgg
      961 actactataa caaggttggc ctgatcgcca agcaggcgca ggagaaggga ctgaaggttc
     1021 agctggtcgg gccggacggc tgggactctc cggatctcgt gaagatcgcc gggagcgcga
     1081 tcgagggcgg ctacttctcc aaccactact ctccggacga ccggcggccg gaggtcgtgg
     1141 catgggtgaa gaagtacagg gagaagcacg gacaggttcc cgatgccctc gggacgctgg
     1201 cgtatgacgg cacgaaactg ctcctcgagg cgatccggaa ggcagggagc gacgacccga
     1261 ggcagatccg ggatgccctc gcctcgatca gggatttcca cggagtcacc gggaaatcca
     1321 cgctcgaccg gaacggcgac agcgtcaaga gcgcggcgat cgtgaagatc gagggggggc
     1381 ggcagaagtt cgtgaagatg gtgaacccgt agggggggga gccgtagagt attttctcca
     1441 gcaggcgctg aacggcctac aactcggctt cgtgtatgcc ctgatcgcgc tggggtacac
     1501 gatggtgtac ggaatcgtgc gcctcatcaa cttcgcccac ggcgacgtct tcatggtcgg
     1561 ggcgttccta gcgttctact ccgtcgagaa atatcacctg cccctccccg ccgtgtttgc
     1621 gattgccgcg ggagggtccg cccttctcgc cgtcgtcatc gagcggatgg cgtaccggcc
     1681 gctgcgaaac gctccgaaga tcgcggcgct gatcaccgcc atcggcgtct ccctgttcct
     1741 ggaatatttc accgcgctcc accaggtctt cggaccgaac tattacgcct tcccgcgtcc
     1801 cttccaggtg gtgtccctgg agatcggcgg gattgcgttc accaacatcc aggggatcat
     1861 cctcgtcgcc aca
//
LOCUS       DATGYW010000317         1624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_177749, whole genome shotgun sequence.
ACCESSION   DATGYW010000317 DATGYW010000000
VERSION     DATGYW010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177749"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..955)
                     /locus_tag="VK429_04405"
     CDS             complement(2..955)
                     /locus_tag="VK429_04405"
                     /inference="COORDINATES: protein motif:HMM:NF013316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase U32 family protein"
                     /protein_id="HLN91081.1"
                     /translation="MAELLASGGSMEMVRAAFDNGADAVYVGATGWSRRRAQYEMDDV
                     AIVEAARYARSAGKILRVAFNTLPASSEVPLFLARTDALYAAGVRDFILTDPGLMMAL
                     KNRHPDTILHASVGCTIINVQDALFYKEAGASQVVAECRMGKETMRRIKAEAGVGLEI
                     LVHATTCYTLLGRCTMSSYTKHGHRVDASGKDHFPGSPNRGGLCYRICLSDWDQVGAS
                     GEIEASGVALPNRAYFLADDIPDLIDLGVDTIKIQGREYSVPLVGRMVRFYRELIDAC
                     VHDRAGFRMDPWRERMARIVADRDAERSEKTAGLISESLDR"
     gene            complement(1010..>1624)
                     /locus_tag="VK429_04410"
     CDS             complement(1010..>1624)
                     /locus_tag="VK429_04410"
                     /inference="COORDINATES: protein motif:HMM:NF013316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HLN91082.1"
                     /translation="GGPVPAHMGAYANVYTHLAAGVMRDAGAVRVRPNAEVSLEEMAI
                     LSRDAGVEVEVLVHGKIPLGVTDRCFLLTEPEESDPKCPSACGEVHWLTSRQWVLKTV
                     GKGVLSGRDMCLLEHLPRLVAGGFRVFRVEGLYETAAYRSEIGVAYREALARAFSGGE
                     YTIEDRWADTARRHAPRGLCNGYCFGTAGRTYIGTVLQDANPEV"
BASE COUNT          257 a          569 c          544 g          254 t
ORIGIN      
        1 gttaccggtc gagagattcg gagatcaggc ccgcggtctt ttcactgcgc tcggcgtccc
       61 ggtcggccac gatgcgggcc atccgctccc gccacggatc catccggaac ccggcgcggt
      121 cgtgcacgca ggcgtcgatg agctcgcggt agaaccggac catccgtccc accagcggca
      181 cggagtactc cctgccctgg atcttgatcg tgtcgacacc gaggtcgatc aggtcgggaa
      241 tgtcgtcggc gaggaagtag gcccggttcg gcagcgccac gcccgacgcc tcgatctccc
      301 cggacgcgcc cacctggtcc cagtcggaga gacagatccg gtagcagagg ccgccgcggt
      361 tcgggcttcc ggggaaatgg tccttccccg atgcatccac ccggtgcccg tgcttcgtgt
      421 agctgctcat cgtgcagcgg ccaaggagcg tgtagcaggt ggtggcgtgg acgaggatct
      481 cgagcccgac ccctgcctcc gccttgatcc tgcgcatcgt ctccttcccc atgcggcact
      541 cggcgaccac ctgggaggcg cccgcctcct tgtagaagag ggcgtcctgg acgttgatga
      601 tggtgcaccc gacgctcgcg tgcaggatcg tgtcggggtg gcggtttttc agggccatca
      661 tcagcccggg gtcggtgagg atgaagtcgc gcacgccggc ggcgtacagc gcgtcggtcc
      721 gcgccaggaa gagcgggacc tcggaggagg ccgggagggt gttgaacgcc acccggagga
      781 tcttgccggc cgaacgggcg tatcgcgccg cctcgacgat cgcgacgtcg tccatctcgt
      841 actgcgcccg gcggcggctc caccccgtag cgccgacata gacggcgtcc gccccgttgt
      901 cgaaggcggc ccgcaccatc tccatcgaac cgccggatgc caacagctcg gccatcgacg
      961 tcactcctcc gtgcgcggat cccgttcgtg gggaagacgc aaaaatgaat tatacctcag
     1021 ggttagcgtc ctgtaaaacc gtcccgatgt acgttcgtcc ggctgtcccg aagcagtacc
     1081 cgttgcacag gccccgggga gcatggcgcc tcgcggtatc ggcccaccga tcctcgattg
     1141 tgtactcccc cccggagaag gcgcgggcca acgcctcccg gtaggcaacg ccgatctccg
     1201 accggtacgc cgcggtctcg tagagcccct cgacccggaa gacgcggaag ccgcccgcga
     1261 ccagacgcgg aaggtgctcc agcaggcaca tgtcccggcc cgagaggacc cccttcccga
     1321 ccgtcttcag gacccactga cgggaggtga gccagtggac ctccccgcag gcggacgggc
     1381 acttcgggtc ggactcctcg ggttccgtga gcaggaagca gcggtcggtg accccgagag
     1441 ggatctttcc gtggacgagc acctcgacct cgaccccggc gtcgcgggag aggatcgcca
     1501 tctcctcgag ggacacctcg gcgttggggc gcacccggac cgcccccgcg tcgcgcatga
     1561 cgccggcggc gaggtgggtg tagacgttcg cgtaggcgcc catgtgggcc ggaaccggcc
     1621 cccc
//
LOCUS       DATGYW010000318         1587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_403251, whole genome shotgun sequence.
ACCESSION   DATGYW010000318 DATGYW010000000
VERSION     DATGYW010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403251"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1396
                     /gene="metG"
                     /locus_tag="VK429_04415"
     CDS             <1..1396
                     /gene="metG"
                     /locus_tag="VK429_04415"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF008900.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HLN91083.1"
                     /translation="GTDEHGEKVQKTAAAKGLSPRELADQVVTNFQGLTPALTISNTG
                     FIRTTEPRHYASVQDLFRKSLDNGDIYLGEYEGWYCVPDEAYWTALQLADGNCPTCGR
                     PVEKRKEPSYFFRLSKYQEPLLDYYRKHPAFIRPESRRNEVVAFVEGGLNDLSVSRTS
                     LSWGIPVPEAPGHVIYVWYDALTNYITGLGYPTPTAEFGTFWPADIHMVGKDILRFHA
                     VYWPAFLMSAGIAPPLGVFAHGWWTVEGQKMSKSLGNVVDPYEMVRKYGADAFRYFLL
                     REVSFGLDGDFSERELIKRANSELADKLGNLLNRSLGMLGKYFDGVVPAPGPPEPEDA
                     VLSACGRESVPAVAAAMDEVAFHKALAAIIELVTKGNEYVQSTQPWALAKDPARRARL
                     GTVLYNALEASRLAALLMAPFTPTAAQKLWEALVPGGGPLENARIDREGAWGGLAAGV
                     PLPKACIVFPKIEI"
BASE COUNT          269 a          542 c          543 g          233 t
ORIGIN      
        1 gggaacggat gagcacggcg agaaggtgca aaagaccgcg gcggcgaaag gcctctcccc
       61 ccgcgagctc gccgaccagg tcgtgaccaa cttccagggc ctcaccccgg ccctgacgat
      121 cagcaacacc ggcttcatcc gcaccacgga gccgaggcac tacgcctccg tgcaggacct
      181 cttccgcaag tcgctcgaca acggcgacat ctacctgggc gagtacgagg gatggtactg
      241 cgtccccgac gaggcgtact ggacggcgct ccagcttgcg gacgggaatt gcccgacgtg
      301 cggccgcccc gtggagaagc ggaaggagcc ttcctacttc ttccgcctgt cgaagtacca
      361 ggaaccgctc ctcgactact accggaagca cccggccttc atccggccgg agagccgccg
      421 caacgaagtg gtcgccttcg tcgagggggg cctgaacgac ctgtccgtct cccgcacgtc
      481 gctctcctgg gggatcccgg tgcccgaggc gccgggacac gtgatctacg tctggtacga
      541 cgccctgacc aactacatca ccgggctggg gtacccgacc cccacggcgg agttcgggac
      601 gttctggccg gccgacatcc acatggtggg gaaggacatc ctccggttcc acgccgtcta
      661 ctggcccgcg ttcctcatgt ccgccggaat cgcaccgccg ctcggggtgt tcgcccacgg
      721 atggtggacc gtcgagggac agaagatgag caagtcgctg gggaacgtcg tcgacccgta
      781 cgagatggtg cggaaatacg gcgcggacgc gttccgctac ttcctgctgc gcgaggtctc
      841 cttcgggctg gacggcgact tctcggagag ggagctgatc aagcgcgcaa actcggaact
      901 cgccgacaag ctggggaacc tgctgaaccg gtcgctcggg atgctcggga agtatttcga
      961 cggcgtcgtc cccgcgccgg gtccccccga acccgaggac gcagtcctgt cggcctgcgg
     1021 gcgcgagagc gtgccggccg tggccgctgc gatggacgag gtggcgttcc acaaggcgct
     1081 cgcggcgatc atcgagctcg tcacgaaggg gaacgaatac gtgcagtcga cgcagccgtg
     1141 ggcgctggcg aaggacccgg caaggcgcgc ccggctgggg acggttctct acaacgccct
     1201 cgaggcgtcc cggctggccg cgctgctcat ggccccgttt accccgaccg cggcgcagaa
     1261 gctgtgggaa gctctcgtcc ccgggggcgg ccccctggaa aacgcgcgga tcgaccggga
     1321 aggcgcgtgg ggagggctcg cggcgggcgt ccccctcccg aaggcgtgca tcgtcttccc
     1381 caaaatcgaa atttgagccg tccgtagcct cccgccacca ccggatgttc ttcgacaccc
     1441 acgcgcacct ggatctttcg ccgcttcgcg aggcggagga ggcggtggtg caacgggcgc
     1501 gcgacgcggg ggttacacgg atcgcaacgg tcggcatcga cccggagagc ggcgagcggg
     1561 cggtggcgat cgcccaccgg cacacgg
//
LOCUS       DATGYW010000319         1703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_296735, whole genome shotgun sequence.
ACCESSION   DATGYW010000319 DATGYW010000000
VERSION     DATGYW010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296735"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..407
                     /locus_tag="VK429_04420"
     CDS             <1..407
                     /locus_tag="VK429_04420"
                     /inference="COORDINATES: protein motif:HMM:NF018184.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HLN91084.1"
                     /translation="AVDTAFGRLYDKAMESRLMFREPAIGVRHGEVRIPDAFRSEYHV
                     LFPLNEDPGVEIPGAGIVDLPGAEVASFIHRGPYEWIQCTYEMVVDWLRENRYEAAGE
                     AREVFFVAPEPHSGGSQDDMLTEIQIPIRSAA"
     gene            436..1563
                     /gene="selD"
                     /locus_tag="VK429_04425"
     CDS             436..1563
                     /gene="selD"
                     /locus_tag="VK429_04425"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012871322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:487..489,aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HLN91085.1"
                     /translation="MSDREKIFLTHLSSCAGUASKLGQGVLARVLSALPPPDDPRVLV
                     GTSHADDAGVFRLSGEEALIGTLDFFTPIVDDPYLYGSIAAANSLSDVYAMGGEPLFA
                     LAIAAFPEDEKILPYLADVMAGAADKAKEAGICIIGGHTIKDKEPKFGLSVTGRVHPD
                     RMWHNRGAKAGDAIVLTKPIGTGIATSAIKWGICPKETEEAVTGSMARLNANASKAGR
                     QVGISTATDVTGFGLIGHLLEVLEGSGLAAEIRRQDVPVFPGVRELMRRKRVDALTGA
                     RRFPGSEWVHATFGGHPIPGGTHQNMAHQVGRVRLAPLLPVEEAYLLSDPQTSGGLLM
                     FVPEAQAEALCDALRAAGEGAWRIGRTLEAGDLEMQRITVI"
BASE COUNT          262 a          564 c          620 g          257 t
ORIGIN      
        1 gggccgtcga caccgccttc ggacggctct acgacaaggc gatggagagt cgtttgatgt
       61 tccgcgagcc ggccatcgga gtgcgccacg gggaggtccg gatccccgac gccttccgct
      121 ccgaatacca cgttctcttc cccctgaacg aggatccggg ggtggaaata ccgggcgccg
      181 ggatcgtcga cctgcccggg gcggaggtgg catccttcat ccatcggggc ccctacgagt
      241 ggatccagtg cacctatgaa atggtggtag actggctccg ggagaaccgg tacgaagccg
      301 cgggggaggc ccgcgaggtc ttcttcgtgg cgccggagcc gcactccggg gggagccagg
      361 acgacatgct gaccgagatc cagatcccca tccgctccgc ggcgtaaacc ggcttcccgg
      421 agggatgggg gaggcgtgag cgatcgggag aagatcttcc tgacccacct gtcgtcctgc
      481 gccggttgag cgtccaagct ggggcagggg gtccttgccc gcgtgctgtc cgccttgccg
      541 ccgcccgacg atccacgtgt gctcgtgggc acctcgcacg ccgacgacgc cggggtgttt
      601 cgcctttcgg gggaagaggc cctcatcggc accctcgatt tcttcacgcc gatcgtggac
      661 gatccgtacc tgtacggttc gatcgcggcc gccaactccc tgagcgacgt gtacgcgatg
      721 gggggggagc cgctcttcgc cctcgccatc gccgccttcc ccgaggacga gaagatcctg
      781 ccgtacctcg cggacgtgat ggccggcgcc gccgacaagg cgaaggaggc cggcatctgc
      841 atcatcgggg ggcacacgat caaggacaag gagcccaagt tcggcctctc tgtgacaggc
      901 cgggtccacc ccgaccggat gtggcacaac cggggcgcga aggccggcga cgccatcgtc
      961 ctgacgaagc ccattgggac cggcatcgcc acctcggcga tcaagtgggg gatctgcccg
     1021 aaggagacgg aagaggcggt gaccgggtcg atggcccggc tgaacgccaa tgcttcgaaa
     1081 gcggggcggc aggtcgggat ctccacggcc accgacgtga ccggattcgg cctgatcggg
     1141 cacctgctgg aggtgctgga ggggagcggg ctggcggccg agatccggcg gcaggacgtt
     1201 ccggtcttcc ccggggtgcg ggagctgatg cggcgcaagc gcgtcgacgc cctgaccggc
     1261 gcgcgccggt tcccgggatc ggagtgggtc cacgcgacat tcggcgggca cccgattccc
     1321 ggggggacgc accagaacat ggcgcaccag gtcgggcgcg tccgcctcgc ccccttgctg
     1381 ccggtggagg aggcgtacct cctgtccgac ccgcagacct cgggggggct cctgatgttc
     1441 gtccccgagg cgcaggcgga agccctgtgc gacgccctgc gcgcggcggg cgagggcgcg
     1501 tggaggatcg gccgaacgct cgaagcgggc gacctcgaga tgcagcggat cacggttatc
     1561 tgaggtgacg gcgtgaacat cctgctcccg gtatccctcg gcgcctcgtt cgacgacgcc
     1621 gtgcggctgg cgatcgacac cgcgaaggcg cacgccggcc gggtccgcgt cctttccgtg
     1681 gtggacgcgg cggagatccg ccg
//
LOCUS       DATGYW010000320         1622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_296823, whole genome shotgun sequence.
ACCESSION   DATGYW010000320 DATGYW010000000
VERSION     DATGYW010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296823"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..615
                     /locus_tag="VK429_04430"
     CDS             <1..615
                     /locus_tag="VK429_04430"
                     /inference="COORDINATES: protein motif:HMM:NF013353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036361 - racemase activity, acting on
                     amino acids and derivatives [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HLN91086.1"
                     /translation="IRIRDIKLLVVACNTASSLALPVLRKIYKIPVVGMVDPCVRRAA
                     ALPDKRTIGVIGTLGTVRSGAYEEALRLSVPSARVRSIPCPLLVSLAEEGWTENAITR
                     AVIAEYLAPFLEDPPDALILGCTHYPVLKGPIRDYLGGGTVLIDSAEEAARVVDILLS
                     ETQVRRTGTPGGVEFLVTDDPERFGRVGKGFFGRELHDVGRVAL"
     gene            623..958
                     /locus_tag="VK429_04435"
     CDS             623..958
                     /locus_tag="VK429_04435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91087.1"
                     /translation="MRETNREERGEGAMGGQQMKMLSGFNHNIRFRGKVYHVQTEDGG
                     KDNPQIITHAFQGGAILDSVRTSYEDLLGLPNWQSDLKDRMKAQHLEEIRRLMAGDIV
                     PPEGDPGDR"
     gene            955..>1622
                     /locus_tag="VK429_04440"
     CDS             955..>1622
                     /locus_tag="VK429_04440"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91088.1"
                     /translation="MIEGFRLGVFSRGTTLWDGLDFAFGDAAAWFVTGPPSSGKTLLF
                     SILRGERRPDAGDVLVSGESLYRGNAALARAWRASCGHVAEQTIAGAPLTVRDLFRRS
                     ALAGGGMRDSELKVRTDRLLEMVDLQGASGWRIAELSISERGRACLAAELLRGPKVLF
                     CDGLVAGAGVPFWEMLWGLFRALAREGCTVILVERRIPERWALAAGNPKPVGPFRVYR
                     LPGTA"
BASE COUNT          245 a          510 c          592 g          275 t
ORIGIN      
        1 atccggatcc gcgacatcaa gctcctcgtg gtggcgtgca acaccgcatc gtccctcgcc
       61 cttcccgtcc ttcggaagat ctacaagatc cccgtggtgg gaatggtgga cccgtgcgtg
      121 cggcgcgccg ccgccctgcc cgataagcgg acgatcggcg tcatcgggac gctcgggacg
      181 gttcgttccg gggcgtatga agaggcgctg cggctctccg ttccatcggc ccgggtccgg
      241 tcgatcccgt gtccgctgct cgtctccctc gcggaggagg ggtggaccga aaacgcgatc
      301 acgcgcgccg tgatcgcgga atacctcgcc ccgtttctcg aggatccccc cgacgcgctg
      361 atcctcgggt gcacccatta ccccgtgctg aaagggccga tccgcgatta cctcggggga
      421 ggcaccgtcc tgatcgactc ggccgaggag gcggcgcggg tagtcgacat cctgctctcc
      481 gagacgcagg tccgccggac aggtaccccg gggggggtcg agttccttgt aacggacgac
      541 ccggagcggt tcgggcgggt ggggaaggga tttttcggac gggagttgca cgacgtgggc
      601 cgcgtggccc tgtagcgggt cgatgcgcga aacgaaccgg gaggaaagag gcgaaggggc
      661 gatgggcgga cagcagatga agatgctctc gggattcaac cacaacatcc ggttccgggg
      721 aaaggtgtac cacgtccaga cggaggacgg ggggaaggac aacccgcaga tcatcacgca
      781 cgcgttccag ggcggggcga tcctcgacag cgtccgcacg tcgtacgagg acctgctcgg
      841 gctgccgaac tggcagtccg acctcaagga ccggatgaaa gcccagcatc tcgaggagat
      901 ccggcggctg atggccgggg atatcgtgcc tcccgaaggg gaccccgggg accgatgatc
      961 gaggggttcc gactgggggt cttctcccgg gggacgaccc tctgggacgg actcgacttc
     1021 gcgttcgggg acgccgcggc gtggttcgtc acgggaccgc cgtcgtcggg gaagacgctt
     1081 ctgttttcca tcctccgcgg ggagcgcagg ccggatgccg gggacgttct cgtctccggg
     1141 gagtccctgt accgcgggaa cgccgctctc gcccgcgcct ggcgagcatc ctgcggccat
     1201 gttgcggaac aaacgatcgc cggcgcgcct ctgaccgtac gggatctctt tcgccgctcc
     1261 gcccttgccg gtggcggcat gcgggatagc gaactgaagg tgcgcacgga tcgcctcctc
     1321 gagatggtcg acctgcaagg cgcgtcgggg tggaggatcg cggagctgtc gatctccgag
     1381 cggggacggg cgtgcctggc cgcggagctc ctgcgcggtc cgaaggtcct gttctgcgac
     1441 ggcctggtcg cgggtgcggg ggttccgttc tgggagatgc tctggggatt gttccgcgcc
     1501 ctggcccggg aagggtgcac ggttattctc gtggagcgca ggatcccgga gcggtgggcc
     1561 ttggccgccg ggaatccgaa gcccgttggc cctttccgtg tataccgcct tcccggtacg
     1621 gc
//
LOCUS       DATGYW010000321         1582 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_296856, whole genome shotgun sequence.
ACCESSION   DATGYW010000321 DATGYW010000000
VERSION     DATGYW010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1582)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296856"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1090
                     /locus_tag="VK429_04445"
     CDS             <1..1090
                     /locus_tag="VK429_04445"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HLN91089.1"
                     /translation="YDAVTQGVRRMEESNRYKGLQGALLCMDPGTGGVLAMVGGVDFA
                     ASQFNRALQARRQPGSAFKPIIYSAALDKGKTVVSTVDDSPIEFTRSETEMWKPKNYD
                     GTFLGPIPLLEALAKSRNLATVRLLNEIGVDTAIRMARNLGIQSPIERNLSIALGSSG
                     VTPLEMVTAYSTFAAGGQRPTPFFIREVQDGKGRVLERTDPRFVQAVAPETAYLTIRL
                     MQEVLRTGTGASAKGLSPNLAGKTGTTNENTDAWFIGGSPDLIAGVWVGFDTPASLGG
                     RQTAASVALPIWTQFIGRALSHVPAREFPAPAGITFARVDPATGKALPPGSGEGMTLP
                     FKLGTVPETGDPAGKPSSPRRGPGDDLL"
     gene            complement(1156..>1582)
                     /locus_tag="VK429_04450"
     CDS             complement(1156..>1582)
                     /locus_tag="VK429_04450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91090.1"
                     /translation="FDACLSLFTSFGYFCDEENQRVIANVARSLKENGAFLLDLRNAQ
                     KGLSGDEDMEKTMAVPSGVLSMRVRFDRTTRRARAEHTLLRSDGIRISSAFDVRIYSE
                     EELTDMLCRAGMRVAAVLGSLDGAPFTSGAERMVVIARR"
BASE COUNT          271 a          532 c          553 g          226 t
ORIGIN      
        1 gtacgacgcc gtgacgcagg gcgttcgccg gatggaggag tcgaacaggt acaaggggct
       61 gcagggagcg ctgctgtgca tggatcccgg cacgggaggg gtcctcgcga tggtgggcgg
      121 cgtcgacttc gccgcgtcgc agttcaaccg ggcgctccag gcgaggcggc agccgggctc
      181 cgccttcaag ccgatcatct acagcgccgc ccttgacaag gggaaaacgg tggtctccac
      241 ggtcgacgac tcgccgatcg agttcacgag gagcgagacg gagatgtgga agccgaagaa
      301 ttacgacggg acgttcctcg gccccatccc gctgctcgag gcgctggcca agtcccgcaa
      361 cctggcgacc gtccgcctgc tgaacgagat cggtgtggac acggcgatcc ggatggcgcg
      421 gaacctcggc atccagtcgc ccatcgagcg gaacctctcc atcgccctcg ggtcgtccgg
      481 cgtgacgccc ctcgagatgg tcaccgcgta ctcgaccttc gccgccggcg gacagcggcc
      541 gacgccgttc ttcatccggg aggtgcagga cggaaagggg cgcgtgctgg agcggaccga
      601 ccccaggttc gtgcaggcgg tcgccccgga gaccgcctat ctcaccatcc ggctcatgca
      661 ggaagttctt cgcaccggta ccggcgcctc ggccaagggg ctctcgccga atctcgccgg
      721 taagacgggg acgacgaacg agaacacgga cgcctggttc atcggcgggt cgccggacct
      781 gatcgcgggg gtgtgggtgg gcttcgacac gccggcgtcg ctgggggggc gccagacggc
      841 ggcctccgtg gcgctgccga tctggacgca attcatcggg cgtgcgctca gccacgttcc
      901 cgcccgggag ttccccgccc ccgcggggat caccttcgcc cgcgtcgacc cggcgacggg
      961 caaggccctc ccgccgggaa gcggcgaggg gatgacgctc cccttcaaat tgggcacggt
     1021 gccggagacc ggcgaccccg ccgggaaacc ctcctcaccc cgccggggac cgggcgacga
     1081 cctgctgtaa ttgccggcac cgaaaacggg gtgttggcag gaaggaatgc cgcggcctga
     1141 agaagggcgg gggaatcacc gccgggcgat cacgaccatc cgctccgcgc cggaggtgaa
     1201 gggggcgccg tcgagggaac cgaggacggc cgcgacgcgc atccccgcgc ggcaaagcat
     1261 atccgtcaat tcctcttccg agtatatccg gacatcgaag gcggaagaga tgcggatccc
     1321 gtccgaccgc aggagcgtgt gctccgcccg ggcgcgccgg gtggtccggt cgaatcggac
     1381 gcgcatggac agcactcccg agggaaccgc catcgtcttc tccatgtctt catcgcccga
     1441 gagccccttc tgggcgttcc gcaggtcgag caggaacgcc ccgttctcct tcaggctgcg
     1501 cgccacgttc gcgatcacac gctggttttc ctcgtcgcag aaataaccga acgaggtgaa
     1561 gagggagaga cacgcgtcga ac
//
LOCUS       DATGYW010000322         1614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_21598, whole genome shotgun sequence.
ACCESSION   DATGYW010000322 DATGYW010000000
VERSION     DATGYW010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21598"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1553)
                     /locus_tag="VK429_04455"
     CDS             complement(<1..1553)
                     /locus_tag="VK429_04455"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HLN91091.1"
                     /translation="MKDKSPREEARRAEDLARWTTPVAGMTCASCVGRVERALRKLPG
                     VLTASVNLAAQTASVEYLPGIASVADLRAAVEGAGYSVPEVTPGEDPLARQERVQREE
                     ERALLTRLRVGLVLGVPLLLLSHWEMIAGHGSLPFARSTLALLQFLLATPIQFYVGAR
                     FYRGAWVVGRHGSTDMNTLVALGTSVAYLYSAIAAFFPSLVSAEGLVVHLYFETSAAI
                     LVLVLLGRYFESRARGKTSEAVKKLIGLAPKTARVVRGRAEVDVPLESVVVGERVVVR
                     PGEKVPVDGTVAEGRSAVDESMLTGEPIPVEKAPGGAVTGGTMNLDGRLLFTATRVGK
                     DTVLSRIVAIVREAQGSKPPIGRLADVIASYFVPAVMAAAALTFLAWFFLGPEPRGTY
                     AMVNMISVLIIACPCAMGLATPTSIMVATGKGAELGILVRDGAALETAQKVDTIVLDK
                     TGTVTKGKPELGEVRLAPGGAFRGDEGERELLRLAASAESGSGHPLADAILRGAKGRR
                     IEVAAPEAFL"
BASE COUNT          266 a          600 c          527 g          221 t
ORIGIN      
        1 aggaacgcct ccggcgcggc gacctcgatc ctccggccct tcgccccccg caggattgca
       61 tccgccagcg ggtgcccgga gccgctttcc gcggaggccg cgaggcggag aagctcccgc
      121 tccccctcgt ccccccggaa cgcgcctccc ggggcaagcc gcacctcccc cagctccggc
      181 ttccccttcg tcacggtgcc ggtcttgtcg aggacgatcg tgtccacctt ctgcgcggtc
      241 tccagcgcgg cgccgtcccg aacgaggatc ccgagctccg cccccttccc ggtggcgacc
      301 atgatcgagg tgggcgtggc gagccccatc gcgcacgggc aggcgatgat caggacggag
      361 atcatgttga ccatcgcgta cgttccccgc ggctcgggtc cgaggaagaa ccacgcgagg
      421 aacgtgaggg ccgccgccgc catcaccgcg gggacgaaat acgacgcgat cacgtccgcg
      481 agccgcccga tcggcggctt gctcccctgc gcctcccgca cgatcgcgac gatccgcgag
      541 aggacggtgt ccttccccac gcgggtcgcc gtgaagagga gccgcccgtc gaggttcatc
      601 gtcccgcccg tcaccgcgcc gcccggcgcc ttctcgaccg ggatcggctc cccggtgagc
      661 atcgactcgt cgaccgccga gcggccctcc gcgaccgtcc cgtcgaccgg caccttctcc
      721 cccggccgga ccaccacgcg ctccccgacg acgaccgact cgagggggac gtccacctcg
      781 gccctgccgc gcacgacccg ggcggtcttc ggcgccagcc cgatcagttt cttcaccgct
      841 tcggacgtct tcccccgcgc ccgggactcg aagtatcgcc ccagcaggac gaggacgagg
      901 atcgccgcgg acgtctcgaa gtacaagtgt acgacgagcc cctcggcaga gaccagggac
      961 gggaaaaaag cggcgatcgc gctgtagagg tacgccaccg aggtgcccag cgcgacaagg
     1021 gtgttcatgt cggtggaccc gtgcctgccg acgacccatg cgccacggta gaagcgggcg
     1081 ccgacgtaga actggatcgg cgttgcgagg aggaactgca ggagggcgag ggtggaacgg
     1141 gcaaacggga gactgccgtg cccggcgatc atctcccaat gggagagcag gaggagagga
     1201 acacccagga cgaggccgac gcgtaaccgc gtcaggaggg cccgctcctc ctcccgctga
     1261 acccgctcct gccgggcgag cggatcctcc ccgggagtca cttcgggaac ggaatacccg
     1321 gccccctcta cggcggcccg caggtcggcc acggaggcaa tcccgggcag atactccacg
     1381 ctcgccgtct gcgccgccag gttgacggac gccgtgagca ctcccggaag cttgcggagc
     1441 gcccgctcga cccgccccac gcatgaggcg cacgtcatac ccgcgacggg ggtagtccac
     1501 cgcgcaagat cctcggctct gcgcgcctct tctctcgggg atttgtcctt cataactgaa
     1561 tactatgatg aaaaaggggc tgcggggggt gcggatacga tttcccgaat gcga
//
LOCUS       DATGYW010000323         4635 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_457451, whole genome shotgun sequence.
ACCESSION   DATGYW010000323 DATGYW010000000
VERSION     DATGYW010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4635
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_457451"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1125
                     /gene="hypD"
                     /locus_tag="VK429_04460"
     CDS             <1..1125
                     /gene="hypD"
                     /locus_tag="VK429_04460"
                     /inference="COORDINATES: protein motif:HMM:TIGR00075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HLN91092.1"
                     /translation="GCDLMPQLMNSNIKYIDDFRDPATAKALVERIRRDAGETPVRLM
                     EVCGTHTVEIARCGIRPLLSGAVTMLSGPGCPVCVTPDGYIDAAIALGRERGTLLASF
                     GDMLRVPGKSSSLEKEKGAGLEVRIVYSPLDAVTLAAATPDREVVFLGVGFETTAPAI
                     GGAIRTAAERGVRNFSVLSSVRTIPEAMGVLAADPEVRIEGFLCPAHVSVVIGTDAYR
                     PIARRYGIPCVVAGFEPLDILMGISMLLRQKKEGVARVENEYSRVATPAGNRKAQDLI
                     RDVFAPCDTGWRGIGVIPGSGLRIADRYALFDAEKKFGHPVVYAPSVSACRCGDVLKG
                     KILPVDCPLFGKACVPEEPYGPCMVSSEGSCAAYYKYGAR"
     gene            1133..2140
                     /gene="hypE"
                     /locus_tag="VK429_04465"
     CDS             1133..2140
                     /gene="hypE"
                     /locus_tag="VK429_04465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007290482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HLN91093.1"
                     /translation="MHDKILLSHGEGGKRTRDLIAKVIARYFDNPVLSPFFDSGLLGR
                     IEGEIAFTTDGYVVTPPFFPGGDIGRLAVCGTVNDLAVCGAKAVAISCGLILEEGLPS
                     EILERALAAMRDAAREAGVTIACGDTKVVERGKGDGIFITTAGLGVAVDGWRPAPSEI
                     RPGDRILLTGTMGDHQVAVLIARQNLAISAPVLSDVAPLSGLLLPLLSRFAGKVRFMR
                     DPTRGGVGVTLNEMASAANARFMLDEARLPVRESVRGVCEILGFDPLYLANEGKAVLI
                     VAGDAAEAIVAALREHPYGREAAIIGEVQEGGSGVRMRTLAGGVRAVDYPVGDQLPRI
                     C"
     gene            2140..2499
                     /locus_tag="VK429_04470"
     CDS             2140..2499
                     /locus_tag="VK429_04470"
                     /inference="COORDINATES: protein motif:HMM:NF016056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF393 domain-containing protein"
                     /protein_id="HLN91094.1"
                     /translation="MAVVLVYDAECPVCRAAADWVRRKAEAPGTFELLPCRSAETRSR
                     FPAIAEAACLQAMHLVLPDGTVLAGEKALPEIVRRTRGFRWTAVLFRLPGAGILSRFL
                     YRAFADRRHRIAKRLFT"
     gene            2551..3240
                     /locus_tag="VK429_04475"
     CDS             2551..3240
                     /locus_tag="VK429_04475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008930527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT family protein"
                     /protein_id="HLN91095.1"
                     /translation="MRHEERHRSDRIGWLRAAVMGANDGIVSTASLILGVAAAGGTGS
                     QVAVAGMAGLVAGAMSMAAGEYISVSSQADTEESDLAREREELATNDASERAELAGIY
                     VSRGLDLPLARQVADQLMAHDALGAHARDELGISEIQRARPVQAAIASAATFAVGAGL
                     PLLIVLLVPAGMLTAFVVGTSLACLAILGALAAHAGGARRAVGSLRVTFWGAFAMALT
                     YGVGALFGAVV"
     gene            3346..4080
                     /locus_tag="VK429_04480"
     CDS             3346..4080
                     /locus_tag="VK429_04480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015722019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HLN91096.1"
                     /translation="MIRFEGVHKWFDKLHVLNNINLQVRSGEVVVVCGPSGSGKSTLI
                     RTINDLEPINEGKLVIDGMDLSDKKTDINKLRAEIGFVFQQFNLYPHLSVLKNITLAP
                     IKIRNIPEKEAGNQAMALLERVGLPEKRDAYPSQLSGGQQQRVAIARGLAMKPKIMLF
                     DEPTSALDPEMIGEVLQVMKDLALSGMTMMVVTHEMGFAREVSHRVIFMDHGTVLEEA
                     PPEEFFKNPQHERAKQFLKQILSPMH"
     gene            4105..>4635
                     /locus_tag="VK429_04485"
     CDS             4105..>4635
                     /locus_tag="VK429_04485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015722020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HLN91097.1"
                     /translation="MRKIGTIVLALAMVGALCGAALAGDTLAEVKKKGVLVAGVKDSL
                     PPFGSVDPDTKKFAGYDIDFVNYIAKKLGVKVEYKPVSSANRMPMLMEGRVDLLACTM
                     TKNPERAKQIDFSYTYFLTGQKFLTKKGTVKTLKDLEGKKIGTAKGSTSEQNVANAVP
                     SATILSLDDYPQGILAL"
BASE COUNT          759 a         1528 c         1605 g          743 t
ORIGIN      
        1 ggatgcgact taatgccgca actcatgaac agcaacatta agtacattga cgatttccgc
       61 gacccggcga ccgcaaaggc cctggtcgag cggatccggc gcgatgcggg agagacaccc
      121 gtccgcctga tggaggtttg cggcacccac accgtggaga tcgcgcgctg cgggatccgg
      181 ccgctgctgt cgggcgccgt gacgatgctc tcgggcccgg gatgcccggt ctgcgtcacc
      241 cccgacggtt acatcgacgc cgcgatcgcg ctgggcaggg agcggggcac cctgctcgcc
      301 tccttcggcg acatgctgcg ggtcccgggg aaatcctcct ccctcgagaa ggaaaaaggg
      361 gcggggctgg aggtccgtat cgtgtactcg ccgctcgacg cggtgacgct ggccgccgcc
      421 acgccggacc gggaggtcgt cttcctcggc gtggggttcg agacgacggc gcccgccatc
      481 ggcggtgcca tcaggacggc tgcggaacgc ggcgtgagga acttctccgt cctgtcgtcc
      541 gtccgcacga tcccggaggc gatgggggtc cttgccgccg atcccgaggt ccgcatcgaa
      601 gggttcctct gccccgccca cgtctccgtc gtcatcggga cggacgccta ccggccgatc
      661 gcgcggcggt acggcatccc gtgcgtggtc gccggcttcg agccgctcga catcctgatg
      721 gggatctcga tgctgctgcg gcagaaaaag gagggcgtcg cccgcgtcga gaacgaatat
      781 tcgcgcgtgg ccacccccgc cggcaaccgg aaagcgcagg atctgatccg cgacgtcttc
      841 gccccgtgcg acacggggtg gcgcgggatc ggcgtcatcc ccgggtcggg cctgcggatc
      901 gccgaccggt acgccctctt cgacgccgag aagaagttcg ggcaccccgt ggtctacgca
      961 ccttcggtgt ccgcctgccg ctgcggcgac gtgctcaagg gaaagatcct cccggtcgac
     1021 tgccccctct tcgggaaggc gtgcgtgccg gaggagccgt acgggccatg catggtcagc
     1081 agcgaaggga gctgcgcggc atattacaaa tacggagccc ggtagacccc cgatgcacga
     1141 caagatcctt ctttcccacg gagagggcgg aaagcgcacc cgcgacctga tcgcgaaggt
     1201 gatcgcccgg tacttcgaca atcccgtgct gtccccgttc ttcgactcgg gacttctcgg
     1261 ccggatcgag ggggagatcg ccttcaccac cgacgggtac gtggtgaccc cccccttctt
     1321 tcccggcggc gacatcggtc ggctggccgt ctgcgggacc gtgaacgacc tcgccgtctg
     1381 cggggcgaag gcggtggcga tctcctgcgg cctgatcctc gaagaggggc tgccgtcgga
     1441 gatcctggaa cgcgcgctcg cggcgatgcg ggacgcggcg agggaagccg gggtgaccat
     1501 cgcctgcggg gacacgaagg tggtggagcg cggaaagggg gacgggatct tcatcaccac
     1561 ggcgggcctc ggtgtggcgg tggacggctg gcgcccggcc ccgtcggaga tccgccccgg
     1621 cgaccggatc ctgctcacgg ggacgatggg ggaccaccag gtggcggtgc tgatcgctcg
     1681 acaaaatctc gccatctccg cccccgtgct gtccgacgtg gcgccgcttt cgggcctgct
     1741 ccttcctctg ctttcccggt ttgccggcaa ggtgcgcttc atgcgcgatc ccacgcgcgg
     1801 cggggtgggc gtgacgctga acgagatggc gtccgccgcg aacgcccgct tcatgctgga
     1861 cgaggcgcgg ctcccggtgc gggaatcggt gcgcggcgtg tgcgagatcc tcggcttcga
     1921 cccgctgtat ctcgccaacg aggggaaggc ggtgctgatc gtcgcggggg atgccgcgga
     1981 agcgatcgtc gccgcgctgc gggagcaccc gtacggacgg gaggcggcga tcatcggaga
     2041 ggtgcaggag ggaggaagcg gcgtgcggat gcgcaccctc gcgggcggcg tgcgcgcggt
     2101 cgactacccc gtgggggacc agctcccgcg gatctgctga tggctgtcgt cctcgtctac
     2161 gacgcggagt gcccggtgtg ccgcgcggcc gccgactggg tccggcgcaa ggccgaggcc
     2221 cccggcacct tcgaactcct cccctgccgc tccgcggaaa cccggtcgcg attccccgcc
     2281 atcgccgagg cggcatgcct ccaggcgatg cacctcgtcc tgccggacgg gacggtcctc
     2341 gccggtgaaa aagcgctccc cgagatcgtg cgccgcacgc gggggtttcg atggaccgcc
     2401 gtcctcttcc ggctccccgg cgccgggatc ctgtcgcgtt tcctttatcg cgccttcgcg
     2461 gaccgccgcc accggatcgc gaaacggctc ttcacctgat ccggctaccc ggattatgat
     2521 gttcatcgat gctggaggta aggaaagccc atgcgtcatg aagaacgtca ccgctcggat
     2581 cggatcggat ggcttcgggc cgcggtcatg ggggccaacg acggcatcgt gtcgaccgcc
     2641 agcctgatcc tgggcgtcgc cgcggcgggc ggcaccggga gccaggtggc cgtggcggga
     2701 atggccgggc tcgtcgcggg agcgatgtcc atggcggccg gggaatacat ctccgtcagc
     2761 tcccaggcgg acaccgagga atcggacctg gcgcgcgaac gcgaggagct ggcgaccaac
     2821 gacgcctccg aacgggcgga gctggccgga atctacgttt cccgcgggct cgatctccct
     2881 cttgcgcgac aggtcgccga ccagcttatg gcgcacgacg ccctcggagc ccacgcgcgc
     2941 gacgaactcg gcatctccga gatccagcgg gctcgcccgg tgcaggcggc catcgcgtcc
     3001 gcggccacgt tcgccgtcgg ggcgggcctg ccgctcctga tcgtgcttct cgttcccgcc
     3061 gggatgctga cggcgttcgt cgtggggacg tcgctcgcct gcctcgcgat cctcggggcg
     3121 ctggcggcgc acgccggcgg cgcgaggcgc gccgtcggct ccctgcgggt cacgttttgg
     3181 ggggcgttcg ccatggcgct gacatacggc gtcggcgccc tcttcggcgc cgtcgtctag
     3241 ggttcgaaaa ttctccggga tccgttgacg ccccggtaat gtatacttca cggatgcgaa
     3301 acaggggttg aattccgcag cccgagcaac ttacggggag gcgtgatgat ccggttcgag
     3361 ggtgtccaca aatggttcga caagctccac gtgctgaaca acatcaacct ccaggtgcgg
     3421 tcgggcgagg tcgtcgtggt ctgcggcccc tccggctcgg ggaagtcgac cctcatccgg
     3481 acgatcaacg acctcgagcc gatcaacgag gggaaactcg tcatcgacgg gatggacctc
     3541 tcggacaaga agaccgacat caacaagctg cgggcggaga tcggcttcgt cttccagcaa
     3601 ttcaacctct acccccacct gtcggtcctg aaaaacatca ccctcgctcc gatcaagatc
     3661 aggaatatcc ccgagaagga agccggcaac caggcgatgg cgcttctgga gcgcgtcggg
     3721 ttgcccgaga agcgggacgc ctacccgtcc cagctttccg gaggccagca gcagcgggtg
     3781 gcgatcgccc gggggctggc gatgaaaccg aagatcatgc tcttcgacga gcccacctcg
     3841 gcgctcgacc ccgagatgat cggcgaggtg ctccaggtca tgaaggacct ggccctctcg
     3901 ggcatgacga tgatggtggt cacccatgag atggggtttg cccgggaggt ctcccaccgc
     3961 gtcatcttca tggaccacgg gacggtcctg gaggaggccc cgccggagga gttcttcaag
     4021 aatccgcaac atgaacgggc gaagcagttc ctgaagcaga tcctgtcgcc catgcattaa
     4081 cacaccccaa ggagggaacg aacgatgagg aagatcggaa cgatcgttct ggcgctggcg
     4141 atggtcggcg cgctgtgcgg cgcggcgctg gcgggcgaca cgctggcgga ggtgaagaag
     4201 aagggcgtgc tggtggcggg cgtgaaggac tcgctgccgc cgttcgggtc cgtggacccg
     4261 gacacgaaga agttcgccgg gtacgacatc gacttcgtca actatatcgc caagaagctg
     4321 ggcgtaaagg tggagtacaa gcccgtctcc tccgcgaacc ggatgccgat gctgatggag
     4381 ggccgcgtcg acctcctcgc ctgtacgatg acgaagaacc cggagcgggc caagcagatc
     4441 gacttcagct acacctactt cctgaccggc cagaagttcc tgacgaagaa ggggacggtc
     4501 aagaccctta aggacctcga ggggaagaag atcggaacgg ccaagggctc cacctcggag
     4561 cagaacgtgg cgaacgcggt tccctcggcc accatcctgt ccctcgacga ctacccgcag
     4621 gggatcctcg ccctg
//
LOCUS       DATGYW010000324         2513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_242834, whole genome shotgun sequence.
ACCESSION   DATGYW010000324 DATGYW010000000
VERSION     DATGYW010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2513
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242834"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..647
                     /locus_tag="VK429_04490"
     CDS             <1..647
                     /locus_tag="VK429_04490"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLN91098.1"
                     /translation="YLLEQCAKEKVKKFVFVSSGGAVYGTPAALPVPEDSPEKPESSY
                     GIIKLAIEKYLGLFHRLYGLNYVVLRPSNPYGERQNPDGDQGVIAVFLGRIAKGRAID
                     IWGDGSNVKDYVYIEDLIDGMYRAAFSDTVHRVFNMGSGIGHSVSDIVRRISEKVDRP
                     ISVNYLPQGAFDVSRIYLDITRARKELGWEPRISLDEGLHRTWEFVKNPGSLHE"
     gene            768..1562
                     /locus_tag="VK429_04495"
     CDS             768..1562
                     /locus_tag="VK429_04495"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLN91099.1"
                     /translation="MDPHRDVKDVMKSFYDRNVRYHELIGGMEEGGYVYDDLITALLS
                     RAAVPGRRPRVIDVAAGTGYNLRVAMGTGAASFGIDLSIHACRIARGKDRDLAVCRGD
                     AETLPFRDAAFDLALCLQLIEHTPFPEKVIAEITRVLRPGGYLFLSAPNMLGSSLFSR
                     VLRVFPARFSGEIKRIRPLPVDILSRWDAASNAVEVADLDACNRVTVFHALNLLRANG
                     LDVVHLDTLRHPKKYRPGRYALARALQWVPVLRYTGVNFKIIARKR"
     gene            1562..>2513
                     /gene="asnB"
                     /locus_tag="VK429_04500"
     CDS             1562..>2513
                     /gene="asnB"
                     /locus_tag="VK429_04500"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HLN91100.1"
                     /translation="MCGIVGFSAADPRGAAPCDLDSALGTLGRRGPDGKGRYADAGTL
                     LGHTRLSIIDLSTGDQPMTNEDGSLWIVFNGEIYNYRELQGDLRARGHVLRTTSDTEV
                     ILHLYEDRGEECLQDLRGMFAFAIWDRTRGRLFLARDRLGVKPLVYHEGEGGFSFASE
                     IQALFAMRGDLSREPDLTAIDAFLTLQYIPSPMTGFRSVRKLPPAHYMFVRDGKIERV
                     RRYWDIPYGAPCDLSFPDACERLREILLDATRIRLRSDVPLGAFLSGGVDSSIVVAAM
                     SRLLDSPVKTFTVGFGVKGYDETGRAREVARRFGTDHTEFQ"
BASE COUNT          444 a          764 c          838 g          467 t
ORIGIN      
        1 tctatctgtt ggaacagtgc gccaaagaga aggtgaagaa gttcgtattc gtatccagcg
       61 gaggtgccgt ctacggaacg ccggcggcgc tgcccgtccc ggaggacagc ccggagaagc
      121 ccgaatcttc ctacggaatc ataaaacttg cgatcgagaa atatctgggg ctgtttcacc
      181 ggctttacgg tttgaattat gtggtcctgc ggccctccaa cccctatggc gaaaggcaga
      241 acccggacgg tgaccagggc gtcatcgcgg tattcctggg aaggatcgcg aaaggccggg
      301 ccatcgacat ctggggggac ggcagcaatg tgaaagatta tgtttacata gaggacctga
      361 tcgacggaat gtacagggcg gcgttcagtg ataccgttca tcgtgtcttc aatatgggta
      421 gcggcatcgg gcattcggtg agcgatatcg tacggaggat ctccgagaag gttgaccgtc
      481 ccatttcggt aaactatctt ccccaagggg ctttcgacgt ttccaggatt taccttgata
      541 taacccgcgc ccggaaagaa ctcggatggg agcccaggat ttctctcgat gaggggctgc
      601 atcggacgtg ggagttcgtg aagaatccgg gttctcttca cgagtgacat gtgccatccc
      661 gggtaccggg ggcctgcggg aatttccggg gtgtcgacca acggaacaaa ccgatcaaca
      721 gccgcgggac gaaacagagg ccgggcgggg aagggactga gaggatcatg gatcctcatc
      781 gcgatgtaaa ggacgtgatg aagtcgttct acgaccggaa cgtccgctat cacgagttga
      841 tcggcgggat ggaggaggga gggtacgtct acgacgacct gatcaccgct ctgctttcgc
      901 gggcggcggt tccggggcgc cgcccccggg tcatcgatgt ggcggcaggt accggatata
      961 acctgcgggt tgcaatggga acaggcgcgg catctttcgg aatcgacctg tcgatccacg
     1021 cctgccgcat cgcccggggg aaggatcggg atctcgcggt gtgccggggg gatgcggaga
     1081 cgctcccgtt ccgggacgcc gcgttcgacc tggccctctg tctccagctg atcgagcaca
     1141 cgccgttccc cgagaaggtg atcgccgaga tcacccgcgt tctccgtccg ggcgggtatc
     1201 tgttcctctc cgccccgaac atgctcggat cgtccctctt ttcgagggtc ctgcgggtct
     1261 tcccggcccg cttttccggg gagattaagc ggatccggcc gctgcccgtc gatatcctgt
     1321 cgcggtggga cgcggcgtcg aacgccgtgg aggtcgccga cctcgacgcc tgcaaccggg
     1381 tcaccgtctt ccatgcgctc aacctcctcc gggcgaacgg gctcgatgtc gtccacctcg
     1441 acaccctgcg ccacccgaag aagtaccgtc cggggcggta cgcccttgcg agggcgcttc
     1501 agtgggttcc cgtgctccgg tacaccgggg tgaacttcaa gatcatcgcc cggaaacgct
     1561 gatgtgcggg atcgtgggct tttccgcggc ggacccgcgg ggagcagccc cgtgcgacct
     1621 cgattccgcg ctcgggaccc tcggccggag gggaccggac ggaaagggga gatacgcaga
     1681 cgccgggacc ctcctcgggc acacccgtct ctccatcatc gatctctcca ccggagacca
     1741 gccgatgacg aacgaggacg ggtccctgtg gatcgtcttc aacggggaga tctacaatta
     1801 tcgcgagctc cagggagacc ttcgggcccg cgggcacgtc ctgcggacga ccagcgacac
     1861 ggaggtcatc ctgcacctgt acgaggaccg cggggaggag tgtctccagg acctccgggg
     1921 gatgttcgcc ttcgcgatct gggaccggac ccgggggagg ctcttcctcg cacgggaccg
     1981 tctgggggtc aagccgctcg tgtaccacga gggggaaggc gggttctcct tcgcctcgga
     2041 gatccaggcc cttttcgcca tgcgcgggga tctgtcccgg gagccggacc tgacggcgat
     2101 cgacgcgttc ctgacccttc agtacatccc gtccccgatg accggcttcc gctccgtgcg
     2161 gaagctcccc ccggcgcact acatgttcgt ccgggacgga aagatcgagc gcgtccggcg
     2221 gtactgggac atcccgtacg gggcgccctg cgacctctct tttccggatg cgtgcgaacg
     2281 gctgcgggaa atccttctcg atgcgacgcg gatccggctg cgcagcgacg tccccctcgg
     2341 ggcgttcctg agcggtggag tggactcgag catcgtcgtt gcggcgatga gccgcctcct
     2401 ggactccccg gtgaagacgt tcacggtcgg gttcggggtc aaggggtacg acgagacggg
     2461 ccgtgcccgg gaggtggcgc gccggttcgg taccgaccac acggagttcc aag
//
LOCUS       DATGYW010000325         1691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_297108, whole genome shotgun sequence.
ACCESSION   DATGYW010000325 DATGYW010000000
VERSION     DATGYW010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297108"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VK429_04505"
     CDS             <1..356
                     /locus_tag="VK429_04505"
                     /inference="COORDINATES: protein motif:HMM:NF014908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91101.1"
                     /translation="IDWSRPAVEIYNLVRAVTRPYPGAFTELAGERLTLWWAIPLPAE
                     AGNALSPGTIRVSGGPSYEMAGGCVAPVSGPRRVVVETGDGWLQLEEIEWRTRTAKGE
                     AIVDLLAGAANGRIS"
     gene            353..1381
                     /locus_tag="VK429_04510"
     CDS             353..1381
                     /locus_tag="VK429_04510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-4-keto-pentose/UDP-xylose
                     synthase"
                     /protein_id="HLN91102.1"
                     /translation="MKVLILGVNGFIGHHLTARILKETDWKIYGMDLSADRLGRSANH
                     PRFDFVEGDISINKEWIEYHIKKADVVLPLVAIATPKVYVERPLSVFELDFEENLRIV
                     RQVHRYGKRIVFPSTSEVYGMCADKEFDEESSPLVLGPIVKERWIYSCCKQMLDRVIW
                     AYGRQGLAFTLFRPFNWIGPRLDSIETAKEGSSRVVTQFIADLYLGKPIQVVDGGEQR
                     RCFTYVDDGIAGLMKILANRNGCANGGIFNIGNPANDHSVRELAEMLRELYAKHPRNR
                     GKKVPPIIEVNSQQFYGEGYQDIQTRTPSIRRAKEILGWEPKVPMRTALKKTLDAFLA
                     EADASRPR"
     gene            1443..>1691
                     /locus_tag="VK429_04515"
     CDS             1443..>1691
                     /locus_tag="VK429_04515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012531407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-deoxy-4-formamido-L-arabinose-
                     phosphoundecaprenol deformylase"
                     /protein_id="HLN91103.1"
                     /translation="MSSARRTLALKIDVDTRRGMEHGVPSLLDTLGAFHVPATFFLSF
                     GPDNSGKAVCQLLRNPRFLVKMLRTNAPGLYGLRTALYG"
BASE COUNT          299 a          536 c          584 g          272 t
ORIGIN      
        1 ggatcgactg gtcccggccg gcggtggaga tctacaacct cgtccgcgcg gtcacccgtc
       61 cctacccggg ggcgttcacg gagctcgcgg gggagaggct cacgctgtgg tgggcgatcc
      121 ccctgccggc ggaggcggga aacgcgctgt ctccggggac gatccgggtt tccggcgggc
      181 cgtcgtacga gatggcgggc gggtgcgtcg ccccggtttc cggacctcgg cgggttgtcg
      241 tcgagacggg ggatgggtgg cttcaactgg aggaaatcga atggagaacg cggacggcga
      301 agggggaggc gatcgtcgac ctgctcgccg gcgccgcgaa cgggaggata tcatgaaggt
      361 gctgatcctt ggagtgaacg gtttcatcgg ccatcacctg acggccagga tcctcaagga
      421 gaccgactgg aagatctacg ggatggatct atccgccgac cggctgggga ggtcggcgaa
      481 ccatccccgg ttcgacttcg tcgagggcga catctcgatc aacaaggagt ggatcgagta
      541 ccacatcaag aaggcagacg tggtcctgcc gctggtggcc atcgccacgc cgaaggtcta
      601 cgtcgagcgg ccgctgtcgg tcttcgagct cgacttcgag gagaacctgc gaatcgtccg
      661 gcaggtgcac cgatatggca agcggatcgt cttcccctcg acgtccgaag tgtacgggat
      721 gtgcgccgac aaggagttcg acgaggagag ctcgccgctc gtcctcggtc cgatcgtcaa
      781 ggagcggtgg atctactcgt gctgcaagca gatgctggac cgcgtgatct gggcatacgg
      841 gcggcagggg ctcgccttca ccctcttccg ccccttcaac tggatcgggc cgcgcctcga
      901 ctcgatcgag accgccaagg aggggagctc ccgcgtggtc acgcagttca tcgccgacct
      961 gtacctggga aagccgatcc aggtggtgga cggcggggag cagcgccgct gcttcaccta
     1021 cgtggacgac gggatcgcgg ggctgatgaa gatcctggcg aaccggaacg gctgcgcgaa
     1081 cggcgggatc ttcaacatcg ggaacccggc gaacgaccac tcggtccggg aactcgccga
     1141 aatgctccgg gagctgtacg cgaagcaccc ccggaaccgc gggaagaagg ttccccccat
     1201 catcgaagtc aactcgcagc agttctacgg cgaggggtac caggacatcc agacgcggac
     1261 cccctccatc cggcgcgcga aggagatcct cgggtgggag ccgaaggtgc cgatgaggac
     1321 ggcgctgaag aaaaccctcg atgccttcct cgccgaggcg gacgcctccc gcccccggta
     1381 gtacttacgt gtccgcgcca gaggggggca ttcctggttc aaacgcgaga gggagggtag
     1441 gagtgtcctc cgccaggcgc acccttgcgc tcaagatcga cgtcgacacg cggcgcggga
     1501 tggagcacgg tgtcccgtcc ctgctcgaca cgctcggcgc gttccacgtt cccgcgacct
     1561 tcttcctctc gttcggcccg gacaactcgg ggaaggccgt gtgccagctc ctgcggaatc
     1621 cgcgcttcct cgtcaagatg ctccgcacga acgcccccgg cctgtacggc ctccggaccg
     1681 cgctgtacgg c
//
LOCUS       DATGYW010000326         2416 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_342097, whole genome shotgun sequence.
ACCESSION   DATGYW010000326 DATGYW010000000
VERSION     DATGYW010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342097"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..951)
                     /locus_tag="VK429_04520"
     CDS             complement(55..951)
                     /locus_tag="VK429_04520"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLN91104.1"
                     /translation="MDLTTRLRSFQAPAPVFAAALLLSLALGGCAPLFFHPARELAAP
                     PDLAGGSLEEIFFPSGDGVKLHGWILRPPGPPKGTVLFFHGNAENINTHVNAVLWLVK
                     AGYLVFAFDYRGYGISDGTPDIPGVNRDGVAALDLAFHIRGGEEDGIVVFGQSLGGAI
                     ATYAVANSPRRGEVKALIVDSAFAGYRRIVRDKLIAGIVTLPLAWPASWTVEDGYSPE
                     RWIGSVAPVPVVVTHGTKDAVVPFSHGERLYRLAGQPKGFWKVEGGGHATALLLPEVR
                     NQLLGFLDSVLPPSVNKSPPPH"
     gene            1057..1884
                     /gene="ccsB"
                     /locus_tag="VK429_04525"
     CDS             1057..1884
                     /gene="ccsB"
                     /locus_tag="VK429_04525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HLN91105.1"
                     /translation="MHTILLKVTALFYLVGALAYLHFVFTLNERSAKLGRMLLLIGAI
                     LHGVGFVARYFVAGYTPITSLFESLSFSAFAIVCVFLAFELRYHLRVLGAFVAPLAFA
                     FSVSAAFLPGEVRALAPALNSYWLPVHVILLFFGNAVFAVAFGAAIMYLLMEKELKHK
                     KMGAIFKRLPSLNVLDDINYRCLTIGFPLLTLGIITGSIWAEYAWGSYWSWDPKEVWS
                     LITWLLYAALLHGRMTVGWRGRKAAILAIVGFCAILFTFLGVNLLLPGLHTYTNLSG"
     gene            2071..2268
                     /locus_tag="VK429_04530"
                     /pseudo
     CDS             2071..2268
                     /locus_tag="VK429_04530"
                     /inference="COORDINATES: protein motif:HMM:NF017051.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
BASE COUNT          388 a          790 c          787 g          451 t
ORIGIN      
        1 tggccaaatg gaattgaaac attgtttcaa gattacccgt actctggtcc gcggtcaatg
       61 gggtggcggt gatttgttca cggagggcgg aaggacggaa tcgaggaatc cgagcaattg
      121 gttccgcacc tccggcagga gcagggcggt cgcgtgcccg cctccctcca ccttccagaa
      181 gcccttcggt tgtccggcga gccggtagag ccgctcgccg tgcgagaagg ggacgaccgc
      241 gtccttcgtc ccgtgggtca ccacgacggg gacgggggcg acggatccga tccatcgctc
      301 cgggctgtac ccgtcctcga ccgtccagct cgcgggccac gccagcggca gggtgacgat
      361 cccggcgatg agcttgtccc ggacgatcct cctgtaccct gcgaaggcgc tgtcgacgat
      421 cagcgccttg acctcccctc tgcgcggcga attggcgacg gcgtatgttg cgatcgcgcc
      481 cccgagggac tgcccgaaca cgacgatccc gtcttcttcc cctccacgga tgtgaaacgc
      541 cagatcgaga gcggcgacgc cgtcccgatt caccccgggg atatccggtg taccatcgga
      601 tatcccgtat ccgcgatagt cgaaggcgaa caccaggtat cccgccttga cgagccacag
      661 gaccgcgttg acgtgggtgt ttatgttttc cgcgttcccg tggaagaaga gaacggtccc
      721 ctttggcggg ccaggggggc gaaggatcca accgtggagt ttgaccccgt ccccggaggg
      781 gaagaagatc tcttccagcg atccccccgc gaggtccggc ggagcggcga gctcccgggc
      841 gggatggaag aacagggggg cgcaccctcc cagggccagg gagagcagca gggcggcggc
      901 gaagacaggg gcaggcgcct ggaaactgcg gagccgggtt gtgaggtcca tgccgacgga
      961 ttatctcatg gccggggagg tggaatcctc cccgattccg cgcgcctgcg gaatccacgc
     1021 ttgttccggg cgccgcgggt ggtttaaaat gtcccgatgc ataccatcct gctcaaggtc
     1081 acggccctct tctatctcgt cggggcgctg gcgtacctcc acttcgtctt cacgctgaac
     1141 gaacgaagcg cgaagctcgg gcggatgctg ctgctgatcg gcgccatcct ccacggggtc
     1201 gggttcgtcg cgcgctactt cgtcgccggg tacaccccga tcacgagcct cttcgagtcg
     1261 ctctccttct ccgccttcgc gatcgtgtgc gtctttctcg ccttcgaact ccggtaccac
     1321 ctccgggtgc tcggcgcgtt cgtggcgccg ctggccttcg ccttcagcgt ctccgccgcc
     1381 ttcctcccgg gggaagtccg ggcgctggcc cccgcgctca actcgtactg gctccccgtc
     1441 cacgtgatcc tccttttctt cggcaacgcc gtcttcgccg tggcgttcgg ggcggcgatc
     1501 atgtacctgc tgatggagaa ggagctgaag cacaagaaga tgggcgcgat cttcaagcgg
     1561 ctgccgtcgc tgaacgtcct cgacgacatc aactaccggt gcctgacgat cggtttcccg
     1621 ctgctcaccc tcgggatcat caccggatcg atctgggcgg agtacgcctg gggctcctac
     1681 tggagctggg acccgaaaga ggtctggtcc ctcatcacgt ggctgctcta cgccgcgctg
     1741 ctccacgggc ggatgaccgt cggctggcgc gggcgcaagg cggcgatcct cgccatcgtc
     1801 gggttctgcg cgatcctgtt caccttcctc ggcgtgaacc ttctcctgcc gggtctgcac
     1861 acctacacga acctttccgg ctgatgggac ggcagagtgc ctcaattcat aaatacggtg
     1921 aagcaccgag agggtcgatg cgccgcatcc ggcaaggcgt cgcgaccgag gcgtactggg
     1981 caagtacggt gagggagcgc aacgaagctg gggcggatgc agcggcactc gaatgccgcc
     2041 gtatttatga attgaggcat tgagcggcgc atgagcgaga tcgtcatcgt cggattgaac
     2101 caccggaccg cgccggtgga ggtccgggag cgcctggcgt tccccgcgga cacgctgggg
     2161 cacgccctcc gggggcttcg ggagcgggac ggcatctcgg aaggtgtgat cctctccacc
     2221 tgcaaccgcg tcgaggtctg cgtcctctgt gatgcgggat acaagggcgt ggagcacgtg
     2281 aaggatttcc tctccgggtt ccacggcgtc ccgatcggcg agctgtatcg ccttgcggtc
     2341 gacgatcacg ccggccttcc ccagcgcctc cgcgatgtcc cgcgaagtga tggcgccgaa
     2401 cagctttccc tcctcc
//
LOCUS       DATGYW010000327         2847 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_342131, whole genome shotgun sequence.
ACCESSION   DATGYW010000327 DATGYW010000000
VERSION     DATGYW010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2847)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2847)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2847
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342131"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /gene="surE"
                     /locus_tag="VK429_04535"
     CDS             complement(<1..523)
                     /gene="surE"
                     /locus_tag="VK429_04535"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HLN91106.1"
                     /translation="MSNSERVILVSNDDGVRSEGIEALAEALKDLGTVYVVAPDRERS
                     AASHSLSLSHPLRVEKISPRVYSVDGTPTDCVNLGVNGILRGKKIDLLVSGINKGANL
                     GDDITYSGTVSAAMEGTLLGIPSVAISLVTRSRFRFDAAAAMAVDVAQKVLKRGLPDD
                     TLLNVNVPNSPRDE"
     gene            complement(590..666)
                     /locus_tag="VK429_04540"
     tRNA            complement(590..666)
                     /locus_tag="VK429_04540"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(630..632),aa:Pro,seq:ggg)
     gene            complement(707..1084)
                     /locus_tag="VK429_04545"
     CDS             complement(707..1084)
                     /locus_tag="VK429_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012531772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannose isomerase type II C-terminal
                     cupin domain"
                     /protein_id="HLN91107.1"
                     /translation="MERGDRPWGYYLVLHEESGHKVKQFVVRPGSRLSLQRHRRRAEH
                     WQVVRGEAVVTRGKEIVRLLPGGSIDIPLGALHRVESVGVENLVVIEVQMGEYLGEDD
                     IERFEDDYGRDVKKSAATAPKMK"
     gene            complement(1155..1508)
                     /locus_tag="VK429_04550"
     CDS             complement(1155..1508)
                     /locus_tag="VK429_04550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011681810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HLN91108.1"
                     /translation="MTATQIPDKFHFKIGEVSRILGVKPYVLRFWETEFRITPAKNRS
                     QHRVYNRQEVETLLEIKQLLYEERFTIEGARVKLKERAKDRQKQLKLDLAENPYRATL
                     RQVKKDLARIKAILK"
     gene            complement(1525..1818)
                     /locus_tag="VK429_04555"
     CDS             complement(1525..1818)
                     /locus_tag="VK429_04555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012241218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HLN91109.1"
                     /translation="MTKADLVEIVYEKIGGLSKKESQDIVEKIFETMKASLKQGDKIK
                     ISGFGNFTLRDKRPRKGRNPQTGDDIEITARRVLTFRPSQILKSHINEPAKPS"
     gene            complement(1837..>2847)
                     /locus_tag="VK429_04560"
     CDS             complement(1837..>2847)
                     /locus_tag="VK429_04560"
                     /inference="COORDINATES: protein motif:HMM:NF036799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91110.1"
                     /translation="ARLSGYDSIPSTYPESKAPEFSGDDRFVDVQERAFDFLRGRGFS
                     QAVNFSFVAGRTWERLGSFLGFDPTDAVRLVNPISDETTLMRPHLLAGLLSNASDNVR
                     RFIDDVRLFEAGKAFGKSYVEGHFEEARLGVILCGKRLPGDWSGADAPADFFDMKGVV
                     EPLLLHLCASPVHVVPTRLRPFFEEGKAADILRDGEVVGWFGAIRNELLASFQLAGPV
                     FYGEIRLLKATASPPPPGRYAPLPKFPPVFRDVACVFPIGVPVGDVLAMVREVSPEVE
                     EAGVFDIFTGEKIGDGNKSVGIRVKLQSLDRTLTEAEVHSIHSKIVKLLENRFGGKIR
                     TS"
BASE COUNT          505 a          902 c          858 g          582 t
ORIGIN      
        1 tctcatcgcg cggggagttg gggacgttga cgttcagcag ggtgtcgtcg ggcagccccc
       61 gcttcagcac cttctgggcc acgtccacag ccatcgctgc ggcagcgtcg aaccggaaac
      121 ggctgcgggt gacgagcgag atggcgaccg aggggatgcc gagcagcgtc ccctccatcg
      181 ccgcggagac ggttccggag taggtgatat cgtcccccag gtttgcgccc ttgttgattc
      241 cggagacgag gaggtcgatc ttcttccccc gcaggatgcc gttcacgccg aggttgacgc
      301 agtcggtcgg cgtgccatcg acggagtaga cccggggaga gatcttctcc acccgcaggg
      361 ggtgggagag cgacaaggag tggctggcgg cgctccgttc ccggtcgggt gcgacaacgt
      421 acacggtgcc gagatccttc aaggcctcgg caagcgcctc gattccctcg gaacgcactc
      481 cgtcgtcgtt cgaaacgaga attacgcgct cgctattact caagagagcc cccttttccc
      541 aaaggaaaga ggggctacga gagcgtgtct cgtaacccct cgtgtttgct ggtcgggacg
      601 actggatttg aaccagcgac cccttgcacc ccatgcaagt gcgctaccag gctgcgctac
      661 gtcccgatcc gtgagctttt catcttaccg gacgagggga atgttgtcac ttcattttcg
      721 gagcggtcgc cgcagacttc ttcacgtccc gcccgtagtc gtcctcgaac cgctcgatgt
      781 cgtcctcccc caggtactcc cccatctgca cttcgatgac gacgaggttt tccaccccga
      841 cgctctcgac acgatggagg gcgcccagcg ggatgtcgat cgatcctcca gggaggagcc
      901 gaacgatctc cttgccgcgc gtcaccaccg cttccccgcg gacgacttgc caatgttccg
      961 cccgtcgccg atgccgctgg aggctcaggc ggctcccagg ccgaacgacg aactgcttca
     1021 ctttgtgccc ggactcctcg tgcaggacca ggtaatatcc ccagggacga tcgccccgct
     1081 ccattgtcaa tcggctctcc gttacgaaag gacgtggcac gcaatatctt tattatgcgc
     1141 ctgcttaaga gtgtctattt aagtattgcc ttgattcttg cgaggtcttt tttcacctgc
     1201 cgcagcgtcg ccctgtacgg gttttcggcg aggtcgagct tcagctgctt ctggcggtcc
     1261 ttcgcccgtt ccttcagttt tacccgggcg ccctcgatgg taaagcgctc ttcgtagagg
     1321 agttgcttga tctcgaggag ggtttccacc tcctggcggt tgtacacccg gtgttgggat
     1381 cgattcttcg cgggggtgat ccggaattcg gtttcccaga accgcagaac gtaaggcttc
     1441 acacccaaga tgcgactaac ctcgccgatc ttgaaatgaa acttgtccgg tatctgggtg
     1501 gcggtcacgc cttccctggg cgcctcagga cggcttggct ggttcgttga tgtgggactt
     1561 caggatctgg ctgggacgga acgtcagcac gcggcgcgcg gtgatctcga tgtcgtcgcc
     1621 ggtttgcgga ttgcgtccct tccgagggcg cttgtcgcgc agggtgaagt taccgaagcc
     1681 ggaaatcttg atcttgtcac cctgcttgag actggccttc atcgtttcga agatcttctc
     1741 cacgatgtcc tgcgattctt ttttggaaag acccccgatt ttctcgtaaa cgatctcgac
     1801 caggtccgct ttcgtcatgt cgcctcctac ggtccctcaa gaggtccgaa tcttaccgcc
     1861 gaaccgattc tccaataatt ttacgatctt gctatgtata ctatggactt ccgcttccgt
     1921 caaggttctg tcaagggatt gcaattttac ccggatcccc acgctcttgt tcccgtcccc
     1981 gatcttttcc ccggtgaaga tgtcgaaaac gccggcctcc tcgacctcgg gggagacctc
     2041 gcgaaccatc gcgagaacgt cgcccacggg caccccgatc gggaagacgc acgccacgtc
     2101 cctgaaaaca ggaggaaact tcggcagcgg tgcgtatcgc cccggtggcg gcggcgaagc
     2161 ggtggccttc agcaggcgga tctcgccgta gaagacgggg ccggcgagct ggaacgaagc
     2221 gagcagctcg ttgcggatcg ccccgaacca gccgacgacc tcgccgtccc gcaggatgtc
     2281 cgccgccttc ccttcctcga aaaatggccg gaggcgcgta gggacgacgt ggaccgggga
     2341 tgcgcaaagg tgcagcagca ggggctccac gacccctttc atgtcgaaga agtccgcggg
     2401 agcgtccgcg ccggaccagt cgcccggaag ccgcttcccg cagaggatca cgccgagccg
     2461 ggcctcctcg aagtgcccct cgacgtacga cttcccgaac gccttccccg cctcgaagag
     2521 ccggacgtcg tcgatgaaac ggcgcacgtt gtccgatgcg ttcgacagga gaccggccag
     2581 caggtggggg cgcatcaagg tcgtttcgtc cgagatcggg ttcacgagcc ggaccgcgtc
     2641 cgtggggtcg aatccgagga aggaccccag ccgctcccag gtccggcccg cgacgaagga
     2701 gaagttcacg gcctgcgaaa atccgcgtcc gcgcaggaag tcgaaagccc tttcctggac
     2761 gtcgacgaac cggtcgtccc cggaaaattc cggggctttc gattccggat acgtcgaggg
     2821 gatggagtcg tacccggaca gccgggc
//
LOCUS       DATGYW010000328         2110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_403697, whole genome shotgun sequence.
ACCESSION   DATGYW010000328 DATGYW010000000
VERSION     DATGYW010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403697"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..569
                     /locus_tag="VK429_04565"
     CDS             <1..569
                     /locus_tag="VK429_04565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017915465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HLN91111.1"
                     /translation="YSPLRHWKVGKESTVGVVGLGGLGHMAVKLANAFGANVVMFTTS
                     PGKTADAKRLGAHEVVISKNSNEMRKQANRFDFILNTVAAPHDLDAFLNLLRRDGTMC
                     MVGAPALPHPSPNVFNLIFGRRQLSGSLIGGIRETQEMLDFCGEHNIVSDIEQIPIRK
                     INEAYERMLRSDVKYRFVIDMASLPKEK"
     gene            1468..>2110
                     /locus_tag="VK429_04570"
     CDS             1468..>2110
                     /locus_tag="VK429_04570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017301700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HLN91112.1"
                     /translation="MARIVRFHQTGGPEVLRIEEVAPSPPGEGEVRIAVKAIGLNRAE
                     SLFRQGMYLETPNLPSRLGYEAAGTVEAAGAGVTRFKVGDRVNTLPAFSMGKYGVYGD
                     SVVVPSDAVSSLPGNLSFEEGASIWVAYLTAYGALIEHGGLRKGQHVLITAASSSVGY
                     STIQVVRAAGGISIATTRNPEKAGMLRQGGADHVIVTEKEDLSARVMEITEGRG"
BASE COUNT          426 a          632 c          653 g          399 t
ORIGIN      
        1 cgtactcccc gctgcgccac tggaaggtcg gtaaggagag cacggttggc gtggtcggcc
       61 tcgggggact ggggcacatg gcggtaaagc tggccaacgc tttcggcgcg aacgtggtga
      121 tgttcacgac ctctccgggc aagaccgccg acgcgaagcg gctgggtgcc catgaggtag
      181 tcatctcgaa gaactccaac gagatgagga agcaggcgaa ccggttcgac ttcatcctga
      241 acacggtggc cgcgccgcac gatctcgacg cattcctcaa cctgctccgg cgcgacggca
      301 cgatgtgcat ggtcggcgcc ccggcgctgc cgcacccgtc gcccaacgtc ttcaacctga
      361 tcttcgggcg tcggcagctt tccggttcgc tgatcggtgg gatccgggag acccaggaga
      421 tgctcgattt ctgcggggag cacaacatcg tgtccgatat cgagcagatc ccgatccgga
      481 agatcaacga ggcctatgag cggatgctca ggagcgacgt gaaataccgc ttcgtcatcg
      541 acatggcgtc cttgccgaag gagaaatgaa gaaggcgatt cgatggtgcg gcaaaggggg
      601 ggccttctat cccctgttcc aggggttcag ccgcagccgc ccaccaggaa gccgcccatc
      661 gtgtgccacc cacacccacg cgataccgta agagatcgag aatgggccga ggaggacaag
      721 aagccacttt ccgtttcgca cgccaaggat cataatcgcg aggccggcgc aaatgaatat
      781 cgctgcgatc atggtggcga gaattcgctt gggaaggggg agattcggga gctggctctc
      841 cagcggccga gccttcgccc ggaagctacg ggcaggaccg gcccctcccg gacggaacag
      901 tcgatccggc agcttcatgc ggccagacgg tttcggattg atgacgatga aacggacgtc
      961 ttcttttttt ttcctcgaac tgtctccgcg tttcggggtc atagagtgct aaaaaccatc
     1021 tcataagatt ccccgcgagt caaactcttg ccccaagcat gtcattgcgc ctgccattcg
     1081 gtcctttccc ggggacatcg gtttccatcg ctaccccctc tccctcgaaa tagtacgctt
     1141 atcgcgtaca gcgaggcagc ttgccttttg gcattgttta ttgtatacag tacacatatc
     1201 tgtttcctgg cagatgaatc cagtcaagag gtgacgtatg aaatccaaga tgacgccgat
     1261 ggtttggata ttgctgctga ctgtaatcat tgggtttggc caggtgctat ccctggcggc
     1321 caagtcgatc cggtagccgg tcaggatatt tccaaaccgc ccgatattga agcctgtaat
     1381 ccggtatcgg cccgaaactt tgccccgccg gcgggattcg aacgggtagg tcgaacaggt
     1441 aactcgaatc gcgggaagga gcgagcgatg gcgaggatcg tccgatttca ccagaccggc
     1501 gggcccgagg tactccggat cgaggaggtg gcgccttcac cgcccgggga gggcgaggtc
     1561 cgaatcgccg tcaaggccat cgggctgaac cgcgcggaat cccttttccg ccaaggaatg
     1621 tatctcgaaa ccccgaacct tccctcccgc ctcggatacg aggcggcggg taccgtcgag
     1681 gccgccgggg cgggagtcac ccgcttcaag gtcggggacc gcgtcaacac gcttcccgcc
     1741 ttttccatgg ggaagtacgg cgtttacgga gattccgtcg tcgtcccgtc cgacgccgtt
     1801 tcgtcgctcc cgggaaatct ctcgttcgag gaaggcgcct ccatctgggt agcatacctg
     1861 accgcctacg gcgccctcat cgagcacggg ggactccgga agggacaaca cgtgctgatc
     1921 accgcggcca gcagcagcgt cggctactcc accatccagg ttgtccgcgc cgcagggggc
     1981 atctccatcg ccaccacacg gaatccggaa aaagcgggga tgctgcggca gggcggggct
     2041 gatcacgtca tcgtcaccga aaaggaggac ctctcggcac gagtgatgga gattacggaa
     2101 gggcgcgggg
//
LOCUS       DATGYW010000329         1751 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_342219, whole genome shotgun sequence.
ACCESSION   DATGYW010000329 DATGYW010000000
VERSION     DATGYW010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342219"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..989)
                     /locus_tag="VK429_04575"
     CDS             complement(<1..989)
                     /locus_tag="VK429_04575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91113.1"
                     /translation="MKTQPTSVHPCWLLFQALAAAFLLSLATGVSHGAGPPAGSAPGG
                     TDTTIGAAPSATDNATGAAPSAIDNNWVDQAHSGIERGLFATVVWFDRFFGDERVVLA
                     ERPESILRWKSEFLWDEEEHFSFRSSVRASLRLPRLKDRWHLVFTSESRGDPNVIIPE
                     DPGNPGLDPRSQVRTSSTALIYDIFRTPHSVLDAGAGVKVTIPPNAFVRTRYQHARPV
                     GFSTLGRFTATAYWDARDGFGESNQLDFERWLALPTLLQWSNSFTIEEKNKDNGWAWG
                     TQLSLLQKLSPTSAITFAAGVSGTTLPAWIAQDYRVFVRHRRNVWRKWLFLEA"
     gene            complement(1030..1485)
                     /locus_tag="VK429_04580"
     CDS             complement(1030..1485)
                     /locus_tag="VK429_04580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91114.1"
                     /translation="MNRFGKWAALCISIGALTAGGDALAAGNAASGGSEGAKAPVSEP
                     VKVEKAKGADAFSVSETYEKAAKLDKKTVVVRGKVVKVSKGIMGKNWVHLQDGSGDPG
                     KGTNNLVVTTQDVPKVGDVVTAKGTLHKDKDFGAGYKYRVIVEEATVKQ"
     gene            1606..>1751
                     /locus_tag="VK429_04585"
     CDS             1606..>1751
                     /locus_tag="VK429_04585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011033527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HLN91115.1"
                     /translation="MRVVGVNGSARKGGNTTLLLRHVFAELEREGIETELVELSGKRI
                     HGCTA"
BASE COUNT          291 a          559 c          573 g          328 t
ORIGIN      
        1 tccgcctcga ggaagagcca tttccgccag acgttccggc ggtgccggac aaagacccgg
       61 taatcctgcg cgatccatgc gggcagggtc gtgcccgaga cgccggcggc gaaggtgatc
      121 gcgcttgtcg gggaaagctt ctggaggagg gagagttgcg tcccccacgc ccacccgttg
      181 tccttgttct tctcctcgat cgtaaaggaa ttggaccact ggagcagggt gggaagggcg
      241 agccaccgtt caaagtcgag ctggttcgat tcgccgaaac cgtcccgtgc gtcccaatac
      301 gcggtcgccg tgaaccggcc gagggtgctg aaaccgacgg gccgcgcgtg ctggtaccgc
      361 gtccggacga aggcgttggg ggggatcgtc accttcacgc cggcccccgc gtcgaggacg
      421 gagtgcgggg tccgaaagat gtcgtagatc agtgccgtgg agctggtccg gacctggctt
      481 ctcgggtcca ggccggggtt ccctggatcc tccgggatga tgacgttcgg atcgcctcga
      541 gactcgctcg tgaagaccag atgccatcgg tctttcagcc gcggaaggcg cagggaggcg
      601 cgaaccgagc tgcggaagga gaagtgctcc tcctcgtccc acaggaactc gctcttccac
      661 cgaaggatcg actccggccg ctcggcgagc accacccgtt cgtcgccgaa gaaccggtcg
      721 aaccagacga cggtggcaaa caggccccgc tcgatcccgg agtgggcttg gtccacccag
      781 ttgttgtcaa tagcggaggg ggccgcaccg gtggcgttgt cggttgcgga gggggccgca
      841 ccaatagtgg tgtcggtacc tccgggagcg gacccggccg gtgggccggc cccgtgcgat
      901 acgccggtgg cgagggaaag gaggaacgcc gccgccaatg cctggaaaag cagccagcag
      961 gggtgcacgc tcgttggctg cgttttcatc ttcgtccggc ggcccctgtg ccggtggagg
     1021 cggtggtagt tactgcttaa cggtcgcctc ctcgacgatc acacggtatt tgtatcccgc
     1081 gccgaaatcc ttgtccttgt ggagggttcc cttcgccgtc accacgtcac cgaccttcgg
     1141 aacgtcctgc gtcgtgacga ccaggttgtt cgtccccttc cccggatccc cgcttccgtc
     1201 ctgcaggtgg acccagttct ttcccatgat ccccttggac actttgacga cctttccccg
     1261 cacgacgacc gtcttcttgt ccagttttgc ggctttctcg taggtttcgg acacgctgaa
     1321 ggcgtccgct cccttcgcct tttccacctt gaccggctcg gagaccggcg cctttgcccc
     1381 ttcgctcccg ccgctcgccg cgttcccggc cgccaatgcg tcgccccccg ccgtcaaagc
     1441 cccgatggaa atgcagagag cggcccattt tccgaaacga ttcatccgga tcccctttcc
     1501 aggaagtttt cgcatagtgt accatcctcg ccgcattgtc cgttaaacta cgcacggggc
     1561 ggcacgatcc cgggggccga cgaagatccg gaagggggag tcccgatgcg cgtggtgggg
     1621 gtcaacggaa gcgccaggaa gggcgggaac acgacattgc tccttcggca tgtgttcgcg
     1681 gagctcgaga gggaggggat cgaaacggag ctggtggaac tttccggaaa gaggatccac
     1741 gggtgcaccg c
//
LOCUS       DATGYW010000330         1658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_22238, whole genome shotgun sequence.
ACCESSION   DATGYW010000330 DATGYW010000000
VERSION     DATGYW010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22238"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(126..905)
                     /locus_tag="VK429_04590"
     CDS             complement(126..905)
                     /locus_tag="VK429_04590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012098905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF169 domain-containing protein"
                     /protein_id="HLN91116.1"
                     /translation="MDAATLNQHLEKHLRVHTFPLGIKSLKPGEPLPDKAKIPSKHLG
                     VKVAICQAISIARRYGWTMAFSGADLSCPIAKAAFGFEERNDYYTSGGLADGMYASCR
                     EAGAAFEDALAKYDPGEYAHVVAGPLSRANFVPDTVLVYGNSAQVLRLLNAVLYKRGG
                     SLKSDFSGRGDCTDIVIKGKKTGEPQVILPCYGDRIFGMTGDDEMAFTFPFDRAEEVV
                     EGLEKTHAGGVRYPVPIYLRFQADFPKSYQELEKIWAESKK"
     gene            complement(917..>1658)
                     /locus_tag="VK429_04595"
     CDS             complement(917..>1658)
                     /locus_tag="VK429_04595"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLN91117.1"
                     /translation="TGYVGTPSFLMTILEKAKEMGYTSGEGLSLQVGLVTGEMFPESL
                     RARFRDEFGVQVRQCYGTADVGSLGYECHEAKGMHVPDEIFLEMVDPATGDPVPPGAI
                     GEVVVTLPNRTYPLVRFATGDLSILSDDPCPCGRTSPRLLKLVGRVDQVTKVKGMFVH
                     PEQVTQLAGKVPVIASAQFVVTRTEHDDHMEMRIVLKDSAAASEALAARIVEMAREIT
                     RLRGEVRFIAATEVEEPEKKIIDKRKWD"
BASE COUNT          259 a          531 c          562 g          306 t
ORIGIN      
        1 ggtgaagtag aaaagatcgg cgttctgaac gaggaacgcg gcgtccagat gtgccccgcg
       61 caagcccgtc tgcagcttcg caatccgcgc gtggatctcc ggggccggcg tcagcgtgta
      121 cacgcttact tcttcgactc cgcccagatc ttttcaagct cctggtagga tttggggaag
      181 tcggcctgga agcgcaggta gatggggacg gggtaccgga cgccgccggc gtgggtcttc
      241 tccagcccct cgacgacctc ttcggcgcgg tcgaagggga aggtgaacgc catctcgtca
      301 tcgccggtca tgccgaagat ccggtcgccg tagcacggca ggatcacctg cggctcgccg
      361 gtcttcttcc ccttgatgac gatgtcggtg cagtcgccgc ggcccgagaa atcgcttttg
      421 agggatccgc cccgcttgta gaggaccgcg ttcaggagcc gcagcacctg ggcggagttg
      481 ccgtagacga gcaccgtgtc ggggacgaag ttggcgcggc tcaaggggcc ggcgaccacg
      541 tgggcgtact cgccgggatc gtacttggcg agggcgtctt cgaacgccgc ccccgcctcc
      601 ctgcacgagg cgtacatccc gtcggcgagc cccccggagg tgtaatagtc gttccgttcc
      661 tcgaagccga acgccgcctt ggcgatgggg cacgagaggt ccgccccgga aaacgccatc
      721 gtccagccgt atcggcgggc gatcgagatg gcctggcaga tcgccacctt cacgcccagg
      781 tgcttcgagg gtatttttgc cttgtcgggg agcggctccc cgggtttcag cgacttgatc
      841 cccaggggga aggtgtgcac ccgaaggtgt ttttcgaggt gctggttcag cgtggcggcg
      901 tccatgttcc ctcccttcag tcccatttcc gtttgtcgat gatcttcttc tccggctctt
      961 ccacctcggt ggcggcgatg aatcggacct cgccccgcag gcgggtgatc tcgcgggcca
     1021 tctccacgat gcgggccgcg agcgcttcgg acgcggcggc ggaatccttg aggacaatcc
     1081 gcatctccat gtggtcgtcg tgctcggtcc gggtgacgac gaactgcgcg gaggcgatca
     1141 cggggacctt ccccgccagc tgggtgacct gctcggggtg gacgaacatc cccttgacct
     1201 tcgtgacctg gtcgacgcgg ccgaccagct tcagcagccg gggggaggtg cgcccgcagg
     1261 ggcacgggtc gtcggagagg atggagaggt ccccggtggc gaatcgcacg agcggatacg
     1321 tccggttggg cagcgtcacc accacttcgc cgatggctcc gggcgggacg ggatcacccg
     1381 tggcgggatc gaccatctct aggaagatct catcggggac gtgcatccct ttcgcttcgt
     1441 ggcattcgta gcccagcgac ccgacgtcgg ccgtgccgta gcattggcgg acctgcacgc
     1501 cgaactcgtc gcggaaccgg gcccgcagcg actcggggaa catctcgccg gtcacgagac
     1561 cgacctggag cgagaggccc tcgccggagg tgtaccccat ctccttcgcc ttttcgagga
     1621 tcgtcatgag gaacgacggc gtcccgacat atccggtg
//
LOCUS       DATGYW010000331         3821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_496662, whole genome shotgun sequence.
ACCESSION   DATGYW010000331 DATGYW010000000
VERSION     DATGYW010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3821
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_496662"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(33..1178)
                     /locus_tag="VK429_04600"
     CDS             complement(33..1178)
                     /locus_tag="VK429_04600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002616683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLN91118.1"
                     /translation="MEFALNDEQQALRDMLRTFVAKEVRPKAGEWDSSAEFPRETVAK
                     LGELGLLGAMVPEEYGGSGMDMLSYAVAVEEIAKGDGSLGLTVASHNSLCTAHILGYG
                     SEAVKRKYLPELASGKALGAWALTEPGSGSDSLAMRTKAEWKKDRWVINGSKMFITQG
                     NVAGVYVVLAVTDREKGKDGVTAFVFPAGTKGLSVGKKLHKLGMRSSDTAELVLEDLE
                     VGPDAVVGQVNSGFRDTMKNLAGGRISIAALSVGIGLGAMREALAYSKERTQFGHAVS
                     EFQAIQWMFADMGTELEAAELMTFRAAFLKDAGRPYTREAAMAKLFASEAAMRATIKA
                     VQVFGGYGYTQEYPAERYMRDAKLCEIGEGTSEVQRIIIARDLIRGH"
     gene            complement(1183..1731)
                     /locus_tag="VK429_04605"
     CDS             complement(1183..1731)
                     /locus_tag="VK429_04605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015743239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon domain-containing OB-fold protein"
                     /protein_id="HLN91119.1"
                     /translation="MAKKNPVKRPAASSKFEELMTGTTVFNVPLPADLNALKGMSPIV
                     IKQPYSIEYLHTYGQDSPFFAGLSNRKLLGTKCPKCDYTWATPRLACTQCGGETDWVE
                     LPQTGRVHTFTTCYFGGEEFLKETPFHLVLVEFDGVDTLFLSRLLGPEQPEEIRIGMK
                     VKAKFRRNSQLKPTDVYFVPAE"
     gene            complement(1734..3020)
                     /locus_tag="VK429_04610"
     CDS             complement(1734..3020)
                     /locus_tag="VK429_04610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015743238.1"
                     /note="Catalyzes the synthesis of acetoacetyl coenzyme A
                     from two molecules of acetyl coenzyme A. It can also act
                     as a thiolase, catalyzing the reverse reaction and
                     generating two-carbon units from the four-carbon product
                     of fatty acid oxidation; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase domain-containing protein"
                     /protein_id="HLN91120.1"
                     /translation="MRPVYMVSGGVSKFAKARPDATFQKMVKESFDYAMNDVPKLKHS
                     MIDGSVVSYFSDHFTRQLMAGIMATDYLGLCPKPNKRIEGGGATGGLCFQAGWEAVAS
                     GRMNVCAAFGFETMSHVPTWKGNEFIALASDVNFDYPVGGFYSGYYAMMVNRHMHEFG
                     TTVGQLAMVSVKNHMNAYGNPYAQKRRKLTIADVRNSAMVAYPLTLLDICVMSDGAAT
                     CILADEETAFKLTDHPVKITGVGTGTDMMRMSDRPHGDVLLAPNEKKSDYRNLKYPGV
                     HSFRAGRSAGLQAYKMAGVTDPLKQIDFVELHDAYTSSEIQTYEDLALCKYGDGGKFV
                     EAGYPFMPQIDYGMKLPKKGAIPVNPSGGLIACGHPVGATGLMQAVFAFWQIQGSIRR
                     HYGSSELQLKRANRGLIHSHAGTGTYVTVSIMERGW"
     gene            complement(3076..3489)
                     /locus_tag="VK429_04615"
     CDS             complement(3076..3489)
                     /locus_tag="VK429_04615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012648213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HLN91121.1"
                     /translation="MPTDTARKIRIVVAKPGLDGHDRGAKIIARALRDAGMEVIYTGL
                     HQTPEQIAETAIQEDADAVGLSILSGAHNYLFPRIIQLLREKKMGDVVLFGGGIIPDE
                     DIPKLVKKGVDRVFTPGTPIQEIVDYVNGRIHPRK"
     gene            3618..3815
                     /locus_tag="VK429_04620"
     CDS             3618..3815
                     /locus_tag="VK429_04620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91122.1"
                     /translation="MYDVLFLDRAHGEKLLATGLDHDDACRVARIESQRRGVGRMFLA
                     GSEVGNRGEMVVIVDSAARAA"
BASE COUNT          623 a         1264 c         1169 g          765 t
ORIGIN      
        1 gaggatctcc cttccggcgg tgttcacggc ggtcagtggc cccggatcag gtcgcgggcg
       61 atgatgatcc gctggacttc cgatgtgcct tccccgatct cgcacagttt cgcgtcccgc
      121 atgtaccgct ccgcgggata ctcctgcgtg tacccgtacc cgccgaacac ctgtaccgcc
      181 ttgatcgttg cgcgcatcgc cgcctcggat gcgaacagtt tggccatcgc cgcttcgcgg
      241 gtgtacgggc gaccggcgtc cttgaggaac gccgcccgga aggtcatcaa ctcggcggcc
      301 tcgagctcgg tccccatgtc cgcgaacatc cactggatcg cctggaactc cgacaccgcg
      361 tgcccgaact gggtccgctc cttcgaatag gcgagcgcct cgcgcatggc cccgaggccg
      421 atccccacgg agagggcggc gatcgagatc cgccccccgg cgaggttctt catcgtgtcc
      481 cggaatccgg agttgacctg ccccacgacg gcgtcgggcc caacctcgag atcttccagg
      541 accagctcgg cggtgtccga ggaacgcatc ccgagcttgt gaagtttttt cccgaccgag
      601 agccccttcg tacctgccgg gaagacgaag gcggtgacgc cgtccttccc cttctcccga
      661 tccgtgacgg caaggaccac gtataccccg gcgacattcc cctgggtgat gaacatcttg
      721 ctcccgttga tcacccagcg gtccttcttc cattccgcct tcgtccgcat cgcgagggag
      781 tcggaaccgg aaccgggctc ggtgagggcc caggccccga gcgcctttcc ggacgccagc
      841 tcgggaaggt atttccgttt caccgcctcc gatccgtagc cgaggatgtg ggcggtgcaa
      901 agggagttat gggacgcgac cgtcaacccg agcgatccgt cgcccttggc gatctcctcc
      961 acggcgacgg cgtagctcaa catgtccatg ccggatccgc cgtactcctc ggggaccatc
     1021 gccccgagga gaccgagctc gccgagtttt gcgaccgttt cccgggggaa ctccgccgag
     1081 gagtcccact cccccgcctt cgggcggacc tccttcgcga cgaacgtccg cagcatgtcc
     1141 cgcagcgcct gctgttcgtc gttcagggcg aactccatcc cgctactccg cgggcacaaa
     1201 atagacatcg gtcggtttca gctgggaatt gcggcggaac ttcgccttca ccttcatacc
     1261 gatccggatc tcctccggct gctccggccc gagcagccgg gaaaggaaga gcgtgtcgac
     1321 tccgtcgaac tccaccagca cgaggtggaa cggggtctcc ttcaggaact cctcgccgcc
     1381 gaaatagcag gtggtgaagg tgtgaaccct ccccgtctgc gggagttcga cccagtcggt
     1441 ctccccgccg cactgcgtgc acgcaagccg gggggtggcc caggtgtagt cgcacttcgg
     1501 gcatttcgtc ccgagaagct tcctgttcga aagtcccgcg aagaaggggg aatcctgtcc
     1561 gtaggtgtgc aggtattcga tgctgtacgg ctgcttgatc acgatggggg acatcccctt
     1621 gagcgcattg aggtccgcgg gcagcgggac gttgaacacc gtcgtcccgg tcatcaattc
     1681 ctcgaatttg gaagaggccg cgggccgctt caccggattc ttcttcgcca tggtcaccac
     1741 ccccgttcca tgatcgacac ggtgacgtag gtccccgtgc ccgcgtggct gtggatcagc
     1801 ccgcgattgg ccctcttgag ctgtagttcc gagctgccgt aatgcctcct gatgctcccc
     1861 tggatctgcc agaaggcgaa gacggcctgc atgagcccgg tggccccgac cggatggccg
     1921 caggcgatca gcccgccgga ggggttcacg gggatagccc ccttcttcgg gagcttcatc
     1981 ccgtaatcga tctgcggcat gaagggatac cccgcctcga cgaacttccc gccgtcgcca
     2041 tacttgcaaa gcgcgaggtc ctcgtacgtc tggatctccg aggaggtgta cgcgtcgtga
     2101 agctccacga agtcgatctg tttcagcgga tcggtcacgc ccgccatctt gtacgcctgc
     2161 agcccagcgc ttcgtcccgc ccggaaggag tggaccccgg gatatttcag gttcctgtag
     2221 tcgctcttct tctcgttcgg cgcgaggagt acgtcgccgt gcggccgatc cgacatgcgc
     2281 atcatgtcgg tgcccgtccc cacgccggtg atcttcaccg ggtggtccgt aagcttgaac
     2341 gccgtctcct cgtcggcgag gatgcaggtg gccgcgccgt cggacatcac gcagatgtcg
     2401 agaagggtca gcgggtaggc gaccatggcg gagttccgca cgtccgcgat ggtcagcttg
     2461 cgtctcttct gtgcgtatgg gttcccgtag gcgttcatat ggttcttcac cgacaccatc
     2521 gcgagctgcc cgaccgtggt gccgaactcg tgcatgtgcc ggttcaccat catcgcgtaa
     2581 tacccggagt agaatccccc caccggatag tcgaagttca cgtcggacgc aagggcgatg
     2641 aattcgttcc ccttccacgt cgggacgtgg gacatcgtct cgaacccgaa tgccgcgcag
     2701 acgttcatcc gtcccgaggc gaccgcttcc caacccgcct gaaagcagag gccgccggtg
     2761 gcgccgccgc cctcgatccg cttgttcggc ttcgggcaga ggccgaggta gtcggtcgcc
     2821 atgattccgg ccatcagctg ccgggtgaaa tggtcggaga agtacgagac aacggagccg
     2881 tcgatcatgg aatgtttgag cttcggcacg tcgttcatcg cgtagtcgaa cgactccttc
     2941 accatcttct ggaacgtcgc gtccgggcgg gccttcgcga atttgctcac gccgccggaa
     3001 accatgtaga ccggtctcac gttcgatccc ccttgtcgga tggaatgcct tcctcttcgc
     3061 gccggttcct ccgcctcatt tccgcgggtg gatccgcccg tttacgtagt cgacgatctc
     3121 ctggatcggt gtccccggcg tgaaaacccg gtcgaccccc ttcttcacga gtttcgggat
     3181 gtcttcgtcg gggatgatcc ctccgccgaa gagcaccacg tcgcccatct tcttctcccg
     3241 gagcaactgg atgatcctcg ggaacaggta gttgtgcgcg ccggagagga tcgagagccc
     3301 gacggcgtcg gcgtcctcct ggatcgcggt ctcggcgatc tgctccggcg tctggtgcag
     3361 accggtgtag atcacctcca ttcccgcgtc acgcagggcg cgggcgatga tcttcgctcc
     3421 gcgatcgtga ccgtccaatc cgggcttggc gacgacgatc ctgatttttc tggcggtgtc
     3481 ggtcggcact attcagtgat ggcctcggtc gattgcgcgt taaccgtagt tgaacaggaa
     3541 gtttctacgg ttcccgacgc ggtattccga tacgagaatg agaagtgaat aggggattcc
     3601 aatcaggagg cacagcggtg tacgacgttc tctttcttga ccgcgctcac ggggagaagc
     3661 tcctggccac cggtctcgat cacgacgatg cctgccgggt cgcccggatc gagtcacagc
     3721 gtcgcggggt cggcaggatg ttcctggcgg gctccgaggt cggaaaccgc ggcgagatgg
     3781 tggtcatcgt cgactcggcc gcgcgagccg cttagctaac c
//
LOCUS       DATGYW010000332         5149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_297830, whole genome shotgun sequence.
ACCESSION   DATGYW010000332 DATGYW010000000
VERSION     DATGYW010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 5149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5149
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_297830"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            137..850
                     /locus_tag="VK429_04625"
     CDS             137..850
                     /locus_tag="VK429_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011940150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91123.1"
                     /translation="METTVSPGRLIEVLGGMYSRELGIDLSGPDRPQIFRWFLAAKLM
                     GARISTRVALSTWRQFDRRGVDTPERIQQTGWDGLVAILDEGGYARYDFSTATKLLAI
                     TGDILKRYRGDLNVLHDCSEGPRDLEARLMGLGKGIGPVTANIFLREMRPVWPKADPA
                     ISPLALPAARDLGLIKGKENPLDALRKTWAAEKARGYMFGDFEAALVRLGKDYCRKLR
                     VTSCPMRDICPKLRPARSL"
     gene            937..2667
                     /gene="polX"
                     /locus_tag="VK429_04630"
     CDS             937..2667
                     /gene="polX"
                     /locus_tag="VK429_04630"
                     /inference="COORDINATES: protein motif:HMM:NF006375.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase/3'-5' exonuclease PolX"
                     /protein_id="HLN91124.1"
                     /translation="MINPQVANVFHEIADLLELSGDNPFRIRAYRRAAMNVEAIPKDV
                     AAMSEEELQSLPGIGKDLAHKIRQFVDTGRIDAHEELQKVIPRGLLEILRVPGIGPKT
                     ARLLFDKKNVKSLEELESLARSGNLTGLPGIQAKTEENIRKGIGQLRKGMERFPLGKA
                     LPIASGILELLQEAVPGARFALAGSIRRWKETVKDIDILAAGKKAEAITKAFVGLPGT
                     REVLERGATKSSLLTVDGIQVDLRVVAEDSFGAALQYFTGSKEHNVRLREMASRRGLK
                     INEYGVFREADSKRLGGREEEDVYKALGLPFVPPELREDAGEIEAAIEGKLPDLVSLA
                     DIRGDLHVHTKWSDGAHDLDALVGAARARKYGYVAITDHSKGLGVAHGLTEDRVREQM
                     GVIDAANRKLKGFRILKGIEVDIRGDGTLDLPDTLLSELDIVVASIHSGFKQPGEQLT
                     KRLVSAIRNPFVSIIAHPTGRLLGEREAYPVDMETVISAAAKHGKAMEINAYPLRLDL
                     SDTWARVAMQRRVPLAVSTDTHLLSNLDFMGYGVSIARRGWLGPGDVLNTRPFPELAR
                     RLLAMRRKRV"
     gene            2988..4379
                     /locus_tag="VK429_04635"
     CDS             2988..4379
                     /locus_tag="VK429_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015837230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HLN91125.1"
                     /translation="MIKTYVLDTNVLLHDPGAIFKFEDNHVVIPIVVVEELDNFKKSQ
                     DMLGQNARRVSNAIDALKTRGSLQDGVPLEHAGTLRVAFNGNANLIPLMLQGEKADTH
                     ILGCAIANQESESKLAAKEKRDSMPVVLVSKDTNLRIKAEALGIRAQDYENDRIPDVS
                     NLYGEARIIEMPVEVFSALAGNGETETAAVKEFGLEVNECFVARCGTSSILARHSAFS
                     GAIVNLSKNSDKDVHGILPKNKEQRFALELLMDPTVSLVTLAGMAGTGKTLLALAAGL
                     NQVMEDGRYSRLMACRPVFPMGKDLGYLPGDIAEKINPWMQPIFDNIACLYGAFKPGK
                     RGKAKSERTEGERMKYPTRPHEELMAYGILEVEALTYIRGRSIPNQFIVVDEAQNLTP
                     HEVKTILTRAGEGSKVVLTGDPYQIDNPFVDAASNGLSHVVNRFRGQPEAGHVTLIRG
                     ERSRLAEKAAKLL"
     gene            complement(4426..4584)
                     /locus_tag="VK429_04640"
     CDS             complement(4426..4584)
                     /locus_tag="VK429_04640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020202165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HLN91126.1"
                     /translation="MGRYDLVLVIEAPNDETMCRVALGLGMLGNAKTETLKAFSAQEM
                     DKILVGLP"
     gene            4682..5059
                     /locus_tag="VK429_04645"
     CDS             4682..5059
                     /locus_tag="VK429_04645"
                     /inference="COORDINATES: protein motif:HMM:NF013677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HLN91127.1"
                     /translation="MSPIEVITSVQRRRRWTPEEKRALLEEAEHPDSSVSAVARKYGI
                     NPNQMFHWRKLMREGALVAVGADDHVVPASEVKQLKAQIRELERLLGKKTMETEILRD
                     AIRIAREKKLLLRMPLLKKDGSL"
BASE COUNT         1114 a         1534 c         1598 g          903 t
ORIGIN      
        1 gacgacaatc caacattcac cgctgccgca accttgtgaa ctttccgggt ggaagataca
       61 taatgtcctc aattctaaat ttttatatct agttaatatt gtcaaccagt tctttctttg
      121 gagggtgtct ggccccatgg aaaccaccgt gtcgccagga cggttgatcg aggtcctcgg
      181 aggcatgtat tcccgcgagc tcgggatcga cctctcggga ccggatcgcc ctcagatctt
      241 ccgctggttc ctggctgcca agctgatggg cgcgaggatc tcgacgaggg tagcgctttc
      301 aacatggagg cagttcgacc gtcgcggtgt cgacaccccg gagagaatcc aacaaaccgg
      361 ctgggacggc ctcgtggcga ttctggacga aggggggtac gcccggtacg acttttccac
      421 cgccaccaag ctgctcgcca tcacgggcga catcctaaaa cgatatcgcg gggacctgaa
      481 cgtcctccac gactgctcgg aaggaccgag ggacctggaa gcccggctca tgggtcttgg
      541 gaaggggatc gggccggtga cggcgaacat cttcctgcgc gagatgcgcc ccgtgtggcc
      601 caaggccgat cccgccatct cccccctcgc cctgccggcg gcgcgtgacc ttggccttat
      661 caaagggaaa gagaatccgc tggatgcgtt gaggaaaaca tgggcggcgg agaaggcgcg
      721 cggatatatg ttcggcgact tcgaggcggc ccttgtgcgc cttggcaagg attactgccg
      781 gaagctccgc gtgaccagct gcccgatgcg ggatatctgc cccaaacttc ggcccgcccg
      841 gagcctgtag atcttcccgg gaatccaccc gttgcctcgt gcccggtccg gcggaataat
      901 ggaaccgtaa gcatcacggg ttgacggggt gtcgggatga taaatcccca ggtggccaac
      961 gtgttccacg aaatcgccga cctcctcgaa ctgtccgggg acaacccgtt ccgaatccgt
     1021 gcctatcggc gcgcagcgat gaacgtcgaa gcgatcccga aagacgtggc cgcaatgagc
     1081 gaggaggagc ttcagtccct cccagggatc ggcaaggacc tcgcccacaa gatccggcag
     1141 ttcgtggaca cgggccggat cgacgcccac gaggaactgc agaaggtgat cccccgcggt
     1201 ctgctcgaga ttctgcgggt gccggggatc ggtccgaaga ccgcgcgcct cctcttcgat
     1261 aaaaagaatg tgaaaagcct cgaggagctt gagtcgctgg cccgctccgg gaatctcacc
     1321 ggcctgccgg gaatccaggc gaagaccgag gagaacatcc gtaaggggat cgggcagctc
     1381 cggaagggga tggagcggtt ccctttaggc aaggcgcttc cgatcgccag cgggatcctg
     1441 gaacttctgc aagaggccgt tcccggcgcc cggttcgccc tcgccgggag catccggcgc
     1501 tggaaggaaa cggtgaagga catagacatc ctcgccgcgg ggaaaaaggc ggaagcgatc
     1561 acgaaggcgt tcgtcggcct accggggacg cgggaggtgc tcgagcgcgg ggcgacaaaa
     1621 tcctccctcc tgaccgtgga cgggatccag gtggacctgc gggtggtcgc ggaggactcc
     1681 ttcggggcgg cgctccaata cttcaccgga agcaaggagc acaacgttcg cctccgggag
     1741 atggcgtcac ggcgagggct gaagatcaac gagtacggag tgttccgcga ggcggattcc
     1801 aagcgactcg ggggacggga ggaggaggac gtatacaagg ccctcgggct ccccttcgta
     1861 ccccccgaac tgcgggagga cgccggggag atcgaggccg ccatcgaggg gaagctcccg
     1921 gacctggtct cccttgcgga tatccggggg gacctccacg tccacacgaa gtggtccgac
     1981 ggggcgcacg acctcgatgc cctggtcggg gcggcgagag cgcggaagta tggatacgtc
     2041 gcgatcaccg atcactccaa ggggctcggc gtggcgcatg ggctcaccga ggatcgggtc
     2101 cgggagcaga tgggggtgat cgacgcggcg aaccggaagc tcaaggggtt ccggatcctc
     2161 aaggggatcg aggtggacat ccggggcgac gggacgctgg acctcccgga tacgctgctt
     2221 tccgagctgg acatcgtggt ggcctccatc cactcggggt tcaagcagcc cggcgagcaa
     2281 cttacgaagc gcctcgtctc cgcgatccgg aacccgttcg taagcatcat cgctcacccc
     2341 accgggagac tcctcgggga gcgcgaggca taccccgtgg acatggagac ggtgatctcg
     2401 gcagcggcca agcatggcaa agcaatggaa atcaacgcct atccgctgcg actggacctc
     2461 tccgacacct gggcccgggt ggcgatgcag cgccgcgtcc cgctcgcggt cagcacggac
     2521 acgcacctcc tgagcaacct cgacttcatg gggtacggcg tctccatcgc ccgccgtggg
     2581 tggctcggac ccggggacgt gctgaacacc cggcccttcc cggaactcgc cagacgcctt
     2641 ctggcgatgc gccggaaacg ggtctgatgc cggtgagcga gggggtttcc ccctcccggg
     2701 aagcggtcgc ccctgccggt tttttggccg ctttgcggca gagtgaagca agttatcggt
     2761 tgcaattgtg gcaagatcca gattaggatc gacgtagacc ttgtacgcat caacaaaatc
     2821 ccttcctttg aatccaatct ctatggaaga tggcgagcgc gaaacgacat gggcattcgt
     2881 catgatccat ccgcgctgtt cgactccttg cccgcaagct caaactctgg gtacaggttc
     2941 gccgcaaacg aggcaagggt ctggaaagac accctaatgg aggtcgcatg atcaagacgt
     3001 atgtactcga caccaacgtg ttgctccatg accccggagc gattttcaag ttcgaagaca
     3061 accacgtcgt tattccaatc gtcgtggtgg aagaactcga taacttcaag aaaagccagg
     3121 atatgctggg acagaacgcc cggcgggtct ccaatgccat cgacgcgcta aaaaccaggg
     3181 ggagcctgca ggatggcgtc ccgctggaac acgccgggac ccttcgcgtg gcattcaatg
     3241 gcaacgccaa tctgatccca ctgatgctcc aaggggaaaa agcggatacg cacattttgg
     3301 ggtgtgcgat tgccaatcag gagagcgaat ccaagctcgc ggccaaggaa aaacgcgatt
     3361 cgatgcctgt ggttctggta tccaaggata caaacctccg aatcaaggcg gaggcactgg
     3421 gcatccgggc gcaggactac gaaaacgatc ggatcccgga cgtctccaat ctttacggcg
     3481 aagctcggat catcgaaatg ccagtggaag tgttcagtgc actcgcgggc aacggggaga
     3541 ccgaaacagc ggcggtaaaa gaattcggac ttgaggtcaa tgaatgcttt gtggccagat
     3601 gcggaaccag ctccatcctc gcgcgccact ccgccttttc cggggcgatc gtgaacctgt
     3661 ccaagaacag cgacaaagat gtccacggga tcctgccgaa aaacaaagag cagcggttcg
     3721 ccctcgaact gctgatggat ccgaccgtct ccctggtgac cctcgccgga atggccggta
     3781 cggggaaaac cttgctggcg ctggcggcgg ggctgaatca ggtcatggaa gatggccgct
     3841 actcccgctt gatggcctgc cggcccgtgt tccctatggg aaaagacctc ggatatctcc
     3901 cgggagatat tgcggagaag atcaacccct ggatgcaacc gatcttcgac aacatcgcgt
     3961 gtctctacgg agctttcaaa ccagggaagc gcggaaaagc aaaaagcgag cgtaccgaag
     4021 gggaaaggat gaagtatccc accaggccgc acgaggagct catggcgtac ggaatccttg
     4081 aagtcgaggc gctgacctat atccgcggac gttccatccc caaccagttc attgtcgtgg
     4141 atgaagcgca aaacctgacg ccacacgagg tcaagacaat cctgacccgg gcgggagagg
     4201 gctcaaaggt cgtccttacc ggagacccgt accagatcga caatcccttt gtcgacgcgg
     4261 catccaatgg gctttcccac gtcgtcaatc gattccgtgg ccagccggag gcgggacatg
     4321 tcaccctgat ccgcggggaa agatcacgct tggcggaaaa agctgccaaa ctcctgtaga
     4381 acggaaagac ccgtaactca cgcgatgtcc tcctcgtttt ttcctctacg gaagccccac
     4441 gaggatcttg tccatctcct gagccgaaaa agccttgagc gtctccgtct tggcgtttcc
     4501 caacatcccc aagcccaacg ccacgcggca catggtttcg tcattgggag cttcgatcac
     4561 cagcacgagg tcgtagcgcc ccatgtgaag ttgcccccgt tttgaccgga cactcctttt
     4621 gctgataata agtgatagga gtacgactgg tcgtatgact acccctaagg acaggcccga
     4681 catgagcccc atcgaggtaa tcacctcggt ccagcgtcgc cgacgctgga ctccggaaga
     4741 aaaacgggca cttctggaag aagccgagca tccggactcc tctgtttctg ccgtggcccg
     4801 gaagtacggc atcaacccca accagatgtt ccattggcgc aagctcatgc gcgagggggc
     4861 cctggtcgcc gtgggagccg acgatcatgt ggtccctgcc tcggaggtga agcagctcaa
     4921 ggcccagatc cgggagttgg agcgccttct gggcaagaag acgatggaaa cggagatcct
     4981 gcgggacgcg atccgcattg cccgcgaaaa aaaacttctg ttgcggatgc ccttgctcaa
     5041 gaaggacggt tccctgtgaa gacgatcacg gataccttgg gcgtctcccg gtcgaacgtg
     5101 tacgcgaaga gggaaaatgc cccgcgccgg cggtaccgga agaccgagg
//
LOCUS       DATGYW010000333         1616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_458391, whole genome shotgun sequence.
ACCESSION   DATGYW010000333 DATGYW010000000
VERSION     DATGYW010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1616
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458391"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VK429_04650"
     CDS             complement(<1..226)
                     /locus_tag="VK429_04650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91128.1"
                     /translation="MECGVAMFAGNWWAGLLTWVAFAVVVTAAVTFVAARRHPGVGSP
                     PALPFDEIRLLSDRVEELARRLDSMERPPRA"
     gene            complement(255..695)
                     /locus_tag="VK429_04655"
     CDS             complement(255..695)
                     /locus_tag="VK429_04655"
                     /inference="COORDINATES: protein motif:HMM:NF015581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HLN91129.1"
                     /translation="MRPQVLTAGRAPATRGEKTMFITVRTRKSLGEVRQRFEEAAAEN
                     RFSVLGVHDVGERLRAKGLQFDRKFYVYEVCNPAAAKKVLDTNVRIGTALPCRVSIYT
                     DGGDVVLETLKPTAMLAMFGEPTLDGTAREIETAIEAMMGAAAR"
     gene            complement(824..1030)
                     /locus_tag="VK429_04660"
     CDS             complement(824..1030)
                     /locus_tag="VK429_04660"
                     /inference="COORDINATES: protein motif:HMM:TIGR02605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdB family zinc ribbon protein"
                     /protein_id="HLN91130.1"
                     /translation="MPLYEYRCETCGQQYESYKRLTEEKKEEACPACGGRAVKMGISL
                     FTAKGSSPGGGSSCGTGPRRSPFG"
     gene            complement(1042..1233)
                     /locus_tag="VK429_04665"
     CDS             complement(1042..1233)
                     /locus_tag="VK429_04665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018200245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2892 domain-containing protein"
                     /protein_id="HLN91131.1"
                     /translation="MNVERWIRVIAGTFVLVSLGLGWYVSPWFLLFTAFVGLNLFQSG
                     WTNWCLMEKILIKFGVPER"
     gene            complement(1454..1564)
                     /locus_tag="VK429_04670"
     CDS             complement(1454..1564)
                     /locus_tag="VK429_04670"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLN91132.1"
                     /translation="MLRALEEHRWNKGAAAATLGIDRSTLWRKMKRLGIA"
BASE COUNT          297 a          578 c          470 g          271 t
ORIGIN      
        1 aagcccgcgg ggggcgctcc atcgaatcga gacgccgggc gagctcctcg acccggtccg
       61 acaggagccg gatttcatcg aagggaagag cgggagggga tccgaccccc ggatgacggc
      121 gcgctgcgac gaaagtgacc gccgccgtga cgacgacggc gaacgcgacc caggtcagca
      181 gccccgccca ccagttccct gcaaacatcg cgacgccgca ctccatccgc attcctcccg
      241 ttcccggctc tccgtcaccg ggccgccgcg cccatcatcg cttcgatcgc cgtctcgatc
      301 tcccgggcgg tcccgtcgag ggtcggctcg ccgaacatgg ccagcatcgc ggttggcttc
      361 aacgtctcga ggacgacatc tccaccgtcc gtatagatcg agacccggca cggcagcgcg
      421 gttccgatcc ggacgttcgt gtcgagcacc tttttcgccg ccgcggggtt gcacacctcg
      481 tacacgtaga acttccggtc gaactgcaat cctttggcgc gaagccgctc ccccacatcg
      541 tggacgccga ggacagagaa ccggttttcc gccgcggcct cctcgaaccg ttgccggacc
      601 tcccccaggg atttccgcgt acgcaccgtg atgaacatcg tcttctcccc tcttgtcgcc
      661 ggcgcacggc cggcggtcag cacctggggc ctcaaccgcc ccccgaaccg ccccgaagca
      721 gaaacacgac gaagaccgcg gcgaacagga tcaacgggaa ccagtcagcc gacatgggaa
      781 cacctcatgg tctgcccggc gaccgccggg ccgtcggtca cgctcacccg aacggcgagc
      841 ggcgcgggcc ggtgccgcag gaggaaccgc cccctggcga actccccttc gcggtgaaca
      901 gggagatccc catcttcacc gcgcggccgc cgcacgcggg gcacgcctct tctttcttct
      961 cctcggtcag ccgcttgtac gactcgtact gctgaccgca cgtttcgcac cggtactcat
     1021 acagaggcat cgttcttccc cctatctctc gggcacgccg aatttgatca agatcttctc
     1081 catcaggcac cagttcgtcc accccgactg gaacaggttg agccccacga aagcggtgaa
     1141 cagcaggaac cagggagaaa cgtaccaccc cagcccgagg ctcaccagca cgaaggtccc
     1201 cgcgatcacc cggatccacc gttcaacgtt catcgcatcc ccccctttcc ccgcccggta
     1261 tgtcgatccc gggagtcttt cgttgcggaa gggtactgca tttgcggtgc caatcccggg
     1321 aaacgaacgg atgaaacata agtacttgaa cgggtacaca aatcttgaaa cgagcgaaaa
     1381 agggtggtgg gaccggctcc ttggatgacg cacgtttcgt ttcagcgtgt gcaacattat
     1441 ggggcggcaa gggtcaggcg atgccgaggc gcttcatctt ccgccagagg gtggaacggt
     1501 cgatccccag cgttgctgcg gctgctccct tgttccaccg gtgctcctcg agcgcccgaa
     1561 gcaggtgatc cctctccccg gtcgggacgt cgcccgtcgg tcgatggagg gcatct
//
LOCUS       DATGYW010000334         3526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_404474, whole genome shotgun sequence.
ACCESSION   DATGYW010000334 DATGYW010000000
VERSION     DATGYW010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3526
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404474"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1093)
                     /locus_tag="VK429_04675"
     CDS             complement(<1..1093)
                     /locus_tag="VK429_04675"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HLN91133.1"
                     /translation="MDTVTHGLTGCLIARALPDKWKGEHPAIATAVVALGSVLPDADN
                     AASLLGSELYLRVHRGLSHSLLGISVTSLVVALLFARFGRWKDAKRLYLLALLGQASH
                     IVLDLLNAYGTQVLQPFSDARLSLDLLFVVDLVFTGIVIAGIAWSRGGRVGPARVAMA
                     SLVIYVGIAALLHGRAVDLVRDAAVRSGVRVVAVSALPQLPSVPLPSMDQLGFATPAV
                     ASPVQKDLPGSRASVENRTVPFPAGPLSWNGFVDDGRTFLRAEVDPLAGTLQWKQREL
                     RGPDVPEVRAVRGLADVETYLWFARFPAASVAFDHGRTEVTFYDMRFSGMPGRGPFLL
                     RVIETPGATATTTSAPTARRCSRCRRPPTT"
     gene            complement(1095..2477)
                     /locus_tag="VK429_04680"
     CDS             complement(1095..2477)
                     /locus_tag="VK429_04680"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020674801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006108 - malate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HLN91134.1"
                     /translation="MTDFRVEKDSMGEVRVPAKAYFGAQSQRAVENFPVSGQGMPMPV
                     VHAVALVKGFAAEVNAGLGVLPAPLAEAISRAAREVLEGTYDDQFVVDVFQTGSGTST
                     NMNVNEVLANRANELLGEPLGGNAPVHPNDHVNRCQSSNDVIPSAIRIAARRELSDRL
                     LPALAALRDALSGKAAEFSDVLKIGRTHLQDAVPVTLGQEFSGYASQVDHGIRRLRAT
                     FADLEELPLGGTAVGTGLNAHPEFAARTIAEIARSTGIPFRPAENRFEAMGAQDPLVA
                     ASGALKGVAASLMKISHDLRLLSSGPRCGIGEISLPPLQPGSSIMPGKVNPVILEVAI
                     QVAAQVIGNDAAVTLGGGLGVLELNVMLPVMARNLLESVALLSASTALLAARCVAGIA
                     PNRARCAELIEQSLAMVTPLAVRIGYNNAAELAHEAYHGGKTIRALLSEKGVLTADEI
                     DRILDPRTMI"
     gene            complement(2574..3215)
                     /locus_tag="VK429_04685"
     CDS             complement(2574..3215)
                     /locus_tag="VK429_04685"
                     /EC_number="4.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF012696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HLN91135.1"
                     /translation="MRKLIAGIHRFRKLHWSANQELYRRLAEHGQFPEALFITCSDAR
                     VDPVTITHGQPGDLFIVRNIGNFVPPYSENLLESTGVAAAVEYAVEHLQVRDIIICGH
                     SDCGAIKALYKDREKFAATPHIGQWLRHGDRTMAVVAANYPELSREERFEITAEENVL
                     LQMENLRTYPVVLKATREGRLHVHAWYYVIDTGTVFRYSPEKEQFEPIREEEG"
BASE COUNT          604 a         1227 c         1132 g          563 t
ORIGIN      
        1 tcgtggtcgg tggtcggcgg caccttgagc agcgccgagc cgttggcgcc gaggtcgtcg
       61 tcgcggtcgc gcccggggtt tcgatcacgc ggaggaggaa gggaccgcgc cccggcatcc
      121 cggagaaccg catgtcgtag aaggtgactt ccgtgcggcc gtggtcgaac gcgacgctcg
      181 ccgcggggaa ccgggcgaac cagagatacg tctccacgtc cgccaatccg cgcaccgcgc
      241 ggacctccgg gacgtcgggg ccacgaagct cgcgctgttt ccactgcagc gtccccgcca
      301 gagggtcgac ctccgcccgc aggaacgtcc gcccgtcgtc cacgaacccg ttccaggata
      361 gcggcccggc cggaaacgga accgttctat tctccaccga agcccggctt ccgggaaggt
      421 ccttctgcac cggggaggcc acagccggag tcgcgaaccc gagctggtcc atggagggga
      481 gcggcacgga aggaagctgc gggagcgccg acaccgcgac cacgcgaacc cccgatcgga
      541 cggcggcatc ccgcacaagg tccaccgcgc gtccgtggag cagcgccgcg atccccacat
      601 agatcacgag agaagccatc gcgacacgcg cggggccgac cctgccgccg cgggaccagg
      661 cgatcccggc gatgacgatg ccggtgaaaa caaggtccac gacgaagagg aggtccagtg
      721 acagccgggc gtcggagaac ggctggagga cctgcgtccc gtaggcgttc aggagatcga
      781 gaacgatgtg ggaggcctgg ccgagaagag ccagcagata gaggcgcttc gcgtccttcc
      841 accgcccgaa gcgggcgaac agcagcgcca cgacgagaga ggtaacggag atcccgagga
      901 gggaatggga gaggccccgg tggacgcgca ggtacagttc gctccccagc agggacgccg
      961 cgttgtcggc gtcggggaga acggacccga gggcgacgac ggcggtggcg atcgccgggt
     1021 gctccccttt ccacttgtcc ggaagcgccc gtgcgatgag gcaaccggtc aggccgtggg
     1081 taaccgtgtc catgtcagat catcgtccgc gggtcgagga tccggtcgat ctcgtccgcg
     1141 gtgagaaccc ccttttccga aagcagcgcg cggatcgtct tccccccgtg gtacgcctcg
     1201 tgggccagct ccgccgcgtt attatatccg atccggaccg caagcggggt caccatcgcc
     1261 aggctctgct cgatcagctc cgcgcaccgc gcccggttcg gcgcgatccc ggcgacgcac
     1321 cttgcagcga gcaacgccgt cgacgcggag aggagcgcga ccgattcgag caggttgcgc
     1381 gccatcaccg gcagcatcac gttcagttcg agcacaccca accctcctcc gagggtcacc
     1441 gccgcatcgt tcccgatcac ctgcgcagcc acctggatcg caacctcgag gatcaccggg
     1501 ttgactttcc ccggcatgat cgaggagccc ggctgcaacg gcggcaggga gatctccccg
     1561 atcccgcacc gggggccgga cgacaggagc cgcaggtcgt gggagatctt catcagggac
     1621 gccgccacgc ccttcagcgc gccgctggcc gccaccagcg gatcctgcgc ccccatcgcc
     1681 tcgaaccggt tctccgccgg gcggaacggg atgccggtcg aacgggcgat ctccgcgatc
     1741 gtccgcgcgg cgaactccgg gtgggcgttc aaccccgtcc ccacggcggt gccgccgagc
     1801 ggcagctctt cgaggtccgc aaacgtagcc cgtagtcgcc ggatcccgtg gtcgacctgg
     1861 gaggcatacc ccgagaactc ctgccccagc gtcaccggga ccgcgtcctg caggtgcgtc
     1921 cgcccgatct tcaggacgtc ggagaactcg gccgccttcc cggaaagggc gtcccgcaac
     1981 gcggcgagcg ccgggaggag ccggtcggaa agctcccggc gggccgcgat ccggatcgcc
     2041 gacgggatca cgtcgttgct cgactggcac cggttcacgt ggtcgttcgg gtggaccggg
     2101 gcgtttcccc ccagtggctc cccgagcagt tcgttcgccc ggttcgccag cacctcgttc
     2161 acgttcatgt tcgtggaggt gccggagccg gtctggaaga cgtcgaccac gaactggtcg
     2221 tcgtacgttc cctcgagaac ctccctggcg gcgcgggaga tcgcctccgc caggggagcc
     2281 gggagaaccc ccagccccgc gttgacctcc gccgcgaacc ctttcaccag cgcgacggcg
     2341 tggaccacgg gcatcggcat cccttgcccg ctgaccggaa aattctccac cgcccgctgc
     2401 gactgggccc cgaaatacgc cttcgccggg acgcgaacct cgcccatcga atccttctcg
     2461 acccggaaat ccgtcatccc gcgttcccct cgcttggcgg cataatttct tctcaattca
     2521 attagattcc atcaggattg cgccaggttc agggtgtacc ggcccggccc cggctaccct
     2581 tcttcctccc ggatcggctc gaactgctcc ttttccggag agtaccggaa gaccgtcccg
     2641 gtgtcgatca cgtagtacca ggcgtgaaca tggagccgcc cttcccgcgt cgccttcagg
     2701 acgacgggat aggtccgcag attctccatc tggaggagga cgttctcctc ggccgtgatc
     2761 tcgaaccgtt cctcccgcga cagttccggg tagttcgcgg cgaccaccgc catcgtccgg
     2821 tccccatgcc gcagccactg accgatgtgg ggggtggcgg cgaatttctc ccgatccttg
     2881 tagagcgcct tgatcgcccc gcagtcggag tgaccgcaga tgatgatgtc ccgcacctgc
     2941 aggtgctcca cggcgtactc caccgccgca gccaccccgg tgctctcaag cagattctcc
     3001 gagtacggcg ggacgaagtt cccaatgttc cggacgatga agaggtcccc cggctgcccg
     3061 tgggtgatcg tcacgggatc gacccgggcg tcggaacagg tgatgaacag cgcctcgggg
     3121 aactgcccgt gctccgccag ccgccggtac aactcctggt tcgcgctcca gtgcagcttc
     3181 cggaaccggt ggatcccggc gatcagcttc cgcatggcga aggttcctcc ctgccggcaa
     3241 tattgcctga tgatacaacg ttctacagtg cattcggccg aaattatttc gctcttgacc
     3301 tgcatcaatg cggggagaat gatagctcca tagtattccc tcccatcgat tgaattcgcg
     3361 gcgtggcgat cgtcaaccaa cgaaacgacc ggcggcttgt tcgccgggaa cctctgggag
     3421 gggaaggatg accaagaaga ccgccttctg gattttcctg atcggcacga tctcctcggc
     3481 tgtcgtgttc ctcgctgcca cctacgatac ccaccggcag gtgggg
//
LOCUS       DATGYW010000335         3402 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_243913, whole genome shotgun sequence.
ACCESSION   DATGYW010000335 DATGYW010000000
VERSION     DATGYW010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3402
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243913"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..701)
                     /gene="ccoO"
                     /locus_tag="VK429_04690"
     CDS             complement(<1..701)
                     /gene="ccoO"
                     /locus_tag="VK429_04690"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012466719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HLN91136.1"
                     /translation="MKIDSLYEKPVLFAIAAAVVISVGTLVTTFIPLFLPSTQPVSPL
                     ITPYTAVETEGRDIYIREGCNNCHTQTVRPLRTEVARYGDYSRPEESAWDRPFLWGSR
                     RTGPDLARAGGKYPDAWHYRHMANPQAMFSTSNMPAYPGLANAKLDTSLTARKVKTLG
                     YGYDAAEVARQLAAFRETVTAPTYPSAQVRSQVTPAALRGEVTELDAMVAYLQKLGRD
                     LKAARKPVAGPAAAEA"
     gene            complement(705..2093)
                     /locus_tag="VK429_04695"
     CDS             complement(705..2093)
                     /locus_tag="VK429_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015719435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HLN91137.1"
                     /translation="MTNGARTRSDSIVRGFALSSVFWLLVGLVVGLWLAAEMIYPALN
                     LAPWLAFGRLRVVHTNGLIFGFTIAGIFACSYYILEKLTRTPLAFPGLAKAQLWLFNI
                     AIALAALSLFAGMNTSKEYSELEWPLDIVVVVLWVMFAVNVMGTLVKRREKQMYVSLW
                     FLIACVVTVAVVYILNNLAIPVSLSKSYSAYAGVNDANVQWWFGHNAVASVFTFPILA
                     MFYYFLPKSTGLPIYSHRLSIIAFWSLVFGYLWTGAHHLMLTPVPEWIQTVALAFSLF
                     LIAPSWASVINGFYTMNGNWEKMKSNYLVKFFILGITFYGLQTIQGPTQAIRALSGHL
                     HYTEYIPGHVHMGTMGWVTMVITASMYFMMAKIAGREIHSVKLANVHFWLILVGQLLF
                     TVTLWIAGIVQGAMWKATNPDGSLMYTFLDSVTAMYPYWTVRLGGGLLYFAGIAVFAY
                     NLYMTSRKPQAV"
     gene            2285..>3402
                     /locus_tag="VK429_04700"
     CDS             2285..>3402
                     /locus_tag="VK429_04700"
                     /inference="COORDINATES: protein motif:HMM:NF024586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HLN91138.1"
                     /translation="MVLPAIQCVSAIFQFIAAWQSVVFLSTGRLGRVWSFVSLALFLK
                     GLLSVWELFSSPWSTTTSFADQTVVIAEFFISLLLASGFLLTGQWFRFRERLEARFAL
                     IAEVERSLVGVLEEEKILSLVCGILSRTRGYRLVWVGTAEADGTIRVECSAGDAAEFL
                     GGVALRWDDTPAGQAPPGNALRTGGTITARVVDGGLPTEWREGCRQHGLGSCAAARIE
                     QHGFPHKVLVVHADTATSFDGVETEALAAMARRVGSAIQGARRHEIFVNAKASYDELL
                     RNQRDGVILVREGKVVRANPAAAVMLGYASPGLLFDADPGSILAEPDAVAGLRDELRG
                     PGMGEPRSEWEASLLRMDGSTFPGEIRITWTPREDRSNT"
BASE COUNT          588 a         1066 c         1162 g          586 t
ORIGIN      
        1 gcctctgcgg ccgcgggccc cgcgaccggt ttccgggccg ctttcaggtc ccgccccagc
       61 ttctggagat acgccaccat ggcgtcgagt tcggtgacct ccccccgaag ggcggccggg
      121 gtcacctggg agcggacctg cgcggacgga taggtcggcg ccgtgaccgt ctcccggaag
      181 gcggccagct ggcgggcgac ctccgccgcg tcgtagccgt atccgagggt cttcaccttc
      241 ctggccgtga gggaggtgtc gagcttcgca ttcgcgagtc ccgggtacgc cggcatgttc
      301 gacgtggaga acatcgcctg cgggttcgcc atgtggcggt aatgccacgc gtcggggtac
      361 tttccccccg cgcgggcgag gtcgggaccc gtgcgccgcg agccccaaag gaacggccga
      421 tcccaggccg actcctcggg cctggagtag tcgccgtacc gcgcgacctc ggtgcgcagc
      481 ggccggaccg tctgggtgtg gcaattgttg cacccttccc ggatgtagat atccctccct
      541 tccgtctcga ccgccgtgta cggcgtgatc agggggctca ccggctgggt cgacgggagg
      601 aagaggggga tgaaggtggt gaccagcgtg ccgacggaga tgacgactgc cgccgcgatg
      661 gcgaagagaa ccggcttttc atagaggctg tcgattttca tcggtcacac cgcctggggc
      721 ttgcgggacg tcatgtaaag gttgtaggcg aagaccgcga ttccggcgaa gtagagaagg
      781 ccgccgccga gccgcacggt ccagtacggg tacatcgccg tcacggagtc gaggaacgtg
      841 tacatgaggg atccgtcggg gttggtggcc ttccacatcg caccctggac gatgcccgcg
      901 atccacaggg tcacggtgaa gaggagttgc cccacgagga tcagccagaa atggacgttc
      961 gcaagcttca cgctgtggat ctcccggccg gcgatcttcg ccatcatgaa atacatcgac
     1021 gccgtgatga ccatcgttac ccaccccatc gtccccatgt ggacgtggcc ggggatgtat
     1081 tccgtgtagt ggaggtggcc ggagagcgcc cggatcgcct gggtcggtcc ctggatcgtc
     1141 tggagcccgt agaaggtgat gccgaggatg aagaacttga ccaggtagtt cgacttcatc
     1201 ttctcccagt tcccgttcat cgtgtagaag ccgttgatga ccgaggccca ggagggggcg
     1261 atgaggaaca ggctgaacgc gagcgcgacc gtctggatcc attccggaac cggggtcagc
     1321 atcaggtggt gcgccccggt ccacaggtag ccgaagacga gggaccagaa agcgatgatg
     1381 gagaggcggt ggctgtagat cggcagaccc gtcgacttcg gcaggaagta gtagaacatc
     1441 gcgaggatcg ggaaggtgaa gaccgaggcg acggcgttgt gcccgaacca ccactgcacg
     1501 ttggcgtcgt tcaccccggc gtacgccgag tacgacttgg agaggcttac cgggatcgcg
     1561 aggttgttga ggatgtagac caccgccacc gtgacgacgc aggcgatcag gaaccagagg
     1621 gagacgtaca tctgcttctc ccgccgcttg acgagcgtcc ccatcacgtt cacggcgaac
     1681 atcacccaca ggaccaccac cacgatgtcg aggggccact cgagctccga gtactccttg
     1741 gaggtgttca tcccggcgaa cagggagagt gccgcgaggg cgatggcgat gttgaacagc
     1801 cagagctggg ccttcgcgag gcccgggaac gcgagcgggg tccgggtcag tttttccaga
     1861 atgtagtaac tgcaggcgaa gatcccggcg atggtgaacc cgaagatcag cccgttggtg
     1921 tggaccacgc gcaggcgccc gaacgcgagc caaggcgcaa ggttgagtgc cgggtagatc
     1981 atctcggccg ccagccacag cccgaccacc agcccgacca gcagccagaa caccgaggag
     2041 agggcgaacc ccctcacgat ggagtcgctt cgtgttcgtg ccccgttcgt catccgcatc
     2101 tcctgttgga gaaagtgtcg acagtataaa atactccgga ttcatccgcc atagcgtgcg
     2161 gcgtcccctc cggtttgata gaatgccgtc cgatcaggga aaccccctga agttccgggc
     2221 gcgttccgcc gataggcata acgggagaag ttcgcgaaag aaatcgaggg agtggaactg
     2281 ccggatggtg cttcccgcga tccagtgcgt ctcggcgatc ttccagttca tcgccgcgtg
     2341 gcaatccgtc gtgtttctct cgaccggccg gctcggccgt gtctggtcct tcgtctccct
     2401 ggccctcttc ctcaaggggc ttctctcggt ctgggaactc ttctcctcgc cctggtccac
     2461 gaccacgtcg ttcgccgacc agacggtcgt gatcgccgaa ttcttcatct cccttctcct
     2521 cgcctcgggc ttcctcctca ccggtcaatg gttccgcttc agggagcgcc tcgaggcgcg
     2581 gttcgccctg atcgccgagg tggagcgctc cctggtgggc gtcctggagg aggagaagat
     2641 tctctccctg gtgtgcggca tcctctcccg cactcgaggg taccgcctcg tttgggtggg
     2701 aaccgccgaa gccgacggaa cgatccgcgt ggagtgcagc gcgggggacg ccgcggagtt
     2761 tctcgggggg gtcgctctcc gctgggacga cacgcccgca gggcaggcgc cgcccggaaa
     2821 cgccttgcgg accggcggta cgatcaccgc gagggtagtc gacggcgggc tccccaccga
     2881 gtggcgggag ggttgccggc agcatgggct cggttcctgc gccgcggccc ggatcgaaca
     2941 gcacggcttc ccgcacaagg ttctcgtcgt gcacgccgac acggccacat ccttcgacgg
     3001 ggtcgagacg gaggcgctcg ccgcgatggc ccggcgggtg ggaagcgcga ttcagggggc
     3061 aaggcgccac gagatcttcg tcaacgcgaa ggcgtcctac gacgaactgc tccggaacca
     3121 gcgtgacggc gtcatcctcg tgcgcgaggg aaaggtggtg cgcgccaatc ctgctgcggc
     3181 cgtgatgctc ggatacgcgt ccccggggtt gctgttcgac gccgacccgg gttcgatcct
     3241 ggcggagccc gacgcggtgg ccggcctgcg ggacgaattg cgggggcccg gcatggggga
     3301 gccccggagc gagtgggaag cctctctcct tcggatggac ggctcgacct tcccggggga
     3361 gatccgtatc acctggacgc cccgggaaga ccggtccaac ac
//
LOCUS       DATGYW010000336         2369 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_22767, whole genome shotgun sequence.
ACCESSION   DATGYW010000336 DATGYW010000000
VERSION     DATGYW010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22767"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..600
                     /locus_tag="VK429_04705"
     CDS             <1..600
                     /locus_tag="VK429_04705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006001426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HLN91139.1"
                     /translation="AKVLQIRSVEFGMKYGVRIHVRSSFNDNPGTIVTTEEEIMETAV
                     VSGVAYSKNEAKITVVKVPDRPGIAAKIFKPLSEANIVVDVIVQNVSVTGFTDLTFTI
                     GRTDFKKAMQITEKAAKDVGAERVVGDDKIAKVSVVGMAMRSHSGVALKLFETLAAEG
                     INILGISTSEIKVSVLIEEKYTELAVRVLHGAFGLGNPA"
     gene            650..2239
                     /gene="cimA"
                     /locus_tag="VK429_04710"
     CDS             650..2239
                     /gene="cimA"
                     /locus_tag="VK429_04710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004511965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043714 - (R)-citramalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citramalate synthase"
                     /protein_id="HLN91140.1"
                     /translation="MKTVYLYDTTLRDGTQSEEISLSVLDKVAIAEKLDEFGIHYIEG
                     GYPGSNPKDKEFFERARKMRWKNSVMCAFGMTRRVGKKVDEDANMKALVAAGTPVITV
                     VGKSWDFHVIEALRTTLEENLHAVKDTVEYLKKNADKVFFDAEHFFDGYRLNPKYAMK
                     VLAAAVDAGADALVLCDTNGGALPSDIARIVKEVRKATSTAIGIHTHNDGEMAVANTL
                     AAVESGANQVQGTINGYGERCGNANLVSILPALMLKMGREVLPKGQLRKLTDLSRYVA
                     EVANVGQWLHAPYVGNAAFAHKGGMHVSAIRRHTKTYEHVEPETVGNHRRVLISDLSG
                     RSNILSKIQETGLKFKANDPNTEKILDEIKELEHKGFQFEGADASFELLARRAMGEHE
                     PFFELMGFRVIDEKRTEGEEPIAEATIRIAVDGKAEHTAALGNGPVNAMDNALRKALE
                     KFYPEVAEVKLLDYKVRVIRQGGTGSSVRVLIKSGDRDEIWGTVGVSHNIIEASWQAL
                     VDSIRYKLWRTRRADSGEQGE"
BASE COUNT          480 a          689 c          840 g          360 t
ORIGIN      
        1 gccaaggtgc tgcagatccg ctcggtggag tttgggatga agtacggggt gcggatccac
       61 gtccgctcct cgttcaacga taacccggga acgatcgtga cgacggagga ggagatcatg
      121 gaaacggcgg tggtgtccgg cgtggcgtac agcaaaaacg aggcgaagat cacggtggtc
      181 aaggtccccg accgcccggg gatcgcggcg aagatcttca agccgctgtc ggaagcgaac
      241 atcgtggtcg acgtcatcgt ccagaacgtc tcggtcacgg gattcacgga cctgacgttc
      301 acgatcgggc gcaccgactt caagaaggcg atgcagatca cggaaaaggc ggcgaaggac
      361 gtgggggccg agcgggtcgt gggggacgac aagatcgcca aggtctccgt cgtcggcatg
      421 gcgatgcgtt cccattccgg cgtggccctg aagctgttcg agacgctggc tgcggagggg
      481 atcaacattc tcgggatctc cacctcggaa atcaaggtct ccgtcctcat cgaggagaag
      541 tacaccgagc tggccgtgcg cgtgctccac ggggcgttcg gattggggaa ccccgcctga
      601 cgacggcgca tcgaattttg ataacgagat cggaagggcg ggacgccgaa tgaagaccgt
      661 atacctgtac gacacgacgc tgcgggacgg gacccagtcc gaggagatct ccctgtccgt
      721 gctcgacaag gtcgcgatcg ccgagaagct ggacgagttc ggcatccact acatcgaggg
      781 cggctatccc ggcagcaacc cgaaggacaa ggagttcttc gagcgggcgc gaaagatgcg
      841 ctggaagaac tcggtcatgt gcgccttcgg gatgacccgc cgggtgggga agaaggtcga
      901 cgaggacgcc aacatgaagg cgctcgtcgc cgcggggacg ccggtcatca cggtggtggg
      961 gaagtcgtgg gacttccacg tcatcgaggc gctgcgcacc accctcgagg agaacctgca
     1021 cgccgtcaag gacacggtgg agtacctgaa gaagaacgcc gacaaggtct tcttcgacgc
     1081 ggagcatttc ttcgacgggt accggctcaa cccgaaatac gcgatgaagg tgctggcggc
     1141 cgcggtcgac gcgggggccg acgccctggt cctgtgcgac acgaacggcg gcgcgctccc
     1201 gtccgacatc gcgcggatcg tgaaggaggt gcgcaaggcg acctccacgg cgatcgggat
     1261 ccacacgcac aacgacggcg agatggcggt ggccaacacg ttggcggccg tggagagcgg
     1321 cgccaaccag gtgcagggaa cgatcaacgg gtacggggaa cggtgcggaa acgcgaacct
     1381 ggtctcgatt ctccccgcgc tgatgctcaa gatggggagg gaggtccttc cgaaggggca
     1441 gctgcggaag ctgaccgacc tttcgcgcta cgtggccgag gtggccaatg tcgggcaatg
     1501 gctccacgcg ccgtacgtcg ggaacgcggc gttcgcgcac aaggggggga tgcacgtctc
     1561 cgccatccgc cggcacacga agacgtacga gcacgtcgag cccgagacgg tgggaaacca
     1621 ccggcgggtc ctgatctccg acctttccgg gcgcagcaac atcctctcga agatccagga
     1681 gacggggctc aagttcaagg cgaacgaccc caacaccgaa aagatcctcg acgagatcaa
     1741 ggagctcgag cacaaggggt tccagttcga gggggcggac gcctcgttcg agctgctggc
     1801 ccgccgcgcg atgggggagc acgagccgtt tttcgaactg atggggttcc gggtgatcga
     1861 cgaaaagcgg accgagggcg aggagccgat cgccgaggcg acgatccgga tcgccgtcga
     1921 cggcaaggcg gagcacacgg cggcgctggg gaacggtccg gtgaacgcca tggacaacgc
     1981 cttgcggaag gcgctggaga aattctaccc cgaagtggcc gaggtgaagc tcctcgacta
     2041 caaggtccgc gtgatccgcc agggggggac cggctcctcg gtacgcgttt tgattaaatc
     2101 cggcgacagg gacgagatct ggggcaccgt gggcgtgtcg cacaacatca tcgaggcgtc
     2161 ctggcaggcc ctggtggaca gcatccggta caaactgtgg aggacgcggc gtgccgattc
     2221 aggggagcag ggagagtagc ggcgggaagc gacgcgccgt ccttcttctt tccctgatcc
     2281 tgctggtctg gaatgcgttc gccacagcgc agcgcttcgt cccggtcggg cttctccctt
     2341 cggtggaccg ggccgacggc tctccggtc
//
LOCUS       DATGYW010000337         1850 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_22866, whole genome shotgun sequence.
ACCESSION   DATGYW010000337 DATGYW010000000
VERSION     DATGYW010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1850
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22866"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1092)
                     /locus_tag="VK429_04715"
     CDS             complement(<1..1092)
                     /locus_tag="VK429_04715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014809850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN91141.1"
                     /translation="MLSKRMKWHGMVAIGLALVLGLADVALAAEKIVIGGMYPMTGRG
                     GRYGLDSVAAAEIAMEEINAKGGVNGRMIDLIFTDDKSNTSYAVKVANRYIKEDKVNF
                     LMGVVSSAVGLAVTEVSKENKIIFVGTDHASTALTMEKFQPYYFRVSNNTYQSAAAAA
                     MYATDKKEWKKYYVIGPDYEYGHRTWEDFWMLLGKKRNDVKMVGQAWPKLYEPDYTPY
                     ITAILNAKPDVLVTSFWGGDTVAFIKQALPYKLFDKMKMFNYDGGGNYEVLEALPNTL
                     PKGLVLSARHHNNWPDTKENKEYVEKFKAKTGRYPSYAAEGAYAGVYFIAEGVRQAGT
                     AEDADKLVSVMEKMKFKLPEDPPGFTSYMR"
     gene            complement(1121..>1850)
                     /locus_tag="VK429_04720"
     CDS             complement(1121..>1850)
                     /locus_tag="VK429_04720"
                     /inference="COORDINATES: protein motif:HMM:NF015214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase C-terminal
                     domain-containing protein"
                     /protein_id="HLN91142.1"
                     /translation="EDGTIDCGTEWGVVGGESTLIFEDVFVPNERVFMDGEGEFAGSL
                     VDRFSAWHRANYGGCKGGNADVLLGATALLAEIHGTIKNSIVRDKLTEIVHLVETNFA
                     GAIGSSALGKRLPAGNWLVDPLLANTVKQNVTRFVYQVGRLTHDIAGGLLSTLPSDAD
                     FQSSEVGGLLEKYFAGKQGFSTEDKRKLCRYIEGMTSVSTLVEALHGAGSPQAQRIVM
                     LRQADLPEKTRQAKKVIGLGKERK"
BASE COUNT          276 a          691 c          493 g          390 t
ORIGIN      
        1 ccgcatgtag gacgtgaagc cgggcggatc ctccggcaac ttgaacttca tcttttccat
       61 caccgacacc agcttgtcgg catcctccgc cgtccccgcc tggcggaccc cttcagcgat
      121 gaagtacact cccgcgtacg ccccttccgc cgcgtacgac gggtaccgcc ccgtcttcgc
      181 cttgaacttc tccacgtact ccttgttctc cttggtgtcg ggccagttgt tgtggtgccg
      241 agcgctcagg accagccctt tgggcagcgt gttgggcagc gcctcgagga cctcgtagtt
      301 cccgcccccg tcgtagttga acatcttcat cttgtcgaac agcttgtacg gaagcgcctg
      361 cttgatgaac gccacggtgt cgccgcccca gaagctggtg accaggacgt cgggcttggc
      421 gttcaggatc gccgtgatgt agggggtgta gtccggctcg tagagcttcg gccacgcctg
      481 cccgaccatc ttcacgtcgt tgcgcttctt gcccagcagc atccagaaat cttcccaggt
      541 ccggtgcccg tactcgtagt ccggtccgat cacgtaatac ttcttccact ccttcttgtc
      601 cgtcgcgtac atcgcggcgg ccgcggcgga ctggtacgtg ttgttcgaca cgcggaagta
      661 gtacggctgg aacttctcca tcgtcagcgc cgtggaggcg tggtcggtcc ccacgaagat
      721 gatcttgttc tccttcgaca cctcggtgac cgcgagcccg accgcgctgc tgaccacccc
      781 catcaggaag ttgaccttgt cctccttgat gtaccggttc gccaccttca ccgcgtacga
      841 ggtgttggac ttgtcgtccg tgaagatcag gtcgatcatc cggccgttga caccgccctt
      901 cgcgttgatc tcctccatcg cgatctccgc cgccgccacc gagtccagcc cgtaccgccc
      961 gccgcggccc gtcatcggat acatcccgcc gatgacgatc ttttccgccg ccagcgccac
     1021 gtcggccagc cccaggacca gcgccaggcc gatcgccacc atcccatgcc acttcatcct
     1081 tttgctcagc atctctttcc acctccctgg atttgctact ctatttcctt tccttcccca
     1141 ggccgatcac cttcttcgcc tggcgcgtct tctccggcag gtccgcctgt cgcagcatca
     1201 cgatccgctg cgcctgcggg gaaccggccc cgtgcagcgc ctccaccagc gtggacaccg
     1261 acgtcatccc ctcgatgtac cggcacagct tccgcttgtc ctccgtcgag aacccctgct
     1321 tcccggcgaa atatttctcc agcagcccgc ccacctcgct gctctggaaa tccgcgtcgg
     1381 acggcagggt cgacaggagc ccccccgcga tgtcgtgcgt gagccgcccc acctggtaca
     1441 cgaaacgggt cacgttctgc ttcaccgtgt tcgccaggag cgggtccacc agccagttcc
     1501 ccgcggggag ccgtttcccc agcgcggagg aaccgatcgc ccccgcgaag ttcgtctcca
     1561 cgaggtggac gatctcggtg agcttgtccc gcacgatgct gttcttgatc gtcccgtgga
     1621 tctcggccag cagggcggtc gcgccgagga gaacgtcggc gttccccccc ttgcacccgc
     1681 cgtagttcgc ccggtgccac gccgagaacc ggtcgacgag cgatcccgcg aattcccctt
     1741 ccccgtccat gaagacccgc tcgttcggta cgaagacatc ttcgaagatc agcgtgctct
     1801 ccccgccgac caccccccac tccgtgccgc agtcgatcgt tccgtcctcc
//
LOCUS       DATGYW010000338         1822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_404726, whole genome shotgun sequence.
ACCESSION   DATGYW010000338 DATGYW010000000
VERSION     DATGYW010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404726"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..598)
                     /locus_tag="VK429_04725"
     CDS             complement(<1..598)
                     /locus_tag="VK429_04725"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLN91143.1"
                     /translation="MVDKALKDMTFEDFCRTVFNTKDTFHKPEVLKGIRAISTTQYIL
                     GPSCAAYLAELGAETIKVELPKRGEPMRHTTPFNEPFLYPLSRWMPEKGTGLGFFGAN
                     PNELFLSLDFHKPEAIQIMKRLAAKSDVSAENYRAGTFDRWGIGYRQFKDINPRMVYQ
                     WMGGFGGWGPGRNRASYDILGQAQGGCFSITGWPKEYGG"
     gene            complement(598..>1822)
                     /locus_tag="VK429_04730"
     CDS             complement(598..>1822)
                     /locus_tag="VK429_04730"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLN91144.1"
                     /translation="MTTNQIIGHWCSSHFSELGAEVIMVEPLGGDPLRKLTPFGREEY
                     MFTAQDGEKCGARFLSEARNKFSVTLNVETEEGRNLLKKIIPQVDILIENAAPGHYDK
                     LGIGYRQLSEINPRLVYLWVGQRGQWGPLKDQPGAMDPVAQCSMGFVHGTGAPVSFGG
                     TPTRSGWWLCDQVGGTFAAIGAMAALYAREKFHGKGQFVECTGAEAVIRIIDYNWGWN
                     GMDGSVRPRYGNWDLAINIYAVNPCADGQIMVGGGHDRLWFRIWRAAGKAKPFLEQHI
                     CEDPKLRVVTDRLPHYQQVETYTTLVEWMKDCTRFQCETALQEEEVASGGVSFLDEVC
                     EFPHYKYRGHVRLLDDGEYGQVLLGGSSFIGEKTPGRIKWIGRPVGKDNEDVYRGLAG
                     LNRQDLASLKKGGVI"
BASE COUNT          287 a          612 c          593 g          330 t
ORIGIN      
        1 tcccgccgta ctccttgggc catccggtga tggagaagca gccgccctgc gcctggccga
       61 ggatgtcgta cgaagcgcgg ttccggcccg gaccccagcc gccgaagccg cccatccact
      121 ggtagaccat ccgggggttg atgtccttga actgccggta cccgatcccc caccggtcga
      181 acgtccccgc ccggtagttc tcggccgaca cgtcggactt ggcggcgagg cgcttcatga
      241 tctggatcgc ctccggcttg tggaagtcca gcgacaggaa gagctcgttc gggttcgcgc
      301 cgaagaagcc cagccccgtc cccttctccg gcatccaccg ggagaggggg tagaggaacg
      361 gctcgttgaa cggggtggtg tgccgcatcg gctcgccccg cttcggcagc tcgaccttga
      421 tcgtctcggc gcccagctcg gcaaggtacg ccgcgcagga ggggccgagg atgtactggg
      481 tggtggagat ggcccggatc cccttgagga cctcgggctt gtggaacgtg tccttcgtat
      541 tgaagacggt gcggcagaaa tcctcaaacg tcatgtcctt caaggccttg tcgaccatta
      601 gatgacacct cccttcttca ggctcgccag gtcttgccgg ttcaggcccg cgaggccgcg
      661 gtacacgtcc tcgttgtcct tgccgaccgg ccggccgatc cacttgatcc ggcccggggt
      721 cttctcgccg atgaagctgg agcctccgag gagcacctgg ccgtattcgc cgtcatcgag
      781 cagccgcacg tgaccgcgat acttgtagtg agggaactcg cacacttcgt cgaggaacga
      841 cacgccgccc gaggcgactt cctcttcctg cagcgccgtc tcgcactgga accgggtgca
      901 gtccttcatc cactcgacca gggtggtgta cgtctcgacc tgctggtagt gcggaagccg
      961 gtcggtgacg acccgcagct tcgggtcctc gcagatgtgc tgctcgagga acggcttcgc
     1021 cttccccgcg gcccgccaga tgcggaacca gagccggtcg tgcccgccgc ccaccatgat
     1081 ctggccgtcg gcgcacgggt tgaccgcgta gatgttgatc gcgaggtccc agttcccgta
     1141 gcggggccgg acggagccgt ccattccgtt ccatccccag ttgtagtcga tgatccggat
     1201 gaccgcctcg gccccggtgc actcgacgaa ctggcccttc ccgtggaact tctcccgggc
     1261 gtagagggcc gccatcgcgc cgatcgccgc gaaggtgccg ccgacctggt cgcacagcca
     1321 ccaccccgaa cgggtcgggg tgccgccgaa cgacaccggc gcgccggtgc cgtggacgaa
     1381 gcccatcgag cactgggcga ccgggtccat ggcgccgggc tgatccttca gggggcccca
     1441 ctggccgcgc tggccgaccc acagatagac cagccgcgga ttgatctcgg agagctgacg
     1501 gtagccgatc ccgagcttgt cataatgccc cggggcggcg ttttcgatga ggatgtcgac
     1561 ctgcgggatg atcttcttca gaaggttgcg accctcttcg gtttcaacgt tcagggtgac
     1621 ggagaacttg ttccgggcct cggaaaggaa ccgggcgccg cacttctccc cgtcctgggc
     1681 ggtgaacatg tactcctccc ggccgaaggg ggtgagtttc cgcagcggat cgccgccgag
     1741 cggctcgacc atgatgacct cggcgccgag ctccgagaag tgcgaggagc accagtgtcc
     1801 gatgatctgg ttggtcgtca tg
//
LOCUS       DATGYW010000339         3308 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_458953, whole genome shotgun sequence.
ACCESSION   DATGYW010000339 DATGYW010000000
VERSION     DATGYW010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3308)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3308)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3308
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458953"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..922)
                     /locus_tag="VK429_04735"
     CDS             complement(<1..922)
                     /locus_tag="VK429_04735"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011938749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HLN91145.1"
                     /translation="MEWHRRHVLGLSDFHPEEMEFVIDTARSMEEVLTRDIKKVPALR
                     GKTVVNLFFEASTRTRTSFEMAGKRLSADVVNFSSSTSSVTKGETLLDTARNIEAMKP
                     NILVVRHSASGAPLFLSRHVSCSIINAGDGANEHPSQGLLDLYTILKVKGKIAGLKVA
                     IVGDILHSRVVRSDLHSLGRMGAKLWLCGPAPLVPREMERTGAVVTSDIREAVRGADV
                     IIMLRIQFERQKTSYFPSIREYSRRFGLNRDLFSIAKDDAVIMHPGPINRGVELSDEL
                     ADCDRSLVLRQVESGVAVRMALLYLLAGGSH"
     gene            complement(926..1486)
                     /gene="pyrR"
                     /locus_tag="VK429_04740"
     CDS             complement(926..1486)
                     /gene="pyrR"
                     /locus_tag="VK429_04740"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018250251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HLN91146.1"
                     /translation="MKKTGMKTLLDGKGVERVLSRLTHEIIEKNKGAGQIVLVGIASG
                     GIPLSQVIRRKIQVIEGVDVPTGFVDITLYRDDLARAGYQARMKRTEIPFSIDDKRVI
                     LVDDVLYTGRTIRAAMDALIDFGRPRNIQLAVLIDRGHRELPIRADFVGRNVPTSRTE
                     TVLVRVEGTLEEWSVLLKEDPHGKGE"
     gene            complement(1679..2350)
                     /gene="lepB"
                     /locus_tag="VK429_04745"
     CDS             complement(1679..2350)
                     /gene="lepB"
                     /locus_tag="VK429_04745"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011697408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HLN91147.1"
                     /translation="MMSELRIHAARARKGKVREYAEAFGVALIIALVVRTLLLQAFKI
                     PSSSMESTLLVGDHIFVNKFIYGYHVPYTKGRVLAFTTPKRGDIVVFVFPEDPSKDFI
                     KRVIGTPGDVVEVRQKTVFINGAPFAEGYTRFADGKQIDGFIRGRDNMPPVRVPAGKL
                     FMMGDNRDRSYDSRFWGFVDMDAVIGKAMFIYFSIDWNRGVGWTDVGRYPELVRWDRI
                     GRVLR"
     gene            complement(2351..>3308)
                     /locus_tag="VK429_04750"
     CDS             complement(2351..>3308)
                     /locus_tag="VK429_04750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010960742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HLN91148.1"
                     /translation="PTARPLPGFKVVRPMVFAGVYPLASDQYPQLRTAIDKLRLNDSS
                     FTAEPESSVALGFGFRCGFLGLLHMEIVQERLEREYDVQLITTAPTVGYRAVKVDGTV
                     LEVDSPARLPEPVELDHIEEPIIHATIHLPAEYLGNVLKLCEERRGVQRQMKFVSATR
                     VILEYELPLNEIVLDFYDKLKTASRGYASMDYEFLRFQQANLVRLDILLNGDKVDALS
                     LIVHRDNAYPKGKDVTERLRKLIPRQMFEVAIQAAIGGKIIARESVKAIRKNVLAKCY
                     GGDITRKRKLLEKQKEGKRRMKQVGSVEIPQEAFLSILKVKE"
BASE COUNT          586 a         1079 c         1009 g          634 t
ORIGIN      
        1 catgggaacc tcccgcgaga aggtagagaa gcgccatccg aacggcaacc ccggattcga
       61 cctgccgaag caccagggac cggtcgcagt cggccagttc gtcggacagc tccacccccc
      121 ggttgatcgg acccggatgc atgatcaccg cgtcatcctt cgcgatggag aaaaggtcac
      181 ggttcaagcc gaaccttcgg gaatactctc taatcgacgg aaaataagat gttttttgcc
      241 tttcaaattg gatcctcagc ataatgatga catcggcccc ccggaccgct tcccgaatgt
      301 cgctcgtcac gaccgccccg gtccgctcca tctcccgggg aacgaggggg gccggtccgc
      361 acagccacag cttcgcgccc atcctcccga gggagtggag gtccgaccgg acgacccggc
      421 tgtggaggat atccccgacg atggcgacct tgaggccggc gatcttcccc ttcaccttga
      481 ggatcgtgta gagatcgagc aggccctggg atggatgttc gttcgcgccg tcccccgcgt
      541 tgatgatgga gcaggagacg tggcgggaga ggaacagggg tgcgcccgac gcggagtgcc
      601 ggaccacgag gatgttcggc ttcatcgcct cgatgttccg tgccgtgtcg agcagcgtct
      661 cccccttcgt cacgctcgag gtgctcgaac tgaagttcac cacgtcggcg gagaggcgct
      721 ttccagccat ctcgaacgag gtccgggtcc gcgtgctggc ttcgaagaag aggttcacca
      781 cggtcttccc gcgcagggcg gggaccttct tgatgtcgcg cgtgagcacc tcttccatcg
      841 accgcgcggt gtcgatgacg aactccatct cttccgggtg gaagtcggac agtccgagga
      901 cgtgccggcg atgccattcc atgacctatt cccccttccc gtgcggatct tccttcaaga
      961 ggaccgacca ttcctccagg gtcccctcga cccgcaccag cacggtctcc gtccgggacg
     1021 tagggacgtt cctgcccacg aagtcggcgc ggatgggaag ttcccggtga ccgcggtcga
     1081 tgaggaccgc cagctggatg ttccgcgggc ggccgaagtc gatcagagcg tccatcgccg
     1141 cccgtatcgt tcggcccgta tagaggacgt cgtcgaccag gatcaccctc ttgtcgtcga
     1201 tggagaacgg gatctcggtc cgcttcatgc gcgcctggta tcccgcgcgg gccaggtcgt
     1261 cccggtagag ggtgatgtcg acgaaccccg tggggacgtc caccccctcg atcacctgga
     1321 tcttccggcg gatcacctgg gaaagcggga tcccccccga ggcgatcccg acgagtacga
     1381 tctggcccgc ccccttgttc ttctcgatga tctcgtgggt caggcgggag aggacgcgtt
     1441 ccacgccctt gccgtccagg agggtcttca ttccggtttt cttcatggtg tcgcgcccct
     1501 tgtcccggcc ggtgtgccgg cgtcgggcga aaaaaaatgc ctctccgtcg tcgcggagag
     1561 gcactgtcgt gatcggcaac tcttcatcct ttgctaacct cacgggatta gcttaaaagg
     1621 ccagtgggga tactacccct gtccccgtcc ggagtcaacg gcaaagggaa gagggacact
     1681 aacgcaaaac gcgtccgatc cgatcccagc ggacaagttc ggggtagcgc cccacgtccg
     1741 tccatccgac gccgcgattc cagtcgatgg agaagtagat gaacatcgcc ttcccgatga
     1801 cggcgtccat gtcgacgaat ccccagaagc gggagtcgta cgaccggtcg cgattgtccc
     1861 ccatcatgaa gagttttccc gcgggcacac ggacgggggg catgttgtcc ctgccgcgga
     1921 tgaaaccgtc gatctgcttc ccgtccgcga aacgggtgta gccctccgcg aaaggggccc
     1981 cgttgatgaa gaccgtcttc tgccggacct ccacgacgtc ccccggagtc ccgatgacgc
     2041 gcttgatgaa atccttgctc gggtcctcgg gaaagacgaa gacgacgatg tcgccccgtt
     2101 tcggcgttgt gaaagcgagg acccgcccct tcgtgtacgg cacatggtac ccgtagatga
     2161 acttgttgac gaagatgtgg tccccgacca ggagcgtgct ctccatggag ctcgacggga
     2221 tcttgaacgc ctgcagcagg agggtgcgga cgaccagcgc gatgatgagc gcgacgccga
     2281 acgcctcggc gtactcccgg accttcccct tcctcgccct cgccgcgtga atcctaagtt
     2341 ccgacatcat ctactccttg accttgagga tggacaggaa cgcctcttgg ggaatctcca
     2401 cggagccgac ctgcttcatt cgcctcttcc cctccttctg cttctccagg agcttccgct
     2461 tcctcgtgat gtcgcccccg tagcatttcg ccaggacgtt cttccggatc gccttcaccg
     2521 actcccgggc gatgatcttc ccgccgatcg ccgcctggat ggccacctcg aacatctggc
     2581 ggggaatcag cttccgaagt cgttccgtga cgtccttccc cttcgggtag gcgttgtccc
     2641 ggtgcacgat gagcgacagg gcgtccacct tgtccccgtt gagcaggatg tcgagccgga
     2701 ccagattcgc ctgctggaac cggagaaatt cgtaatccat cgaggcatac ccgcgggagg
     2761 cggtttttag cttgtcgtag aaatcgagaa cgatctcgtt cagcggcagt tcgtactcca
     2821 ggatcacccg ggtcgccgag acgaacttca tctgccgttg cacgccccgc cgctcctcgc
     2881 acagcttgag gacgtttccc aggtattccg ccggcaggtg gatcgtggcg tggatgatcg
     2941 gctcctcgat gtggtcgagc tccaccggtt ccggaagccg ggcggggcta tcgacctcca
     3001 ggaccgtgcc atcgaccttc accgcgcggt acccgacggt gggagccgtc gtgatgagct
     3061 gcacgtcgta ttcgcgctcc agccgttcct ggacgatctc catgtggagc agcccgagaa
     3121 aaccgcaccg gaagccgaac cccagcgcca cggagctctc cggctccgcc gtgaaggagg
     3181 agtcgttcag ccggagcttg tcgatcgccg tccgtagctg gggatactgg tcggaggcga
     3241 gcgggtagac gcccgcgaac accatcggtc ggacgacctt gaacccaggg agcggcctgg
     3301 cggtggga
//
LOCUS       DATGYW010000340         1584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_299008, whole genome shotgun sequence.
ACCESSION   DATGYW010000340 DATGYW010000000
VERSION     DATGYW010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299008"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            115..>1584
                     /locus_tag="VK429_04755"
     CDS             115..>1584
                     /locus_tag="VK429_04755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004374847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HLN91149.1"
                     /translation="MPRAAYRKYPGIRNARILILPIIALALGGCAVGPNYVRPTVDTP
                     PSWRMTDAEAKDVANSAWWGQFNDPVLDNLIRSALQENLDLQIASARVDEFAGRYGFV
                     RADLFPQVGASAAAGRQRFTEETGNTNPPGTNFTLNNYSATLNAGWELDVWGRIRRAT
                     EAARAELVASEEGRRAVILSLVGSVAGSYVNLRDLDRQLEISKETAKTRGESLGIFQL
                     RFEGGFSSEVEYVQVKSLYEEALAVIPAVEKAITLQENALCVLLGRNPGPIPRGKTID
                     QLTLPVIPAGLPSDLLTRRPDILLAEQNLIAANARIGVAKAAYFPTISLTGFFGSAST
                     DLSKLFTGPAQVWSYSAPITMPIFTAGKIAGDVQAAEAIQRQALAGYRQSIQAGFREV
                     DDSLADQARTREQLAAQGRQVEALQKYVELAQLRFDNGYTSYLEVLDAQRTLFNVQLS
                     YTQNQGVLFQALINLYKAMGGGWVTEADMLTAGATGPPPE"
BASE COUNT          282 a          569 c          509 g          224 t
ORIGIN      
        1 tccggttcgg cggcaagaaa gagggtactg ccggccacgc ggccccacca gaagggggcg
       61 gcgaaccgag tcacgccccg ccggaaaatc ccgccgggaa ggagggcggc ccccatgcct
      121 agagcagcgt atcgcaaata ccctggcatt cgaaacgcca ggatcctcat cctgcccatt
      181 atcgccctgg ccctcggcgg atgcgcggtc gggcccaact acgtgcgtcc cacggtagac
      241 accccccctt cctggcgcat gacggacgcc gaggcgaaag acgtcgccaa ctccgcatgg
      301 tggggacagt tcaacgatcc cgtcctcgac aacctgatcc gcagcgcgct ccaggagaac
      361 ctggacctgc agatcgcctc cgcgagggtc gacgagttcg ccgggcggta cggcttcgtc
      421 cgcgccgacc tcttccccca ggtcggggcc agtgcggcgg ccggccgcca acggttcacg
      481 gaggagacgg ggaacaccaa ccccccgggg accaacttca cgctcaacaa ctactcggcc
      541 acccttaatg ccggctggga gctggacgtc tggggacgca tccgtcgcgc caccgaagcc
      601 gcccgcgcgg aactcgtcgc gagcgaggaa ggccgccggg ccgtcatcct ctccctggtc
      661 ggctccgtcg ccggttccta cgtcaacctc cgcgacctcg accggcagct tgagatctcg
      721 aaggagacgg cgaagacccg cggggaatcg ctgggcatct tccagctccg gttcgagggg
      781 gggttctcct ccgaggtgga gtacgtccag gtgaagtccc tgtacgaaga ggcgttggcc
      841 gtcatcccgg cggtggagaa ggcgatcacc ctgcaggaga acgccctgtg cgttctgctg
      901 ggccgcaacc cggggccgat cccgcggggg aagacgatcg accagctgac gctccccgtt
      961 atccccgccg ggctcccctc ggacctgctc acgcgccggc ccgacatcct cctggccgag
     1021 cagaacctga tcgccgccaa tgcgaggatc ggcgtcgcga aagccgccta ctttccgacc
     1081 atcagcctga ccggcttctt cggatccgcc agcaccgacc tgtccaagct cttcactggg
     1141 cccgcgcagg tatggagcta cagcgccccg atcaccatgc cgatcttcac cgcagggaag
     1201 atcgccggcg acgtccaggc ggccgaggcg atccagcggc aggcgctggc cgggtaccgg
     1261 caatccattc aggcggggtt ccgcgaggtc gatgactccc tcgccgacca ggctcggacg
     1321 cgggagcagc tggccgccca gggcaggcag gtggaagcgc tgcagaaata cgtggagctg
     1381 gcccagctcc ggttcgacaa cggctacacc agctatctcg aggtgctcga cgcccaacgc
     1441 acgctgttca acgtccagct gagctacacc cagaaccagg gggtcctgtt ccaggccctg
     1501 atcaacctct acaaggcgat gggcggcggc tgggtgacgg aggcggacat gctgaccgcc
     1561 ggtgccaccg gcccgccgcc cgag
//
LOCUS       DATGYW010000341         1631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_78778, whole genome shotgun sequence.
ACCESSION   DATGYW010000341 DATGYW010000000
VERSION     DATGYW010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1631
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78778"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..668)
                     /locus_tag="VK429_04760"
     CDS             complement(<1..668)
                     /locus_tag="VK429_04760"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HLN91150.1"
                     /translation="MARSPRYSSVSGLSVATLLLLTVGLPLPQAASAMESVDFSQAVA
                     RALSNNAFVLGAEEEAIAARNDADAARGRLLPSVRFDEKFVRTTVPAEAFGLKLNQSQ
                     LLLSDFADVSNFNSPPPRNDFIGTLSLEQPLFAPKAYYGYGMAKVEADAKGHDLYRRK
                     EDAVYRVIAAVLDVVTARQYVDVAGQGLSDTREHLRIAESLEAAGMGLTSDVLRAKVA
                     VASA"
     gene            complement(952..>1631)
                     /locus_tag="VK429_04765"
     CDS             complement(952..>1631)
                     /locus_tag="VK429_04765"
                     /inference="COORDINATES: protein motif:HMM:NF017044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HLN91151.1"
                     /translation="VIAISGDIDAGEAIAAVRRAFGEMPQRPGYAALGALPVPSHDAA
                     VKVEERRDKQQAHFVIGYPGARFTDPDRYALDVLGSALAGMGGRLFVNLRDRKSLAYS
                     VTSFSSEQVDPGFFAFYMGTSADKLDVAIADTLSEIAGVKKDGVTREEFERAKKWMIG
                     TYEIGLQSNSSYADKMVYNELYGTGYEETFAAPEKIAAVDLSDVNRLAASVLDPAKYT
                     IAILRGK"
BASE COUNT          291 a          564 c          491 g          285 t
ORIGIN      
        1 tccgcggagg cgaccgcaac tttcgctcgc aacacatcgg aggttagccc catccccgcc
       61 gcctcgagac tctccgcgat ccgcaggtgt tccctggtat ccgagagccc ctggccggca
      121 acatcgacgt attgccgggc cgtgacgacg tcgaggaccg cggcgatgac ccgatagacc
      181 gcgtcctcct tcctccggta gaggtcgtga cccttcgcgt ccgcctcgac cttcgccatc
      241 ccgtatccgt aatacgcctt cggggcgaag agcggctgct cgagcgaaag ggtgccgatg
      301 aagtcgttgc gcggcggagg actgttgaag ttgctcacat cggcgaaatc cgacaagagc
      361 agctgtgact ggttcaactt gagcccgaac gcctccgcgg ggacggtcgt gcgcacgaat
      421 ttttcatcga accggacgga ggggagaagg cgcccccgtg ccgcgtccgc gtcgttgcgc
      481 gcggcgatcg cctcttcctc cgcccccagg acaaaagcgt tgttcgacag tgcccgggcg
      541 accgcctggg aaaaatccac cgactccatc gccgacgcgg cctgcgggag aggaagcccg
      601 accgtcagga gaagcagcgt cgcaacggac agtccggaaa cgctggaata tcgaggggat
      661 cgggccattc tcgtctcctt ggcgcagagc gcaacgattt gttgcatcgg atgcaacaac
      721 caccgttccc acgacgagac agcacattgc gtgccgccat cggtttgtgg acgcctgccg
      781 ggtattcatt tccgtgagtc gatcacccca cccacgaccg gcccggacct tcgacgaaca
      841 tgataccttc agtggggaaa gatctccatc cattgatctg catccatgga tcgaacgcgg
      901 caggccccat ccggggggaa tcgcggggtg cgcgcaatcg ggggcgcgga gttatttgcc
      961 ccgcaggatc gcgatggtgt acttcgccgg atcgaggacc gaggcggcga ggcggttcac
     1021 gtccgaaagg tcgaccgccg cgatcttttc cggggccgcg aacgtctcct cgtatcccgt
     1081 cccgtacagt tcgttgtaga ccatcttgtc ggcgtaggag ctgttgctct gcaggccgat
     1141 ctcgtacgtg ccgatcatcc acttcttcgc ccgctcgaac tcctcccggg tcacgccatc
     1201 cttcttcacc ccggcgatct cggaaagggt gtcggcgatc gcgacgtcca gcttatccgc
     1261 gctcgtcccc atgtagaagg cgaagaatcc cggatccacc tgctccgagg aaaacgaggt
     1321 gaccgagtag gccagcgact tcctgtccct caggttcacg aagagccggc ctcccatccc
     1381 ggcaagcgcc gagcccagga cgtcgagcgc gtaccggtcc ggatcggtga accgcgcacc
     1441 cggatagccg atgacgaagt gcgcctgctg cttgtcgcgc cgctcttcca ccttcaccgc
     1501 cgcatcgtgc gaggggaccg gcaacgcccc cagcgccgca taccccggcc gctgcggcat
     1561 ctccccgaac gccctgcgca ccgccgcgat cgcttccccg gcgtcgatgt cccccgagat
     1621 ggcgatcacc a
//
LOCUS       DATGYW010000342         1634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_299169, whole genome shotgun sequence.
ACCESSION   DATGYW010000342 DATGYW010000000
VERSION     DATGYW010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1634
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299169"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..534)
                     /gene="nrdR"
                     /locus_tag="VK429_04770"
     CDS             complement(58..534)
                     /gene="nrdR"
                     /locus_tag="VK429_04770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020875972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HLN91152.1"
                     /translation="MKCPRCGHVDNKVVDSRAGKDGDVIRRRRECLSCGRRFTTYERI
                     EEELPLVVKRDGRREPYDRQKILSGIRKACEKRPVSADTIEHLVEALEQEFQSGAEKE
                     ISSIRIGERVMSKLLQVDDVAYVRFASVYRQFKDVSQFVEEIKTLISEPAPRTTKS"
     gene            complement(531..1010)
                     /locus_tag="VK429_04775"
     CDS             complement(531..1010)
                     /locus_tag="VK429_04775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013163504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine/deoxycytidylate deaminase family
                     protein"
                     /protein_id="HLN91153.1"
                     /translation="MTPLPTAARTRPDWDTYFMDMAKLAGRRSSCLRRAVGAVLVKDR
                     RLLATGYNGVPSGVTHCEVVGCLRERLKVPSGERHELCRGLHAEQNAIIQAAYHGVSI
                     RDAVLYCTNLPCIICAKMLINAGVHRIVYLEGYSDTLTREMLDEVGMELLKLTAPSP"
     gene            complement(1007..>1634)
                     /locus_tag="VK429_04780"
     CDS             complement(1007..>1634)
                     /locus_tag="VK429_04780"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015721353.1"
                     /note="catalyzes the reaction of glycine with
                     5,10-methylenetetrahydrofolate to form L-serine and
                     tetrahydrofolate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HLN91154.1"
                     /translation="PVPHCEFVTTTTHKTLRGPRSGLIMCRQEFAKKLDSAIFPGSQG
                     GPLMHVIAAKAVALKEAMTPAFKEYQAQILLNATAMAKTLLARGYRLVSGGTDTHLML
                     VNLKDTPLTGKEGEAALEHVGITVNKNTVPFETRSPFITSGIRIGTPAVTTRGMKEKE
                     MERIGNLIADVLAAPSDASVQRRVEAEVRNLCDAFPLYASRLEAYAKV"
BASE COUNT          241 a          543 c          545 g          305 t
ORIGIN      
        1 gggcaagtcg caacgcccgc cgcatgaacc cggtgacggg gaactcggga cggcctgtca
       61 tgacttcgtc gttcgggggg cgggctcgga gatgagggtc ttgatctcct cgacgaactg
      121 gctcacgtcc ttgaactgcc ggtacaccga ggcgaaccgg acgtacgcca cgtcgtccac
      181 ctggaggagc ttcgacatca cccgctcgcc gatacggatc gaggagatct ccttctcggc
      241 gccggactgg aattcctgct cgagggcttc cacgaggtgt tcgatggtgt ctgcgcttac
      301 gggccgcttt tcgcacgcct tgcggatgcc ggagaggatc ttctggcggt cgtacggctc
      361 gcgtcgcccg tcccgcttca cgacgagggg aagctcctcc tcgatccgct cataggtggt
      421 gaaccgtcgc ccgcaggaga ggcattccct cctgcgtcgt atgacgtcgc cgtccttgcc
      481 cgcccgggaa tcgaccacct tgttgtccac gtggccgcac cgggggcact tcatggggag
      541 ggagccgtga gcttcaggag ctccatcccg acctcgtcga gcatctcccg cgtcagggtg
      601 tcgctgtacc cttcgaggta gacgatccgg tggacgccgg cgttgatcag catcttcgcg
      661 cagatgatgc agggaaggtt cgtgcagtac aggacggcgt cccggatcga gacgccgtgg
      721 tacgcggcct ggatgatcgc gttctgctcg gcgtgcaggc cccggcacaa ttcgtggcgt
      781 tcgcccgagg gcaccttgag ccgctcccgg aggcacccca cgacttcgca gtgcgtgacc
      841 ccggagggaa ccccgttgta ccccgtagca aggagtcgcc ggtccttcac caggaccgcg
      901 ccgaccgccc gacgcaggca cgacgaacgc ctgccggcga gcttcgccat gtccatgaag
      961 taggtgtccc agtcgggacg ggtccgcgcc gccgtcggca acggtgtcac actttcgcgt
     1021 acgcctcgag gcgcgaggcg tagagaggga aggcgtcgca caggttcctg acctccgcct
     1081 ccacccgccg ctgcacggag gcgtccgagg gcgcggccag cacgtcggcg atcaggttgc
     1141 cgatccgttc catctctttt tccttcatcc cccgggttgt gaccgcgggc gtgccgatgc
     1201 ggatcccgct cgtgatgaac gggctccgcg tctcgaaggg gaccgtgttc ttgttgaccg
     1261 tgatccccac gtgctccagc gccgcttccc cttccttccc cgtgagcggg gtgtccttca
     1321 ggttgaccag catcaggtgg gtgtccgtgc ccccggagac gagccggtat ccgcgtgcga
     1381 ggagagtctt cgccatcgcg gtggcgttga gcaggatctg cgcctggtac tccttgaagg
     1441 cgggggtcat cgcctccttc agcgcgacgg ccttcgccgc gatcacgtgc atcagggggc
     1501 cgccctggct ccccgggaag atggcggaat cgagcttctt cgcgaactcc tgccggcaca
     1561 tgatcagccc ggagcggggg ccgcgcagcg tcttgtgcgt cgtggtcgtg acgaattcgc
     1621 agtgcggaac cggg
//
LOCUS       DATGYW010000343         1771 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_179142, whole genome shotgun sequence.
ACCESSION   DATGYW010000343 DATGYW010000000
VERSION     DATGYW010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179142"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..341
                     /locus_tag="VK429_04785"
     CDS             <1..341
                     /locus_tag="VK429_04785"
                     /inference="COORDINATES: protein motif:HMM:NF014171.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TrkA C-terminal domain-containing protein"
                     /protein_id="HLN91155.1"
                     /translation="GEEYLKHGIQTVTPVTWGIHRMADLLCYSHLDTVISLGSGEVDI
                     VETEVPPLLVGRTVRELRVPGEIRVIAITREGRTFLPTDGTLFCKEDRLHIALLGASS
                     DRLRTLLGHG"
     gene            394..783
                     /locus_tag="VK429_04790"
     CDS             394..783
                     /locus_tag="VK429_04790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HLN91156.1"
                     /translation="MEETRYRRGLEAVRNLDEENAARLEEALKEIAPDLYRYIVEFAF
                     GDILSRPGLPVATREIVTLSALSAMGTAQPQLRVHLNAALNVGVSRAQIVELFMQIAV
                     YAGIPAALNALYLAKEVFAERDAKGLS"
     gene            889..>1771
                     /locus_tag="VK429_04795"
     CDS             889..>1771
                     /locus_tag="VK429_04795"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HLN91157.1"
                     /translation="MRKTISIPLLAALLLGVAGTPSFAFNQPPLNLGLTDILDGALPG
                     PGTYFTEYIQAYQSGKFKDPDGNSIPGDPNVANVLSMNQFVHVYNHKILGGHLGADVL
                     LPVVAISGSGTVGSPGPPVSTNPAVLGDLVVGPFLQWFDTKLLGRPFFQRVELDFILP
                     TGQYDNKYLINPGSNLWSIEPYYAFTWFLTPEFSTSWRIHYTYNTKNDDPFVALGAND
                     LQPGQAFHFNYSFEYEIFKNFRGAIAGYYLKQLTDDEVNGNSVSGSKEQVFAVGPAVS
                     WAASPNFFLGLKTQWESS"
BASE COUNT          311 a          602 c          538 g          320 t
ORIGIN      
        1 agggggagga gtacctgaag cacgggatcc agaccgtcac cccggtcaca tgggggatcc
       61 accggatggc cgacctcctc tgctattccc acctcgacac ggtgatctcc ctcgggagcg
      121 gggaggtgga catcgtggaa acggaagtcc ccccgctgct cgtcggaagg accgtccggg
      181 aactgcgggt cccgggagag atccgcgtca tcgcgatcac gcgggagggg cgaaccttcc
      241 tcccgaccga cggcaccctg ttctgcaagg aggatcgcct gcatatcgcc ctgctcggag
      301 cctcctcgga tcgtctccgg acgctccttg gccacgggtg aaggtgatac actctcccct
      361 cggatcgcac agcgcgggag cggagggagg accatggagg aaacccggta tcggcggggc
      421 cttgaggcgg ttcggaatct cgacgaggaa aacgcggcgc ggctcgagga ggcgctgaag
      481 gaaatcgccc ccgacctgta ccgttacatc gtcgagttcg ccttcgggga catcctttca
      541 cgaccgggcc tgccggtcgc cacgcgggag atcgtcaccc tctcggcgct gtcggcgatg
      601 gggaccgccc agccgcagct gcgcgtccac ctcaacgccg ccctgaacgt cggcgtgtcc
      661 cgggcacaga tcgtggaact gttcatgcag atcgcggtct atgcggggat ccccgcggcg
      721 ctcaacgccc tctacctggc gaaggaggtc ttcgcggaac gggatgcgaa agggctttcc
      781 tgaccggtcg ctccgcagga agcggttgac ggccctgccg cgttgcgggt atgtatgttg
      841 agtccgattc agggatccgg taccaattca tcctttcgga ggaaaccgat gcgcaagacg
      901 atctccattc cgctcctggc ggctctgctg ctcggtgtcg ccggcacccc gtcgttcgcg
      961 ttcaaccagc cgccgctgaa cctcggcctg accgacatcc tggacggcgc tctcccgggc
     1021 cccgggacct acttcaccga gtacatccag gcgtaccagt ccggcaaatt caaggaccct
     1081 gacggaaact ccatccccgg ggacccgaac gtcgccaacg tgctttcgat gaaccagttc
     1141 gtccatgtct acaaccacaa gatcctgggg gggcacctcg gcgcggacgt cctcctgccg
     1201 gtggtggcga tcagcggctc cggaaccgtc ggctccccgg gcccgccggt gtcgaccaac
     1261 cccgcggtcc tcggcgatct ggtcgtcggc cccttcctcc agtggttcga cacgaagctc
     1321 ctcggccgcc cctttttcca gagggtggag ctggacttca tcctgccgac cggacagtac
     1381 gacaacaagt acctgatcaa cccgggctcc aacctctggt ccatcgaacc gtattacgcc
     1441 ttcacctggt tcctcactcc ggagttctcc acctcctggc ggatccacta cacctacaac
     1501 acgaagaacg acgatccctt cgtcgctctg ggggcgaacg acctccagcc ggggcaggcg
     1561 ttccacttca actactcgtt cgagtacgaa atcttcaaga atttccgggg cgcgatcgcg
     1621 gggtactatc ttaagcagct tacggacgac gaggtgaacg ggaactcggt ttctggctcg
     1681 aaggagcagg tcttcgcggt cggtccggcg gtctcctggg ccgcatcccc gaacttcttc
     1741 ctgggcctca agacccagtg ggagtcctcc a
//
LOCUS       DATGYW010000344         1935 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_299381, whole genome shotgun sequence.
ACCESSION   DATGYW010000344 DATGYW010000000
VERSION     DATGYW010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299381"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..159
                     /gene="ilvN"
                     /locus_tag="VK429_04800"
     CDS             1..159
                     /gene="ilvN"
                     /locus_tag="VK429_04800"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HLN91158.1"
                     /translation="MFRARIVDVALRCYTIEMTGGEGKVQAFLQMLRPLGIREIVRTG
                     KIAISRGM"
     gene            182..1234
                     /gene="ilvC"
                     /locus_tag="VK429_04805"
     CDS             182..1234
                     /gene="ilvC"
                     /locus_tag="VK429_04805"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004512105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HLN91159.1"
                     /translation="MPKNEETEEGQMVTMYREQDAKVELLKGKTIAILGYGSQGHAHA
                     NNLKESGFKVIVGEIPGGGNEKKAKDAGFEVTDAASVVKKANVVVMLLPDELQGGIYR
                     ESVAPNLRKGAYLMFAHGFNIHFGQIVPRPDVNVFMVAPKGPGHLVRAQYLKGEGVPA
                     LIAVHQDPAGNAKDVALAYAAGIGAARAGVIETSFREETETDLFGEQAVLCGGATALV
                     LAGYETLVEAGYAPEMAYFECLHELKLIVDLIYEGGISNMRYSISNTAQYGDLTRGPR
                     VVSPETKAEMKRILEEIQSGSFAKEWMLENQANRPVFNALTRRGEEHPIEEVGRRLRA
                     LMPWMSKGRLVDKTKN"
     gene            1231..1884
                     /locus_tag="VK429_04810"
     CDS             1231..1884
                     /locus_tag="VK429_04810"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013742967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase family protein"
                     /protein_id="HLN91160.1"
                     /translation="MSGKKGPMLAPEGWPFVLGGAAFAIFAYLLWPRGIPLAVLGLLL
                     SLFSLWFFRNPDRTPPSGAGVVVSPADGKIVYAGESAPGRYASVAGKRVSVFMSPFDV
                     HVNRAPVTGRVTSIRYNKGAFHVASVDKASLMNEQNGVAILTPGGATVTYVQIAGMLA
                     RRIVCDLKEGDSVRQGQRVGMIRFGSRVDLYLPAEVRLSVAPGDHVRAGESVIGVFP"
BASE COUNT          333 a          580 c          722 g          300 t
ORIGIN      
        1 atcttccgcg cccggatcgt cgacgtcgcg ctgcgctgct acacgatcga gatgacgggg
       61 ggcgagggga aggtgcaggc cttcctgcag atgctccggc ccctgggcat ccgcgagatc
      121 gtgcggaccg gcaagatcgc catttcccgc gggatgtagg ggccgcggga ggcccgcggg
      181 aataccgaag aacgaagaaa cggaggaagg gcaaatggtc accatgtacc gggaacagga
      241 cgccaaggtg gaactgctca aggggaagac gatcgcgatc ctggggtacg gcagccaggg
      301 gcacgcccac gcgaacaacc tgaaggagag cggattcaaa gtcatcgtcg gggaaatccc
      361 cggcggcggg aacgagaaga aggcgaagga cgccggtttc gaggtgacgg acgccgcctc
      421 ggtggtgaag aaggcgaacg tggtcgtcat gctccttccc gacgagctcc agggagggat
      481 ctaccgcgag tcggtggcgc cgaacctgcg caaaggggcg tacctgatgt tcgcgcacgg
      541 cttcaacatc cacttcgggc agatcgtgcc gcgccccgac gtcaacgtct tcatggtcgc
      601 ccccaagggg ccgggtcacc tcgtccgcgc ccagtacctg aagggggaag gggtgccggc
      661 gctgatcgcc gtccaccagg accctgcggg gaacgcgaag gacgtggcac tcgcctacgc
      721 ggcggggatc ggcgccgcgc gcgccggggt gatcgagacg tccttccggg aggagaccga
      781 aaccgacctc ttcggggaac aggcggtcct gtgcggcggg gcgacggcgc tggtgctcgc
      841 ggggtatgaa acgctggtcg aggccgggta cgcgccggag atggcgtact tcgagtgcct
      901 gcacgagctg aagctgatcg tcgacctcat ctacgagggc gggatctcca acatgcgcta
      961 ttcgatcagc aacacggcgc agtacggcga tctgacgcgc ggcccccgcg tcgtctcccc
     1021 cgagacgaag gcggagatga agcggatcct cgaggagatc cagagcggat ccttcgcgaa
     1081 ggagtggatg ctggagaacc aggccaatcg cccggtcttc aacgccctca cgcgccgcgg
     1141 cgaagagcac ccgatcgagg aggtcggccg caggcttcgg gcgttgatgc cgtggatgtc
     1201 gaaggggcgc ctggtcgaca agacgaagaa ttgagcggga agaaggggcc gatgctcgcg
     1261 ccggagggat ggcccttcgt cctcggggga gcggcgttcg cgatcttcgc gtacctcctt
     1321 tggccgaggg ggatccctct tgccgtgctc gggctccttc tgtccctgtt ttcgctctgg
     1381 ttcttccgca acccggaccg gacgccgcct tccggtgcgg gggtcgttgt ttccccggcc
     1441 gatggtaaaa tcgtctacgc gggggagtcc gcgccggggc ggtacgcttc ggtggccgga
     1501 aagagggtca gcgtcttcat gtcccccttc gacgtccacg tcaaccgggc gccggtgacg
     1561 gggcgggtga cgtcgatccg ttacaacaag ggtgcgttcc acgtggcgag cgtcgacaag
     1621 gcgtcgctca tgaacgagca gaacggcgtg gcgatcctca cgcccggggg ggccacggtg
     1681 acgtacgtcc agatcgcggg gatgcttgcc cgccggatcg tgtgcgacct caaggagggg
     1741 gattcggtgc gtcagggaca gcgggtgggg atgatccgtt tcggctcccg ggtcgacctg
     1801 tacctcccgg cggaggtgcg gctgtcggtc gcccccggag accatgtccg ggccggcgag
     1861 agcgtgatcg gggtcttccc gtgaggcgcg ggaggtggcg cgagagggac ggcctccggc
     1921 ggggggtgta cgtcc
//
LOCUS       DATGYW010000345         1622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_179218, whole genome shotgun sequence.
ACCESSION   DATGYW010000345 DATGYW010000000
VERSION     DATGYW010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179218"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..1033)
                     /locus_tag="VK429_04815"
     CDS             complement(89..1033)
                     /locus_tag="VK429_04815"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020142110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008234 - cysteine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HLN91161.1"
                     /translation="MKKALLVGINRYPDPGNELEGCVNDVRQMAETLKTRYGFSADGN
                     LRLLTDARATTKAILDGLAWLAAGASPGDSLVFHYSGHGSQVPDRNGDETTDRLDEIL
                     CPYDLDWDHPLTDDDLAAACARIPQGALLTVILDCCHSGTGLRDFALSGNLQYLPGLT
                     RPANLIHSGATIPRGDFVRPCGIPPSDAPDRRRFLPHPDSPHIDPERPRRPVRRFGVS
                     VTRTNAVLIAACRDDQTSADAWIEGGYHGAHTFYLCRALATGALDLSYRALVSATGTA
                     LSRAGFAQVPQLEGPAGLLARPAFLPLPVVAVKERYAV"
     gene            complement(1272..>1622)
                     /locus_tag="VK429_04820"
     CDS             complement(1272..>1622)
                     /locus_tag="VK429_04820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011418248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HLN91162.1"
                     /translation="WGSGYFKGTPVSREFLYVEDAAEAIALAADRYDGAEPVNVGAGR
                     EVPINDLIAMVCEMTGYRGKVVRDLTKPDGQPRRCLDISRAKEKFGFVARTPFEEGLR
                     RTIAWYEQARRERS"
BASE COUNT          247 a          484 c          646 g          245 t
ORIGIN      
        1 tgtcccatta tatacgactc gaagcacacg atcttcccgt tcggcgatcg gatccaattc
       61 atggagcagg tccggttggg actctccatc agacggcgta cctctccttg acggcgacga
      121 cggggagggg aaggaatgcc ggacgggcga gcagtccggc gggcccttcg agttgcggga
      181 cctgggcgaa accggcgcgg gagagggcgg tcccggtggc ggagacgagg gcgcggtagc
      241 tgagatcgag ggccccggtg gccagagcgc ggcagaggta gaacgtgtgg gcaccgtggt
      301 agccgccttc gatccaggcg tcggccgacg tctggtcgtc ccggcaggcg gcgatcagca
      361 ccgcgttggt gcgggtgacg ctcacgccga accggcggac ggggcggcgg gggcgctccg
      421 gatcgatatg cggcgagtcc ggatgcggga ggaagcggcg ccggtcgggg gcgtcggacg
      481 gggggatgcc gcaggggcgg acgaaatccc cgcgggggat cgtcgcgccg gagtggatga
      541 ggttcgcggg ccgcgtgagg ccgggcagat actggaggtt gccggagagg gcgaagtcgc
      601 gcaggccggt gccggagtgg cagcagtcga ggatgacggt gaggagggcc ccctgcggga
      661 tgcgcgcgca ggcggcggcg aggtcgtcgt cggtgagcgg gtgatcccag tcgaggtcgt
      721 acgggcagag gatctcgtcg aggcggtcgg tcgtctcgtc gccgttcctg tcgggcacct
      781 gggaaccgtg ccccgagtag tggaagacga gggagtcgcc cggggaggcc cccgcggcga
      841 gccaggcgag cccgtcgagg atcgccttcg tggtggcgcg ggcgtcggtg aggaggcgca
      901 ggttcccgtc ggcggaaaag ccgtaccggg ttttcagcgt ctccgccatc tggcggacgt
      961 cattgacgca cccctccagt tcgttgcccg gatccgggta ccggttgatg ccgaccagca
     1021 gcgctttctt catcgtcgct ccctccttgg gccgcagcgc ggcttgtttc ggagaggtgg
     1081 gagcaaaggg cgggccgtcg gctcgcgagg gaggcgcggg cggtgcggca gcgcggtgag
     1141 acaggaaaac gaccgtattg gaaggagttg ctggaggaat cccggacaga ataggcccgc
     1201 ggggaccgga ggggggtcgc ggcgacggac cggttatcga accttgtgta cgggaagcgg
     1261 tcgggaagaa ctcaggatcg ttcccgtcgc gcctgctcgt accacgcgat cgtcctgcgc
     1321 aggccttcct cgaacggcgt gcgggcgacg aagccgaact tctccttcgc gcgggagatg
     1381 tccaggcacc ggcggggctg gccgtcgggc ttcgtgaggt cgcggaccac cttcccccgg
     1441 tagccggtca tctcgcagac catggcgatc aggtcgttga tcggcacctc gcggcccgcg
     1501 ccgacgttca ccggctccgc cccgtcgtac cggtcggcag ccagggcaat cgcctcggcg
     1561 gcgtcctcca cgtaaaggaa ctctcgggag acgggggtgc ccttgaagta gccgctcccc
     1621 ca
//
LOCUS       DATGYW010000346         2075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_23839, whole genome shotgun sequence.
ACCESSION   DATGYW010000346 DATGYW010000000
VERSION     DATGYW010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23839"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..895)
                     /locus_tag="VK429_04825"
     CDS             complement(<1..895)
                     /locus_tag="VK429_04825"
                     /inference="COORDINATES: protein motif:HMM:NF021489.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HLN91163.1"
                     /translation="MSGSPDPILPRKTRGSIACRLSALLPGLLSLLLLLPAPARGEDF
                     TIRSFRSEIEVRVDASLRVVETIAVDFLRPRHGLYRDIPFRTTDDLGKESITPLRVVS
                     VTNPDGGAWRYKVDRSGGFLRVRIGDPGRFVEGRQVYVITYEAENTILFFPDHDELYW
                     NVTGNEWTVEIASASATATVSAGGGPLKIRTRGYTGPRGSREEAYTVTPSVNGATFTS
                     TREFRPGEGMTIVLGWEKGIVHPGSAWKATLFRLNLPENWVFLAPLFSLGYMVARWHR
                     KGKDPSTGDPLVVAYAPPEENG"
     gene            complement(879..1439)
                     /locus_tag="VK429_04830"
     CDS             complement(879..1439)
                     /locus_tag="VK429_04830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013886035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HLN91164.1"
                     /translation="MTPGSIAALALLAGLSIYLAWLYNRLVRLRNLSRSSWSDIDVLL
                     KKRHDLVGNLVETVKEYAAYEKATLLGVAEARSRAMRAAGPGEKGKEEAALGERLASL
                     FALAENYPVLKANEGFLALQKQLAEIENGIEYARRYYNAVVRDYNTATQTFPSNLVAP
                     RFGFQGAEFFQLDSALERERTDVRLS"
     gene            complement(1445..>2075)
                     /locus_tag="VK429_04835"
     CDS             complement(1445..>2075)
                     /locus_tag="VK429_04835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016870417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLN91165.1"
                     /translation="LDDVVRAGKVLYVGISDAPAWVVSRANTLAELNDWSPFAALQIQ
                     YNLADRSPERDLLPMAKALDIAVTPWGVLAGGVLSGKYKTPKDRPTGARYSKDEVWAK
                     AVVTERSVRIAESAAQVAKETGRTASQVALAWVRQQPFGVIVPILGAKTVAQLQDNLG
                     TLDFTLGPEQLAKLDEASKVDLGFPHDFLVQARSYIFGKTFPLIDNHRA"
BASE COUNT          331 a          694 c          701 g          349 t
ORIGIN      
        1 ggccgttctc ctccgggggt gcgtacgcga ccaccagcgg gtcccccgtg gacgggtcct
       61 tccccttccg gtgccagcgc gccaccatgt atccgaggct gaacaggggg gcgaggaaca
      121 cccagttctc cggaaggttg aggcggaaga gggtcgcttt ccacgcggag ccggggtgaa
      181 cgatcccctt ctcccacccg aggacgatcg tcatcccctc gccggggcgg aactcccggg
      241 tggaggtgaa ggtcgcgccg ttgaccgagg gggtgaccgt gtacgcctcc tccctggatc
      301 cccgtgggcc ggtgtagccg cgggtccgga tcttcagggg tcccccaccg gcggacacgg
      361 tcgcggtcgc ggaggcggac gcgatttcca cggtccattc gttccccgtc acgttccagt
      421 agagctcgtc gtggtccggg aagaagagga tcgtgttttc cgcctcgtag gtgatgacgt
      481 agacctgccg cccctcgacg aaccgcccgg gatcgccgat ccgcacccgc aggaatcctc
      541 cgctgcgatc gaccttgtac ctccacgcgc cgccgtcggg gttcgtcacc gagacgaccc
      601 ggaggggggt gatggactcc ttcccgagat cgtcggtggt tcggaacggg atgtcccggt
      661 acaggccgtg ccgcggacgg agaaaatcca ctgcaatcgt ttcgacgacc cggagagagg
      721 cgtcgacgcg gacctcgatc tcgctccgga aggagcggat ggtgaaatcc tccccgcgcg
      781 ccggcgcggg gaggaggaga agaagcgaca ggagaccggg caggagcgcc gacaggcgac
      841 acgcgatgct cccccttgtc ttccggggga ggatcgggtc aggagagccg gacatcggtc
      901 ctctcccgct ccagcgcgga gtcgagctgg aagaactccg ccccctggaa gccgaaccgg
      961 ggagcgacca ggttggaggg aaaggtctgg gtggcggtgt tgtaatcccg gacgacggcg
     1021 ttgtagtacc ggcgcgcgta ctcgatgccg ttctcgatct ccgcgagctg cttctggagc
     1081 gcgaggaagc cttcgttcgc cttgaggacg gggtagtttt ccgccagggc gaacagcgac
     1141 gcgagacgct ccccgagggc ggcctcctcc tttcccttct ccccgggccc ggcggcgcgc
     1201 atcgccctcg agcgtgcctc cgcgaccccg agcaaggtcg ctttctcgta cgcggcatac
     1261 tccttcacgg tctcgaccag gttcccgacg aggtcgtgcc gtttcttgag gaggacgtcg
     1321 atgtccgacc aggaggagcg cgaaaggttc cgcagccgca ccagccggtt gtagagccat
     1381 gccaggtaga tggaaagccc tgcaaggagc gccagtgctg cgatggaacc gggcgtcatc
     1441 cggttcacgc ccggtggttg tcgatcagcg ggaaggtctt cccgaagatg taggaccgcg
     1501 cctgcacgag gaagtcgtgc gggaagccga ggtcgacctt gctcgcctcg tccagcttcg
     1561 cgagttgctc cggcccgagg gtgaagtcca gggtcccgag gttatcctgc agctgcgcaa
     1621 cggtcttcgc cccgaggatc gggacgatca ccccgaacgg ctgctggcgg acccacgcga
     1681 gcgccacttg ggacgcggtg cggccggttt ccttcgcaac ctgcgccgcc gactccgcga
     1741 tccggacgct ccgttccgta acgaccgctt tggcccaaac ctcatccttc gagtaccgcg
     1801 ctccggtcgg ccggtctttc ggggtcttgt acttccccga cagcactcct cccgccagga
     1861 ccccccaggg ggtcacggcg atgtccagcg cctttgccat cggaagcagg tcccgctccg
     1921 gactccggtc cgccagatta tactggatct gcagggcagc gaagggactc cagtcgttca
     1981 gttccgcgag cgtgttcgca cgcgacacga cccacgcggg ggcgtcggag atcccgacgt
     2041 agaggacctt tccggcccgc accacgtcgt ccagg
//
LOCUS       DATGYW010000347         1878 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_498323, whole genome shotgun sequence.
ACCESSION   DATGYW010000347 DATGYW010000000
VERSION     DATGYW010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_498323"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..1221)
                     /gene="prfA"
                     /locus_tag="VK429_04840"
     CDS             complement(154..1221)
                     /gene="prfA"
                     /locus_tag="VK429_04840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005007710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HLN91166.1"
                     /translation="MWDKLETVVARIPELERLLSDPAVTGNPREMQRVGRELADLRPV
                     AAAHARYRKIEQELADNRALQDGETDPAMKAMVREEIDRLTSEKDRLAEEIRALLVPK
                     DPNDEKNILIEIRAGAGGDEASAFAGELFRAYGMYADAKRWKVEILSRSETGLGGTKE
                     VIAMIEGRGAYSRLKYESGVHRVQRVPATEAGGRIHTSTVTVAVMPEAEEVDVQIQPD
                     DLRIDVFRSSGPGGQSVNTTDSAVRITHVPTGLVVQCQDEKSQLKNKSKAMKILRSRL
                     YDAEMAKRQSERADLRRSQVGTGDRSERIRTYNFPQNRVTDHRVGLTLHQLSTVLDGG
                     FDPFIDALTSQAQVEALRKTG"
     gene            complement(1211..>1878)
                     /locus_tag="VK429_04845"
     CDS             complement(1211..>1878)
                     /locus_tag="VK429_04845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004512351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1385 domain-containing protein"
                     /protein_id="HLN91167.1"
                     /translation="AKDTEKGAKPGGLAMAGAMAMALLLGVGLFFLLPLYATHLLAGL
                     VPALRGSIAFNLADGAIRVLVFVLYIVGITRMKDIRRVFEYHGAEHKVINAYEGKADL
                     TPEAVREFPRLHPRCGTSFLLFVMVISILVFSFIPRESSLLTKALLRLPLIPAIAGIS
                     YEVLRLSAKKTRSPWFRVLVAPGLWLQRLTTREPDLPQIEVAIASFRRVSGPPGSEVS
                     LVG"
BASE COUNT          284 a          651 c          627 g          316 t
ORIGIN      
        1 gcatcgcgga cgtcctcgtt catcgacagg aaaattcggc tccgggggat cccggtgacg
       61 gcggagacga ggatctccgc ctcgccgggg gcggcgtccc gcacgcacgc catctcccga
      121 cggcagatcg cgaggagttc ccggaggagc acttcagccg gtcttgcgga gcgcctcgac
      181 ctgggcctgg gacgtcaggg cgtcgatgaa ggggtcgaac ccgccgtcga gcacggtgga
      241 gagctggtgc agcgtcagcc cgacccggtg gtccgtcacg cgattctggg gaaaattgta
      301 ggtgcggatc cgttcgctgc ggtcccccgt ccccacctgg gagcgccgca ggtcggcccg
      361 ctcggactgg cgtttcgcca tctcggcgtc gtagaggcgc gagcggagga tcttcatggc
      421 cttcgacttg ttcttcagct gggacttctc gtcctggcac tggacgacga gccccgtggg
      481 aacgtgcgtg atgcgcaccg ccgagtcggt ggtgttgacg ctctggcccc cggggccgga
      541 ggagcggaac acgtcgatcc ggaggtcgtc cggctggatc tggacgtcca cctcttccgc
      601 ctcgggcatc accgccacgg tcaccgtgga ggtgtggatc cgcccccccg cctccgtcgc
      661 cggcacgcgc tggacccggt ggacgccgct ttcgtacttc aggcggctgt acgccccgcg
      721 cccctcgatc atggcgatca cttccttggt gccccccagc ccggtttcgc tgcgggatag
      781 gatctcgacc ttccagcgct tggcgtcggc gtacatcccg taggcgcgga agagctcccc
      841 ggcgaaggcg gacgcttcgt ctcccccggc gccggcgcgg atctcgatga ggatattctt
      901 ttcgtcgttg ggatccttcg ggacgagcag ggcgcgaatc tcctccgcga gacgatcctt
      961 ttccgaggtc agccgatcga tctcctcgcg gaccatcgct ttcatcgcgg gatcggtctc
     1021 gccgtcctgg agagcccggt tgtcggcgag ctcctgctcg atcttccggt atcgcgcgtg
     1081 ggccgccgcc accgggcgca gatcggcgag ctcccgcccg acccgctgca tctcccgcgg
     1141 gttccccgtg accgccgggt ccgacagaag ccgctccagc tccggtatcc gggccacgac
     1201 cgtttcgagc ttatcccaca agggagacct ccgaccccgg cggccccgat acgcgccgga
     1261 acgacgcgat cgccacctcg atctggggca ggtccggctc ccgggtggta agccgctgca
     1321 gccacagccc cggcgcgaca agcacgcgga accaggggga ccgggtcttt ttcgccgaca
     1381 gccgcagcac ctcgtaggag attccagcga tcgccgggat cagcgggagc cgcaggagcg
     1441 ccttcgtcag cagggagctt tccctcggga tgaaggagaa gacgaggata ctgatcacca
     1501 taacgaacag gaggaaactt gtgccgcacc gggggtgcag gcgggggaac tcccgcaccg
     1561 cctccggcgt gaggtccgcc ttcccctcgt aggcgttgat caccttgtgc tccgcgccgt
     1621 gatactcgaa gacccttcgg atgtccttca tcctcgtgat cccgacgatg tagaggacga
     1681 agaccagcac ccggatcgcc ccgtccgcga ggttgaaggc gatcgatccc cggagggcgg
     1741 ggaccaggcc ggccaggaga tgggtcgcgt acagcgggag caggaagaac aggccgactc
     1801 ccaggagaag cgccatcgcc atggcgcctg ccatggccag cccccccggc ttcgcgcctt
     1861 tctccgtgtc cttcgcgg
//
LOCUS       DATGYW010000348         1846 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_179571, whole genome shotgun sequence.
ACCESSION   DATGYW010000348 DATGYW010000000
VERSION     DATGYW010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179571"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1743
                     /locus_tag="VK429_04850"
     CDS             <1..1743
                     /locus_tag="VK429_04850"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN91168.1"
                     /translation="GGTAGGAVLGICAGFAAWFYTMILPAAVKAGFFDPAILTHGPLG
                     VALLRPTDFLGAGIGDPVGNAVFWCLFLNLIGFVAGSLLVVPRRAKVREDGRQSDAPG
                     IGPRDGAPDVGAHYPSLEDIEAVVTRYAGREKEREVGEVVREIREIKSRGETREAVIR
                     QMELPVRLERILTGSIGAIAARNVLRDMLPIALADAKTLVASFREMEKDLATTRETVS
                     HKEEEILARERLLASVVHSIDDGIVAFDAKGRITAVNEGSCRLFRRVESAMIGGDFQL
                     LIRDTPYREKQRIVARATYRTGHWRGEVDIVRGDGTHAPGLVSTARITDKGGGAAGFV
                     ASFKDLTELKAMQNKMIQSEKLASLGQMAAGVAHEIRTPLGSIKMSTRLLGDGDGGAE
                     SAEVIGTIREAVSSMEVIVNELLEYTREIALHLDEYDLVKITRSAIFGLEDEAGRKGV
                     SVVVSTPPVPCTALVDGIRVKQVLTNVVKNAVEAAPDGVGKVLVTLSERDGGVRITVA
                     DNGPGMTGEELGKVFQPFYTNKAQGVGLGMPIVKRLVELHGGEVRIDSGGGRGTKVFV
                     DLPRYPFAGTGGVQ"
BASE COUNT          293 a          579 c          696 g          278 t
ORIGIN      
        1 ggggggaccg ccggcggcgc ggtcctcggc atctgcgcag ggttcgccgc ctggttctac
       61 accatgatcc tccccgcggc ggtgaaagcc ggttttttcg atccggcgat cctcacgcac
      121 gggcccctcg gcgtagcgct ccttcggccc acggactttc tgggcgccgg gatcggcgac
      181 ccggtcggga acgccgtctt ctggtgtctc ttcctgaacc tgatcgggtt cgtcgccggt
      241 tcccttctcg tcgtgccgcg ccgcgcgaag gttcgggagg atggtcggca atccgacgcc
      301 cccgggatcg gcccgcgcga tggggcgccg gacgtcggcg cgcactaccc gtccctcgag
      361 gacatcgagg cggtggtgac ccggtacgcc ggccgggaga aggagaggga agtcggggag
      421 gtggtccgcg agatccggga gatcaagagc cggggggaga cccgcgaggc ggtcatccgc
      481 cagatggagc tgccggtgcg cctcgagcgg atcctcaccg gctccatcgg ggcgatcgcg
      541 gcgcgcaacg tcctgcggga catgctcccc atcgccctgg ccgacgcgaa gacgctggtc
      601 gcgtcgttcc gggagatgga aaaggacctg gcgaccacgc gcgagacggt ctcccacaag
      661 gaggaggaga tcctcgcccg cgagcggctg ctggcgagcg tcgtgcacag catcgacgac
      721 gggatcgtcg cgttcgacgc gaaggggagg atcaccgcgg tgaacgaggg gtcgtgccgc
      781 ttgtttcgcc gggtggaaag cgccatgatc gggggggatt tccagctgct catccgggac
      841 accccgtacc gggagaagca gcggatcgtc gcgcgggcca cctatcggac cgggcactgg
      901 cgcggcgagg tggacatcgt gcgcggcgac ggcacgcacg ccccggggct cgtctccacc
      961 gcgcggatca ccgacaaggg gggcggcgcg gccggtttcg tcgcctcgtt caaggacctg
     1021 accgagctga aggcgatgca gaacaagatg atccagagcg agaagctggc ctccctcggg
     1081 cagatggcgg ccggggtcgc ccacgagatc cgcaccccgc tggggtcgat caagatgagc
     1141 acgcggctgc tcggggacgg ggacggcggc gccgagtcgg cggaggtgat cggcacgatc
     1201 cgggaggcgg tctcctcgat ggaggtgatc gtcaacgagc tgctcgaata cacccgcgag
     1261 atcgcgctgc acctggatga atacgacctc gtcaagatca cccgctcggc gatcttcggg
     1321 ctggaggatg aggccggacg gaagggcgtc tccgtcgtcg tctcgacgcc cccggtcccg
     1381 tgcacggccc tggtcgacgg gatccgtgtg aagcaggtgc tgacgaacgt cgtgaaaaac
     1441 gcggtcgaag cggccccgga cggggtcgga aaggtgctcg tcacgctttc ggagcgggac
     1501 ggcggcgtcc ggatcaccgt ggcggacaac ggccccggga tgaccggcga ggagctgggg
     1561 aaagtcttcc agccgttcta cacgaacaag gcgcaggggg tggggctggg gatgccgatc
     1621 gtgaagcgcc tggtggaact gcacggcggc gaggtgcgga tcgactccgg gggcggccgg
     1681 gggacgaagg tcttcgtgga cctgccgcgg tatccgttcg ccgggacggg gggtgtccaa
     1741 tgaagcggaa aatcctcctg gtggacgacg aggagatctt cctccgccct ctctcgcgca
     1801 cgatcgtcgc cgctgggttt ctcgtggata cggcgttcac tgccac
//
LOCUS       DATGYW010000349         3722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_406029, whole genome shotgun sequence.
ACCESSION   DATGYW010000349 DATGYW010000000
VERSION     DATGYW010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3722
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406029"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3664)
                     /gene="rpoC"
                     /locus_tag="VK429_04855"
     CDS             complement(<1..3664)
                     /gene="rpoC"
                     /locus_tag="VK429_04855"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012526294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HLN91169.1"
                     /translation="MEDLFTRVEKPKDPVHFSGIRISIASPEQIRKWSHGEVKKPETL
                     NYRTFKPERDGLFCAKIFGPIKDYECNCGKYKRMKHRGIVCEKCGVEVIQSKVRRERM
                     GHIELASPVAHIWFLKSLPSRIATILDMPMKDVEAVIYFEKYIVLDPWETDTQLQEVL
                     TEGKYREKIEEYRELFKGDKEKQDLLRERFRVGMGAEAIRTLLAGLDLAKLSESLRKE
                     MADTASEAKKKKISKRLKIVEAFRDSEQKPEWMVQQGIPVLPPDLRPLVPLDGGRFAT
                     SDLNDLYRRVINRNNRLKRLLDLSAPEIIIRNEKRMLQEAVDALFDNGRRGKLITGSN
                     KRPLKSLSDMLKGKGGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFK
                     PFIFNKLEEGGFATTIKQAKKMVEKEKREVWDALDEVIRQLPVMLNRAPTLHRLGVQA
                     FEPVLIEGKAIQLHPLVCFAFNADFDGDQMAVHVPLSIEAQMEARVLMMSTNNILSPA
                     HGKPVIGPSQDIVLGIYYLTRQRDGQTGEGKKFSAPDEVRIAYDGGAVGLQAAIRVRI
                     EGKMVDTTVGRVLLYEVVPKEVPFEYVNKVMKKKDLAELIDVTYRNCGQKATVLLADH
                     LKNTGFQFATISGISICIDDMVIPSSKKAILDRASVSLEKVINEHVEGLITPGERYNK
                     VVDIWSAATEKVAKEMIKEMGTETVKGKDGKEKKVISFNPIYMMADSGARGSDKQMMQ
                     LAGMRGLMAKPSGEIIETPIRSNFREGLSVGEYFISTHGARKGLADTALKTANSGYLT
                     RRLVDVAQDCIVVEEDCQTLDGIGVRALIEGGEIIDRLSDRILGRAALEDLYDQEGKL
                     LVAANQEITEEVARQIEMSGLDEVKIRSALTCESKRGVCALCYGRDLARGKMVAIGEA
                     VGIISAQSIGEPGTQLTMRTFHIGGIATAGSIAQSSHQSKQAGRIKFQGIVAVENREK
                     HLVAMNRNGYLVLLDENHREREKYQIPYGAVLMVADGDKVKDGTRLAEWDPYNIPILT
                     EVDGEIKFGDIIENVTMREQVDEVTGRSTRVIIESKDPEVRPRISLKEVGGRTTRKLP
                     GTSSEARYLLPSGSNILVDEGQKVQAGDIIAKIPRETTKTKDITGGLPRVAELFEARK
                     PKEYALISEIDGIVQMGKDFKGKRKIQVVPEVGVPREYTIPRGKHITVHDGERIRAGE
                     ALMDGSPNPHDILRVLG"
BASE COUNT          559 a         1245 c         1121 g          797 t
ORIGIN      
        1 ccccgaggac ccgaagaatg tcgtgaggat tcggcgatcc gtccatgagg gcctcgcccg
       61 cccggatccg ctccccgtcg tggacggtga tgtgcttgcc tcgggggatc gtgtattccc
      121 ggggaacgcc gacttccggc accacctgga ttttgcgctt ccctttgaaa tccttcccca
      181 tctgcacgat gccgtcgatc tcggagatga gcgcgtactc cttcggcttg cgcgcctcga
      241 acaactccgc gacgcgggga agaccgccgg tgatgtcctt ggtctttgtc gtctcgcgcg
      301 ggatcttcgc gatgatgtcg cccgcctgga ccttctgtcc ctcgtcgacc aggatgttgg
      361 acccgctggg aagcagatac cgggcctcgc tcgaggtgcc ggggagcttc cgtgtcgttc
      421 ggccgcccac ttccttgagg gagatgcgag gacggacctc cggatccttg gactcgatga
      481 tgacgcgcgt ggagcgtccc gtcacctcgt cgacctgctc gcgcatcgtt acgttctcga
      541 tgatgtcccc gaacttgatc tctccgtcga cctcggtgag gatcgggatg ttgtacggat
      601 cccattccgc gagccgggtc ccgtccttca ccttgtcgcc gtccgcgacc atgaggaccg
      661 ccccgtacgg gatctggtac ttctcccgct cgcggtggtt ctcgtcgagc aggaccagat
      721 agccgttccg gttcatcgcg accaggtgct tttcgcggtt ctccacggcc acgatcccct
      781 ggaacttgat gcgccccgcc tgcttggact gatgggaact ctgcgcgatc gacccggccg
      841 tcgcgatgcc gccgatgtgg aacgtccgca tcgtcaactg cgttccgggc tccccgatgg
      901 actgcgcgga gatgatcccc acagcctctc cgatcgcgac catcttcccg cgcgccaggt
      961 cgcgtccgta acagagggcg cacacccccc gcttgctctc gcaggtgagg gcggagcgga
     1021 tcttgacctc gtccagcccg gacatctcga tctgccgggc gacctcctcg gtgatctcct
     1081 ggttcgcggc gacgagaagc tttccctcct ggtcgtacag atcctcgagg gccgcgcggc
     1141 ccaggatccg gtccgacagg cggtcgatga tctcccctcc ctcgatcagg gccctcaccc
     1201 cgatcccgtc gagggtctgg caatcctcct cgacaacgat gcagtcctgc gccacgtcga
     1261 ccaggcgtcg ggtcagatac ccggagttcg cggtcttgag cgcggtgtcc gccaacccct
     1321 tccgcgcgcc gtgggtcgag atgaagtatt cacccacgga gagtccctcg cggaagttcg
     1381 accggatcgg cgtctcgatg atctcgccgg acggtttggc catcaggccg cgcattccgg
     1441 ccaactgcat catctgcttg tcggaacccc tggcgcccga gtcggccatc atatagatcg
     1501 ggttgaagct gatgaccttt ttctccttgc cgtccttccc cttgacggtc tcggtcccca
     1561 tctccttgat catttccttg gcgacctttt ccgtcgccgc cgaccagatg tcgacgacct
     1621 tgttgtaccg ctcgcccggg gtgatcagcc cctcgacgtg ctcgttgatc accttttcga
     1681 ggctgaccga cgcgcgatcg aggatcgcct tcttgctgga cgggatgacc atgtcgtcga
     1741 tgcagatcga gataccggag atcgtcgcga actggaaccc cgtgttcttc agatggtccg
     1801 ccaggaggac cgtggccttc tggccgcagt tccggtacgt gacgtcgatc agttcggcga
     1861 ggtccttctt cttcatcacc ttgttgacgt actcgaaggg gacctctttc gggacgacct
     1921 cgtagagcag cacgcgcccg acggtcgtgt cgaccatctt gccttcgatt cgcacgcgga
     1981 tcgccgcctg gagtccgact gcgccgccgt cgtaggcgat ccgcacctcg tcgggggcgg
     2041 agaacttctt cccctccccc gtctgtccgt cgcgctgccg cgtgaggtag tagatcccca
     2101 gcacgatgtc ctgggagggc ccgatgacgg gcttcccatg ggccggggag aggatgttgt
     2161 tggtcgacat catgaggaca cgtgcctcca tctgcgcctc gatggagagc ggaacgtgga
     2221 ccgccatctg gtccccgtcg aagtcggcgt tgaaggcgaa gcagaccagc ggatgcagct
     2281 ggatcgcctt cccctcgatc agcaccggct cgaaggcctg cacgccgaga cggtggagcg
     2341 tcggcgcccg gttcagcatg acgggaagct gtcggatgac ctcgtcgagc gcgtcccaga
     2401 cctcccgctt ctccttctcc accatcttct tcgcctgctt gatggtggtc gcgaacccgc
     2461 cctcctcgag cttgttgaag atgaacggct tgaacagctc gagcgccatc ttcttcggaa
     2521 gaccgcactg gtgaagcttc agctccggtc cgacgacgat cacggagcgg cccgaatagt
     2581 cgacgcgctt cccgaggagg ttctggcgga accggccgcc ctttcccttc aacatgtcgg
     2641 acagcgactt gagggggcgc ttgttcgatc ccgtgatgag cttccccctg cggccgttgt
     2701 cgaacagggc gtccacggcc tcctgcagca tccgcttctc gttccggatg atgatctcgg
     2761 gagcggacag gtcgaggagg cgcttcagcc ggttgttccg gttgatgacg cgccggtaca
     2821 ggtcgttcag gtccgaggtg gcgaatcggc cgccatccag cgggaccagg ggacgaaggt
     2881 ccggcggcag aacgggtatg ccctgctgga ccatccactc gggcttctgc tcgctgtccc
     2941 ggaacgcctc gacgatcttc agccgcttgg agatcttctt cttcttcgcc tcggacgcgg
     3001 tgtcggccat ctccttgcgc agcgactcgg agagcttcgc aaggtccagc ccggccagca
     3061 gggtccggat cgcctccgcg cccattccca cgcggaaccg ctcacggagc aggtcctgct
     3121 tctccttgtc ccccttgaag agctcgcggt actcctcgat cttttcccgg tacttcccct
     3181 cggtgaggac ctcctgcagc tgcgtgtcgg tctcccatgg atcgaggacg atgtacttct
     3241 cgaagtagat gaccgcctcg acgtccttca tcggcatgtc gaggatcgtg gcgatccgcg
     3301 acgggaggct tttcaggaac cagatgtgcg cgaccgggga ggccagctcg atgtggccca
     3361 tccgctctcg gcggaccttc gactggatga cctcgacgcc gcacttctcg cagacgatcc
     3421 cccggtgctt catccgcttg tacttgccgc agttgcactc atagtccttg atgggaccga
     3481 agatcttcgc gcagaacagg ccgtcgcgct cgggcttgaa ggtccggtag ttcagcgtct
     3541 ccggcttctt cacttccccg tgcgaccatt tgcggatctg ctcgggggat gcgatcgaga
     3601 tccggatccc cgaaaaatgg acgggatcct tcggtttttc tacgcgggtg aaaaggtctt
     3661 ccacgggtgc ctcccggtta cgtttccgat acggttacct gccggttact gctggggctc
     3721 ct
//
LOCUS       DATGYW010000350         1915 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_299803, whole genome shotgun sequence.
ACCESSION   DATGYW010000350 DATGYW010000000
VERSION     DATGYW010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1915
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299803"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..335
                     /locus_tag="VK429_04860"
     CDS             <1..335
                     /locus_tag="VK429_04860"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HLN91170.1"
                     /translation="RCPLLLVHCVESAGAAAMGGEITDTESRKDLDRLRRYTLVLGKH
                     DIQAEAELGFGAPVRVLPEIIQRHGVELLVVGSHGHKGISDWLYGSTIDELRHRLNIS
                     VLVAGREE"
     gene            481..762
                     /locus_tag="VK429_04865"
     CDS             481..762
                     /locus_tag="VK429_04865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91171.1"
                     /translation="MKSKSVLYALAVIVLTGGMAVAAFAEAPVASLSADPEQGLSPWG
                     AGEIREPVETGAVPDRVEGSSDLFKQATGEEPAVEIGGQMYRPGVDTGP"
     gene            904..>1915
                     /locus_tag="VK429_04870"
     CDS             904..>1915
                     /locus_tag="VK429_04870"
                     /inference="COORDINATES: protein motif:HMM:NF024762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HLN91172.1"
                     /translation="MNRRSVAAILFVILGSCVFGVFADAGTTPVPSPAVATESSYLSA
                     ILQYSARGSRDLFGLPVDPSMVHREIQRLEDRLRPELLRATDEGQVVDAFRRVLLEEE
                     GFAYDRSASDPRNYLLETVLARKKGNCLGLSMLYLALADRLGVPFRGVYVPSHCFVRY
                     EGNGVRVNVEFAEGGASWADDRYRREFRIPPSRPYLHSLAQNEMLGVFLKTLGAAYSR
                     NGREEDALLLYDEARRLYPGLPDAHYNAGVSLQKLGRLDEAAGKYRRALDLDPEMAAA
                     RDNLSILLAGKGRYEEAIAEARRAVELEPWNAASRGNLAAAYCGCGRLDEGIREYRMA
                     VEI"
BASE COUNT          311 a          598 c          685 g          321 t
ORIGIN      
        1 accggtgtcc gctgctgctg gtccactgcg tcgagagcgc gggggccgcc gcgatgggcg
       61 gggagatcac cgacacggag agccggaaag acctcgaccg cctgcggcga tacacgctcg
      121 tgctcggcaa gcacgacatc caggcggagg ccgagctcgg gttcggcgcc cctgtccgcg
      181 tcctcccgga gatcatccag cggcacggcg tggagttgct cgtcgtcggg tcccacggcc
      241 acaaggggat ctccgactgg ctgtacgggt cgacgatcga cgagctgcgg caccgcctta
      301 acatctcggt cctcgtggcc ggccgggaag agtaagcacc ccggaaaaat cgcctccccc
      361 ctcgaatccc gggaaaatgt tcccggcagg caacccccgg cgccctccgc ccatctcatt
      421 ttcaatagtg ggaagagtct tcaggcatgc aaccgacgga ccgcaaggga gggcaagggg
      481 atgaaaagca aaagcgtact ttacgcgctg gcagtcattg tattgacggg aggtatggcg
      541 gtcgccgcgt tcgcggaagc gccggtggcg tcgctctccg cggacccgga gcagggtctt
      601 tcaccatggg gcgcgggaga gatccgcgag ccggttgaga ccggggcggt cccggatcgg
      661 gtggagggtt cgtccgatct gttcaagcag gctacgggcg aggagccggc ggtggagatc
      721 gggggacaga tgtaccgccc gggcgtcgat accggtccgt aacctgacga caaacggcag
      781 aattgctcca tcaacggcgg cgccgggatg cgatttgcac cccggcgccg ttttctttaa
      841 ggtataattt aaagattgaa cgctccgggg cggcgccccg gggaggtgga ggggggcagg
      901 caggtgaatc gtcgatccgt cgcggcaatc ctctttgtga tcctggggtc gtgcgtcttc
      961 ggtgtgttcg ccgacgccgg gacgacgccg gttccttcgc ccgccgtcgc gacggaatct
     1021 tcctatctgt ccgccattct tcagtattcc gccaggggga gcagggacct gttcggtctc
     1081 ccggtggacc cctcgatggt gcatcgcgag atccagcggt tggaggaccg cctccgtccc
     1141 gagctgctcc gcgccaccga tgaagggcag gtcgtcgacg ccttccggcg cgtcctcctg
     1201 gaggaggaag ggttcgccta cgacagatcg gcgtcggacc cgcggaatta tctcctcgaa
     1261 accgtccttg cccggaaaaa ggggaactgc ctcgggttgt cgatgctcta cctcgctctc
     1321 gccgatcggc tcggcgtccc gttccgcggg gtgtacgtcc cgtcccactg tttcgtccgg
     1381 tacgagggga acggcgtccg cgtgaacgtg gaattcgcgg agggcggcgc ctcttgggcg
     1441 gacgaccggt accggcggga gttccggatc cccccgtcca ggccgtacct ccattcgctt
     1501 gcccaaaacg agatgctcgg cgtgttcctg aagacgctgg gggcggcgta ctcccgcaac
     1561 gggcgggagg aggatgctct cctgctgtac gacgaggcgc ggcgcctcta tccggggttg
     1621 cccgacgcgc attacaacgc cggcgtctcc ctgcagaagc tggggcgtct ggacgaggcg
     1681 gccgggaagt atcgcagggc gttggacctt gacccggaga tggcggccgc ccgggacaac
     1741 ctgagcatcc tgctggcggg gaaggggcgg tacgaggagg cgatcgccga ggcgcgccgg
     1801 gccgtggagc tcgaaccgtg gaacgccgcg tcgcggggga acctcgccgc cgcctactgc
     1861 ggctgcgggc ggctggacga agggatccgc gagtaccgga tggcggtgga gatcg
//
LOCUS       DATGYW010000351         2090 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_24090, whole genome shotgun sequence.
ACCESSION   DATGYW010000351 DATGYW010000000
VERSION     DATGYW010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24090"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..781
                     /gene="recO"
                     /locus_tag="VK429_04875"
     CDS             <1..781
                     /gene="recO"
                     /locus_tag="VK429_04875"
                     /inference="COORDINATES: protein motif:HMM:TIGR00613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HLN91173.1"
                     /translation="AVRGTGAGPEVHLRPVIRPSFHSSPAFLARAIDLGEADRRLTFF
                     TRDAGVLVTVGKSAWRSRKRFGGTLQRYVLLDIAWTEHPGRMAVLSSASVNRSFWGIV
                     EEWERVRHADHLLEIASELFPQGGPKPRAFEVLLRGMRSIAEGEPPAETARKAEAEFL
                     AIGGWGPDLAGCRKCKGKEARSYRFLASEGGVLCEACPPAGGFPLSLGAVKTWRALQG
                     GETAGRGRLRIPVVIAEELRAVIPGYVEYCLGKQLRSLNEK"
     gene            881..1759
                     /locus_tag="VK429_04880"
     CDS             881..1759
                     /locus_tag="VK429_04880"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013505998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HLN91174.1"
                     /translation="MFFQDLILSLQKFWADKGCVIHQPYDIEVGAGTFHPATFLQALG
                     PEPWNTAYVEPSRRPTDGRYGENPNRLQHYYQFQVIMKPCPTDYVELYLDSLRAVGID
                     PLKHDIRFVEDDWESPTLGAWGLGWEVWLDGMEITQFTYFQQCGGIDLKPISGEITYG
                     VERIAMYLQNVDNVFDLKWVGDVTYGDVHHRGEVEWSKYNFEAADIPMLFTLFTMYEK
                     ECLGLIERKLVLPAYDYCLKCSHAFNMLDARGAISVTERTSYIGRVRSLARFCAEGFL
                     RSREEMGFPLLGKFSA"
     gene            1802..>2090
                     /locus_tag="VK429_04885"
     CDS             1802..>2090
                     /locus_tag="VK429_04885"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF014183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HLN91175.1"
                     /translation="MERDYLLEIGCEEIPAGFVGPALWFGGQQFEGMLKKARLSFHKV
                     DIYGTPRRLTYVIRGLEDRQAASKETVMGPPKSVGLDAAGKPTKAALGFARS"
BASE COUNT          372 a          646 c          688 g          384 t
ORIGIN      
        1 cgccgttcgg ggaacggggg caggtccgga agttcacctt cggccagtga tccgtccttc
       61 cttccactcc tctcccgcgt tcctcgcgcg cgccatcgac ctcggggagg ccgatcgccg
      121 cctgacgttc ttcacccggg acgccggggt tcttgtgacc gtcgggaaat ccgcgtggcg
      181 cagccggaag cggttcggcg gcaccctgca gcggtacgtc cttcttgaca tcgcctggac
      241 ggaacatccg gggcgaatgg ccgtcctttc ctccgcctcc gtaaaccgaa gtttttgggg
      301 gattgtggag gagtgggagc gggtgcgaca cgcggaccac ctgctcgaga tcgcgtcgga
      361 gcttttccca cagggggggc ccaagccccg ggcgttcgag gtcctcctgc gggggatgcg
      421 ttccatcgcg gaaggggagc cgccggcgga gaccgcccga aaggccgagg ctgaattcct
      481 cgcgatcggc gggtggggtc ccgacctggc cgggtgccgt aaatgcaagg gaaaggaggc
      541 ccgttcgtac cggtttctcg catccgaggg cggggtcctg tgcgaggcct gtccgcccgc
      601 cgggggattc cccctctctc tcggcgccgt aaagacgtgg cgcgccctgc agggggggga
      661 gaccgccgga cgaggtcgac tccggatacc cgtcgtgatt gccgaggaat tacgagctgt
      721 tatcccagga tatgtcgagt attgcctcgg caaacaactc cggagtctga acgagaagtg
      781 acctctgagt gatataaccc ctcaattttc caatgatttg gcttgacaac ccgtcccgcg
      841 gagtgataac tatccctatc acttccaccg ggagggaacg gtgtttttcc aagatctgat
      901 tctgtccctg cagaaattct gggccgacaa gggctgcgtg atccaccagc cgtacgacat
      961 cgaagtcggc gccgggacgt tccatcccgc cacgttttta caagcccttg gacccgagcc
     1021 gtggaacacg gcctatgtgg aaccgtcccg ccgtccgacg gacgggcgat acggcgagaa
     1081 tcccaaccgt ctgcagcact actaccagtt ccaggtcatc atgaagcctt gccccacgga
     1141 ttatgtggag ctgtacctcg actccctccg cgcggtgggg atcgatccgc tgaagcacga
     1201 catccggttc gtggaggacg actgggagtc ccccaccctc ggggcgtggg ggctggggtg
     1261 ggaggtgtgg ctcgacggga tggagatcac ccagttcacc tacttccagc agtgcggcgg
     1321 catcgacctg aagccgatct caggcgagat cacctatggt gtcgagcgga tcgcgatgta
     1381 cctgcagaac gtggacaacg tcttcgacct caagtgggtc ggggacgtca cgtacgggga
     1441 tgtacaccac cgcggcgagg tcgagtggtc caaatacaac ttcgaggccg ccgacatccc
     1501 gatgctcttc accctgttca ccatgtacga gaaggagtgc ctgggcctca tcgagcggaa
     1561 gctcgtcctg cccgcgtacg attactgcct gaagtgttcc cacgccttca acatgctcga
     1621 cgcccggggg gcgatctccg tcacggagcg cacctcctac atcggccggg tccggagcct
     1681 tgcgcgattc tgcgcggagg ggttcctccg gtcgcgcgag gagatgggct tcccgctgct
     1741 cgggaagttc tccgcctgag tctagggaca cggtaagaaa ccacccgcga agagggatcc
     1801 gatggaacgt gactatctgc tcgagatcgg ctgcgaggaa atcccggcgg gattcgtcgg
     1861 ccccgcgctc tggttcggag gccagcagtt cgaggggatg ctgaagaagg cccgtctctc
     1921 ctttcataag gtcgacattt acggtacccc gcggcggctg acgtacgtga tccggggcct
     1981 cgaggaccga caggcggcgt cgaaagagac cgtgatggga ccgccgaaaa gcgtgggact
     2041 ggacgcggcc gggaagccga cgaaggcggc cctggggttc gccaggtcac
//
LOCUS       DATGYW010000352         3325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_179673, whole genome shotgun sequence.
ACCESSION   DATGYW010000352 DATGYW010000000
VERSION     DATGYW010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3325)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3325
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_179673"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1407)
                     /locus_tag="VK429_04890"
     CDS             complement(<1..1407)
                     /locus_tag="VK429_04890"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HLN91176.1"
                     /translation="MTWRKTIIIALLLGLVSTAATAAPPKEAPAVPSPSVPTVKAPSK
                     PAPAPVVLEGKTLLYFREPALGSSPEERARNVAGRLGKLVENRAFRPDSIKVVDDDFA
                     SLVVAEGKVLLGVSDRDAAAEGATRQVLAERYAGAIRAAIEAHNVAFSFRSLLFGVLY
                     AVVATAVLLVILFGYRYLFSRLYTRLRALRETRIRSVRIQSFEILHADRIVWLLVTLA
                     RWFRILTTALLVYIWMLFVLSLFPWTRGITVGIIGYILDPLRDFAAAVLAFLPNLFFL
                     IVIAFITRFVIKFTRFFFDEVEKGKVVLPGFYADWAGPTYKIVRFFILAFALTVAFPY
                     IPGSKSEAFKGVSIFLGVLFSLGSTSTISNVMAGLSITYMRAFKVGDRIRIGDTVGDV
                     IDQTLLVTHLRTIKNEDVTVPNAMVLNAHIVNYSARAREDGLILHTAVTIGYDAPWRT
                     VHELLIEAARKTPCILVEP"
     gene            1557..3065
                     /locus_tag="VK429_04895"
     CDS             1557..3065
                     /locus_tag="VK429_04895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012355174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase F"
                     /protein_id="HLN91177.1"
                     /translation="MKKLITPARLTFAVVASLVLAAGAWAETPAKPPPAPVAKPAARQ
                     LTTQVKTWTGDFDVMLERRAIRVLAPYSRTLYFNDKGRERGLTADSVRGFEQWINKKY
                     KKQLGKRPITVLIIPTTRDRLLPAVVQGNGDIAVGNLTITEERRKIVDFVSLPDQTSV
                     KEVVVTGPKSPAIATADDLAGKTVHVRKASSYYESLVALNGRFAKEGKPAMKLVLVPD
                     ALEDEDMMEMLNAGLLTAIVVDDWKAKTWAQILPKIKVNEQAVVRAGGQIGWATRKGS
                     PKLEAEILAYMKASLTKGVITGRVKQYMRKVKQIKDSSGKDELKRFEQTYALFEKYGK
                     KYNFDPLMLAAQGYQESQLNQGAKSQVGAIGVMQVMPATGKELNVGDIKVVEPNIHAG
                     VKYMDQIMTKNFPDAKFDEVNRTLFAFASYNAGPGNISKMRKEAEKSGYDPDKWFNNV
                     EIVTAKKIGIETTTYVRNIYKYYVAYKLMAERQEAAQKAREQVAPGPAQPAK"
     gene            complement(3111..>3325)
                     /locus_tag="VK429_04900"
     CDS             complement(3111..>3325)
                     /locus_tag="VK429_04900"
                     /inference="COORDINATES: protein motif:HMM:NF024579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLN91178.1"
                     /translation="GDTAKAVPVLRKIVDRNSPFSPAYVMLGTIYEKQGKAGEAKKVY
                     RKAADNAELPEPDRAQFRNKLQSMGK"
BASE COUNT          729 a          997 c         1089 g          510 t
ORIGIN      
        1 cggctccaca aggatgcacg gggtcttccg cgccgcctcg atcaggagct catggaccgt
       61 cctccagggg gcgtcgtacc cgatggtgac cgcggtatgg aggatgagac catcctccct
      121 cgcgcgggcg ctgtagttca cgatgtgggc gttcagcacc atcgcgttgg ggacggtgac
      181 gtcctcgttc ttgatggtcc ggaggtgggt caccaggagc gtctggtcga tcacgtcccc
      241 gacggtgtcg ccgatccgga tccggtcccc gaccttgaag gcgcgcatgt aggtgatgct
      301 caagcctgcc atcacgttcg agatcgtcga ggtggagccg agggagaaca ggaccccgag
      361 gaagatggaa acgcccttga acgcctcgga cttggagccg gggatgtacg ggaaggcgac
      421 ggtcaacgcg aacgcgagga tgaagaagcg gacgatcttg taggtgggcc ccgcccagtc
      481 ggcgtagaaa ccggggagga cgaccttccc cttctccacc tcgtcgaaga agaaccgcgt
      541 gaacttgatg acgaaccgcg taatgaaagc gatgacgatc aggaagaaga ggttcggcag
      601 gaaggccagg acggctgccg caaagtcccg gagcgggtcg aggatgtagc cgatgatccc
      661 cacggtgatc ccgcgcgtcc aggggaagag gctcaggaca aagagcatcc agatgtagac
      721 cagcagggcc gtcgtgagga tccggaacca ccgtgccaga gtgacgagaa gccacacgat
      781 ccggtcggcg tgcaggatct cgaacgactg gatccgcacg gaacggatcc tcgtctccct
      841 caacgcccgg agccgggtat agagccggga gaacaggtat cgatacccga acaggataac
      901 gagaagcacg gcggtcgcca cgaccgcgta gaggacgccg aacaggaggc tccggaagct
      961 gaacgccacg ttgtgcgcct cgatcgccgc gcggatcgcc ccggcataac gctccgcaag
     1021 gacttggcgc gtcgccccct ccgcggcggc gtcccggtcg gacactccga gcagtacctt
     1081 cccctccgcg acgaccaggg aggcgaagtc atcgtcgacc accttgatcg aatccgggcg
     1141 gaacgcccgg ttctccacca gtttcccgag gcgtccagcg acgttccggg cccgttcctc
     1201 gggggaggac cccaaggcag gctcccggaa gtagaggagg gtctttcctt ccaggacgac
     1261 cggggcgggc gccggcttcg agggtgcctt cactgtgggg acggaaggcg agggaaccgc
     1321 gggagcctcc ttcggcgggg ccgcggtcgc cgcggtggaa accagtccga gcagcaacgc
     1381 gatgatgatg gtcttgcgcc aagtcaccgg ttcacctcca tgccactcgc ggggcctttc
     1441 cctactggca ttgaatagtt gcctaatagt accccaaatc agcagggggt tgtatccaac
     1501 cagaaagcat cgtaatttaa gcagatcgaa ccgatccatg ggggaggaaa cacctgatga
     1561 agaaactgat tacccccgca aggctgacgt tcgccgttgt cgcctcgctg gtccttgccg
     1621 ccggcgcatg ggccgagacg ccggcaaaac ccccgcctgc tccggttgca aaaccggcgg
     1681 cacgtcagct taccacccag gttaagacgt ggaccggcga cttcgacgtg atgctcgagc
     1741 gccgggcaat ccgggtgttg gcgccctaca gccggaccct gtacttcaac gacaaggggc
     1801 gcgagcgcgg cctcaccgcc gacagcgtgc gcggattcga gcagtggatc aacaagaagt
     1861 acaagaaaca gctcggcaaa cggccaatca ccgtgttgat cattcccacg acccgggaca
     1921 ggctgctccc ggcggtcgta caggggaacg gcgacatcgc ggtcgggaac ctcaccatca
     1981 ccgaagaacg gcggaagatc gtggacttcg tctcgctccc ggatcagaca tcggtgaaag
     2041 aagtggtcgt aaccgggccg aaatccccgg cgatcgcaac ggcggacgac ctggccggca
     2101 agacggtcca cgtgcgcaag gcgtcaagct attacgagag cctcgtggcg ctgaacgggc
     2161 ggttcgcgaa agaggggaaa cccgcgatga agctcgtcct cgtgcccgac gctctggagg
     2221 acgaggacat gatggagatg ctcaacgccg gtctccttac ggcgatcgtc gtcgacgact
     2281 ggaaggcgaa gacgtgggcg cagatccttc cgaagatcaa ggtgaatgag caggcggtcg
     2341 tgagggcagg cgggcagatc ggatgggcga cccgcaaggg cagcccgaag ctggaggcgg
     2401 agatcctcgc ttacatgaaa gccagtctca ccaagggggt gataaccggg cgcgtaaagc
     2461 agtacatgcg gaaggtcaag cagatcaagg actccagcgg aaaggacgag ttgaagcggt
     2521 tcgagcagac gtacgcactg ttcgagaagt acgggaagaa gtacaacttc gacccgctta
     2581 tgcttgccgc ccaggggtac caggagtcgc agctgaacca gggtgcgaag agccaggtgg
     2641 gggccatcgg ggtgatgcag gtcatgccgg ccaccggcaa ggaactgaat gtgggcgaca
     2701 tcaaggtcgt cgagcccaac atccacgccg gcgttaaata catggaccag atcatgacga
     2761 agaacttccc cgacgccaaa ttcgacgaag ttaaccgcac actcttcgcc ttcgcaagct
     2821 acaacgccgg cccgggaaac atctcgaaga tgcgcaagga ggccgagaaa agcggatacg
     2881 accccgacaa gtggttcaac aacgtcgaaa tcgtgaccgc gaagaagatc ggcatcgaga
     2941 ccacgacgta cgtccggaac atctacaagt actacgtcgc gtacaagctt atggcggaga
     3001 gacaggaggc ggcgcaaaag gcccgcgagc aggtggcgcc gggcccggca caacccgcca
     3061 agtagacgac ccgggcgggg cgacgaggcg acggaaatcc cgcgggaatt ctatttcccc
     3121 atggactgga gcttgttcct gaattgcgcc cggtcgggct cgggcagctc cgcgttgtcc
     3181 gcggctttcc tgtacacctt cttcgcctct ccggccttcc cctgtttctc gtagatcgtg
     3241 ccgagcatga cgtaggcggg ggagaacggc gaattgcggt ccacgatctt ccgcaggacg
     3301 gggaccgcct ttgccgtgtc cccct
//
LOCUS       DATGYW010000353         1746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_343062, whole genome shotgun sequence.
ACCESSION   DATGYW010000353 DATGYW010000000
VERSION     DATGYW010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_343062"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..390)
                     /locus_tag="VK429_04905"
     CDS             complement(<1..390)
                     /locus_tag="VK429_04905"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HLN91179.1"
                     /translation="MGLKAYLNDIVEAVVTTAKGMRITARYGVDPKEEVTLQYPEERW
                     EIPQGYRGFLHNDIKTCTACTMCVKTCPIDCISLESVRGADKRMVLASYDINIGRCMY
                     CGLCVEVCPPKSLKHTAGYEMASVTRGD"
     gene            complement(395..1510)
                     /gene="nuoH"
                     /locus_tag="VK429_04910"
     CDS             complement(395..1510)
                     /gene="nuoH"
                     /locus_tag="VK429_04910"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011744840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HLN91180.1"
                     /translation="MEALAISLVKAVPMLGGAPLWAVTLLLMVVVAAVILVFALTFEG
                     VGSLVLRKVAGDIQARIGPNRVGPNGILQFLADGVKLVLKEDLIPANADRLLFKLAPY
                     FVFVGSFAAFVVVPFGVGLIAADLNIGIYYVMAVTSLVVVGVLLAGWSSNNKWALLGG
                     MRAAAQIVSYEIPVGMALIPAVLIAGSLSLQDIVRSQGGLLGIFGWNLFHNPFTFFSF
                     FLYFTAAQAETNQTPFDLPEAESELVSGYNVEYSGIRFGFFFLAEFGDMFIVAALATA
                     CFLGGWNVPFFNAGTLPSIWGNLLSLGVFLAKAFTMVLVMMWVRWTLPRLRVDQLMRM
                     SWKYLVPLTFVNLLGVSLWLLLFKGKGIPGMIASLFG"
     gene            complement(1510..>1746)
                     /locus_tag="VK429_04915"
     CDS             complement(1510..>1746)
                     /locus_tag="VK429_04915"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012566.4"
                     /note="Catalyzes the transfer of electrons from NADH to
                     quinone; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HLN91181.1"
                     /translation="PRIFKPPVGETYFRSECPRGETGIYLVSDGSVNPFRLKIRTGSF
                     VAMNIFEKVTRGLMIADIVAVIGSFDIILPEIDR"
BASE COUNT          353 a          577 c          555 g          261 t
ORIGIN      
        1 atctccgcgg gtcaccgacg ccatctcgta gccggcggtg tgcttcaggg acttcggggg
       61 gcacacctcg acgcacagcc cgcaatacat gcaccgcccg atgttgatgt cgtaggacgc
      121 aaggaccatc cgcttgtccg ccccccgcac cgactcgagg gagatgcagt cgatggggca
      181 cgtcttcacg cacatggtgc acgcggtgca cgtcttgatg tcgttgtgga ggaatccacg
      241 gtatccctgg gggatttccc accgctcctc ggggtactgc agcgtgacct cctccttcgg
      301 gtccacgccg taccgcgcgg tgatccgcat ccccttcgcc gtggtgacca cggcctccac
      361 gatgtcgttc agatatgcct tcaggcccat ggtctcatcc gaacagcgag gcgatcatcc
      421 ccgggatccc cttgcccttg aagagcagca gccacaggga gacgcccagg aggttcacga
      481 acgtaagagg caccaggtat ttccaggaca tccgcatcag ctggtccacg cgcaggcggg
      541 gcagcgtcca gcggacccac atcatgacca gcaccatcgt gaacgccttc gcgaggaaca
      601 cgccgaggga gagcaggttc ccccagatcg acggcagcgt gccggcattg aagaacggga
      661 cgttccaccc gcccagaaaa caggcggtgg ccagggccgc cacgatgaac atgtcgccga
      721 actccgccag gaagaagaag ccgaatcgga tcccggagta ttccacgttg tagccggaga
      781 ccagctccga ctcggcctcg gggagatcga acggggtctg gttcgtctcg gcctgcgccg
      841 ccgtgaagta gaggaagaag gagaagaagg tgaaggggtt atggaacagg ttccacccga
      901 agatcccgag cagccccccc tgggagcgca cgatgtcctg cagcgacagc gagccggcga
      961 tgagcaccgc ggggataagg gccatcccca ccgggatctc gtaggagacg atctgcgccg
     1021 cggcccgcat gccgccgagt agcgcccact tgttgttgga tgaccacccc gcgagcagga
     1081 cgccgaccac caccagagag gtgaccgcca tcacgtaata aatgccgatg ttcaggtcgg
     1141 cggcgatcag tcccacgccg aaggggacga ccacgaaggc ggcgaaggag ccgacgaaga
     1201 cgaagtacgg cgccagcttg aagaggagcc ggtccgcgtt cgccgggatg aggtcctcct
     1261 tgaggaccag cttcacgccg tcggccagga actggaggat cccgttgggc ccgacgcggt
     1321 tcgggccgat ccgggcctgg atgtcgccgg ccaccttgcg cagcaccagc gaccccaccc
     1381 cttcgaacgt cagggcgaag acgaggatga ccgccgccac caccaccatc agcagcaggg
     1441 tcaccgccca cagcggcgca ccgccgagca tgggcaccgc cttgacgagg gatatcgcca
     1501 gcgcttccac tacctgtcga tctccgggag gatgatgtcg aagctgccga tgacggcgac
     1561 gatgtcggcg atcatcagcc ccctcgttac cttctcgaag atgttcatcg ccacgaagga
     1621 gccggtgcgg atcttcagcc gaaaggggtt caccgagccg tcactgacca ggtagatccc
     1681 cgtctccccg cgcgggcact cggagcggaa gtacgtctcg ccgaccggcg gcttgaagat
     1741 gcgggg
//
LOCUS       DATGYW010000354         1533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_24389, whole genome shotgun sequence.
ACCESSION   DATGYW010000354 DATGYW010000000
VERSION     DATGYW010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24389"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..897
                     /gene="nrfD"
                     /locus_tag="VK429_04920"
     CDS             <1..897
                     /gene="nrfD"
                     /locus_tag="VK429_04920"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HLN91182.1"
                     /translation="LDLGRPWNVINPIIGNAFGLSSVLFLVAWHFLLYMICEFLEFSP
                     VVAQWLHWPKARRILEGLSTGAVILGITLSTLHQSGLGALFLLAPTKVHPLWYSGNIP
                     VLFFVSSIFAGLSMVMIESFFTQKAFKDRIGHDTHAAHDSILLGLGKGALGALFAYIF
                     LKGIDFVHYKQWVHLDTPMGYWYLFEIVGFVFLPTALFFQAIRKRNPRLVQITAFLTA
                     AGVILNRLNISIIGFKWYEAVRYYPSWMEIWITLAVISMELWVFRWVILRMPVFGEAH
                     EVVVEEKTAEDMEVVTWKASVL"
     gene            876..>1533
                     /locus_tag="VK429_04925"
     CDS             876..>1533
                     /locus_tag="VK429_04925"
                     /inference="COORDINATES: protein motif:HMM:NF013743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein H"
                     /protein_id="HLN91183.1"
                     /translation="MEGIRFIDIYAMKGVEYLIVISFFAVFVLFCRYMYRSPEKRAAA
                     RIAPENVTRFRVPEGLFYHQGHGWLRPEPGSIGVVGLDDFAQKLIGKVDAVELPAVGS
                     RLAQGEKAWSLVVDSQRIPMLSPVAGEVVEVNREVLRSPEILRQDPYGKGWLLKVKSS
                     RVASNTRNLLSGKLAKAWMESALDKLHPLHGESLGPVLQDGGVPLEGIARVLGGDEWV
                     D"
BASE COUNT          251 a          493 c          489 g          300 t
ORIGIN      
        1 ctggacctgg gccgtccctg gaacgtcatc aaccccatca tcgggaacgc cttcgggttg
       61 agctccgtgc tcttcctggt ggcctggcac ttcctgctct acatgatctg cgagttcctg
      121 gagttctccc cggtcgtcgc gcagtggctg cactggccga aggcgcgaag gatcctcgag
      181 gggctctcca ccggggccgt catcctgggg atcaccctct cgacgctgca ccagtcggga
      241 ctgggagccc tcttcctgct cgcgccgacg aaggtccacc ccctgtggta ttcggggaac
      301 atccccgtgc tgttcttcgt gtcgagcatc ttcgcggggc tctccatggt catgatcgag
      361 agcttcttca cccagaaggc cttcaaggac cgcatcggac acgacaccca cgcggcccac
      421 gacagcatcc tcctcggact gggcaagggg gccctcggcg ccctcttcgc ctacatcttc
      481 ctcaagggca tcgacttcgt gcattacaag cagtgggtcc acctcgacac cccgatgggg
      541 tactggtacc tgttcgagat cgtcgggttc gtcttcctgc cgaccgccct cttcttccag
      601 gcgatccgga agcgcaaccc caggctcgtg cagatcaccg cgttcctcac cgcggcgggg
      661 gtcatcctca accggctcaa catctccatc atcgggttca agtggtacga agcggtacgg
      721 tactacccct cctggatgga gatctggatc accctcgccg tcatcagcat ggaactctgg
      781 gtcttccggt gggtgatcct gaggatgccc gtgttcggag aggcgcatga agtggtggtg
      841 gaggaaaaaa ccgcggaaga catggaggtg gtcacatgga aggcatccgt tttatagaca
      901 tctatgccat gaagggggtc gagtatctga tcgttatctc gttcttcgcg gtcttcgtgc
      961 tcttctgccg ctacatgtac cggtcccccg agaagcgggc ggccgcgagg atcgcgccgg
     1021 agaacgtcac ccggttccgg gtccccgagg ggctcttcta ccaccagggg cacggctggc
     1081 tccgtccgga gccgggctcc atcggcgtcg tcgggctgga cgacttcgcc cagaagctca
     1141 tcgggaaggt ggacgccgtc gagctgcccg ccgtgggttc ccggctggcg cagggggaaa
     1201 aggcgtggag cctcgtggtc gattcccagc gcatcccgat gctgtcgccg gtggccggcg
     1261 aggtcgtcga ggtaaaccgc gaggttctcc ggtcccccga gatcctgcgc caggatccgt
     1321 atggaaaggg ctggctgttg aaggtgaaat cctccagggt cgcgtcgaac acccggaatc
     1381 tcctctcggg gaagctggcc aaggcctgga tggaaagcgc cctcgacaag ctccatccgc
     1441 tccacgggga aagcctgggg ccggtcctcc aggacggcgg tgtcccgctg gaggggatcg
     1501 cgcgggtcct gggcggcgac gaatgggtgg acc
//
LOCUS       DATGYW010000355         1782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_343153, whole genome shotgun sequence.
ACCESSION   DATGYW010000355 DATGYW010000000
VERSION     DATGYW010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1782
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_343153"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(177..1148)
                     /locus_tag="VK429_04930"
     CDS             complement(177..1148)
                     /locus_tag="VK429_04930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HLN91184.1"
                     /translation="MKRSHAVAGIALLCLVALCIGAGVRSAWSEVKPYPSHQVTYMVC
                     FDPGGQSDREARRQAPLLEKLLGQKVIIDYKIGGGGALGWRALTKAKPDGYTFAGFNI
                     PHVILQPLQQDVGYKTEQIVPVFIFHKTPLALAVLETSPFKTLKDLIDYAKKNPYLVS
                     VGGSGAYTGYHMATLRFEKLIGTRLTYVPYTGAAPQMTSFLGGHVVAVFGASDDLTRF
                     RDKIRVLGFATETRFPGFPDVPTLKEQGFDMVEGVDRGIAVPPNTPANVIKTLEAAFM
                     DIARRPEFQEEQRKGGFIPLAMGHEEVKAYMKKMTALYTELAAGLKK"
     gene            complement(1210..>1782)
                     /locus_tag="VK429_04935"
     CDS             complement(1210..>1782)
                     /locus_tag="VK429_04935"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HLN91185.1"
                     /translation="AAVVKSLASLVGFSRQECVMFEIAAYLHDLGKLAIPSEILEKRD
                     RLTQAEWGVMRTHAYFTYQILNPIEVLNLVSSWSSLHQERLDGSGYPFHVREDDLPLG
                     ARLMAVADVFTAITENRPYRKGMTREEALGALHKMSANRELDAPLISLLETHYDAIAR
                     AREEAQTQAIREYEAFREALKPIAKIREAK"
BASE COUNT          288 a          565 c          588 g          341 t
ORIGIN      
        1 acggcgaggc ccagcccccc ggcgagggtc atgaagccga cgacgtaggg gagggtgcgg
       61 ggcggcagcc gctcctcgac atcaccccgg atctgcgacg ccgcgatgat gacgaccgcc
      121 ccgaggaggg cgatcacccc acccgcgaca atgtcgccct tccgctggct gcgcaactac
      181 tttttcagcc ccgcggcaag ctccgtgtag agggctgtca tcttcttcat gtacgccttc
      241 acctcttcgt gacccatcgc aagcgggatg aagccgccct tgcgctgctc ctcctggaat
      301 tccggtctac gcgcgatgtc catgaaggcc gcctccagcg tcttgatcac gttggccggc
      361 gtgttgggtg ggacggcgat gccgcggtcg accccctcca ccatgtcgaa tccctgctcc
      421 ttcagcgtcg ggacgtcggg gaaaccgggg aaccgcgtct cggtggcgaa cccgaggacg
      481 cggatcttgt cccggaatcg ggtcaggtcg tccgaggcgc cgaagacggc cacgacgtgc
      541 cccccgagga aactcgtcat ctggggagcc gccccggtgt aagggacgta ggtgagcctg
      601 gtgccgatca gcttctcgaa ccggagcgtc gccatgtggt agccggtgta ggcacccgat
      661 cccccgacgg aaacgaggta agggttcttc ttcgcatagt cgatcaggtc ctttaaggtc
      721 ttgaacgggc tggtctcgag caccgctagc gccagggggg tcttgtggaa gatgaagacg
      781 gggacgatct gttccgtctt gtagccgacg tcctgctgca gcggctggag gatcacgtgg
      841 gggatgttga agccggcgaa cgtgtagccg tcgggcttgg cctttgtgag cgccctccat
      901 ccgagcgctc cccctccgcc gatcttatag tcgataatga ccttctggcc gaggagtttt
      961 tcaagcagcg gcgcctgccg gcgcgcctcg cggtccgact gcccgcccgg gtcgaagcag
     1021 accatgtagg tgacctggtg ggaggggtac ggtttcacct cgctccaggc ggaacgaact
     1081 cccgcaccga tgcaaagcgc gaccaggcac agcaaggcga tcccagcgac ggcgtgcgat
     1141 cgtttcatcg tcgtccccct cgtgtttttt aaggccggtt ccaaacggtg tttccacacc
     1201 gccccgattt tactttgcct cccggatctt tgctatcggt ttcagcgctt cccggaacgc
     1261 ttcgtactcc cggattgctt gtgtctgcgc ctcttcgcgg gcgcgggcga tcgcgtcgta
     1321 atgggtctcg agcagggaga tcaggggtgc gtcgagttcc ctgttcgccg acatcttgtg
     1381 gagggcaccc agggcctcct cacgcgtcat ccctttgcga tacggccggt tctcggtgat
     1441 cgcggtgaag acgtccgcca ccgccatgag acgggccccg agcggaaggt cgtcctcgcg
     1501 gacgtggaac gggtagccgc tgccgtcgag gcgctcctgg tggagcgaac tccaggagga
     1561 gacgaggttc aggacctcga tcgggttcag gatctggtat gtgaagtagg cgtgggtccg
     1621 catcacgccc cactcggcct gcgtcaggcg gtcccgcttc tccaggatct cggaggggat
     1681 cgccagcttt cccaggtcgt ggaggtaggc ggcgatctcg aacatcacgc actcctgccg
     1741 ggagaagccg acgagggacg cgagggactt gacgacggcg gc
//
LOCUS       DATGYW010000356         1562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_245296, whole genome shotgun sequence.
ACCESSION   DATGYW010000356 DATGYW010000000
VERSION     DATGYW010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245296"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VK429_04940"
     CDS             <1..430
                     /locus_tag="VK429_04940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91186.1"
                     /translation="GTIRFVFLEFPWCPPCADVWRALRTAAAPFPPGTVRIYRVLFDR
                     ETALSPTGRQEVPPLHPVPLPEGGAPEDTGALKITTLSALPGEFRKEFRVSQVPVLLL
                     LDADGKVERRWIGFSTGMSLELSTEIRNRSQALSPRPPGT"
     gene            complement(384..1517)
                     /gene="rodA"
                     /locus_tag="VK429_04945"
     CDS             complement(384..1517)
                     /gene="rodA"
                     /locus_tag="VK429_04945"
                     /inference="COORDINATES: protein motif:HMM:TIGR02210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HLN91187.1"
                     /translation="MTRTSKWARMDWALLINALALCAIGLLNVYSGTRVHGAPGTALV
                     VKQLVWILIGVAGFFAVFLLSDGSIEETANGFFLAVLLLLVVVLMAGRVRGGAQRWIA
                     IGAFNFQPSEFAKIAVTLVLARYLSSKYRYGGIGLKEFLPGIGLVLVPFLLVALQPDL
                     GSAGVFLFILAGMAVVACVRWKVLAFFAAAGMAVIPSLWFFMKEYQRQRVLTFLNPEL
                     DPLGAGYHVIQSKIAVGSGGILGKGYLQGTQGSLRFLPEQHTDFAFAVFSEEWGFLGS
                     LLLLVLFLMLVYRLFYLTARSQDRFASFACGGIAVFFLTHIVINLAMVCGLFPVVGIP
                     LPFVSYGGSSMLTGMMALGAAANLSRSRFTFQGGGGKGLGIDS"
BASE COUNT          325 a          520 c          497 g          220 t
ORIGIN      
        1 cgggacgatc cgtttcgtct ttctcgaatt cccgtggtgt cccccgtgcg cagacgtctg
       61 gagggccctg cggaccgcag cggcgccgtt tcctcccggg accgtgcgaa tctatcgggt
      121 cctgttcgac cgagaaacgg ctctgtctcc cactgggcgg caggaggtcc ccccattgca
      181 ccccgttcct cttcctgaag gcggcgcccc ggaggatacc ggggcgctga agataacgac
      241 cctctccgcg cttcccggcg agttccgcaa ggagttccgc gtgagccaag tgcccgtgtt
      301 gctccttctc gacgccgatg gaaaggtgga gaggcggtgg atcgggttct cgaccggaat
      361 gtcgctggaa ctctccacgg agatcaggaa tcgatcccaa gccctttccc cccgcccccc
      421 tggaacgtga accgggagcg ggacaggttc gccgccgcgc ccagcgccat catcccggtc
      481 agcatcgacg acccgccgta gctcacgaac ggaagcggga tcccgacgac gggaaaaaga
      541 ccgcacacca tcgcaaggtt gatgacgatg tgggtcagga agaagaccgc gatccccccg
      601 caggcgaacg atgcgaaccg atcctgcgac cgggcggtga ggtagaagag acggtagacc
      661 agcatcagaa acagtacgag caggagaagg gacccgagga acccccactc ctcggagaag
      721 acggcaaatg cgaaatcggt gtgctgctcc ggcaggaaac gaagcgatcc ctgggtcccc
      781 tgcaggtatc ccttcccgag gatcccgccg gaccccaccg cgattttcga ctggatcacg
      841 tgataccccg cccccagagg gtcaagctcg gggttcagga aggtgagcac ccgctgccgc
      901 tggtactcct tcatgaagaa ccagagggag ggaatcacgg ccatgccggc cgccgcgaaa
      961 aaagcgagca ccttccaccg cacgcacgcc accaccgcca tccccgcgag aatgaagaga
     1021 aacacccccg cgcttcccag gtcgggctgg agcgccacga ggaggaatgg aacgaggacg
     1081 agtccgatcc cggggaggaa ctccttcagc ccgatcccgc cgtaccggta cttcgacgag
     1141 aggtaccggg ccagaacaag cgtgaccgcg atcttcgcga actccgacgg ctggaaattg
     1201 aacgcgccga tggcgatcca ccgctgggcg cccccccgga ccctgcccgc catcaacacc
     1261 accacgagga gaaggagaac ggcgaggaaa aagccgttcg cggtctcttc gatggagccg
     1321 tcgctgagga ggaagacggc gaagaatccg gcgaccccga tgaggatcca gacgagctgc
     1381 ttgaccacga gggcggtccc gggagcgccg tggacccgcg tgcccgagta gacgttcagc
     1441 agcccgatcg cgcagagggc cagcgcgttg atcagcagcg cccagtccat ccgcgcccat
     1501 ttcgacgtac gggtcacgtg ccctcctttc gcggcggggg aacggggcgg gtgcggaaga
     1561 at
//
LOCUS       DATGYW010000357         2545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_499085, whole genome shotgun sequence.
ACCESSION   DATGYW010000357 DATGYW010000000
VERSION     DATGYW010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_499085"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VK429_04950"
     CDS             <1..468
                     /locus_tag="VK429_04950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HLN91188.1"
                     /translation="MVTKWMVNRAFPRDTLTAIDKAIKASETTHRGEIRFVVEGALET
                     APLLRGQTARERAIDVFSQLRIWDTERNNGVLIYLLLSDRDVEIVADRGVDAKVGPQE
                     WERICREMEAAFRRADFEGGVIGGIREVTRHLAEHFPPIGTDRNELPDKPVVL"
     gene            515..1051
                     /gene="hpt"
                     /locus_tag="VK429_04955"
     CDS             515..1051
                     /gene="hpt"
                     /locus_tag="VK429_04955"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012033692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HLN91189.1"
                     /translation="MTREEPKVFITEEAIRRRVVELGRRISGEYARVENLHLVGVLRG
                     SFIFLADLSRALTIPRSVDFLAVAAHEGAGTRKGPVRLITDLRTDIAGKHVLVVEDIV
                     DTGVTLDYLMSLLALRAPASLKCCALLSKPACRKKEVRIDYLGFEIPDVWVVGYGLDD
                     RERDRALPYIGVRSSSGS"
     gene            1098..2159
                     /locus_tag="VK429_04960"
     CDS             1098..2159
                     /locus_tag="VK429_04960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013988489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase family protein"
                     /protein_id="HLN91190.1"
                     /translation="MKAELPAIGKVSSEIFDEVILPQLGRKRPEILMGPRHGVDVGVV
                     DLGHGQVMVTTTDPIFVVPPYGWERSGWFAVHILASDAVTSGIRPNYITMDLNLPLSI
                     TRDEFEALWTVMHRECDKIGMAVISGHTGRYEGCEYPMIGGATVIGIGPRDRYVTPDM
                     ARFGDIVILTKGAAIEAAGLFAVTFPGRVAERYGEKAAREAEEIFWQMSIVEDAFAAV
                     EAGVRENGVTAMHDATECGVWGGLFEVARASGVGMTIDKEKIIVQEAVRNVCDLFGID
                     PYTSISEGTLILTCRPHKAKEVIRRLGDKGIPASMVGEIVDPRQGMRFFENGTSHELI
                     HPKVDPFWAAFGKAASQGG"
     gene            2166..>2545
                     /locus_tag="VK429_04965"
     CDS             2166..>2545
                     /locus_tag="VK429_04965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013274869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HLN91191.1"
                     /translation="MSDRSSPGQWRLYVITDEKASRGRSHLQVAEAAILGGADVLQLR
                     DKEASSGRLYRVAMQLRKLTRDANIPFIVNDRLDIALAADADGVHVGQADLPASVVRV
                     IMGPGRILGVSVDTVEEALLAEKDG"
BASE COUNT          461 a          727 c          917 g          440 t
ORIGIN      
        1 atggttacca agtggatggt gaaccgcgct tttccacggg acacgttgac cgcgatcgac
       61 aaggcgatca aggcgagcga gaccacgcac cgcggcgaaa tccgcttcgt ggtggaaggc
      121 gcgctggaaa ccgcgccgct cctgcgaggg cagaccgcga gggagcgcgc gatcgacgtc
      181 ttttcgcaac tgcggatctg ggataccgag cggaacaacg gcgtactgat ttacctgctc
      241 ctgtcggacc gggacgtgga gatcgtcgcc gaccgggggg tcgacgcaaa ggtgggtcca
      301 caggaatggg agaggatctg ccgcgagatg gaggccgcgt ttcgacgggc ggatttcgaa
      361 ggaggggtga tcggcggcat ccgggaggtg acgcggcatc tggcggaaca ttttcccccg
      421 atcggaaccg accggaatga attgccggac aaaccggtgg tgctgtagcg gtgggtctgg
      481 gcgggtcgca ggatgatcag cgatcggggc cggcgtgacc cgggaggagc cgaaggtctt
      541 catcaccgag gaggcgatcc ggcgacgcgt cgtggaactg gggcgacgga tctcgggaga
      601 gtatgcccgg gttgaaaatc tgcacctggt cggtgtgctt cgcgggagct tcatctttct
      661 ggcggacctc tcacgggcgt tgacgatccc caggagcgtc gacttcctcg ccgtggccgc
      721 ccacgagggc gccgggacgc ggaaaggccc tgtgcgcctg atcacggatc tgcggaccga
      781 catcgcgggg aagcacgtat tggtcgtcga ggacatcgtc gacaccggtg ttacgctcga
      841 ctaccttatg tcgctgcttg cgctgcgcgc gccggcctcc ctgaaatgtt gcgcgctgct
      901 cagcaagccg gcctgccgga aaaaggaagt gagaatcgat tacctggggt tcgagattcc
      961 cgacgtgtgg gtggtcgggt acgggctgga tgacagggaa cgcgatcggg ccctgccgta
     1021 catcggggtc cggtcctcca gcggatcatg acgatagtgg taaaattcca acacacaaat
     1081 cggtacggga ggaattcgtg aaagcggagt tgccggcgat cggaaaggtg tcttcggaaa
     1141 tattcgatga ggtcatcctc ccccagcttg gccgaaagcg cccggaaatc ctcatgggcc
     1201 cgcgtcatgg ggtggatgtc ggggtcgtcg atctggggca cgggcaggtg atggtgacga
     1261 cgaccgatcc catcttcgtc gtgcctccct acgggtggga gcgttccggc tggttcgcgg
     1321 tccacatcct ggcgtccgac gcggtcacct cggggatccg gccgaactac atcaccatgg
     1381 acctgaacct ccccctctcc atcacgcggg atgagttcga ggcgttgtgg acggtgatgc
     1441 accgggagtg cgacaagatc gggatggccg tcatctccgg gcacaccggc cgctacgaag
     1501 gttgcgaata tccaatgatc ggcggggcca ccgtgatcgg catcggacca agggaccggt
     1561 atgtcacccc cgacatggcg cggttcgggg atatcgtcat cctcaccaag ggggcggcca
     1621 tcgaagcggc cggcctgttc gccgtcacct ttcccgggcg cgtggcggaa cggtacgggg
     1681 agaaggcggc acgggaggcc gaggagatct tctggcagat gtccatcgtc gaggacgcct
     1741 tcgccgcggt ggaggccggc gtgagggaaa acggggtgac cgccatgcac gacgcgaccg
     1801 agtgcggggt gtggggtggc ctcttcgagg tcgcccgtgc gtcgggcgtc ggcatgacga
     1861 tcgacaagga gaagatcatc gtgcaagagg cggttcggaa cgtttgcgac ctgttcggca
     1921 tcgacccgta tacgtcgatc agcgagggga cgctgatcct cacctgccgg ccgcacaagg
     1981 cgaaggaagt gatccggcgg ctgggcgaca aggggatccc ggcgagcatg gtgggggaga
     2041 tcgtggatcc gcggcaggga atgcgtttct tcgaaaacgg aacgtcgcat gaactgatcc
     2101 accccaaggt ggaccccttc tgggccgcct tcgggaaagc ggcgtcgcag ggcggctgac
     2161 cggcgatgtc cgatcgttcc tctcccggcc agtggcgtct ctacgtcatc accgacgaga
     2221 aggcgagccg gggcaggtcg catcttcagg tcgccgaagc ggcgattctc ggcggagccg
     2281 acgttcttca gctgcgggat aaggaagcct ccagcggccg gctctatcgg gtggcgatgc
     2341 agttgcggaa gctcacccgc gatgcgaata tccccttcat cgtgaacgac cgcctcgaca
     2401 tcgccctggc cgccgacgcg gacggggttc atgtcggcca ggccgacctc cctgcgtccg
     2461 tggtgcgggt aatcatgggc ccgggcagga tcctgggggt ttcggtggat acggtggagg
     2521 aggccctcct ggcggagaag gatgg
//
LOCUS       DATGYW010000358         1829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_129238, whole genome shotgun sequence.
ACCESSION   DATGYW010000358 DATGYW010000000
VERSION     DATGYW010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129238"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1324)
                     /locus_tag="VK429_04970"
     CDS             complement(<1..1324)
                     /locus_tag="VK429_04970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLN91192.1"
                     /translation="MTTGEKILHGGGYLIDDPTAGTVFTPEEFSDEQIQLADTTDQFL
                     REKVLPHVEKLENHDFDLMVKLLRQFGELGLLMIDAPEEYGGLDLPKTTSMLAAEKAS
                     IYGGFSVAYTAHSGIGTLPLVYYGTKEQKERYLGKIITGEWMAAYCLTEPDSGSDALG
                     AKATATLTPDGKHYLLNGTKQFTTNGSFADLYTVFAKIDRQHFTAFLVERTFEGVKPG
                     PEEKKLGIRGSSTTSLILEDAKVPVENVLGEIGKGHKIAFNVLNVGRLKLGACVTGAG
                     KFAFAEGVRYANLRKQFGVTIGTFGAIREKIADTAAALFASEALVYRVAGMIDDRLAA
                     VPKGIPDYYEAYQQGIEDYSIECAVAKVFCSDVLALVVDETVQIFGGYGYTQEYPAER
                     FYRDERINRIFEGTNEINRMLIPGTMLKRAMKGQFPLLELARSVERDLS"
     gene            complement(1478..>1829)
                     /locus_tag="VK429_04975"
     CDS             complement(1478..>1829)
                     /locus_tag="VK429_04975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011498906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HLN91193.1"
                     /translation="PNVSWVNYPGLPSHPSHALAKRYHHRGLYGAILGFGIKGGVAAG
                     KKFIESLKLFSHLANIGDAKSLVIHPASTTHQQLTPAEQLATGVTDDFVRLSVGIENV
                     DDIIADLDQALRKS"
BASE COUNT          285 a          589 c          599 g          356 t
ORIGIN      
        1 gcgagaggtc gcgctcgacg gaccgggcca gctcgagcag cgggaactgc cccttcatgg
       61 cccgcttcag catcgtgccc gggatcaaca tccggttgat ctcgttggtc ccctcgaaga
      121 tccggttgat ccgctcgtcc cggtaaaacc gctcggccgg gtactcctgc gtgtagccgt
      181 acccgccgaa gatctggacg gtctcgtcga ccaccagggc gaggacgtcg ctgcagaaga
      241 ccttcgcgac ggcgcactcg atggagtaat cctcgatccc ctgctggtac gcttcgtagt
      301 agtcggggat ccccttcggg acggccgcca ggcggtcgtc gatcatcccg gccacgcgat
      361 acacgagggc ctcggaggcg aacagggccg ccgcagtatc ggcgatcttc tcccggatgg
      421 cgccgaacgt cccgatggtg acgccgaact gcttgcgcag gttcgcgtac cgcacccctt
      481 ccgcgaaggc gaattttccg gcgccggtga cgcaggcgcc gagcttcagg cgcccgacgt
      541 tcagcacgtt gaaggcgatc ttgtgcccct tgccgatctc gccgagcacg ttttccacgg
      601 ggaccttcgc gtcctcgaga atcagcgagg tcgtcgagga gccgcggatc ccgagcttct
      661 tctcctccgg gccgggcttc accccctcga aggtgcgctc gaccaggaac gcggtgaaat
      721 gctgccggtc gatcttggcg aagaccgtgt agaggtcggc gaaactcccg ttcgtcgtga
      781 actgcttggt cccgttcagg agatagtgct tcccgtccgg cgtgagggtg gcggtcgcct
      841 tggcgccgag ggcgtcgctc ccggagtcgg gctccgtgag gcagtaggcg gccatccact
      901 cgccggtgat gatcttcccg aggtatctct ccttctgctc cttcgtcccg tagtagacga
      961 gggggagggt gccgatcccc gagtgcgcgg tgtacgccac ggagaagccg ccgtagatgg
     1021 acgccttctc cgccgccagc atgctcgtgg tcttcgggag atcgagcccc ccgtactcct
     1081 cgggggcgtc gatcatcagg aggcccagct ccccgaactg gcgcaggagc ttgaccatca
     1141 ggtcgaagtc gtggttctcc agcttttcca cgtgggggag gaccttttcg cggaggaact
     1201 ggtccgtggt gtcggcgagc tggatctgct cgtcgctgaa ctcctcgggg gtgaacacgg
     1261 tccccgcggt tgggtcgtcg atcaggtacc cgccgccgtg cagaatcttc tctccggtcg
     1321 tcatcggctc acctcggtcc tcgtgcttcc ccggcttccc ggggcccttt acatttcata
     1381 cttctactta acgtcaatgt caagtacgaa agtaaataaa tgcccggagg gcgaaccccc
     1441 cgggcggatg gaacgagacc agcgccttct acaccgatca gctcttgcga agcgcctggt
     1501 cgaggtccgc gatgatgtcg tcgacgttct cgatcccgac cgagaggcgg acgaagtcgt
     1561 ccgtgacgcc ggtggccagt tgctccgccg gagtgagctg ctggtgcgtc gtggacgccg
     1621 ggtggatcac gaggctcttc gcgtcgccga tgttcgcgag gtgggagaag agcttgaggc
     1681 tctcgatgaa cttcttcccc gccgcgacgc cgcccttgat gccgaacccg aggatcgcgc
     1741 cgtacagccc gcgatggtga tacctcttcg cgagggcgtg cgaggggtgg cttggcagcc
     1801 ccgggtagtt gacccaggag acgttggga
//
LOCUS       DATGYW010000359         1795 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_245472, whole genome shotgun sequence.
ACCESSION   DATGYW010000359 DATGYW010000000
VERSION     DATGYW010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1795
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245472"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="VK429_04980"
     CDS             <1..272
                     /locus_tag="VK429_04980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015051156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HLN91194.1"
                     /translation="LSGRNIPLASRIMTIADTFDAMTSTRAYRKALPVADAIAEIRRC
                     SGTQFDPDIVPAFLACQPKIVMRGDVNRPEGFKAAFPVEFRPQLA"
     gene            292..876
                     /gene="amrA"
                     /locus_tag="VK429_04985"
     CDS             292..876
                     /gene="amrA"
                     /locus_tag="VK429_04985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014624006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system protein A"
                     /protein_id="HLN91195.1"
                     /translation="MTEPVGTGPGAYLDESQRKALLEIARRALEGYLGAGKIPHEEGT
                     RGTLAAPGAAFVTLTKNGRLRGCIGYTEAVAPLFKVVQECAVAAATEDPRFPPVSPME
                     LPSLRVEISVLTPLVPIRPEEVEIGRHGLMVSQGRMRGLLLPQVPVEWGWDRETFLDQ
                     TCVKAGLSPSAWRHGATLRAFTAEVFSEEEKKAT"
     gene            complement(877..>1795)
                     /locus_tag="VK429_04990"
     CDS             complement(877..>1795)
                     /locus_tag="VK429_04990"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLN91196.1"
                     /translation="GGTGRLLRFLYVGATIVLQPEFDPEEALRTIERRSVTRVLLTPT
                     MMAQVLAFPSAGKFNLSTLRTVLYGGAVIPLDLLKRAIRFFRCGFVHSHGQVESAGIL
                     TVLHEEDHSLDESTPYMRKLMSVGKEAIGVEVRVVGEDGREIAPNEVGEIVARGPNVF
                     EGYRNDPDLTAKVLRDGWLRTGNVASIDEEGYIYIVDRKRDLLTVEGISISPREIENI
                     LCEHPSVKEAAVVPRPDYTMGEVPVAVIVLREGTKEDPEEVLSHCRRNMAPFKVPRAI
                     EFVPALPRNAQGKVLKARLRDRQASRHPR"
BASE COUNT          297 a          614 c          592 g          292 t
ORIGIN      
        1 gcctctcagg gagaaacatc cctctggcgt cccgtatcat gacgatcgcc gacaccttcg
       61 atgcaatgac atccacccgc gcctacagaa aggcgctccc cgtcgccgac gcgatcgccg
      121 agatccggcg ctgctccggg acccagttcg accccgacat cgtccccgcg tttcttgcct
      181 gccagccgaa gatcgtcatg cgcggggacg tgaaccgccc agagggattc aaggcggcgt
      241 ttcccgtgga gttccgaccg caactcgcct gatatacgat ggagtgagtc catgacggag
      301 cctgtcggga cgggacccgg ggcgtacctc gacgagtcgc agcgaaaagc ccttctcgag
      361 atcgcacgca gggcgctgga agggtacctc ggagcgggga agattccgca cgaggaaggg
      421 acgcggggaa cgctggccgc acccggagcc gcgttcgtca cccttacgaa gaacggacgg
      481 ctgcgcggct gcatcggcta caccgaggcg gtggcgccgc tcttcaaggt ggtccaggag
      541 tgcgccgtgg ccgcggccac cgaggatccg cgctttcccc ccgtctcccc gatggaactc
      601 ccctccctgc gcgtcgagat ctccgtcctc acccccctgg tccccatccg ccccgaagag
      661 gtcgagatcg gcaggcacgg gttgatggtc tcgcagggga ggatgcgggg actgctgctg
      721 ccgcaggtcc ccgtcgagtg ggggtgggac cgggagacgt tcctcgacca gacgtgcgtg
      781 aaggccggcc tgtccccctc ggcgtggcgg cacggggcga cgctccgggc gtttaccgcg
      841 gaagtgttct ccgaagagga gaagaaagcg acgtgatcag cgaggatgtc gggaggcctg
      901 ccggtcccga agcctggcct tgagcacttt cccctgggcg ttccgcggga gggcgggcac
      961 gaactcgatc gcgcgtggca ccttgaaagg ggccatgttg cgccggcagt ggctcaggac
     1021 ctcctccggg tcctccttcg ttccctcccg caacacgatc accgccacgg gcacttcgcc
     1081 catcgtgtag tcgggccggg gcaccacggc ggcctccttc acggaagggt gctcgcacag
     1141 gatgttctcg atctcccgcg gggagatcga gatcccctcg acggtcagca ggtcccgttt
     1201 ccggtcgacg atgtagatgt acccctcctc gtcgatggac gccacgttcc ccgtccggag
     1261 ccagccgtcc cgtaagacct tcgcggtgag gtccgggtcg ttccggtacc cctcgaacac
     1321 gttcggtccg cgcgccacga tctcgcccac ctcgttcggg gcgatctccc ggccgtcctc
     1381 gccgaccacc cggacctcga cgccgatcgc ctcttttccg acggacatga gcttccgcat
     1441 atagggagtg ctctcgtcca gcgagtggtc ctcctcgtgc agaaccgtca ggatgccggc
     1501 ggactccacc tggccatggg aatggacgaa accgcaccgg aagaaccgga tggcgcgctt
     1561 gagcaggtcc aggggaatca ccgcgccgcc gtacaggacg gttcgcaggg tggaaaggtt
     1621 gaatttcccg gcggagggga aggcgaggac ctgcgccatc atggtggggg tgaggagcac
     1681 ccgcgtgacc gaccgtcgtt cgatcgtgcg cagcgcctcc tccgggtcga actccggctg
     1741 caggacgatc gtcgccccga cgtaaaggaa acgcaggagc cttcccgtcc cgccg
//
LOCUS       DATGYW010000360         1897 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_129341, whole genome shotgun sequence.
ACCESSION   DATGYW010000360 DATGYW010000000
VERSION     DATGYW010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129341"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1897
                     /locus_tag="VK429_04995"
     CDS             <1..>1897
                     /locus_tag="VK429_04995"
                     /inference="COORDINATES: protein motif:HMM:NF011501.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HLN91197.1"
                     /translation="GLHHLVYEVVDNAIDEAMAGYCDTISVIIHADNSVTVEDNGRGI
                     PIDIMPEEGKPAAEVVLTILHAGGKFDRDTYKVSGGLHGVGVSVVNALSETLTAEIRR
                     DGAVHQIDFVRGETVSPLKVTGKSRKNGTKITFKPDTEIFTETEFSFDVLSQRLRELS
                     FLNAGLKISIVDERNDKSHDFQYKGGIVSFVQHLNRNKTPLHAKPVLVEGEKDGVQVE
                     VALQYNDSYQETLFFFVNNINTHDGGTHLTGFRQALTRAINQYANQGNLLKGHKENLR
                     GDDLNEGLTAVVSVKVPEPQFEGQTKNRLGNSEVKGLVDSMVYEKLMTCFEENPSVPK
                     KIIEKGLEAARAREAARKAKELVRKGPMDAAGLPGKLADCQEKDPARCELFIVEGDSA
                     GGSAKQARDRRYQAILPLKGKILNVEKARIDKMLTSAEIRTMVTALGTGIGKENYEAG
                     KLRYGKVIIMTDADVDGAHIRTLLLTFFFRHMRELLERGNVFIAQPPLFGVRRGKEMT
                     YLKDDAAFRKYLIELGIAGRRVAGVDGTGALTGQRLAAWLTKISRMEQVASRAERRGM
                     PAFVFLSLSSRGTEGAEALSTEKTAQKFFKALLAEWKVTRPDVTNAAFSFDPDPDSDG
                     EGVRARLS"
BASE COUNT          375 a          574 c          680 g          268 t
ORIGIN      
        1 gggctgcacc acctggtcta cgaggtggtc gacaacgcga tcgacgaggc gatggcgggg
       61 tattgcgaca cgatctccgt catcatccac gccgacaatt cggtcacggt ggaagacaac
      121 gggcgaggga tcccgatcga catcatgccg gaggagggga agcccgccgc cgaggtggtc
      181 ctgacgatcc tgcacgcggg cggcaagttc gaccgcgaca cgtacaaggt gtcaggcggg
      241 ctccacggcg tcggcgtctc cgtggtgaac gccctctccg aaaccctcac cgccgaaatc
      301 cgccgggacg gcgcggtgca ccagatcgat ttcgtccggg gggaaaccgt atcgcccctg
      361 aaggtgaccg ggaagtcgcg caagaacggg acgaagatca ccttcaagcc ggacacggag
      421 atcttcaccg agacggagtt ctccttcgac gtcctctccc agcggctgcg ggagctgtcg
      481 ttcctgaacg cggggctcaa gatctccatc gtcgacgagc ggaacgacaa gtcccacgac
      541 ttccagtaca agggcggcat cgtctccttc gtgcagcacc tgaaccggaa caagacgccg
      601 ctccacgcca agccggtgct ggtcgaaggg gagaaggacg gcgtccaggt cgaggtggcg
      661 ctccagtaca acgactcgta ccaggagacg ctcttcttct tcgtcaacaa catcaacacg
      721 cacgacggcg gaacccacct gaccggcttc cggcaggcgc tgacgcgcgc gatcaaccag
      781 tacgcaaacc aggggaacct tctcaagggg cacaaggaaa acctgcgcgg ggacgacctg
      841 aacgaggggc tgacggcggt ggtgtcggtg aaggttcccg agccgcagtt cgaggggcag
      901 acgaagaacc gcctcgggaa cagcgaggtg aaggggctgg tcgactcgat ggtctacgag
      961 aagctgatga cgtgcttcga ggagaacccg tcggtaccga agaagatcat cgagaagggg
     1021 ctggaggcgg cgagggcgcg cgaggcggcg cgcaaggcga aggagctggt gcgcaagggg
     1081 ccgatggacg ccgcggggct gcccgggaag ctggccgact gccaggagaa ggacccggcg
     1141 cggtgcgagc tgttcatcgt cgagggcgac tcggcgggcg gctcggcgaa gcaggcgcgc
     1201 gaccggcggt accaggcgat cctgccgctc aagggaaaga tcctgaacgt cgagaaggcg
     1261 cggatcgaca agatgttgac ctcggccgag atccgcacga tggtgacggc gctggggacc
     1321 gggatcggca aggagaatta cgaggcgggc aagctgcgct acggcaaggt catcatcatg
     1381 accgacgcgg atgtcgacgg cgcgcacatc cgcacgctgc tgctcacctt cttcttccgc
     1441 cacatgcggg agctgctcga gcgcgggaac gtcttcatcg cccagccgcc gctgttcggc
     1501 gtgcggcgcg gcaaggagat gacgtatctc aaggacgacg cggcgttccg gaaatacctc
     1561 atcgagctgg ggatcgccgg ccggcgggtc gcgggggtcg acggaacggg ggccctcacg
     1621 gggcaacggc tcgcggcgtg gctcacgaag atctcccgga tggagcaggt cgcgtcgcgc
     1681 gcggaacggc gggggatgcc cgccttcgtc ttcctgtcgc tgtcttcgcg cgggacggaa
     1741 ggggcggagg cgctctcgac ggagaagacc gcccagaaat tcttcaaggc gctgctcgcc
     1801 gaatggaagg tgacgcggcc cgacgtgacg aacgcggcgt tctcgttcga cccggacccg
     1861 gattcggacg gtgaaggggt gcgggcgcgc ctctcgt
//
LOCUS       DATGYW010000361         3521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_300732, whole genome shotgun sequence.
ACCESSION   DATGYW010000361 DATGYW010000000
VERSION     DATGYW010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3521
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300732"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..383
                     /locus_tag="VK429_05000"
     CDS             <1..383
                     /locus_tag="VK429_05000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91198.1"
                     /translation="LDIRLIASSAVPVEELARRENVPSTLLKALEPGIVRIPALREHL
                     EDVPLLLHHFLQEANRERKKPLRGFTTSALSSLETYRWPGNVRELRDLVRAVAGRKKQ
                     GTMIDATEIPPEILYRNLRMQPPR"
     gene            413..1444
                     /locus_tag="VK429_05005"
     CDS             413..1444
                     /locus_tag="VK429_05005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006628066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HLN91199.1"
                     /translation="MKASFFREHGGPDRVEFGDLPEPAAGPGQVRVRVKAAALNHLDI
                     FVRNGIPGIPVALPHVMGSDGAGVIESTGAGVTRVKTGDEVVLNPGINCGECEFCLSG
                     EHSLCVTFHLLGEHIAGTFADVVVAPAVNAYPKPAGLSWEESAAFPLTFLTAWRMLVT
                     KARVKPGESLLIVGIGGGVAVAALQIARLLGLTVFVTSGSPEKLDHARALGANAGIDH
                     GKTDFSREIRKLTGKRGVDVVLDSVGKATWKQSIAAAAKGGRLLTCGATTGPDPQTDL
                     GRIFWNQLTVYGSTMGTHAEFAGMLKLFRDGKVKPVVDAVFPLSAAGEALRRLEEKRQ
                     FGKIVLRVG"
     gene            1506..1796
                     /locus_tag="VK429_05010"
     CDS             1506..1796
                     /locus_tag="VK429_05010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91200.1"
                     /translation="MITFEYRFDILPGKNDAYEKYVKGQGKNIWSKYRGVKAVRKYRS
                     MLGGSSPQRVVQVDLDSLATLEKILTDPGFKRAKEKFHGLVTHVSDSLLVSI"
     gene            complement(1833..2660)
                     /gene="rsmI"
                     /locus_tag="VK429_05015"
     CDS             complement(1833..2660)
                     /gene="rsmI"
                     /locus_tag="VK429_05015"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012174530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HLN91201.1"
                     /translation="MGAGTLYVVATPLGNLEDITFRAVRVLKEAPVIACEDTRRTVKL
                     LNRYEIRTPMVVFHDYNKARAGAGILRRLREGESVALVSDAGTPAISDPGYDLVRDAV
                     AQGIPVEVIPGPSALVAALVVSGLPTDHFAFEGFLPNRPARRRKAIAGLSRETRTMIF
                     YESPHRLASFLADASAELGERRACIVRELTKVHEEILRGTLPELSAEIAGRSSILGEV
                     TVVVAGAPKTVELSVEEIVRAAVEDASGSSRDLAKEIAERTGLSRKEVYEEILRQRK"
     gene            complement(2669..>3521)
                     /locus_tag="VK429_05020"
     CDS             complement(2669..>3521)
                     /locus_tag="VK429_05020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015722824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLN91202.1"
                     /translation="LGASVIPASSGNTARQIQIMKDFKTTALVSTPSYAMLVADTIRE
                     MGIPVSALSLKYGLFGGEPWSEKMRQEIQDALGIIATDNYGLSEVIGPGVSGECLERN
                     GLHINEDHFLVEVIDPKTLLPVPPGRTGELVITTLTKEAFPMVRYRTRDLTSLHTGAC
                     PCGRTGRRMSRLAGRTDEMLIIRGMKVSPAKIESLLFEIEGQEPNYRIVIDRKGAMDE
                     VTVLVEAAAEASFGQERRHVGTTVETIRKRLTHELGVTVDVKLVGKKALEPVDGKAMR
                     VIDNRKL"
BASE COUNT          572 a         1209 c         1157 g          583 t
ORIGIN      
        1 cgctggacat ccggctcatc gcttccagcg cggtcccggt ggaggaactg gcgcgacggg
       61 agaacgttcc atcgacgctt ctcaaggcgc tcgagccggg gatcgtgcgc atccccgcac
      121 tgcgggagca cctcgaggac gtgccgttgc tgctgcacca tttccttcag gaggcgaacc
      181 gggagcggaa gaaaccgctc cgcggattca ctacctccgc gctctcctct cttgaaacct
      241 accgctggcc ggggaacgtc cgggagttgc gggatctcgt ccgcgccgtc gcgggcagga
      301 agaagcaggg gacgatgatc gacgccacgg aaatcccgcc cgagatcctg taccggaatc
      361 tgcgcatgca gcccccgcgg taacccgttc cttaccgaca aggaggcgtc ccatgaaagc
      421 ctcatttttc cgcgaacacg gggggccgga tcgcgtcgag ttcggtgacc ttccggaacc
      481 ggccgccggg ccggggcagg tccgcgtgag ggtcaaggcg gccgcgctca accacctcga
      541 catcttcgtc cggaacggca tccccggcat cccggtggcg ctcccccatg tgatggggtc
      601 ggatggtgcc ggcgtgatcg agtcgacggg cgccggggtc acccgggtga agaccggcga
      661 cgaagtcgtg ctgaacccgg ggatcaactg cggggagtgc gagttctgcc tttcggggga
      721 gcattccctt tgcgtcacct tccacctcct cggagagcac atcgccggga cgttcgcgga
      781 cgtcgtcgtc gcccccgcgg tgaacgccta tccgaaaccg gcgggccttt cctgggagga
      841 gtcggcggcg ttcccgctca cgttcctcac cgcgtggcgg atgctcgtca cgaaggcgcg
      901 ggtgaaaccc ggcgagtcgc tcctgatcgt cggcatcggg ggaggcgtcg cggtggccgc
      961 gctgcagatc gcgaggctcc tcgggctcac ggtgttcgtc acctcgggga gcccggagaa
     1021 actcgaccac gcgagggcgc tcggagcgaa tgcagggatc gaccacggca agacggactt
     1081 ctccagggag atccgcaagc tcacggggaa gcgcggggtc gacgtcgtcc tcgattcggt
     1141 gggaaaagcc acgtggaagc agtcgatcgc cgccgcggcc aagggagggc ggctcctcac
     1201 ctgcggcgcc accaccggcc cggatcccca gaccgacctc gggcggatct tctggaacca
     1261 gctgaccgtg tacggctcca ccatggggac gcacgcggag ttcgccggga tgctgaagct
     1321 cttccgggac gggaaggtga aaccggtggt cgacgcggtc ttcccgctgt cggcggccgg
     1381 ggaggccctc cggcgcctcg aggagaagcg ccagttcggc aagatcgtcc tgcgcgtcgg
     1441 ttgacggtgc cggcgccgtt tggtacggta cgggacaggc aggaatttcc aaaggaggca
     1501 gcgcgatgat cactttcgag taccggttcg acatcctccc cggcaagaac gatgcgtacg
     1561 agaaatacgt aaagggacag ggaaagaaca tctggtcgaa gtacaggggc gtgaaggccg
     1621 tgcggaagta caggagcatg ctgggaggct cctccccgca gcgcgtggtc caggtcgacc
     1681 tcgactcgct ggccacgctc gagaagatcc tcaccgaccc ggggttcaag agggcgaagg
     1741 agaagttcca cgggctggtc acgcacgtga gcgactcgct gctcgtctcg atctgacccg
     1801 ccgggcgggg gacgctcctt cccccgccct tctcattttc tctgccgcag gatctcctcg
     1861 tagacttcct tccgcgacag cccggtgcgc tcggcgatct ccttcgcgag gtcccgggac
     1921 gaccccgagg cgtcctcgac cgcggcacgg acgatctctt ccaccgacag ttccaccgtc
     1981 ttcggcgctc cggccaccac cacggtgacc tctccgagga tgctcgaccg cccggcgatc
     2041 tccgccgaca gttccggcag cgtccctcga aggatctcct cgtgcacctt cgtcagctcc
     2101 cgcacgatac aggcacgtcg ctccccaagc tcggccgatg cgtccgcgag gaacgaggcg
     2161 aggcggtgcg gggactcgta gaagatcatc gtccgcgtct cgcgggatag acccgcgatc
     2221 gccttgcgtc gccgcgccgg acggttcggg aggaagccct cgaaggcgaa gtggtcggtg
     2281 ggcaggccgg agaccaccag ggcggccacc agcgccgacg gaccggggat cacctccact
     2341 ggaatcccct gcgcgacggc gtcccgcacc aggtcgtacc ccgggtccga gatggcggga
     2401 gtgcccgcgt cggagacgag cgccacgctc tccccttcgc gaaggcgccg gaggatcccc
     2461 gcccccgccc gcgccttgtt gtagtcgtgg aagacgacca tcggcgtgcg gatctcgtac
     2521 cggttcagca gcttcaccgt gcgccgcgtg tcctcgcagg cgatcaccgg cgcctccttg
     2581 aggacacgca cggcacggaa ggtgatgtcc tccaggtttc ccagcggcgt tgccacgacg
     2641 tacaaggtcc cggcacccat ttccgcccct acaacttcct gttatcgatg acgcgcatcg
     2701 ccttcccgtc caccggctcc agagccttct tccccacgag cttcacgtcc accgtcaccc
     2761 ccagttcgtg ggtcagccgt ttccggattg tctccaccgt cgtcccgacg tgccgtcgct
     2821 cctgcccgaa cgacgcctcc gcggcggcct cgacgaggac cgtcacctcg tccatcgccc
     2881 ccttccggtc gatcacgatc cggtagttcg gctcctgccc ctcgatctcg aagagcaggg
     2941 actcgatctt tgcgggagac accttcatcc cgcggatgat cagcatctcg tccgtcctgc
     3001 ccgccaggcg gctcatccgc cgccccgtcc gcccgcacgg gcaagccccc gtgtggaggc
     3061 tggtgagatc ccgggtccgg taccggacca tcgggaacgc ctccttggtc agcgtcgtga
     3121 tgacgagctc ccccgtccgg ccaggcggta cggggagaag ggttttcggg tcgatgacct
     3181 cgacgaggaa gtggtcctcg ttgatgtgaa ggccgttgcg ctcgaggcac tcgccggaca
     3241 cccccggacc gatgacctcg gagagaccgt aattgtcggt ggcgatgatc ccgagggcgt
     3301 cctggatctc ctggcgcatc ttctcggacc acggctcccc gccgaagagg ccgtacttga
     3361 gggagagcgc cgaaacgggg atccccatct cgcggatcgt gtccgcgacc agcatcgcgt
     3421 aggaaggggt ggacaccagc gccgtcgtct tgaagtcttt catgatctgg atctgtcgcg
     3481 cggtgttccc gctggacgcc gggatcacgg aggcgccgag c
//
LOCUS       DATGYW010000362         1567 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_180706, whole genome shotgun sequence.
ACCESSION   DATGYW010000362 DATGYW010000000
VERSION     DATGYW010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_180706"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1305)
                     /locus_tag="VK429_05025"
     CDS             complement(<1..1305)
                     /locus_tag="VK429_05025"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HLN91203.1"
                     /translation="MERRAMRIGKGNMTPGRILLLLLLAIVFASLLARPVWAEGPPRP
                     VNYYVDAAMANNPSLASMKARIAVKENEAVRAGALADPKAWIGLVNVPTNTWSLREED
                     MTGKEVGISQMLPYPGRRENSSSIVAREKEQTEFELAEMRNMLRADVKMAYAELSTVR
                     VQAEVVRQVRAVLEQIVEVSREMFAVGKGSQPDVLRGQVEFQKMREMLLMLENRQRVL
                     SVRLNTLSVLLPGEPVPPLDNLAEFRLDLSADDLRKIYFEERPARKAVEARIRRGDLL
                     IRQAEYEGKPDFEVSASYMQRDNAPDGMKRSDMMSAMVSMTLPVWRKGKVDPGIRAMA
                     AEKEMAVREQETLDNETANGIGSALSSLGNFGSVATLYRTTLIPQAEQSEQSNLEAYR
                     VGKIDFPMLMDSVMTVLNFRKEYLGMVGEMHVTKARLEAAVGR"
BASE COUNT          272 a          558 c          420 g          317 t
ORIGIN      
        1 cctgcccact gcggcctcca gccgggcctt tgtcacgtgc atctcgccga ccatcccgag
       61 gtactccttc cggaaattca ggacggtcat cacggaatcc atgagcatgg ggaagtcgat
      121 cttccccacc cggtacgcct cgaggttgga ctgttcggac tgctccgcct gggggatcag
      181 ggtggtccgg tacagcgtcg ccaccgaccc gaaattcccg agggaagaca acgccgatcc
      241 gatcccgttg gcggtttcgt tatccagggt ttcctgctcg cgaaccgcca tttccttctc
      301 cgcggccatc gcccggattc ccggatccac cttccctttt ctccatacgg gaagcgtcat
      361 cgacaccatc gcggacatca tgtccgaccg cttcatcccg tcgggcgcgt tgtcccgctg
      421 catgtaggag gccgaaacct cgaaatccgg tttgccttcg tactccgcct gccggataag
      481 gagatcccct ctgcgtattc tcgcctcgac cgccttgcgc gccggacgct cctcgaaata
      541 gatcttcctc aggtcatccg cggagaggtc cagccggaac tccgcgagat tgtcgagcgg
      601 ggggaccggt tctccgggca gaaggacaga gagggtgttc aggcggaccg agaggacacg
      661 ctgccggttt tccagcatca ggagcatctc ccgcatcttc tggaactcca cctgcccgcg
      721 caggacgtcg ggctgcgacc ccttgcccac ggcgaacatc tcccgggaga cctccacgat
      781 ctgttcgagg acggcccgga cctggcgcac gacttctgcc tggacccgca ccgttgagag
      841 ttccgcgtag gccatcttca cgtccgcgcg caacatgttc ctcatctccg ccagttcgaa
      901 ctcggtctgc tccttctccc ttgcgacgat gctggaactg ttctcccgcc tgccgggata
      961 cgggagcatc tgggagatgc cgacctcctt ccccgtcatg tcctcctcgc ggagcgacca
     1021 tgtattcgtc gggacattga caaggccgat ccatgccttg ggatcggcca gagcccccgc
     1081 ccgcacggcc tcattctcct tcaccgcgat ccgcgccttc atcgaggcca gggacggatt
     1141 gttcgccatt gccgcatcca cgtaataatt caccggccga ggcggcccct ccgcccagac
     1201 cggcctcgcc aacaacgacg cgaacacgat cgccaggagg aggaggagga ggattctccc
     1261 cggtgtcatg ttccctttgc cgatccgcat cgctcgtctc tccatcacgt gatcgtcctt
     1321 tccgcaatcc gctcggggaa tttcacttca cccatattat cgatcggcgg caaacaaaaa
     1381 taccttatat aatcaatggt tggtatggat tctcaatatc atcccgcatg tccccctcac
     1441 ttccccgcgt ccgccggcgg gcagcagttg ctcccggatc cgcatccgcc cgatcctgcc
     1501 gccgccgccc ggtcctgccg gaaggagctg gatcctccaa gcagcagcgt cgccgtcacc
     1561 gaaagga
//
LOCUS       DATGYW010000363         1692 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_25422, whole genome shotgun sequence.
ACCESSION   DATGYW010000363 DATGYW010000000
VERSION     DATGYW010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25422"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VK429_05030"
     CDS             <1..330
                     /locus_tag="VK429_05030"
                     /inference="COORDINATES: protein motif:HMM:NF014689.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump"
                     /protein_id="HLN91204.1"
                     /translation="GGKMVYEGGWGDGEEGNGGKDPTRGMSLVLLSVATSIDALAVGL
                     SLGVLRNEGIVYPGIVIGIVACTFTAAGLHLGKRLGTAFGRRMEVVGGLVLVAIGVKI
                     LFGHYSG"
     gene            354..1046
                     /locus_tag="VK429_05035"
     CDS             354..1046
                     /locus_tag="VK429_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011419546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HLN91205.1"
                     /translation="MGEEGLDILTRLLVATMAGGIIGLERSYHGRPAGFRTHTLVCLA
                     SSLLMLVTVYQSRWFTGSTLDTVRVDPTRMAQGVMTGIGFLGAGVIMREGLTVRGLTT
                     AASIWVTAAIGILAGTGFYSAVLMGSVITFGILTVLRKAETRMPSQIFASNTIVFGRD
                     NYMSEAEIRELHVKNGFSVAKISYRLLERGAQLEYRMTVYTRDPGNIEKLSKTLLGLT
                     SIVEFNISMAGD"
     gene            1106..>1692
                     /locus_tag="VK429_05040"
     CDS             1106..>1692
                     /locus_tag="VK429_05040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018132041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HLN91206.1"
                     /translation="MKNNALALRAINTIRFLAVDAVQKAGSGHPGTPMGLAPLSYLLW
                     TKYLRYNPANPDWAGRDRFVLSCGHASMLLYSLLHLTGFDVTLDDLREFRQWGSRTPG
                     HPEAGHTPGVEVTTGPLGQGIGNAVGMAMASRMMAQRFNRPGHEIVSHRIVALCSDGD
                     LMEGVSSEAASLAGFQRLGNLVAFYDDNRITIEGST"
BASE COUNT          301 a          489 c          587 g          315 t
ORIGIN      
        1 ggggggaaga tggtgtacga gggaggctgg ggagacgggg aggaggggaa cggcggaaag
       61 gaccccacgc gcgggatgtc cctggtcctt ctgtcggtgg cgaccagcat cgacgcgctg
      121 gcggtggggc ttagcctcgg cgtgcttcgc aacgagggga tcgtctaccc ggggatcgtg
      181 atcgggatcg ttgcgtgcac cttcaccgct gcggggctcc acctcggcaa gcgtcttggc
      241 accgcgttcg gcaggcggat ggaagtcgtc gggggactcg tcctcgtcgc gatcggcgtg
      301 aagatcctgt tcggccatta cagtggttga cgccacggaa agaggttcac ggtatgggtg
      361 aggaaggact cgacatactc acgcgcctgc tggttgcgac gatggccggc ggcatcatcg
      421 ggctggaacg gagttatcat ggacgccccg cgggtttcag gacgcatacg ctggtctgtc
      481 tcgcatccag cctgctgatg ctcgtcacgg tgtaccaatc caggtggttt accgggtcga
      541 cgctcgatac cgtccgggtg gacccgacgc ggatggccca gggggtcatg accgggatcg
      601 gctttctcgg cgcgggcgtc atcatgcggg aaggactcac cgtgcggggg ttgacgaccg
      661 cggcctccat ctgggtcacg gctgcgatag ggattctcgc agggacgggc ttctacagcg
      721 ccgtcctcat gggatcggtg ataaccttcg ggatactgac ggttttacgg aaggcggaaa
      781 cccggatgcc ttcgcagatc ttcgcgagta acaccatcgt cttcggtcgg gacaattaca
      841 tgtccgaggc ggaaatcagg gaattgcatg tgaaaaacgg tttttccgtc gccaagatca
      901 gctacagact gctggagagg ggtgcgcagc tggaataccg gatgaccgtg tacaccaggg
      961 atcccggcaa tatcgaaaaa ttgtcgaaaa ccctccttgg tttgacctcg attgtcgaat
     1021 tcaacatttc catggcgggg gattaaaagg agaggatccg cgatggtaat atgacctttt
     1081 ggcattgcaa cccatggagg ccaccgtgaa gaacaacgcg ctcgcgttgc gggcgatcaa
     1141 caccatccgg ttcctggcgg tcgacgcggt ccagaaggcg gggtcggggc accccggcac
     1201 cccgatgggg ctggcgccgc tgtcgtacct gctctggacg aagtatctga ggtacaaccc
     1261 ggcgaacccc gattgggccg ggagggaccg gttcgtcctc tcctgcggcc acgcctccat
     1321 gctcctctac tccctgcttc atctcaccgg gttcgacgtg accctcgacg acctgcggga
     1381 gttccggcag tgggggagca ggaccccggg gcaccccgag gccgggcaca ccccgggcgt
     1441 cgaggtgacc acgggcccgt tggggcaggg gatcgggaac gccgtcggga tggcgatggc
     1501 ttcccggatg atggcgcagc ggttcaaccg ccccgggcac gagatcgtct cccaccggat
     1561 cgttgcgctg tgctccgacg gcgacctgat ggagggggtc tcctccgagg cggcgtccct
     1621 ggcgggattc cagcgccttg ggaaccttgt ggcgttctac gacgacaacc ggatcaccat
     1681 cgaggggtcc ac
//
LOCUS       DATGYW010000364         2035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_129582, whole genome shotgun sequence.
ACCESSION   DATGYW010000364 DATGYW010000000
VERSION     DATGYW010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129582"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..>2035)
                     /locus_tag="VK429_05045"
     CDS             complement(20..>2035)
                     /locus_tag="VK429_05045"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterial transcriptional activator
                     domain-containing protein"
                     /protein_id="HLN91207.1"
                     /translation="DSLPKTSVDQDPWLRYWDGACRLPFDPAESRRSFESAFRQFHGL
                     RDVPGVFLAWSGIVESIIYGAEGLKPLDRWFSLLDGLMSEFGDFPSEEVGARVTCSMV
                     RALALRRPLYSAMEGWADRALELSRAGKDIPTRIEALIHLASYRYGGGELRKLGILLD
                     SLGEVIRRPDVSPLALLTVNWVEAAHANLVSRCDRCIRAVREGLGLAETTGVHVMDYM
                     LMGQGVLCSLKSGDFVTAKGYLGTMASSLPLAKPWEASFYHYAAAWDALLRGDSARAA
                     HHSDQGLNLCREMGNPWTLHLALLQRSNLFHAAGEDGKAAGHLSEACEVGAQSRNELA
                     HFSCLLTQAYYYLHEGNESAALLSLREMMRIGREMGYVSLPMWLPGAMERVAAKALEE
                     GIEVPYAQDLIRRNALLPEGASELENWPWPLKVFTLGRFDLIREDRQVPFSRKVQQKP
                     LSLLKALIALGGKDVPEEQLTDALWPEADGDLAHQSFATTLHRLRLLSGNEKSLSLRE
                     GRLTLDGRHGWVDAWAFEGLLRRAETASRAGTDRSSDAKALRLAEQAISLYKGPFLAG
                     DAAHPWIVSTRERLQSKFLKAVVEVGRRWEIAGEWEKAAACYHGGLDVDDLAEVFYRR
                     LMVCLKRMGRDSEAHAAYHRCRKTFAARLGRNPSPETETVFRVPNPS"
BASE COUNT          353 a          687 c          664 g          331 t
ORIGIN      
        1 gcaggatgtc gaggaatgtc tacgaggggt tcggcacgcg gaagacggtt tcggtttccg
       61 gggaggggtt ccggccgagc cgggcggcga acgtcttccg gcagcggtgg taggccgcat
      121 gggcctcgct gtcccggccc atccgcttga ggcagaccat caggcggcgg tagaagacct
      181 ccgcgagatc gtccacgtcc aggccaccgt ggtaacacgc ggcggccttc tcccattccc
      241 ccgcgatttc ccaccgacgc cccacctcca cgacggcttt caggaacttg ctctgaagcc
      301 gttccctggt cgatacgatc caggggtggg cggcatctcc cgccaggaag ggccctttgt
      361 acagggatat ggcctgctcc gccaggcgga gagccttcgc gtccgaagac cggtccgtcc
      421 ccgccctgct tgcggtttcg gcccgccgga gaagtccctc gaaggcccac gcgtccaccc
      481 aaccgtggcg gccatccagc gtcaggcggc cctcccgcag cgagagggat ttctcgtttc
      541 cggagagcag gcgcaaccgg tggagcgtcg tggcgaagga ctggtgcgca aggtcgccgt
      601 cggcctcggg ccagagcgcg tcggtcaact gctcctcggg aacgtccttt ccccccaggg
      661 cgatcagggc cttcagcaac gacagcggct tctgctgaac ctttcgggag aagggaacct
      721 gccggtcctc cctgatcaga tcgaaccgcc ccagcgtgaa aaccttgagg ggccagggcc
      781 agttttccaa ttccgatgcc ccttccggaa gcagggcatt cctccggatg aggtcctgcg
      841 cataggggac ctcgatgcct tcctccaagg ccttggcggc gacccgctcc atggccccgg
      901 gcagccacat ggggaggctg acgtacccca tttcccgccc gatccgcatc atttcgcgaa
      961 gggacagcaa ggcggccgat tcgttcccct cgtggaggta ataataggcc tgcgtcaaga
     1021 gacaggaaaa atgggcaagc tcgttccggc tctgcgcccc cacttcgcat gcctcggata
     1081 gatgcccggc cgccttgccg tcttcccccg ccgcgtggaa aaggttgctc ctctgcaaga
     1141 gggccaggtg gagggtccag ggattcccca tctcccggca gaggttcagg ccttgatccg
     1201 agtgatgggc ggcccgtgca gaatccccac gaagcagggc gtcccaggcc gcggcgtaat
     1261 ggtagaagct cgcctcccac ggcttggcca gcggcaggga ggacgccatg gtcccgagat
     1321 atcctttcgc cgtcacgaag tcgccggatt tgagggagca gagcactccc tggcccatca
     1381 gcatgtaatc catgacgtga accccggtgg tctccgccag cccgagcccc tcccgcacgg
     1441 cgcggatgca gcggtcgcat cgggagacga ggttggcgtg cgccgcttcc acccagttca
     1501 cggttaacag ggccaggggt gagacgtccg ggcgccggat cacctccccc aacgagtcga
     1561 gaagaatccc cagtttccgc agttcccccc cgccgtagcg gtaggaagcg aggtgaatga
     1621 gggcctcgat ccgggtgggg atgtccttgc ctgcccggga cagctccagg gcgcggtcgg
     1681 cccacccctc catcgcggaa tagagcggcc ggcgaagcgc cagggcgcgg accatgctgc
     1741 atgtgacccg cgcgccgacc tcctcggacg ggaaatcccc gaactcgctc atcagcccgt
     1801 cgaggagcga gaaccagcgg tcgagcggct tcagcccttc cgctccgtag atgatggatt
     1861 ccacgatccc ggaccaggcg agaaagacgc cggggacatc ccgaagcccg tggaactgcc
     1921 ggaaggcgct ttcgaaggac cggcggctct ccgcgggatc gaatgggagg cggcatgctc
     1981 cgtcccagta acggagccag gggtcctgat cgacgctcgt cttcgggagg gagtc
//
LOCUS       DATGYW010000365         1533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_129611, whole genome shotgun sequence.
ACCESSION   DATGYW010000365 DATGYW010000000
VERSION     DATGYW010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129611"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1019
                     /locus_tag="VK429_05050"
     CDS             <1..1019
                     /locus_tag="VK429_05050"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HLN91208.1"
                     /translation="ESVRTKNIYAQMTWETLERLLLQRTEGDYIAKDHSHLLDRLSSR
                     DATTGATAEGSRTADPAVVAEFDEENLHLKGSGVLLELLAEEEVEGDFLELLEEIRKI
                     IPNLISRRELPLLKTMLSTLESVRRTAPESRKTPIGTVIGEVDFAHMIDLFLSPAVSK
                     PEKERIEGILVSFAGVSIGDFLDRLLMETNQGNRKALFSLAVRFNAEALPAIVKKLDD
                     PHWYFVRNLCAILGKIGDPSVVPDLVRLLDRQDLRVRKEAILALGQIGAPESVPFLGK
                     ILLNDTFLQSAREEAIRIDAANAIFRCGSTRGIALLHRGTECKRAKVRDHCAGLLATL
                     GMKK"
     gene            1016..>1533
                     /locus_tag="VK429_05055"
     CDS             1016..>1533
                     /locus_tag="VK429_05055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91209.1"
                     /translation="MKKDALFLLVSELAMAIQAASAYPENHPRVQDLLVRLHRRVQSE
                     ASLLHGLNIGFFRDHVVVDEFPFVEPNPTLTRLIERMREKGIEKILISEGITFGELKR
                     FVYFLAAGTGPAFGQIWESIVYGKIEGADSSRAASLGLAPASRPTGFMAGASDVLKNV
                     LASMVAERKKSGV"
BASE COUNT          292 a          500 c          477 g          264 t
ORIGIN      
        1 gcgagagcgt ccgcacgaag aacatctacg cccagatgac gtgggaaacc ctcgagcggc
       61 tgctgttgca gcggaccgaa ggggactaca tcgcgaagga ccactcccac ctcctggaca
      121 ggctgtcgag ccgcgatgcg acgacgggcg cgacggccga aggaagtcga accgcggacc
      181 ctgccgtcgt ggcggaattc gacgaggaga accttcacct gaagggatcc ggcgttctgc
      241 tggaactgct cgcggaagag gaggtcgagg gagatttcct ggaactgctc gaggagatcc
      301 gcaagatcat cccgaacctg atctcccgga gagagcttcc cctcctgaag accatgctct
      361 ccaccctgga gtcggtacgc cggaccgccc cggagagcag gaagactccg atcgggacgg
      421 tgatcggcga ggtggatttc gcccacatga tcgacctctt cctttccccc gccgtttcga
      481 agccggaaaa ggagcggatc gaggggatcc tcgtctcttt cgccggggtg tcgatcggcg
      541 acttcctcga ccggctgctg atggaaacga accaggggaa ccggaaagcg ctcttttccc
      601 tcgccgttcg gttcaacgcg gaagccctcc ccgcgatcgt gaaaaagctc gacgacccgc
      661 actggtattt cgtgcggaac ctgtgcgcca tcctcgggaa aatcggcgac ccttccgtcg
      721 ttcccgacct ggtccggctt ctcgaccgcc aggacctccg tgtcaggaag gaggccatcc
      781 tcgccctcgg gcagatcggg gcccccgagt cggtcccctt tctcgggaag atcctcctca
      841 acgatacgtt cctgcaatcg gcccgggagg aggcgatccg gatcgacgcc gctaacgcca
      901 tcttccggtg cggcagcaca agggggatcg ccctcctcca ccgcggaacg gagtgcaaac
      961 gggcgaaggt ccgggaccat tgcgcgggcc tcctcgccac gctcgggatg aaaaaatgaa
     1021 gaaagatgcg ctcttcctgc tcgtatccga actcgcgatg gcgatacagg ccgcgtcggc
     1081 ttaccccgaa aaccacccgc gcgtccagga cctcctggtg cgcctgcacc gccgcgtcca
     1141 gtccgaggct tcgctgctgc acggactgaa catcggtttc ttccgcgacc acgtcgtggt
     1201 ggacgagttc ccgttcgtgg aaccgaaccc cacgctcacc cgtctgatcg aacggatgcg
     1261 ggaaaaaggg atcgagaaga tcctgatctc cgaggggatc accttcgggg agttgaagcg
     1321 gttcgtctac ttcctcgcgg cgggaaccgg ccctgccttc ggacagatct gggaatcgat
     1381 cgtctacggg aaaatcgaag gggccgattc gtcccgcgcc gcctcgctcg ggctggctcc
     1441 cgcgtcccgc ccgaccggtt tcatggccgg cgcgtcggac gttctgaaga acgtcctcgc
     1501 gtcgatggtc gctgaacgga aaaagtccgg ggt
//
LOCUS       DATGYW010000366         1980 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_460733, whole genome shotgun sequence.
ACCESSION   DATGYW010000366 DATGYW010000000
VERSION     DATGYW010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_460733"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1722
                     /locus_tag="VK429_05060"
     CDS             <1..1722
                     /locus_tag="VK429_05060"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLN91210.1"
                     /translation="AAPLWVALIATVIETGLLRRIYAQEEIYQLLLTYALVLIIDDLA
                     KIVFGPEFKSIPKPEMLSGSVNIFGGTVPVYTLLVVVLAPAVALLLWYLLYKTKTGKV
                     VRATSSDREMADALGINMSALFTLVFAFGAVLAGLGGALAGPVRTVFPGVGTEVIIES
                     FVVVVIGGLGNLWGALIGSILIGSLETIGIIVFPEFEMSLIFVLMVAVLVVRPWGLFG
                     RPLKVKALSEKNLAMEAQEISPVHFSVHPVVRWAPFLLLLLVPLFAGRFYQYLLTQIF
                     IASLMAIAFNLLLGTTGLLSFGQAAFFGVGAYTVGLLLTKGGFGTLPALLLAPVVTAV
                     AAGVIGFFCVRLSGVHFAMLTLAFGQLIFTVVYKWYGLTGGDNGIQGIPVKPIPLGGL
                     GSLDLGSNQAMYYFVLAVVGLAVELLRRFRSSPFGATLKAIRENGQRASFLGVNIHLY
                     QWSAFVVAGAFTGLAGGLFAMMEKAISPEIIHWSKSAEPVFMTIIGGIYTFAGPAVGA
                     VVYVILNSYLVAWTEKWALVLGLVLLTLVLLLPGGVVGFVNEKGRQTFGKLRCIRKWF
                     FSKSATS"
     gene            1680..>1980
                     /locus_tag="VK429_05065"
     CDS             1680..>1980
                     /locus_tag="VK429_05065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011196318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91211.1"
                     /translation="MHPQMVLLEVRNVVKSFGGLRALQDVSLSVPRGEIRAVIGPNGA
                     GKSTFFNVMTGLLKPDSGGVLFEGEPITGMPPHRIIRKGIGRSFQITNIFPRMSVF"
BASE COUNT          275 a          643 c          648 g          414 t
ORIGIN      
        1 gcggcgcctc tgtgggtcgc gctgatcgcc accgtgatcg agacgggact gttgcgccgc
       61 atctacgcgc aggaggagat ctaccagctc ctgttgacct acgcactcgt gctcatcatc
      121 gacgacctgg ccaagatcgt cttcggtccg gagttcaagt cgatccccaa gcccgagatg
      181 ctgtccgggt cggtcaacat cttcggcggg accgtcccgg tgtacaccct cctcgtcgtg
      241 gtcctggcgc cggccgtggc gctgctgctc tggtacctcc tttacaaaac gaagacgggg
      301 aaagtcgtcc gggcgacctc ctccgacagg gagatggcgg acgccctcgg gatcaacatg
      361 tcggcgctgt tcacgctggt cttcgcgttc ggcgctgtcc ttgcggggct tggcggcgcg
      421 ctggcggggc cggtgcggac cgtattcccc ggggtgggga ccgaggtcat catcgaatcg
      481 ttcgtcgtcg ttgtgatcgg gggccttggg aacctgtggg gcgccctcat cggttcgatc
      541 ctcatcggtt ccctggagac gatcgggatc atcgtgttcc ccgaattcga gatgtccctc
      601 atcttcgtgc tgatggtggc cgtgctcgtg gtccggccgt gggggctgtt cgggcgtccg
      661 ctcaaggtga aggcgctctc ggagaagaac ctcgcgatgg aggcgcagga gatctcgccg
      721 gtccacttct ccgtccaccc ggtcgtgcgg tgggcgccgt ttctcctgct gctcctggtc
      781 cccctgttcg ccggccggtt ctaccagtac ctgctgacgc agatcttcat cgcctccctg
      841 atggccatcg ccttcaacct cctcctgggg acgacggggc tgctctcgtt cgggcaggcc
      901 gcgttcttcg gggtcggtgc ctacacggtg gggctcctcc tcaccaaagg cgggttcggg
      961 acgctgcccg ccctgctcct ggcgccggtc gtgacggcgg tggcggccgg tgtcatcggg
     1021 tttttctgcg ttcgcctctc gggggtgcac ttcgccatgc tcaccctggc gttcggccag
     1081 ctcatcttca cggtcgtcta caaatggtac ggtctgaccg gcggcgacaa cgggatccag
     1141 gggatcccgg tgaagccgat cccgctcggt ggcctgggct ccctcgacct cggctccaac
     1201 caggcgatgt actacttcgt gctcgcggtc gtcgggctgg ccgtcgagct gctccgccgg
     1261 ttccgctcct cgccgttcgg cgcgacgctc aaggcgatcc gcgagaacgg ccagcgggcc
     1321 tccttcctcg gagtgaacat ccatttgtac cagtggtcgg cgttcgtggt cgcgggcgcg
     1381 ttcacggggc tggcaggcgg gctcttcgcc atgatggaga aggcgatctc ccccgagatc
     1441 atccactgga gcaagtccgc cgaaccggtg ttcatgacca tcatcggcgg aatctacacc
     1501 tttgcgggcc ccgcggtggg ggcggtcgtc tacgtcatcc tcaactcgta ccttgtcgcc
     1561 tggacggaaa aatgggcgct ggtgctcggc ctggtcctgc tgacactcgt gctgctcctc
     1621 ccgggaggcg tggtgggatt cgtgaacgaa aaggggcgtc aaaccttcgg aaaactcagg
     1681 tgcatccgca aatggttctt ctcgaagtcc gcaacgtcgt aaagtcgttc gggggcctgc
     1741 gggcgctcca ggacgtctcc ctatccgtgc cgaggggcga gatccgcgcc gtcatcgggc
     1801 cgaacggggc gggcaagtcg acgtttttca acgtcatgac ggggctgctc aagccagact
     1861 ccggcggcgt cctgttcgaa ggggaaccga tcacgggaat gcccccccac cggatcatcc
     1921 ggaaggggat cggccgctcc ttccagatca cgaacatctt tccccggatg tcggtcttcg
//
LOCUS       DATGYW010000367         1797 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_343519, whole genome shotgun sequence.
ACCESSION   DATGYW010000367 DATGYW010000000
VERSION     DATGYW010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_343519"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..651)
                     /locus_tag="VK429_05070"
     CDS             complement(<1..651)
                     /locus_tag="VK429_05070"
                     /inference="COORDINATES: protein motif:HMM:NF024891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLN91212.1"
                     /translation="MKLYIASTSEYAGKTLLALALGTIWREAGVKVGYVKPLGKIPVV
                     REGRLVDGDATFLADALALDAPPEAVCPVVITQDLVMAAWRGEELRLRGRISAAVRDA
                     EARSEVLLVGGTANLRDGIFLGLSPLEFIANYDCRVVLLDRFEGEKSMDQVLSAADAL
                     GPRFLGVVFNRVQPAQEKFVRETVIPFFGGRGVRVLGAVPTDPVLGSVSVQALADSL"
     gene            complement(648..>1797)
                     /locus_tag="VK429_05075"
     CDS             complement(648..>1797)
                     /locus_tag="VK429_05075"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HLN91213.1"
                     /translation="GIPLAGVSVALRERILPALPPTASLANPVDIIGDARADRYRNVL
                     SALRDEPSVDAVLVLLTPQAMTEPEETARATVSAFAGSGKTVFASFLGEATVVSSRRI
                     LSDGGVPNYPVPERAVRTLSAMLRYSRIRSAGAPGEEEAPSTRPENAERLVGDALAAG
                     RRALGEEESRGILEAYGFTFPLHAFAGTSDAAVAAFREMGCASAAMKIVSPQILHKTD
                     VGGVRLGLRGAEDVARAFMEITSSVRRLAPSAWIAGVSIQEMVTGGRELIVGMSRDPQ
                     FGPLLMFGLGGIYVEVLKDVSFRVAPVSRRDAEEMVREIRAWPLLAAYRGSEPADEDA
                     IVEALIRVSRLSCDFPEIQELDINPLLVLPKGKGIRAIDCRMTIAEAP"
BASE COUNT          291 a          665 c          585 g          256 t
ORIGIN      
        1 gagggagtcc gccagggcct ggacgctcac gctcccgagc acggggtccg tggggacggc
       61 tcccagcacg cgcactccac gccccccgaa gaacgggatc accgtttccc gtacgaattt
      121 ttcctgggcc ggctggacac ggttgaagac cacgccgagg aacctcggtc ccagggcatc
      181 ggccgccgac aggacctggt ccatcgattt ctccccctcg aaccggtcca ggagcacgac
      241 gcggcagtcg tagttcgcga tgaactccag cggggagagc ccgaggaaga tgccgtcccg
      301 gaggttcgcg gtccccccga cgaggagcac ctcggaccgc gcctcggcgt cgcgcacggc
      361 ggcggagatc ctcccccgca ggcgcagctc ctcgccgcgc caggcggcca tcaccaggtc
      421 ctgggtgatc acgaccgggc agaccgcctc cggcggcgcg tccagggcca gcgcgtccgc
      481 caggaacgtc gcgtccccgt ccaccagtcg tccctcccga accaccggga tcttcccaag
      541 gggcttgacg taccccacct tcaccccggc ttccctccag atcgtcccca gtgcgagcgc
      601 caggagggtc ttccctgcgt actccgacgt cgacgcgatg tacagcttca tggagcctcc
      661 gcgatggtca tccggcaatc gatcgcgcgg atgcctttcc ctttcggcag gaccagcaac
      721 gggttgatgt cgagttcctg gatctccgga aagtcgcacg acaagcgcga tacccggatc
      781 aacgcctcca cgatcgcatc ctcgtccgcg ggctcgctcc cccggtacgc ggccagcagc
      841 ggccaggcgc ggatctcccg gaccatctcc tcggcgtcgc gccgtgaaac gggggccacc
      901 cggaaggaga cgtccttcag cacttccaca tagatccctc ccaggccgaa catcaggagc
      961 ggaccgaact ggggatcgcg gctcatcccg acgatgagtt ccctgccgcc ggtgaccatc
     1021 tcctggatcg acacgccggc gatccaggcc gacggggcca gccggcggac ggacgaagtg
     1081 atctccatga atgcccgggc cacgtcttcc gcgccgcgaa ggccgagtcg cacgcctccg
     1141 acatccgtct tgtgcaggat ctgcggcgag acgattttca tcgccgcgga cgcgcacccc
     1201 atctcccgga acgccgcgac ggccgcgtcg ctcgtcccgg cgaaggcgtg gagcgggaac
     1261 gtgaaaccgt acgcctcgag gattccgcgg gactcctcct ccccgagcgc tctccgtccc
     1321 gcggcaaggg catcgcccac gaggcgctcc gcgttctccg ggcgggtcga cggagcctcc
     1381 tcctcccccg gggcgcccgc cgaccggatt cgggagtacc ggagcatcgc ggaaagggtc
     1441 cgcacggccc gctcgggaac cggatagttg gggacgccgc cgtcgcttaa gatccggcgc
     1501 gacgagacca ccgtggcttc cccgaggaag gaggcgaaca cggtcttgcc ggagccggcg
     1561 aaggcggaaa cggtcgctct cgcggtttcc tccggttccg tcatcgcctg cggcgtcagc
     1621 aggacgagga cggcgtcgac cgacggctcg tcccggagcg ccgagaggac gttcctgtac
     1681 cggtccgcgc gggcgtcccc gatgatgtcc accgggttcg ccaggctcgc cgtaggcggc
     1741 agcgcgggaa ggatcctctc ccggagtgca acggagaccc cggcgagggg aatgccg
//
LOCUS       DATGYW010000368         1503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_301400, whole genome shotgun sequence.
ACCESSION   DATGYW010000368 DATGYW010000000
VERSION     DATGYW010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_301400"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="VK429_05080"
     CDS             complement(<1..300)
                     /locus_tag="VK429_05080"
                     /inference="COORDINATES: protein motif:HMM:NF039473.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6502 family protein"
                     /protein_id="HLN91214.1"
                     /translation="MEENITKAIAAAITKLLRPLVMFLLRNGVPYQTFADIAKRVYVD
                     LATEKFDIPGRKPSKSRVAILTGLSRREVLRVKRLPAQDDLGAMDRINRAARVITG"
     gene            complement(495..>1503)
                     /locus_tag="VK429_05085"
     CDS             complement(495..>1503)
                     /locus_tag="VK429_05085"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HLN91215.1"
                     /translation="YLEELGRIRTFFFDKTGTLTLGKPEVVVVHPFHGRSEQEVLRLA
                     AAVESRSGHPLAKAILDFARNRGIKPPAVTDVQAVPGMGIRGRVNGEICLVGNPSFFN
                     GTSGIAGPDLDAVKEWEGRGATVVVVGTEEEAFGMIAIQDSIRKDTADALKELRNLGA
                     TELAMLTGDNPETGKAVASLLPMDAVHAGLLPEQKIALVREAVGKGEKVAMVGDGIND
                     APALAQATVGIVMGAAGTDVALEAGDVVLLGDDLRKIPFAVRLGRRTLRIIRFNVVFS
                     LASKVVFLVLAPLGLVTLWMGVAADMGVSLLVVGNSMRLLSGSYGSGTKHGEVVTTRN
                     G"
BASE COUNT          303 a          470 c          421 g          309 t
ORIGIN      
        1 gcccgtgatg acacgcgccg cccggttgat ccgatccata gccccgagat cgtcctgggc
       61 cggaagccgc ttcacgcgca acacctctct ccgggaaagg ccggtgagga tggctacccg
      121 cgatttggat ggtttccgtc ccgggatatc gaatttctcg gtggccaggt ccacgtagac
      181 acgcttcgcg atatcggcga aggtctggta ggggacgccg ttccgcagga ggaacattac
      241 cagggggcga agcaatttcg tgatggctgc ggcaatggct tttgtgatgt tctcttccat
      301 gtttgggacc atagtcccaa atacatactg atgtcaataa ttattttttt tagcagtagt
      361 tacgggatgg agatgcacgg ggacattttc acgaaaatag aactcggcga aaacctttat
      421 tctcttttgt tattgatacg ttaccgaagt ccctacgaga aggtattcgc atcctgctcc
      481 tacgaccgct tggactaccc atttcgggta gtgacaacct ccccatgttt cgtcccggag
      541 ccgtacgatc ccgaaaggag ccgcatactg tttccaacaa caaggagcga cactcccatg
      601 tcagcagcaa cacccatcca aagggtgact agccccaagg gggcgagaac gagaaagacc
      661 accttggacg ccagggaaaa gacgacgttg aaccggatga tccggagcgt cctgcgcccc
      721 aggcggacgg cgaagggaat cttgcgcagg tcatccccca agaggacgac atctcccgcc
      781 tccagcgcca catcggtccc ggccgccccc atgacgatcc ccacggtggc ttgggccagg
      841 gccggagcat cgttgatccc gtcgcccacc atagcgacct tctccccttt ccccacggcc
      901 tcccggacga gcgcgatctt ttgctccgga aggagccccg catgcaccgc atccatggga
      961 agcagggagg cgacggcctt tccggtctcg gggttgtctc cggtcagcat cgcgagttcg
     1021 gtcgccccga gattgcgcaa ctctttgagg gcgtccgcgg tatcctttcg aatcgaatcc
     1081 tggatggcga tcatcccgaa cgcttcttct tcggttccga cgacgaccac ggtggctcct
     1141 cttccctccc actccttcac cgcatccagg tccggaccgg cgatccccga ggttccgttg
     1201 aaaaaggaag ggttgcccac aaggcatatt tccccgttga cccgtcccct gattcccatg
     1261 ccgggcacgg cctgcacatc tgtaaccgcc ggcggcttga tccctctgtt tctcgcaaaa
     1321 tccagaatgg ctttggcgag tgggtgcccg gaccgggatt cgaccgccgc ggccaggcga
     1381 aggacctcct gctccgatcg gccatggaag gggtggacga caacgacttc gggcttgcca
     1441 agggtcagag tcccggtctt gtcgaaaaag aaggtgcgga tccgtcccaa ctcctcgagg
     1501 tat
//
LOCUS       DATGYW010000369         2145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_407729, whole genome shotgun sequence.
ACCESSION   DATGYW010000369 DATGYW010000000
VERSION     DATGYW010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407729"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..712
                     /locus_tag="VK429_05090"
     CDS             <1..712
                     /locus_tag="VK429_05090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91216.1"
                     /translation="ASRGKTPIVVELAKEGIPIPETARCVRMQECSVCGTVKRHFFNR
                     VAAEGKFTVVATGHNLDDETARLLGNLLHWQRDHLARQHPLLPGADGGLVRKVKPLWR
                     VSEVETAAYGFLKGIDYVTEECPMSEDATSLVYKEALSRIEDRMPGTRIVFYKGFLDP
                     SNPLRKGPEGEAAPVQEDAPEENTVRGTETDSEVGGGAPRACASCGAPTYTETCSFCR
                     MKERVRKARSQRAARVSR"
     gene            709..1509
                     /locus_tag="VK429_05095"
     CDS             709..1509
                     /locus_tag="VK429_05095"
                     /inference="COORDINATES: protein motif:HMM:NF020287.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenine-N1)-methyltransferase"
                     /protein_id="HLN91217.1"
                     /translation="MTEGKRVRRGPFRAGEDILLISPKGEEHLVTLAPGKAFGTHKGN
                     LPHDDLIGKEDGGRAWTAMGSAYRAFRPTYMQFIMNQKRHAQIIYPKDTGTILMWADI
                     FPGATVVEAGIGWGALTIKLLEAVGPTGKVVSYEIREDFAESGAGTVRRYLGACENHE
                     VKVRDIYLGIDEREVDRIVLDLPEPWQAVPHAREALAPGGIVLSYLPSTIQVKQLCDR
                     YAEEGGFMDPETFEVILRPWHVKGNSVRPVQWMFSHSAFLVVTRKITT"
     gene            complement(1529..>2145)
                     /locus_tag="VK429_05100"
     CDS             complement(1529..>2145)
                     /locus_tag="VK429_05100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011957116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLN91218.1"
                     /translation="VRRVVFAASSSAYGDTPQLPKRESMTPNPLSPYAAQKLAGEHYL
                     RIFYEIYGLETVSLRYFNVFGPRQDPKSTYAAVIPRFITTVLRGVPPTVYGDGLQTRD
                     FTYIDNVIHANLAACAAPKAACGKVVNIACGDRVSLLDILEIVYGLAGKRVAPDFEPG
                     RAGDVRDSLADISLARDLIGYDPKVPFSEGLAKTFDWFRGSAGS"
BASE COUNT          372 a          655 c          802 g          316 t
ORIGIN      
        1 ggcgtcgcgc ggaaagacgc cgatcgtcgt cgagctcgcg aaggagggga tcccgatccc
       61 cgagacggcc cgctgcgtgc ggatgcagga gtgctcggtc tgcggcacgg tgaagcggca
      121 cttcttcaac cgcgtcgccg ccgaaggaaa gttcaccgtg gttgcgacgg ggcacaatct
      181 cgatgacgag acggcccggc tgctcgggaa cctgctccat tggcagcggg accacctggc
      241 gcggcagcat ccgttgctgc ccggggcgga cggagggctc gtgcgcaagg tgaagccact
      301 ctggcgcgtg agcgaggtcg aaaccgcggc gtacgggttc ctgaagggga tcgactacgt
      361 gaccgaggag tgcccgatga gcgaggacgc gacgtccctc gtgtacaagg aggcgctgtc
      421 gcgcatcgag gaccggatgc cggggacgcg gatcgtcttc tacaaggggt tcctcgaccc
      481 gtcgaacccg ctgcggaaag ggccggaagg cgaggccgca cccgtgcagg aagatgcgcc
      541 ggaggagaat accgtgcgcg ggacggaaac agattcggaa gtgggagggg gtgctccgcg
      601 ggcgtgcgcg tcgtgcggcg ccccgacgta cacggagacg tgttccttct gccggatgaa
      661 ggagcgcgtg cggaaagcgc gctcgcagcg cgcggcgaga gtttcccgat gacggagggg
      721 aagcgcgttc gccgcgggcc gttccgggcg ggagaggaca tcctcctgat ctccccgaag
      781 ggggaggagc acctcgtcac gctcgctccg gggaaggcgt tcggcacgca caaggggaat
      841 ctgccgcacg acgacctgat cggcaaggag gacggcggcc gcgcgtggac cgcgatgggg
      901 agcgcgtacc gcgccttccg gcccacttac atgcagttca tcatgaacca gaagcggcac
      961 gcgcagatca tctacccgaa ggacacgggg acgatcctga tgtgggccga catcttcccc
     1021 ggggccacgg tggtcgaggc ggggatcggg tggggggcgc tcaccatcaa gctgctcgag
     1081 gcggtcggcc cgacgggaaa ggtggtctcg tacgagatcc gggaggattt cgcggagagc
     1141 ggcgcgggca cggttcggcg ctacctcggc gcgtgcgaaa accacgaggt gaaggtgcgg
     1201 gacatctacc tcgggatcga cgagcgggag gtggaccgga tcgtcctcga cctgcccgag
     1261 ccgtggcagg ccgtccctca cgcgcgggag gcgctcgccc cgggggggat cgtgctttcc
     1321 tacctcccct ccacgatcca ggtgaagcag ctgtgcgacc ggtacgcgga ggaagggggc
     1381 ttcatggatc cggagacgtt cgaggtgatc ctgcgcccct ggcacgtgaa ggggaactcc
     1441 gtccgccccg tccagtggat gttctcccac tccgccttcc tggtcgtgac gcggaagatc
     1501 accacctgag cccctcgcgg ggccggcttc aggatcctgc gctcccgcgg aaccagtcga
     1561 acgtcttcgc gagaccctcg gagaagggaa ccttcgggtc gtagccgatc agatcccggg
     1621 cgagggagat gtcggccagc gagtcgcgca cgtcccccgc gcgtcccggt tcgaagtccg
     1681 gcgcgacgcg cttccccgcc agcccataga cgatctcgag gatatcgagg agcgacaccc
     1741 ggtccccgca ggcgatgttg acgacctttc cgcacgcggc cttcggagcg gcgcaggcgg
     1801 ccaggttggc atggatcacg ttgtcgatgt aggtgaagtc gcgcgtctgg aggccgtcgc
     1861 cgtagacggt gggggggact ccccgaagca ccgtggtgat gaaccggggg atgacggcgg
     1921 cgtacgtcga cttcgggtcc tgccgcgggc cgaacacgtt gaagtagcgc agggaaacgg
     1981 tttcgagccc gtagatctcg tagaagatgc gcaggtaatg ctcccccgcc agtttctggg
     2041 ccgcataggg ggacaacggg ttgggggtca tcgactcccg cttgggaagc tggggggtgt
     2101 ctccgtaggc ggaagaggag gcggcgaaga ccacgcgccg cacgc
//
LOCUS       DATGYW010000370         1543 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_407805, whole genome shotgun sequence.
ACCESSION   DATGYW010000370 DATGYW010000000
VERSION     DATGYW010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407805"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1543
                     /locus_tag="VK429_05105"
     CDS             <1..>1543
                     /locus_tag="VK429_05105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012409569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HLN91219.1"
                     /translation="SHHVLGYRVTNSDPEGRYSIAKVILSDPHLPCLLVNTTISGDAS
                     FLKRVRLYALCAPHLGMGGWGNNGRVVEIAGRKILTAEKDGVWLALAATVPYARLSCG
                     YVGRSDGWTDLASDYRMEWEFDRATDGNIALTGELDLGDRREFTMGLAFGDGLHNAAT
                     TLLESLATPFAEHRERYADQWNRSCRRILPLEKSASDGGDLYHGSYSLLLAHEDKTYP
                     GAFIASLSIPWGESKGDDDRGGYHLVWTRDMVSTATGLLAAGNTETPLRALIYLTVSQ
                     HEDGGFSQNFWIDGESYWRGIQLDEVAFPILLAWRLLREGNLGNFDPYPMVMGAARYL
                     ILHGPATQQERWEEAGGYSPSTIASNIAALVCAASFARERGDGATAAFLEEYADFLEC
                     HVEAWMVTTEGTLVPGIPRHYIRILPADVNDPFPAEDPNLGVVVLNNRPPGSRWRFPA
                     KEIVDGGFLELVRYGIRQADDPVIVDSLRVLDAVLKVDTPNGPCWRRYNHDGYGQRAD
                     GGPFIG"
BASE COUNT          272 a          504 c          505 g          262 t
ORIGIN      
        1 tcccatcacg ttcttgggta tagggtcacg aactccgacc cggaggggcg ctactccatc
       61 gcaaaggtga tcctctccga tcctcacctg ccgtgcctcc tcgtgaacac gaccatctcg
      121 ggggatgcat cgttcctgaa aagagtccgg ctttatgcat tgtgcgctcc ccacctcggc
      181 atggggggat ggggaaacaa cggccgcgtc gtggagatcg cgggcaggaa aatcctgacc
      241 gcagagaagg acggggtctg gctcgcgctg gccgccaccg tcccctacgc gcgcctctcc
      301 tgcggctacg tgggccgaag cgacggctgg acggacctcg cctccgatta ccggatggag
      361 tgggagttcg accgcgccac ggatggaaac atcgccctca ccggcgagct cgaccttggg
      421 gaccgccggg agttcacgat ggggcttgcc ttcggcgatg gcctccacaa tgcggcgaca
      481 acgcttctgg aatccctcgc gacacccttc gccgagcatc gggagcgata cgcggaccag
      541 tggaaccggt cgtgccggcg tatcctcccg ctcgaaaaat cggcgagcga cggcggagac
      601 ctgtaccacg ggagctacag ccttcttctc gcccacgaag acaagacgta tcccggagcc
      661 ttcatcgcct cgctgtcgat cccgtggggg gagtcgaagg gtgatgacga ccgcggggga
      721 tatcacctcg tatggacgag ggatatggtc agcacggcga cgggtctcct cgccgcgggg
      781 aacaccgaga cgccgttacg tgccctgatc tacctgacgg tcagccagca cgaggacggc
      841 ggattttccc agaacttctg gatcgacggc gagtcgtact ggcgtgggat ccagctcgac
      901 gaggtcgcgt tccccatcct cctggcgtgg cgcctgctgc gcgagggaaa tctcgggaac
      961 ttcgacccct atccgatggt catgggggcg gcaaggtacc tgatcctcca cggtccggcg
     1021 acacagcagg agcggtggga ggaggccggc ggctactctc cgtcgaccat cgcctccaac
     1081 atcgcggcgc tcgtctgcgc ggcctccttc gcccgcgaaa ggggagacgg ggcgacggcc
     1141 gcattcctcg aagagtacgc cgacttcctc gaatgccacg tcgaagcctg gatggtgacc
     1201 acggagggga cgctcgtccc cgggataccg aggcattaca tccgcatcct ccccgcggac
     1261 gtgaacgacc cgttccctgc cgaggacccc aacctcggcg tcgttgtgtt gaacaaccgt
     1321 cccccgggtt cccgctggcg gtttcccgcg aaggagatcg tcgacggggg gttcctcgag
     1381 cttgtccggt acgggatccg acaggcggac gatcccgtca tcgtggactc cctgcgcgtg
     1441 ctggatgccg tgctcaaagt ggataccccg aacggcccgt gctggcggcg gtacaaccac
     1501 gacgggtacg ggcagagagc ggatggcggg ccattcatcg ggt
//
LOCUS       DATGYW010000371         7061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_500166, whole genome shotgun sequence.
ACCESSION   DATGYW010000371 DATGYW010000000
VERSION     DATGYW010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 7061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7061
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_500166"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VK429_05110"
     CDS             <1..304
                     /locus_tag="VK429_05110"
                     /inference="COORDINATES: protein motif:HMM:NF014950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLN91220.1"
                     /translation="MANDWPGNARELRNVIERAVVVAKGNIVTESDISLPPTPSDANH
                     RTKSLEEIEKAHIEVVLNENQWNIVRSAHALGIDRVTLYNKIKKFGLKKEGVASKE"
     gene            709..1419
                     /locus_tag="VK429_05115"
     CDS             709..1419
                     /locus_tag="VK429_05115"
                     /inference="COORDINATES: protein motif:HMM:NF013743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein H"
                     /protein_id="HLN91221.1"
                     /translation="MKEKRFPFLETKTVMFCKAFPSKMIPVDKMSSSEGLCNTCHYEE
                     CPLYSEVSGVEKGMENVRGFRLHSDYYYHPKHLWVAPAPGEEGEARVGIDDFAARLIG
                     RVDRASVPAVGVPVKENSVCFLLHSGQRTVRLVSPADGVVKAVNPKVAADPSLLNDDP
                     YSEGWIFSMRLKGDAVKGLYHETVARTWYESEVERLQRVFSSDLGMMATDGGEAHKDI
                     SSRLNDAQWGKIVSQFLG"
     gene            1436..2098
                     /locus_tag="VK429_05120"
     CDS             1436..2098
                     /locus_tag="VK429_05120"
                     /inference="COORDINATES: protein motif:HMM:NF013743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91222.1"
                     /translation="MVVLLVLLTVLGCIGVNMALRRKEKAVSVREPSALFPSLTAQEL
                     PGGLFVHSGHTWAKLDAAGAVQVGLDGFAQGILGRVDRFELPPDGATLRQGEPAFAAL
                     QGGKRIGFVSPVDGVVCAVNERINVDPAAARKEPYEKGWAFMIRPTNLSQNLKKLRIG
                     AEAAAWLEREVRSFTEFLSLHRAVPVEVGATLPDGGIHIEGIMETMDGEILQIAIRKY
                     FR"
     gene            2125..3042
                     /locus_tag="VK429_05125"
     CDS             2125..3042
                     /locus_tag="VK429_05125"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HLN91223.1"
                     /translation="MSISRRNFLKVAGTAGGVLLAGGAASAQMARAPETSAGNVEFNG
                     MLIDTTKCIGCRACEEACNEANHLPKPKVSFSTESVFEETRDTTTGAYTVVNRFPNEK
                     KPDEPIFVRKQCMHCNQPACASACLTRAMEKTKEAAVIYHKDRCMGCRYCMVACPFDI
                     PRFEYNSPTPFVWKCIFCNERQKKGEPPACSEVCPTGATLFGKKRDLLEIAKTRIYNE
                     PNRYVHKIYGEHEVGGTGWLYLTGAPEEKLGLKTDLPTTPYPELTSGFLYGVPLVFVL
                     WPSLLIGLNYLIKDSKVSEKKEASHDEQD"
     gene            3026..4327
                     /gene="nrfD"
                     /locus_tag="VK429_05130"
     CDS             3026..4327
                     /gene="nrfD"
                     /locus_tag="VK429_05130"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HLN91224.1"
                     /translation="MTNRTDASAASAEGTMTFRQLARETIRFVLSEMKPKGKLLTPFN
                     VITGVIILSGLVMIAVRFAYGLGAVSNLSQNYPWGLWIGFDVITGVAFAGGAYVLCFV
                     VHILKIKKFEPILRVTVLNGFLAYVFYAGALLLDLGRPWNVINPIIGNAFGLSSVLFL
                     VAWHFLLYMICEFLEFSPVVAQWLNWPRARRILEGLTTGAVIFGITLSTLHQSGLGAL
                     FLLAPTKVHPLWYSGNIPVMFFVSSIFAGLSMVMIESFFTQKAFKDRIGHDLHAAHDS
                     ILLGLGKGAVGALFAYIFLKLVDFVHYKQWVHLATPMGYWYLFEIVGFVLLPTALFLQ
                     AVRTRNARLVQFTAFLTAAGVILNRLNVSVIGFKWYETVRYYPSWMEIWITLAIISME
                     LWVFRWVILRMPVFSEEHIAAEEKTAEVGEDAEVVTWRTPE"
     gene            complement(4404..5096)
                     /locus_tag="VK429_05135"
     CDS             complement(4404..5096)
                     /locus_tag="VK429_05135"
                     /inference="COORDINATES: protein motif:HMM:NF013743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein H"
                     /protein_id="HLN91225.1"
                     /translation="MEGIRFIDIYATKGIEYLIVIAFFAAFVLFCRYMYRPGEVRAAA
                     TIAPENVTRFRVPEGLFYHQGHGWLRPEPGSIGVVGLDDFAQKFIGKIDAVDLPPVGS
                     RLAQGDKGWSLVVDGVPIPMLSPVGGEVVEVNPEVLRSPEILREDPYGKGWLLKVKST
                     RIASNTRNLLSGKLARAWMESALDKLHPLHGESLGPVLQDGGLMVDGIARVLGGDQWV
                     GLAKTHLMTDGE"
     gene            complement(5113..5772)
                     /locus_tag="VK429_05140"
     CDS             complement(5113..5772)
                     /locus_tag="VK429_05140"
                     /inference="COORDINATES: protein motif:HMM:NF013743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91226.1"
                     /translation="MVVLLVLITVLGCIGVSVALRRREEAAARQPAAGFPSLAAQELP
                     GGLFVHSGHTWAKLDPSGAVQVGLDGFARGILGRVDRFELPGDGATVRQGEPAFAALQ
                     SGKRIDFVSPIDGVVCAVNDRINVDPSSSRKEPYEKGWAFMIRPSNLSRNLAKLRIGA
                     EASAWMEREARSFAEFLTLHRAVPVEVGATLADGGVHVEGIMETMDGEILQIAIRKYF
                     R"
     gene            complement(5789..6499)
                     /locus_tag="VK429_05145"
     CDS             complement(5789..6499)
                     /locus_tag="VK429_05145"
                     /inference="COORDINATES: protein motif:HMM:NF013743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein H"
                     /protein_id="HLN91227.1"
                     /translation="MKETRCPFLETKTVMFCKAFPSKMIPVDRMSSSEGLCNTCNYEE
                     CPLYGEVSGAGKGMENVRGFRLHSDYYYHPKHLWVALSPGEEDEARVGIDDFSARLIG
                     RVDRASVPAVGASVKENSVCFLLHSGHRTVRMVAPADGVIKAVNPKVGADPSIVNDDP
                     YAEGWIFSMRLKGDAVKGLYHETVARKWYESEVERLQRVFSSDLGMLATDGGEALKDI
                     STRLNDAQWGKIVSQFLG"
BASE COUNT         1298 a         2314 c         2193 g         1256 t
ORIGIN      
        1 gatggccaac gactggccgg gaaacgcgcg ggagctccgg aacgtcatcg agagggcggt
       61 cgtcgtggcg aagggaaaca tcgtcaccga gtccgatatc agcctcccgc cgaccccttc
      121 cgacgcgaat caccggacga aatcgctgga ggagatcgag aaggcgcaca ttgaggtggt
      181 cctgaacgag aatcaatgga acatcgtgcg gtccgcccat gcgctcggga tcgaccgggt
      241 caccctctac aacaagatca agaaattcgg cctgaagaag gagggggtcg catcgaagga
      301 gtgatgaata aatcgatatg ctgttgaatt tcgcaactcc gtaaaccgcc ggaaattcaa
      361 catgtaatct ttccccctgc ctggaagtgt aaagaatctc tgcaattcgt ggttattcgg
      421 gcccttttcc cctcgagggt cgtccgtccg ttatcccatt gattaataag ctgttacgcg
      481 ccgagtgcgg gccggccgcc ggccctggca taaccattgc ggtagtgagg ggcgcgggga
      541 gtggctcctg cggagggagg tggggaagat ggggtacctg atgataggaa tcgcgttcat
      601 cgttctggcg gtcatctcgg cggtgaggac gcggccaggg cacgcatagg cggttttttg
      661 gaggtcgaac gtgggaaacg ggaccatcag gggaaaaggg gtgcggagat gaaagaaaag
      721 aggttccctt ttctggaaac gaaaacggtg atgttctgca aggcgttccc gtcgaagatg
      781 atcccggtgg acaagatgtc ctcctcggaa ggcctctgca atacttgcca ctacgaggaa
      841 tgccccctgt acagcgaagt cagcggcgtc gagaagggga tggagaacgt ccgcggattc
      901 cgcctccatt cggattacta ctaccacccc aagcacctgt gggtcgcccc ggcccccggg
      961 gaagagggcg aggcccgggt cgggatcgac gattttgcgg cccggctgat cggccgggtg
     1021 gaccgcgcat cggtgcccgc cgtcggcgtg ccggtgaagg agaacagcgt ctgtttcctc
     1081 ctccattccg ggcagcggac cgtccggctg gtttcccccg ccgacggggt cgtcaaggcc
     1141 gtcaacccga aggtggccgc ggatccctcc ctcctcaacg acgacccgta ctccgagggc
     1201 tggatcttct ccatgcggct caaaggggac gcagtgaagg ggctgtacca cgagaccgtc
     1261 gcccggacgt ggtacgagag cgaggtcgaa cggctgcagc gggtgttctc ctccgatctg
     1321 gggatgatgg cgacggacgg cggggaggcg cataaggaca tcagcagccg gttgaacgac
     1381 gcgcaatggg gaaagatcgt cagccaattt ctagggtaag agcaggaggt gcgccatggt
     1441 agtccttctc gtgctgctca cggtactcgg atgcatcggg gtgaacatgg ccctgcgtcg
     1501 gaaggaaaag gcggtgtccg tccgggagcc gtccgcgctg ttcccttcac tgacggcgca
     1561 ggagctgccg ggcggcctgt ttgtccacag cggccacacc tgggcgaagc tcgacgccgc
     1621 gggcgccgtt caggtggggc tggacggttt cgcccaggga atcctcggga gggtcgaccg
     1681 gttcgagctt cccccggacg gggcgacgct tcgccagggc gagccggcgt tcgccgccct
     1741 ccaggggggc aagcggatcg ggttcgtgtc tcccgtcgac ggcgtcgtct gcgcggtgaa
     1801 cgaacggatc aacgtcgacc cggcggcggc tcggaaggag ccttatgaga aggggtgggc
     1861 gttcatgatc cgcccgacca acctctccca gaacctgaag aagctccgga tcggcgcgga
     1921 agccgccgcg tggctggaaa gggaagtcag gagtttcacc gagttcctgt ctctgcaccg
     1981 ggcggtacct gtggaggtgg gggccaccct gccggacgga gggattcaca tcgagggaat
     2041 catggagacg atggacggag agatcctgca gatcgcgatc cggaagtatt ttcgatgacg
     2101 tcgaatacca agggaggtag agagatgtcc atcagcagac ggaacttcct gaaggtcgcg
     2161 gggacggccg ggggcgtcct gctcgcgggg ggcgccgcgt cggcccagat ggcgcgggcc
     2221 ccggagacct cggcggggaa cgtcgagttc aacgggatgc tcatcgacac gacgaagtgc
     2281 atcggctgcc gcgcctgcga ggaggcctgc aacgaggcga accatcttcc caagccgaag
     2341 gtgtccttct ccaccgagag cgtcttcgag gagacccggg acaccaccac cggcgcctac
     2401 acggtcgtga accggttccc gaacgagaag aagccggatg agccgatctt cgtccggaag
     2461 cagtgcatgc actgcaacca gccggcgtgc gcctccgcct gcctgacccg ggcgatggag
     2521 aagaccaagg aggccgcggt catttaccac aaggaccgct gcatggggtg ccgctactgc
     2581 atggtcgcct gccccttcga catccccagg ttcgagtaca acagccccac ccccttcgtc
     2641 tggaagtgca tcttctgcaa cgagcggcag aagaaggggg agccgcccgc ctgctccgag
     2701 gtgtgcccga ccggcgcgac cctcttcggg aagaagcggg atctgctgga gatcgccaag
     2761 acccggatct acaacgagcc gaaccggtac gtccacaaga tctacgggga gcacgaggtc
     2821 ggcgggaccg gctggctcta cctcacgggc gctccggagg agaagctcgg cctgaaaacc
     2881 gacctgccga cgacgcccta tcccgagctc acctccgggt tcctctacgg cgtgcccctg
     2941 gtgttcgtgc tgtggccgtc cctgctcatc gggctgaact acctcatcaa ggacagcaag
     3001 gtcagcgaaa agaaggaggc ctcccatgac gaacaggact gacgcatcgg ccgcgagcgc
     3061 cgaaggcacc atgaccttcc ggcagctggc tcgggaaacc atccggttcg tcctgagcga
     3121 gatgaagccg aaaggaaagt tgctgacgcc gttcaacgtc atcaccgggg tgatcatcct
     3181 ctccggcctc gtgatgatcg ccgtccggtt cgcctacggg ctgggcgccg tgtccaacct
     3241 ctcccagaac tacccctggg ggctctggat cgggttcgac gtcatcacgg gggtggcctt
     3301 cgccggcgga gcctacgtcc tgtgcttcgt cgtccacatc ctcaagatca agaagttcga
     3361 gccgattctc cgcgtcaccg tcctgaacgg cttcctcgcc tatgtgttct atgccggcgc
     3421 cctcctgctg gaccttgggc gtccctggaa cgtcatcaac cccatcatcg ggaacgcctt
     3481 cgggttgagc tccgtcctct tcctggtggc ctggcacttc ctgctgtaca tgatctgcga
     3541 gttcctcgag ttctcccccg tcgtcgcgca gtggctgaac tggcccaggg cgcgcaggat
     3601 cctcgagggg ctcaccaccg gcgccgtcat cttcgggatc accctctcca ccctccacca
     3661 gtccggactg ggagccctct tcctcctcgc gccgacgaag gtccacccac tgtggtactc
     3721 gggcaacatc ccggtgatgt tcttcgtctc ctccatcttc gcggggcttt ccatggtcat
     3781 gatcgagagc ttcttcacac agaaggcctt caaggaccgg atcggacacg acctccacgc
     3841 cgcccacgac agcatcctcc tcgggctggg gaagggcgcc gtcggagccc tcttcgccta
     3901 catcttctta aagctcgtcg acttcgtcca ttacaagcag tgggtccacc tcgccacacc
     3961 gatggggtac tggtacctct tcgagatcgt cgggttcgtc ctgcttccca ccgccctctt
     4021 cctccaggcg gtccggacgc gcaacgccag gctcgtccag ttcaccgcgt tcctcaccgc
     4081 cgcgggggtc atcctcaacc ggctcaacgt ctccgtcatc gggttcaagt ggtacgagac
     4141 cgtccggtac tacccctcct ggatggagat ctggatcacg ctggccatca tcagcatgga
     4201 actctgggtc ttccggtggg tcatcctgcg gatgcccgtg ttcagcgagg agcatatcgc
     4261 ggcggaggaa aaaaccgcgg aagtggggga agacgcggaa gtggtcacat ggaggacgcc
     4321 cgagtaatag acatctaggc cacgaagagg aagttccggg gggccccctc cgcacaagcg
     4381 gcaggggtgc cccccgttcc gcgttactcc ccgtccgtca tcagatgggt cttcgccagc
     4441 cccacccact ggtcgccgcc caggacccgg gcgatcccat ccaccatgag accgccgtcc
     4501 tgcaggaccg gccccaggct ttcgccgtgg agcgggtgga gcttgtcgag ggcgctctcc
     4561 atccaggccc tggccagctt ccccgagagg aggttccgcg tgttcgacgc gatccgggtg
     4621 gacttcacct tgagcagcca ccccttgccg tacggatcct cgcgcaggat ctcgggcgac
     4681 cggagaacct ccgggttcac ctcgacgacc tcgccgccca ccggcgacag catcgggatg
     4741 ggcacgccat cgaccacgag gctccacccc ttgtccccct gcgccagccg ggagccgacg
     4801 gggggcaggt cgaccgcgtc gatcttcccg atgaacttct gcgcgaagtc gtccagcccg
     4861 acgacgccga tggagcccgg ctccggccgg agccagccgt gtccctggtg gtagaagagc
     4921 ccctcgggga cccggaaccg ggtgacgttc tccggagcga tcgtcgcggc cgcccgcacc
     4981 tcgccgggcc ggtacatgta gcggcagaag agcacaaagg ccgcgaagaa cgcgatgacg
     5041 atcagatact cgatcccctt cgtggcgtag atgtctatga accggatgcc ttccatggtg
     5101 acctcctccg cgtcagcgga aatatttccg gatcgcgatc tgcaggatct ctccgtccat
     5161 cgtttccatg atcccctcga cgtggacccc gccgtcggcc agggtggcac cgacttcgac
     5221 ggggacggcc cggtgcagcg tcaggaactc cgcgaagctc cgcgcctccc gttccatcca
     5281 cgcggaggcc tccgcgccga tccgcagctt cgccaggttc cgggagaggt tggacggacg
     5341 gatcatgaac gcccacccct tctcatacgg ctccttgcgc gaagacgacg ggtcgacgtt
     5401 gatccggtca ttcaccgcgc agaccacccc gtcgatgggg gagacgaagt cgatccgctt
     5461 ccccgactgc agggcggcga acgccggctc gccctggcga accgtcgcac cgtccccggg
     5521 aagctcgaac cggtcgaccc tcccgaggat cccccgggcg aacccgtcca gccccacctg
     5581 cacggcgccg gagggatcga gcttcgccca ggtgtggccg ctatggacga acaggccgcc
     5641 gggaagttcc tgcgccgcca gggaagggaa ccccgcggcc ggttgccggg ccgccgcctc
     5701 ttccctacgc cgcagggcaa cgctcactcc gatgcatccg agtaccgtga tcaggacgag
     5761 aaggactacc atggcgcacc tcctgccatc atcccaggaa ttggctgacg atctttcccc
     5821 attgcgcgtc gttcaaccgg gtgctgatat ccttgagcgc ctccccgccg tccgtcgcca
     5881 gcatccccag atcggaggag aagaccctct gcagccgttc gacctcgctc tcgtaccatt
     5941 tccgcgcgac ggtctcgtgg tacagcccct tcaccgcgtc tcccttgagc cgcatcgaga
     6001 agatccaccc ttcggcgtac gggtcgtcgt ttacgatgga cggatccgca cccaccttcg
     6061 ggttgaccgc cttgatcacc ccgtcggcgg gggcgaccat ccggacggtc cggtggccgg
     6121 aatggaggag gaagcagacg ctgttctcct tcaccgacgc gccgacggcg ggcaccgatg
     6181 cgcggtccac ccttccgatc agccgggcgg aaaagtcgtc gatccccacc cgcgcctcgt
     6241 cctcttcccc gggagacagg gcgacccaca gatgtttggg gtggtagtag taatccgaat
     6301 ggaggcggaa cccgcggaca ttctccatcc ccttcccggc gccgctgacc tcgccgtaca
     6361 gggggcattc ctcgtagttg caggtgttgc acaggccttc cgaggaggac atccggtcca
     6421 ccgggatcat cttcgacggg aacgccttgc agaacatcac ggtcttcgtc tccagaaaag
     6481 ggcatctcgt ctctttcatc tgcgcacccc ttttcctctc aagtatccgt ttcccacgcc
     6541 ctacctccgg gatccgccta cgcgtgccct gcccgcatcc gcaccgcggc gacgacctcc
     6601 aggacgatga acccgattcc gatcaccagg tatgccatcg ttcccacctc cttccgcggg
     6661 tgccgtcccc gcgactatct ctacagcatc agccgtgcca gacgaggttc cggctcccaa
     6721 ggcgccgcaa aacaatctgt ttataaaggg gataccttgc cgaaaccgta ccaggggatg
     6781 gaaggaccgg aacatcccgg aatgcagaga ttctttacac ttccaggcgg ggaaagatta
     6841 catgttgtat ttcctacgga ttaaggagtt gcactattca acagtgaatt gattttttca
     6901 tcactccttc aaagggaggg cgcgttcatc taccataagg accgccgcaa ggggtgccgc
     6961 tactgcgtgg tcgcatgccc cttcgacatc cccaggttcg ggtacgacag tcccaccccc
     7021 ttcgctcgga gaaggaaaag gtggttgtgt cggacgccgc c
//
LOCUS       DATGYW010000372         3484 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_181425, whole genome shotgun sequence.
ACCESSION   DATGYW010000372 DATGYW010000000
VERSION     DATGYW010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3484)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3484)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3484
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181425"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..622)
                     /locus_tag="VK429_05150"
     CDS             complement(<1..622)
                     /locus_tag="VK429_05150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013705020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia channel protein"
                     /protein_id="HLN91228.1"
                     /translation="MNTGDTAWLLVSAALVMFMTPGLALFYGGMVRRKNILGTIVQSL
                     VLIGLISVEWALVGYSMAFGPDHAGIIGDLSWFGLSGVGLAPYKEYAATVPHQAFMVY
                     QMMFAVITPALITGAFAERFRFSTFLVFSLLWALLVYNPVAHWVWGIGGWIRNMGALD
                     FAGGTVVHITSGVSALAAALVVGKRKGFGSDNMAPHNLPMTVTGAAI"
     gene            833..1450
                     /locus_tag="VK429_05155"
     CDS             833..1450
                     /locus_tag="VK429_05155"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLN91229.1"
                     /translation="MGLYTRFILPKIVDLVCGTKPCMRQRAKVVPSALGCVLEVGFGS
                     GRNLPFYDKAKVRRVWALEPSRELWDMAEERVRGAGMPVEFLHGEAEEIPLPDRSADT
                     VLVTFTLCTVPDVTRALREMARVLKPGGELVFSEHGLAPDENVRRWQNRLNPIWSAFG
                     GGCNLNRPIPSLLEQGGFRLREISSMYLPGWRPARFTYWGRASAK"
     gene            1504..2268
                     /locus_tag="VK429_05160"
     CDS             1504..2268
                     /locus_tag="VK429_05160"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HLN91230.1"
                     /translation="MLRKPILLVLLVTLPWTGHAFAWSFAVAGDSRDDKDGIFSQILS
                     AVENSDMEFLLHTGDMVNRDAPGEWDLYRKATAGFHKPLRVVIGNHELYGDGTPEKFA
                     ERFGLPGTSWSFTHRDAHFAIVDNAKGTFPDKTLAWLDRDLAAHPKGKGGITTLIVAM
                     HIPPGTDGTRPHGTRFDYKERSANLLEILKRHRVDAVVSGHEHMQHVEDWEGILLLIS
                     GGAGAPMVPFQRYGYYRIDVENGKVRESFQRVNKAR"
     gene            complement(2330..>3484)
                     /gene="nrfD"
                     /locus_tag="VK429_05165"
     CDS             complement(2330..>3484)
                     /gene="nrfD"
                     /locus_tag="VK429_05165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011687335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HLN91231.1"
                     /translation="LILLYPYITGLVAGAFILASLERVFNVQAVRPTYRLALLTALAF
                     LLVAPLPLQLHLGHPERAYEIFMTPQPTSAMAMFGFVYLWYLMVVLVVEIWLDYRKEL
                     VLTCRASTGLKRAFYTVLTLGSNNISPAALRIDDKVGRFVTILGIPSAFLLHGYVGFI
                     FGSIKANPWWSSVLIPIVFLFSAIVSGIALVVLLYMIITPLTGGKINMKCVDKAVDFL
                     FYAVIVDFSLEMVDFIHRVYQSEEEIKILSEMVMNKLFASLIIIQVLLGMLVPLLLIS
                     LTKIFKKRFGLNEDMRKMVYFISVILIQFGIFATRWNVVIGGQMFSKSFRGLTTYKME
                     FGGIEGLLYAIALLALPVVILFVLLKVLPPWKELREEGEAGTEALGGAGM"
BASE COUNT          686 a         1082 c         1133 g          583 t
ORIGIN      
        1 ggatggcggc gccggtcacc gtcatcggca ggttgtgcgg tgccatgttg tccgacccga
       61 accctttccg tttccccacg accagggccg ccgccagcgc cgagaccccg gacgtgatgt
      121 ggacgaccgt tcccccggcg aagtcgaggg cgcccatgtt ccggatccac ccgccgatcc
      181 cccacaccca gtgggccacg gggttgtaca ccagcaaggc ccacagcagg ctgaagacga
      241 ggaaggtcga gaaacggaac cgttccgcga acgccccggt gatcagcgcc ggggtgatga
      301 cggcgaacat catctggtag accatgaagg cctggtgggg aaccgtggcg gcgtactcct
      361 tgtacggggc aagcccgacc ccggagagcc cgaaccagga gaggtcgccg atgatccccg
      421 cgtggtctgg cccgaaggcc atgctgtagc cgaccagcgc ccactcgacg ctgatgaggc
      481 cgatcagtac gagcgactgg acgatcgtcc ccaggatgtt cttcctgcgg accattcccc
      541 cgtagaacag cgcgagcccc ggcgtcatga acatgaccag tgccgcggac acgagcagcc
      601 aggcggtgtc tccggtgttc atcttcgttt cctcccgtca gtgatgggtg ccgacccttg
      661 cacgtagaga tagcaaccgg cgtgccacgg gataaacccc gggaatcccg gatattcccc
      721 cggcaccgac gaaaccggac cgacaattat gtcgtattta cgacattcat ggccggcggg
      781 agacaatcgt ttcaggaatc cctcagggca gttccatgca agaataatag cgatgggtct
      841 ctacacgcgt ttcatcctac cgaaaatcgt ggacctcgtc tgcggcacga agccgtgcat
      901 gcggcagcgg gcgaaagtcg tcccctccgc cctggggtgc gttctggagg tgggtttcgg
      961 ttcggggcgg aacctgcctt tctacgacaa ggcgaaggta cggcgcgtct gggcgctcga
     1021 accgtccagg gaactgtggg acatggccga agagagggtg cgcggcgccg gtatgcccgt
     1081 cgagtttttg cacggcgaag ccgaggagat ccccctgccc gaccggagcg cggacaccgt
     1141 tctggtgaca ttcacgctat gcaccgttcc cgatgtaacg cgggcgcttc gagaaatggc
     1201 ccgggttctc aagccgggcg gggaactcgt attttccgaa cacggcctgg cgccggacga
     1261 gaatgtccgg cggtggcaga atcgcctgaa tccgatctgg agcgctttcg gcggcgggtg
     1321 caatctcaac cggcccatcc cctccctcct ggagcagggg ggcttccggc tgcgcgagat
     1381 ttcctcgatg tatctgccgg ggtggagacc cgcgaggttt acctactggg gacgcgcctc
     1441 ggcgaagtga tctctctctc cgcggaagga tcgtgccgcc gggcaatgcg ttagaatgtg
     1501 aggatgctcc ggaaaccgat tctcctcgtt ctccttgtca ctcttccatg gaccgggcac
     1561 gccttcgcct ggtcgttcgc cgtcgccggc gacagccgcg acgataagga cgggatcttc
     1621 tcgcagatcc tctccgccgt ggaaaactcc gacatggagt tcctgctcca cacgggggac
     1681 atggtcaaca gggacgcgcc cggcgaatgg gacctgtatc ggaaggcgac cgcggggttc
     1741 cacaaaccac tgcgcgtcgt gatcgggaac cacgagctct acggtgacgg gaccccggag
     1801 aaattcgcgg agaggttcgg cctcccgggc acctcctggt cgttcaccca cagggacgcc
     1861 cacttcgcga tcgtggacaa cgcgaagggg acgttcccgg acaagaccct cgcctggctc
     1921 gaccgcgacc tcgccgccca cccgaagggg aaggggggga tcacgaccct catcgtggcg
     1981 atgcacatcc ccccgggtac ggatgggacc cggccccacg ggacgcggtt cgactacaag
     2041 gagcggagcg cgaatcttct cgagatcctg aagcggcacc gtgtggacgc cgtcgtgagc
     2101 ggtcacgagc acatgcagca tgtggaggat tgggaaggga tcctgctgct gatctccgga
     2161 ggcgccggcg ctccgatggt cccgttccag cggtacggct actaccggat cgacgtcgag
     2221 aatggcaagg tgagggagtc gttccagcgc gtcaacaagg cccgctagag gaaacggcgc
     2281 cggtggagcg atcctccggc gccgtcgttt cttcgatatc cgtcgcgggt tacatccccg
     2341 cgccccccaa ggcctccgtc ccggcttctc cctcttccct cagttccttc cacggcggga
     2401 ggaccttcag gaggacgaaa aggatgacca ccgggagggc cagcagagcg atcgcgtaga
     2461 gaagcccctc gatcccgccg aactccatct tgtacgtggt gagcccccgg aagctcttgg
     2521 aaaacatctg gccgccgatc accacgttcc accgggtcgc gaagatcccg aactggatga
     2581 ggatcacgga gatgaagtag accatcttcc gcatgtcctc gttcaggccg aagcgcttct
     2641 tgaagatctt cgtgagggag atgagcagga gggggaccag catcccgagc aggacctgga
     2701 tgatgatgag gctcgcgaac agcttgttca tgaccatctc ggagaggatc ttgatctcct
     2761 cctcgctctg gtagacccgg tggatgaaat cgaccatttc gagcgagaag tcgacgatga
     2821 cggcgtagaa gaggaagtcg accgccttgt cgacgcactt catgttgatc ttcccgcccg
     2881 tcagcggggt gatgatcatg tagaggagca cgaccagcgc gatcccggac acgatggcgg
     2941 agaagaggaa gacgatcggg atgagcacgc tgctccacca cgggttcgcc ttgatcgagc
     3001 cgaagatgaa cccgacgtac ccgtgaagca ggaacgccga tgggatgccg aggatcgtga
     3061 cgaagcgacc gaccttgtcg tcgatcctca gcgcggcagg gctgatgttg ttcgaaccca
     3121 gcgtgagtac ggtgtagaac gcgcgcttga ggccggtgct cgcccggcag gtcagcacga
     3181 gctccttacg gtagtcgagc cagatctcga ccaccaggac caccatcagg taccagagat
     3241 agacgaagcc gaacatcgcc atcgcggagg tcggctgcgg cgtcatgaag atctcgtacg
     3301 cgcgctccgg gtgcccgagg tgcagctgca gcggcagcgg cgcgacgagc agaaaggcca
     3361 gcgccgtgag cagcgccagg cggtacgtgg gacggaccgc ctgcacgttg aacacgcgct
     3421 cgagcgaggc gaggatgaag gcgccggcga cgagacccgt gatgtagggg tacagcaaga
     3481 tcag
//
LOCUS       DATGYW010000373         2143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_26338, whole genome shotgun sequence.
ACCESSION   DATGYW010000373 DATGYW010000000
VERSION     DATGYW010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26338"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1111
                     /locus_tag="VK429_05170"
     CDS             <1..1111
                     /locus_tag="VK429_05170"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91232.1"
                     /translation="RIKALARHERLEKLSDVRNLDFRFTEASFTGKWMMEVRDLSFGY
                     DVRHPLIEQLSFHVAKGDRIAVVGPNGKGKTTLLRLLAGELAPVAGLVKPTVNLKIGY
                     FGQTNVDRLCPDSSVEEEVRQANPALTRTQVRTLCGAVMFGGASAEKRVSVLSGGERS
                     RVLLGKILATPVNLLLLDEPTNHLDQESVDAFVEAVDAFEGAVILVTHIERVLSAMAT
                     KLVVFDGGAVKVFDGGYGDFLDRVGWQAEGREGGPTRASRQRPAKGREARRQRAEIVA
                     RRSKEVGSLRKSIEAIEAEIVLLEARLPADEEALIEASRRNDGAAIRTLKTTTFAARI
                     RIEGLFREMVTLGERLREAERAYAEELGEDPGPAG"
     gene            complement(1137..1346)
                     /locus_tag="VK429_05175"
     CDS             complement(1137..1346)
                     /locus_tag="VK429_05175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012530308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91233.1"
                     /translation="MLIITKRNAPEEALDAVKEYLIRHGFDIHQSTGANRTIIGVIGD
                     TDALDAREIEAMPGVSQVVRIRKDD"
     gene            complement(1348..1626)
                     /locus_tag="VK429_05180"
     CDS             complement(1348..1626)
                     /locus_tag="VK429_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012469705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HLN91234.1"
                     /translation="MEIGEIRKRIDLLDDVLLRIFNERARLALEIGRRKKDAGLPIYD
                     PSREKRIFARMKGDNPGPLDDGAIVRLFERVVDESRRLERIKSQGEGP"
     gene            1724..>2143
                     /locus_tag="VK429_05185"
     CDS             1724..>2143
                     /locus_tag="VK429_05185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011937651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HLN91235.1"
                     /translation="MPSFDVVSVVDMQEVDNAVNQAVKEIGQRYDFKGSKTEITLDKD
                     GIKVLTDDDYRLKAVVDVLQSKFVKRGVSLKALQYGKVEPASGGLVRQVIAIQQGISK
                     EKGREIVALVKQTKLKVQSQIQDEQVRVTGKNIDDLQE"
BASE COUNT          360 a          676 c          754 g          353 t
ORIGIN      
        1 gcgcatcaag gcgctggccc gccacgagcg tctggagaag ctgtccgacg tgcggaacct
       61 cgatttccgc ttcacggagg cgtccttcac ggggaagtgg atgatggaag tccgggatct
      121 ttccttcggg tacgacgtcc ggcatcccct catcgaacag ttgtcgttcc acgtggcgaa
      181 gggggaccgg atcgcggtcg tggggccgaa cgggaagggg aagacgaccc tcctccgtct
      241 gctcgccgga gagctcgcgc ccgtggccgg ccttgtgaag ccgaccgtga acctcaagat
      301 cggctacttc gggcagacga atgtggaccg cctgtgcccg gattcttcgg tcgaggagga
      361 agtgcggcag gcgaaccccg ccctcacgcg gacgcaggtg cgcacccttt gcggcgcggt
      421 gatgttcggg ggagcgtcgg cggagaagag ggtctcggtg ctgtcgggcg gggagcgcag
      481 ccgcgtgctg ctcgggaaga tcctcgccac cccggtgaac ctcctcctgc tcgacgaacc
      541 gacgaaccac ctcgaccagg agtcggtgga cgccttcgtc gaggcggtcg acgcgttcga
      601 gggagcggtg atcctcgtca cgcacatcga gcgggtcctc tccgccatgg cgacgaagct
      661 ggtcgtcttc gacggcgggg cggtcaaggt gttcgacggc ggctacggcg acttcctcga
      721 ccgcgtcggc tggcaggcgg aggggcggga gggaggcccg acacgggctt cccgtcagcg
      781 gcctgcgaag gggcgcgagg cgcggcggca gcgcgcggag atcgtcgccc gccggtcgaa
      841 ggaggtcggc tccctgcgca agtcgatcga ggcgatcgag gcggagatcg tgctgctgga
      901 ggcccggctc cccgcggacg aggaggcgtt gatcgaggcg tcccggagga acgacggcgc
      961 cgcgatccgg accctgaaaa cgaccacgtt cgcggcccgc atccggatcg agggtctctt
     1021 ccgggagatg gtcaccctcg gcgaacggct gcgggaggcg gagcgggcct acgcggaaga
     1081 gctcggggag gatcccggtc cggccggttg aacggttgcc cgggaggtcg tccggctcag
     1141 tcgtccttcc ggatccggac cacctggctc acgccgggca tcgcctcgat ctcccgcgcg
     1201 tccagcgcgt ccgtgtcgcc gatgacgccg atgatggtgc ggttggcgcc cgtggactgg
     1261 tgtatgtcga acccgtgacg gatcaggtat tccttcacgg cgtccagcgc ctcctcgggc
     1321 gcgtttctct tcgtgatgat cagcatccta cggtccttcc ccctgggact tgatccgttc
     1381 cagccgccgc gactcgtcca cgacccgctc gaacagccgg acgatggcgc cgtcgtccag
     1441 cggcccgggg ttgtccccct tcatccgcgc gaagatccgc ttctcccggg acgggtcgta
     1501 gatcggaagc cccgcgtcct ttttccgtcg accgatctcg agggccaacc gtgcccgttc
     1561 gttgaagatc cggagcagga cgtcgtccag caggtcgatc cgcttcctta tctcgccgat
     1621 ctccacgcgc acctctctcg ggtcatctgg tacgatgata ccttcttcac gttttcatgg
     1681 gaacgccggg aaacgcggat cggaaaaaga gggagggaag aggatgccgt cgttcgacgt
     1741 cgtatcggtc gtggacatgc aggaggtcga caacgcggtg aaccaggcgg tcaaggagat
     1801 cggccagcgg tacgacttca aggggtcgaa gaccgagatc acgctggaca aggacggcat
     1861 caaggtgttg accgacgacg actaccgcct gaaggcggtc gtcgacgtcc tccagtcgaa
     1921 gttcgtgaag cgcggggtct ccctcaaggc cctccagtac gggaaggtgg agcccgcctc
     1981 cggaggcctc gtccgccagg tgatcgccat ccagcagggg atctccaagg agaaggggag
     2041 ggagatcgtc gcgctcgtca agcagacgaa gctcaaggtc cagtcccaga tccaggacga
     2101 gcaggtccgg gtgaccggga agaacatcga cgacctccag gag
//
LOCUS       DATGYW010000374         1700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_79868, whole genome shotgun sequence.
ACCESSION   DATGYW010000374 DATGYW010000000
VERSION     DATGYW010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79868"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VK429_05190"
     CDS             complement(<1..260)
                     /locus_tag="VK429_05190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA reductase subunit A"
                     /protein_id="HLN91236.1"
                     /translation="MRTFIGIDLGSTTTKSVLIDENLEVLGRGITNSRSNYDVAARVS
                     KQEAKIAARFTLFRNALGKDAEHLLADLERNFRLEQFLSALR"
     gene            complement(280..1572)
                     /gene="bcrB"
                     /locus_tag="VK429_05195"
     CDS             complement(280..1572)
                     /gene="bcrB"
                     /locus_tag="VK429_05195"
                     /EC_number="1.3.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018522 - benzoyl-CoA reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA reductase subunit B"
                     /protein_id="HLN91237.1"
                     /translation="MSRQEVVKSNSQLIQKEMITRNYDRITSGSAKVSSTFVPGNLNE
                     LLMCFDIANNLPEINAIQNAMRKKSGEMIAEAERSGHSEDVCTYVKADIGMMAKGNIA
                     PNGKPFPDPDILLLSYTGCFTFMKWFELLREQYKCPTVMLHVPYAADGPPTKNMRDYI
                     VKQLKEDVIPVLEKVSGVKFDIDRLREYLRKSAIAENDLVWMLESSKRKPSPVDCYFG
                     GVYYMGPIFTAFRGTDEAIEYYRLLRAEIEERIAQGLCAQSPDGDMPEENYRLVVEGP
                     PNWTSFRDFWRMFSEAGAVVVASSYTKVGGVYDYDGFRHDPGHPLESLADYCLGVYTN
                     RNLPTRVDMLARNIVDYDADGLLINSIKSCNSFSAGQLVMMREIEKITGKPGAFIETD
                     LVDPRYFSAANVKNRLESYFQMIDQKRHAGGSAAASGA"
     gene            complement(1569..>1700)
                     /locus_tag="VK429_05200"
     CDS             complement(1569..>1700)
                     /locus_tag="VK429_05200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="benzoyl-CoA reductase subunit C"
                     /protein_id="HLN91238.1"
                     /translation="ITRIEPHGIPYIHIQYAENSSQMQPIREQSGTFADSIKLWSAS"
BASE COUNT          269 a          522 c          564 g          345 t
ORIGIN      
        1 tgccgcagcg cggagaggaa ctgctccagc cggaagttcc gctcgaggtc cgccagcagg
       61 tgctccgcgt ccttcccgag ggcgttccgg aacagggtga accgtgcggc gatcttcgcc
      121 tcctgcttcg atacgcgggc ggccacgtcg tagttggagc gggagttcgt gatcccgcgc
      181 ccgagaacct cgaggttctc gtcgatcagg accgacttgg tggtggtgga cccgagatcg
      241 atgccgatga acgtgcgcat gccgctttct cccttggggt tacgcgccgg atgcggcggc
      301 ggatccgccg gcgtggcgct tctggtcgat catctggaag tagctctcga gacggttctt
      361 tacgttcgcc gcggagaagt agcgcgggtc gacgaggtcg gtctcgatga aggcccccgg
      421 cttcccggtg atcttctcga tctcccgcat catgacgagc tggccggcgg agaagctgtt
      481 gcagctcttg atcgaattga tgagcagccc gtccgcgtcg tagtccacga tgttgcgcgc
      541 gagcatgtcg acgcgggtgg gcaggttccg gttcgtgtag accccgaggc agtagtccgc
      601 gagggactcc agcgggtggc ccgggtcgtg ccggaacccg tcgtagtcgt agacgccgcc
      661 gaccttcgtg tacgacgagg cgaccacgac cgcgcccgcc tcggagaaca tcctccagaa
      721 atcccggaac gaggtccagt tcggcggccc ctcgaccacg aggcggtagt tctcctccgg
      781 catgtcgccg tccggagact gggcgcacaa tccctgcgcg atccgttcct cgatctcggc
      841 ccggagcagc cggtaatact cgatcgcctc gtcggtcccc cggaaggcgg tgaagatcgg
      901 gcccatgtag tagacgcccc cgaagtagca gtcgacgggc gacggcttgc gcttcgacga
      961 ctcgagcatc cagacgaggt cgttctcggc gatcgccgac ttgcgcaggt actcccgcag
     1021 gcggtcgatg tcgaacttca cgccggacac cttctcgagg accgggatca cgtcctcctt
     1081 cagctgcttc acgatgtagt cgcgcatgtt cttcgtcggc ggaccgtcgg cggcgtaggg
     1141 gacgtgcagc atcaccgtgg ggcacttgta ctgctcccgg agcagctcga accatttcat
     1201 gaaggtgaag caccccgtgt agctgaggag gagaatgtcc gggtcgggga acggcttccc
     1261 gttgggggcg atgtttccct tcgccatcat gccgatgtcc gccttcacgt aggtgcagac
     1321 gtcctcggag tggcccgacc gctccgcctc ggcgatcatc tcgccggatt tcttgcgcat
     1381 cgcgttctgg atcgcgttga tctccgggag gttgttcgcg atgtcgaagc acatgagcag
     1441 ctcgttcagg ttcccaggga cgaaggtgga ggagaccttg gccgatccgc tcgtgatccg
     1501 gtcgtagttc cgggtgatca tctccttctg aatcaactgc gaattggact tgacgacctc
     1561 ctggcggctc atgacgcgct ccacagtttg atggagtcgg cgaaggtgcc cgactgttcg
     1621 cggatcggct gcatctggct cgaattctcg gcgtactgga tgtggatgta ggggatcccg
     1681 tgcggctcga tccgggtgat
//
LOCUS       DATGYW010000375         1592 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_461663, whole genome shotgun sequence.
ACCESSION   DATGYW010000375 DATGYW010000000
VERSION     DATGYW010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461663"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            789..1580
                     /locus_tag="VK429_05205"
     CDS             789..1580
                     /locus_tag="VK429_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018286297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HLN91239.1"
                     /translation="MGILQGRKGLILGVANEKSIAWGVARACHREGAELGFNYLGEAL
                     KKRVHPLAESIQSSFVEPLDVADDAQIDDFFAKAAARWGRLDFIVHSIAFANRESLSG
                     NFRNTSRADFHLALDISAYSFIACARRAARLMGPGGAMVTMSFLGAVRAVPNYNVMGV
                     AKAALEAATRYLAHDLGPEGIRVNAVSAGPIRTLAASGVGDFRKLMEKSARGALLRRN
                     VTQDEVGNAAAYLLSDWASGVTGEVHYVDAGFNIGSGDPGVELAP"
BASE COUNT          295 a          477 c          466 g          354 t
ORIGIN      
        1 ttgtgtggat cgtgaagtat gcttcggctt ccgtgcagcc gagatccttc cggatggcgt
       61 ccacttcgtc ctgtaactgt tcgaaaaaat ttttcttctt catgtgccac ctccgtgtgg
      121 cctccgaaga catcccgggg aaacggcgtc ggagccgccg cttgtcgcct ggcctggcta
      181 tccccgagaa ggggggacta tatgcttact ccggcggtcc tgccatcccg caatagccga
      241 tagccttctt ggtaacctta gattctttcg ccacctcacc ctctataaaa gtgcttaacg
      301 tagccgttac ctcggtagtg ccgcgccatg ccatacattc cgacccgaga cacttgtgac
      361 cctggaatcg gccatcattg ccaaccctca aagtcatggg acacatcttt tctttctttg
      421 ctacttcctc atcccatctc atgccgccct cctttccgtt gcgcggggtt tgcgggtttg
      481 cctgcttgct tcccgctttt tcccgcatat ccaaaaatac ggtacttgac aaacctctga
      541 aactcaatgg aatgaccaag ttccattcga accccggata atttattatt ggcaagatga
      601 acattgaccg gacgcactgg gtggacttcc ccccctccct taatgaatgg cgattacgat
      661 cgtcatgtgc aggatttcaa cgtgtatcga agccggagga tagcagggga cgaataatac
      721 cttggggcgg atcaagacat acgggttatt gttacgtttg aggtgagatc gaaacctggg
      781 ggtgtctcgt gggtattctg caaggcagga aagggctgat cctcggcgtc gccaacgaga
      841 aatccatcgc atggggcgtg gcaagggcct gtcaccgaga gggggccgag cttgggttca
      901 actatctcgg cgaggcgctg aagaaacggg ttcatcccct ggcggaatcg atccagtcga
      961 gcttcgtcga accgctcgac gtcgccgacg acgcccagat cgacgatttc ttcgccaagg
     1021 ccgcggcccg gtgggggcgg ctcgatttca tcgtgcactc catcgctttt gccaacaggg
     1081 aatcgctgag tggcaatttc cggaatacct cgcgcgccga cttccatctc gcgctggata
     1141 tttccgctta ctccttcatc gcctgcgccc ggcgggcggc ccggttgatg ggaccggggg
     1201 gggccatggt gacgatgagt ttcctcgggg cggtgcgcgc cgttccgaac tacaacgtga
     1261 tgggcgtggc gaaggccgcc ctcgaagcgg cgacccgtta cctcgcccac gacctcgggc
     1321 cggaggggat ccgcgtcaac gctgtctcgg ccgggccgat ccgtacgctg gctgcctccg
     1381 gcgtgggcga tttccgcaag ctgatggaga agagcgcccg tggcgccttg ctccgacgga
     1441 acgtgacgca ggacgaggtg gggaacgccg ccgcgtacct cctttcggac tgggcatcgg
     1501 gcgtgaccgg ggaagtgcac tacgtcgacg cgggattcaa tatcggcagc ggcgacccgg
     1561 gggtcgaact ggccccatag ggctcctcat cc
//
LOCUS       DATGYW010000376         1702 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_500806, whole genome shotgun sequence.
ACCESSION   DATGYW010000376 DATGYW010000000
VERSION     DATGYW010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1702
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_500806"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..162)
                     /locus_tag="VK429_05210"
     CDS             complement(<1..162)
                     /locus_tag="VK429_05210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005987101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP synthase"
                     /protein_id="HLN91240.1"
                     /translation="MYAPPKELTNFDLEKMVDTSDAWITERTGIQVRHIAEPGTPNSD
                     LCDRAARMAL"
     gene            complement(215..1237)
                     /gene="plsX"
                     /locus_tag="VK429_05215"
     CDS             complement(215..1237)
                     /gene="plsX"
                     /locus_tag="VK429_05215"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013515697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HLN91241.1"
                     /translation="MKIAVDAMGGDHAPREIVRGAVESARSNGLSLILVGQEERIRAE
                     LRQVDVSGAAVEVLHASEVVEMCDIPAIALRKKRDSSIRVGLRLVSDGKASSFVSAGN
                     SGAVMAGGLLILKKIHGVDRPAIAATIPTPHGPVVLVDAGANVESKPAHLLQFGYMGE
                     AYSRMILGIPRPRVGVVSIGAEDSKGSDLTRDTCELFRRTGLNFVGNVEGRDFFAGKA
                     DVFVCDGFVGNVAIKTMEGMATALGQFLKEEIGKSLMAKFGALLAERALRGVKDRLDY
                     EEYGGAPLLGVRGGIFICHGSSSERAIKNGIRAAGSLARCGVDVEIARSIAAQGHAAV
                     GAPTIP"
     gene            complement(1254..1436)
                     /gene="rpmF"
                     /locus_tag="VK429_05220"
     CDS             complement(1254..1436)
                     /gene="rpmF"
                     /locus_tag="VK429_05220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014958722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HLN91242.1"
                     /translation="MPNPKRRGSKCRRDKRRTHKKLSQPAVSTCPQCKATKRPHAVCP
                     TCGTYKGREVIAKTED"
     gene            complement(1440..>1702)
                     /locus_tag="VK429_05225"
     CDS             complement(1440..>1702)
                     /locus_tag="VK429_05225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012469997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HLN91243.1"
                     /translation="QVVASSVELHGEDLDVGYYDGTGVETNDILWEQVALELPLKVVC
                     SEACRGICPVCGKNRNREACSCVAGDAPGPFEILKNLKGKKE"
BASE COUNT          273 a          604 c          511 g          314 t
ORIGIN      
        1 gagcgccatc cgggcggccc tgtcgcaaag gtcggaattc ggcgtccccg gctccgcgat
       61 gtggcgaacc tggatcccgg tgcgctccgt gatccatgcg tcgctcgtgt cgaccatctt
      121 ttcgaggtcg aaattggtca actctttcgg aggggcgtac atccccagtc cgacgatttt
      181 cgatgccaaa gcttcccctc cccccgtgat tgccttacgg tatcgtcggc gcgcccaccg
      241 ccgcgtgtcc ctgcgccgcg atggaccggg cgatctcgac gtccacaccg cagcgcgcca
      301 gggagccggc cgcccggatc ccgttcttga tcgcccgctc gctggacgat ccgtgacaga
      361 tgaagatccc gccccgcacc cccaggagcg gagcgccgcc gtactcctca tagtccagcc
      421 ggtcctttac tccacgaagc gcgcgctccg cgagcagggc gccgaacttc gccatgaggg
      481 atttgccgat ctcctctttc aggaactggc cgagggccgt cgccatccct tccatcgtct
      541 tgatcgcgac gttcccgaca aaaccgtcgc agacgaagac atccgccttt cctgcgaaga
      601 aatcccgccc ctcgacgttc ccgacgaaat tgagcccggt gcgccggaac agctcgcacg
      661 tatcccgcgt gaggtccgac cccttcgaat cctccgctcc gatgctgacg acgccgacgc
      721 gcggccgggg gatccccagg atcatcctgg agtacgcctc gcccatgtac ccgaactgca
      781 gaaggtgggc gggctttgat tcgacgttcg cgccggcgtc gacgaggacc accgggccgt
      841 ggggcgtggg gatcgtcgcc gcgatcgcgg ggcggtccac gccgtggatc ttcttgagga
      901 tcaggagccc ccccgccatc accgcgccgg agttccccgc gctgacgaag gaggacgcct
      961 tcccgtcgga gacaaggcga agcccgacgc gtatcgacga atcccgtttc ttccggagag
     1021 cgatggccgg gatgtcgcac atctccacga cctcggaggc gtgcaacacc tcgaccgcgg
     1081 cgccggaaac gtcgacctgg cgcaactccg cgcggatccg ctcctcctgg ccgaccagga
     1141 tcagggagag gccgttcgaa cgggccgatt cgaccgcacc ccgcacgatt tcgcgcgggg
     1201 cgtggtcccc ccccatcgca tcgacggcga ttttcatcga atggaagagg gtgtcagtct
     1261 tcggttttgg cgatgacttc ccgaccctta taggtcccgc acgtcgggca gacggcatga
     1321 gggcgcttgg tcgccttgca ctgcggacag gtgctcaccg ccggctggga cagcttcttg
     1381 tgcgtgcgtc gcttgtcccg gcggcacttc gatccgcgtc gtttcggatt cggcatggct
     1441 tactcctttt tccctttcag gttcttgagt atctcgaacg ggccgggggc atcccctgcg
     1501 acgcaggaac acgcctcccg gttccggttc tttccgcaca cggggcagat cccgcggcac
     1561 gcctcggagc aaacgacctt cagcgggagt tccagggcca cctgctccca caggatgtca
     1621 ttcgtctcga cccccgtgcc gtcataatat ccgacatcga ggtcctcccc atggagttct
     1681 accgacgagg cgacgacctg at
//
LOCUS       DATGYW010000377         2008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_26918, whole genome shotgun sequence.
ACCESSION   DATGYW010000377 DATGYW010000000
VERSION     DATGYW010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26918"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1141
                     /locus_tag="VK429_05230"
     CDS             <1..1141
                     /locus_tag="VK429_05230"
                     /inference="COORDINATES: protein motif:HMM:NF019344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLN91244.1"
                     /translation="EAIDFALSMSDRYARSLRLPDKVINWLDTACVRVEIRGDVEKTV
                     TGKDVLDVIATETKNPPDILLRDVGERFRDIEERISRRLVGQKEAIASVARSLRMNKG
                     PLKANIYRPDGVLLFLGPTGVGKTEMAKALAEYLFGDERQMIRVDMSEYRDGALAVDK
                     LIGMPRGIVGSERGGILTNQVKDNPYSVVLLDEIEKADTYVHNLFLQAFDEGWLTDGR
                     GKKVYFSDTIIIMTSNLGAEELSKLTRPMGFGPGSVDFEPVRKAVLKAAENRFTPEFI
                     NRLDDVVVFTPLTIDEVRRIAELYIDTIRKRMAAHGKTLVVSDAAVTALARTGFSVKY
                     GARFLKRAIDEKVKVTITLKWKESDHFLVEEVDGEPVLITQKVPV"
     gene            1141..1620
                     /locus_tag="VK429_05235"
     CDS             1141..1620
                     /locus_tag="VK429_05235"
                     /inference="COORDINATES: protein motif:HMM:NF020473.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1844 domain-containing protein"
                     /protein_id="HLN91245.1"
                     /translation="MPEEKDDKGFKVIDRRGMEPPPSQGEAPPKPPEEEARGAEAKAG
                     NQPPPPGVEGGKGRGEEGASPLGVPRFLDLVQSLQMGAMVGLGMLQGPDGKRPPVDLP
                     AAKDAIDLLGILQEKTKGNLTKEEEEILREGLYHLRMGYMAMINPPPAGRGKEGNQR"
     gene            1617..>2008
                     /locus_tag="VK429_05240"
     CDS             1617..>2008
                     /locus_tag="VK429_05240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015745648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HLN91246.1"
                     /translation="MIRKSRVVVLVLAAVAAGIVLTAGFNFSPIARALWGDKEKPAVV
                     PAAAGLRMVPLDIPQLFKEVSPAVVNISTTQTVKLNRPRMRNPFGQQDPFDEFFNNYF
                     GRMPREQKNKSLGSGFIVSQDGYILTNN"
BASE COUNT          395 a          617 c          693 g          303 t
ORIGIN      
        1 cgaggcgatc gacttcgcgc tctccatgtc cgaccggtac gcccgttccc tgcgcctgcc
       61 ggacaaggtg atcaattggc tcgacaccgc atgcgtgcgc gtcgagatcc ggggcgacgt
      121 ggagaagacc gtcacgggga aggacgtgct cgacgtgatc gcgaccgaga cgaagaaccc
      181 tccggacatc ctcctccggg acgtggggga acggttccgg gacatcgagg agcggatctc
      241 ccgccggctg gtgggacaga aggaggcgat cgcctcggtg gccaggtcgc tgcggatgaa
      301 caagggcccc ctcaaggcga acatctaccg gccggacggc gtgctgctgt tcctcggccc
      361 cacgggcgtc ggcaagacgg agatggccaa ggcgctggcc gagtacctct tcggcgacga
      421 acggcagatg atccgggtcg acatgtccga ataccgggac ggagcgctcg cggtcgacaa
      481 gctgatcggg atgccgcgcg ggatcgtcgg gtccgagcgc ggggggatat tgacgaacca
      541 ggtgaaggac aacccgtact ccgtggtcct gctcgacgag atcgagaagg ccgacactta
      601 cgtccacaac ctctttctcc aggccttcga cgaggggtgg ctgaccgatg ggcgcgggaa
      661 gaaggtctac ttctccgaca cgatcatcat catgacgagc aacctcgggg cggaggagct
      721 gtcgaagctc acgcggccga tggggttcgg gccggggtcg gtcgatttcg aaccggtccg
      781 caaggcggtt ctgaaggccg ccgagaaccg gttcacgccc gagttcatca accgcctcga
      841 cgacgtcgtc gttttcacgc ccctcaccat cgacgaggtc cggcgaatcg ccgagctgta
      901 catcgacacg atccggaaga ggatggcggc gcacgggaag acgctggtcg tctccgacgc
      961 ggccgtcacc gccctggccc gcacggggtt ctccgtcaag tacggcgcgc ggttcctcaa
     1021 gcgcgcgatc gacgagaagg tcaaggtgac catcacgttg aagtggaaag agtccgacca
     1081 cttcctcgtc gaggaggtcg acggggagcc ggtcctcatc acgcagaagg tgcccgtctg
     1141 atgccggaag agaaagacga caagggattc aaggtgatcg accggagggg aatggagccg
     1201 ccgccttcgc agggcgaagc cccgccgaag cctccggagg aggaggcgcg cggtgcggag
     1261 gcgaaggccg ggaaccagcc tcctcccccg ggtgtcgaag gaggaaaagg ccgcggggag
     1321 gaaggcgcgt ccccgctggg agtcccccgg ttcctcgacc tcgtccagtc cctgcagatg
     1381 ggcgcgatgg tcggtctcgg catgctccag ggaccggacg ggaaacgccc tccggtcgac
     1441 ctgccggcgg cgaaggacgc catcgacctt ctcgggatcc tgcaggagaa gacgaagggg
     1501 aacctgacga aggaagagga ggagattctc cgcgaggggc tgtaccacct ccggatgggg
     1561 tacatggcga tgatcaaccc gcccccggcg gggcgcggaa aggaaggaaa tcagcgatga
     1621 tccgcaaaag cagggtggtt gtcctcgttc tcgcggcggt ggccgccggg atcgtgctga
     1681 cggcgggatt caacttctcg ccgatcgccc gagccttgtg gggcgacaag gagaagccgg
     1741 cggtggtccc cgcggcggcg gggctgcgga tggtccccct ggacatcccg caacttttca
     1801 aggaagtctc cccggcggtg gtcaacatct ccaccaccca gacggtgaag ctcaaccgcc
     1861 ccaggatgcg caacccgttc ggtcaacagg atccgttcga tgagttcttc aacaactatt
     1921 tcggtcggat gccgagggag cagaagaaca agtcgctcgg ttccgggttc atcgtctcac
     1981 aggacggcta catcctcacg aacaacca
//
LOCUS       DATGYW010000378         1721 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_246299, whole genome shotgun sequence.
ACCESSION   DATGYW010000378 DATGYW010000000
VERSION     DATGYW010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246299"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..786
                     /locus_tag="VK429_05245"
     CDS             <1..786
                     /locus_tag="VK429_05245"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLN91247.1"
                     /translation="VEETGNLASQAFWERNWAVKKRPGHYNPRNYSHRRFDAFFRRHL
                     QGAAGRTMLEVGCAQSSWLPYFHLAYGCRVSGIDYSPTGCRMAKQLLDEAGVPGEVLE
                     RDLFADNSDLEGAFDFLFSLGFIEHFEDTAGALARMRRFLKPGGTILTIVPNFRGWLG
                     ALQKRVHPEVYGMHILLDLPDLERAHRDAGFTTVEAGYLGTIASEVVKYPDPAPLRLR
                     ILRKALKKITKACWLLCRAAGRHPESARLSPYIAYVGTSTGTT"
     gene            complement(810..>1721)
                     /locus_tag="VK429_05250"
     CDS             complement(810..>1721)
                     /locus_tag="VK429_05250"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HLN91248.1"
                     /translation="SSFDPAAVVGMVRLFRREKVDVVNTHSGKDSWVGSVAAKIAGVP
                     LLLRTRHISVPVRRGWYNLIYRWPDGYVTTGEMIREHLIAVGIPPDRVVSIPTGVDVG
                     RFSPDVSGDAVRAEFGVGRGEPLVSVIGVLRSWKRHDVFLEAVRLLRAGGSPVRALVV
                     GEGPQRERIAGEIDAKDLAGAVRMTGYRRDIPEIVAASDLVVLPSDRFEGVPQVLLQA
                     LAMGRAVVASPIGGIPEVVHHETTGLLCPAGDPSAFADAIARLLAEPELRERLGAAGR
                     DLVLSRYSSTAMCERTEGFYERLLSAK"
BASE COUNT          295 a          609 c          567 g          250 t
ORIGIN      
        1 gtagaggaaa cgggaaacct tgcgagccag gcgttctggg aacgaaactg ggcggtaaaa
       61 aaacgccccg gccactacaa tccgcgcaac tattcccacc ggcggttcga cgcgttcttc
      121 cggcggcacc ttcagggggc ggccgggcgc acgatgctcg aggtcggttg cgcccagtcg
      181 tcgtggcttc cctattttca ccttgcctac ggctgccggg tgtccggaat agactactcc
      241 ccgaccggat gccggatggc gaagcaactc ctcgacgaag ccggcgtacc gggggaggtg
      301 ctggaacgcg atcttttcgc ggacaacagc gatctcgagg gagccttcga cttcctcttt
      361 tccctgggat tcatcgagca cttcgaagac accgcagggg ccctggcccg gatgcgccgc
      421 ttcctgaagc ccgggggcac gatcctcacg atcgtgccga acttccgcgg ctggctcggc
      481 gccctccaga agagggtcca tcccgaggtg tacggaatgc acatcctcct ggatcttccg
      541 gatctcgaac gggcacaccg cgatgcgggg ttcacgaccg tggaggcggg gtatctcggc
      601 acgatcgcct cggaagtggt caagtacccc gatcccgccc ccttgcggct gcggatcctc
      661 aggaaggccc tgaagaagat cacaaaggcg tgctggctcc tctgccgggc ggccggccgc
      721 catccggaat ccgcgcgcct ctccccgtac atcgcctacg tgggaacatc gaccggcacg
      781 acctgaaggc tcccgccgtg gccgcgggac tacttcgcgg agaggagccg ctcgtagaac
      841 ccctccgtcc tctcgcacat cgccgtcgac gagtagcggg agaggacgag gtcccggccc
      901 gccgccccga ggcgttcccg aagctccggt tcggcgagaa ggcgcgcgat cgcatccgcg
      961 aaggcggacg ggtccccggc cgggcagagg agcccggtcg tttcgtggtg gaccacctcc
     1021 gggatccccc cgatcggtga cgcgacgacg gcgcggccca tcgccaacgc ctgcaggagg
     1081 acctgcggca ccccctcgaa ccggtcggac ggcaggacga ccaggtcgga ggccgcgacg
     1141 atctccggga tgtcgcgccg gtacccggtc atccggacgg cgccggcaag gtccttcgcg
     1201 tcgatctctc ccgcgatccg ttcccgctgc gggccttcgc ccacgaccag cgcccgcacc
     1261 ggggagcccc ccgcacggag aaggcggacc gcctcgagga agacgtcgtg gcgcttccag
     1321 ctgcgaagaa cgccgatcac ggagacgaga ggctcccccc ggccgactcc gaactcggcc
     1381 cggaccgcgt cgccggaaac gtccggcgag aagcggccca cgtccacccc tgtcggaatg
     1441 gagacgacgc gatcgggggg gatcccgacc gcgatgaggt gctcccggat catctccccg
     1501 gtggtcacgt acccgtcggg ccagcggtag atgaggttgt accatcccct ccgcaccggg
     1561 acggagatgt ggcgcgtccg aaggaggagc ggaacgcccg cgatcttcgc cgcgacggac
     1621 cccacccacg aatccttccc gctgtgggtg ttgaccacgt cgaccttctc ccgccggaag
     1681 aggcggacca tcccaacgac cgcggcgggg tcgaacgagg a
//
LOCUS       DATGYW010000379         1661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_462340, whole genome shotgun sequence.
ACCESSION   DATGYW010000379 DATGYW010000000
VERSION     DATGYW010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462340"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            392..>1661
                     /locus_tag="VK429_05255"
     CDS             392..>1661
                     /locus_tag="VK429_05255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015412755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HLN91249.1"
                     /translation="MVRTYRYIRWYGELSLGDVPLVGGKNASLGELYRELVPKGVKVP
                     NGFAVTAAAYRDLVRTAGILPEMEALVAGLSREDLEEFARRGSLLRELIYQAPLPQGL
                     ADEIASAYGTLCAEYGKNTDVAVRSSATAEDLPTASFAGQQESYLNIRGTAQLLDASR
                     RCFASLFTDRALSYRIDQGFDHFRVALSVGVMKMVRSDLAASGVIFTLDTESGFRDVV
                     LINASWGLGENIVQGAVNPDEFFVFKPALKEGFRPVIGRKLGAKVMKMIYGTGTSKVL
                     TRNVGVPKEDRRRFCLTEEEVLTLARQAMAIEEHYTRKAGRDTPMDIEWAKDGVSGEI
                     FIVQARPETVQSQKRMEFLETYRLEGKGPVLVQGVSVGEKIAAGPARAIIDVHRLQEF
                     QHGEILVADTTTPDWEPVMKKASAIVTNRGG"
BASE COUNT          312 a          494 c          558 g          297 t
ORIGIN      
        1 ggagcaagtc gcgggcagcg gagatcctcg ggctgtcgcc tacctacctc tcccgcctcc
       61 tccgcgtcct gggggtggag gggaaggcga acgacgcctg acgcgggcag gaaacgcctt
      121 gtagggttgc aatccctccc cctcgaaggg aggttcactt caaagatact tcgtctgtgt
      181 gtttcttcca aaagaaaggt gcaccctcgc cctgttttgg cccttcagga ggtctacgaa
      241 attgttgtag aaacagacga accccgcgtg cgtctcccta acatcgatcc ggaacgggtt
      301 aatgctttcg aactgttctt gcattaagat tggggtggat cgaacccccg aagccatgcc
      361 gggcggaaga cgcccggaga gggagagtga catggtgaga acgtacagat atatccgctg
      421 gtacggtgag ctttcccttg gcgatgtccc cctggtgggg gggaagaacg cctccctcgg
      481 tgagttgtac cgcgaactgg tcccgaaggg ggtgaaggtc ccgaacggtt tcgccgtgac
      541 cgcggcggcg taccgggatc ttgtgcgcac cgcagggatc cttccggaaa tggaggcgct
      601 cgtcgcgggt ctttcgcggg aagacctcga ggagttcgcc cgaagaggga gcctgctccg
      661 cgagttgatc tatcaggccc cccttccgca gggccttgcc gacgagatcg catccgctta
      721 cgggacgttg tgcgccgaat acgggaagaa cacggacgtg gcggtgcgct ccagcgccac
      781 ggccgaggac cttcccacgg cgtccttcgc cgggcaacag gagtcgtacc tgaacattcg
      841 ggggacggcg cagctcctgg acgcttcccg ccgttgcttc gcctccctct tcacggaccg
      901 ggccctttcg taccggatcg atcagggatt cgaccatttc cgggtggccc tctcggtcgg
      961 ggtgatgaaa atggtccgct cggatctcgc cgcaagcggc gtgattttca ccctcgacac
     1021 ggagtccgga ttccgggacg tggtcctcat caacgcctcc tggggccttg gggagaacat
     1081 cgtccagggg gccgtcaacc ccgacgagtt cttcgttttc aagccggccc tgaaggaggg
     1141 gttccgtccc gtcatcggca ggaagctcgg cgcgaaagta atgaagatga tctacgggac
     1201 cggaacctcg aaggtcctga cccggaacgt cggggtgccg aaggaagacc gccgccgctt
     1261 ctgcctcacg gaagaggagg tgctgaccct ggcccgacag gccatggcaa tcgaggagca
     1321 ctacacccgg aaggcgggcc gggacacgcc catggatatc gagtgggcca aggacggtgt
     1381 ttccggggag atcttcattg tccaggcccg ccccgaaacc gtgcagtccc aaaagcggat
     1441 ggagttcctg gagacctacc ggctggaggg gaagggaccg gtcctggtcc agggcgtgag
     1501 cgtcggggag aagatcgcgg cagggccggc gcgggcgatc atcgacgtgc atcgcctcca
     1561 ggagttccaa catggggaga tcctggtggc cgataccacc acgccggact gggagccggt
     1621 gatgaagaag gcgtcggcga tcgtcacgaa ccggggcgga c
//
LOCUS       DATGYW010000380         2249 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_130272, whole genome shotgun sequence.
ACCESSION   DATGYW010000380 DATGYW010000000
VERSION     DATGYW010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2249
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130272"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            43..522
                     /locus_tag="VK429_05260"
     CDS             43..522
                     /locus_tag="VK429_05260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HLN91250.1"
                     /translation="MLFSEDALKFLNLGINSEIAAYVFYKHAGVIVKEKGLQETLHKL
                     ASDEKGHFLSLEDLYDRNVRSEMWAPYKDILGKKGLPDIDELVQETHKELLARIRGVA
                     TKREVLEMALGLEKEAFTLFSEGSAKMKDPELKKVFDFLTGFERNHVQLIEKELAAL"
     gene            complement(583..1881)
                     /locus_tag="VK429_05265"
     CDS             complement(583..1881)
                     /locus_tag="VK429_05265"
                     /inference="COORDINATES: protein motif:HMM:NF015316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpP1/FadL family transporter"
                     /protein_id="HLN91251.1"
                     /translation="MRGWKIVSVLLVLLFTASTSFAAGFRIPEAGAKAMGMGFAFTAQ
                     ADDPSAIYYNPAGLTQLKGNNLMVGATYLGLDGGEFTGTTPLTGGATASESQKSLDFI
                     IPNAYYTHTTSDGYIAYGVGIFTPFGLGQEYENKNTSIFRNQITLIDLQTVVVNPTIA
                     FKINEYLSVGAGIDYMWGKAKLEKTPVAPGAGNLYNSTLESDWGLDGDAWGYNFGILL
                     KPTENFRIGANYRSPFTLKIKDADVNISNTNPAYASGTLGATPASTKGSATVAMPATF
                     ALGAAYTIGKLTVEADADWTFWSSFQSLPITIQDQVPTLFSTNAPKQWQDVVAFRIGA
                     EYRVTAPLSLRAGFVYDPTPVPASTMGPELPDSNKLDYTVGAGYKIGSWTIDVAGMYI
                     DKKDRTVNNQAVTAAGGTGFNGTWSGGSAWLASLDVGYRF"
     gene            complement(1955..>2249)
                     /locus_tag="VK429_05270"
     CDS             complement(1955..>2249)
                     /locus_tag="VK429_05270"
                     /inference="COORDINATES: protein motif:HMM:NF020660.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-amylase/4-alpha-glucanotransferase
                     domain-containing protein"
                     /protein_id="HLN91252.1"
                     /translation="PDRYYEGMGDARDLSSSGVAKGVRGFRVVDAWRNVAAAAALDRE
                     CVVLRGPIETASLSESGAEKIHQGVCLRILFPVRLAPGKHERYSILWSFKSVD"
BASE COUNT          424 a          717 c          690 g          418 t
ORIGIN      
        1 tggtagaaaa gtgtatccat ccaaccgcgg agggcgcaca ccatgctatt ttccgaagac
       61 gcgctgaagt tcctcaacct gggcatcaac tccgagatcg ccgcgtacgt tttctacaag
      121 cacgccggcg tcatcgtgaa ggagaagggg cttcaggaga cgctccacaa gctggccagc
      181 gacgagaagg ggcacttcct gtcgctggaa gacctctacg accggaatgt ccggtccgag
      241 atgtgggcgc cctacaagga catcctgggc aagaaggggc ttccggacat cgacgagctc
      301 gtgcaggaaa cgcacaagga gctgctcgcc cggatccggg gggttgccac gaagcgcgag
      361 gtgctggaga tggccctggg gctggagaag gaggcgttca ccctcttcag cgaggggtcg
      421 gcgaaaatga aggacccgga gctgaagaag gtgttcgact tcctcacggg gttcgagcgg
      481 aaccacgtgc agttgatcga aaaggaactc gccgcgctgt aaacccttgc cgaggtatcg
      541 cgcggggaag ggccttgagg cccctccccg ccgcgcgtca tcctagaatc tgtaccctac
      601 atcgaggctg gccagccagg cgctcccacc actccaggtg ccgttgaagc cggtcccccc
      661 cgccgcggtg acggcctggt tgttgacggt acggtccttc ttgtcgatgt acatgccggc
      721 cacgtcgatc gtccacgacc cgatcttgta ccccgccccg accgtgtagt ctaacttgtt
      781 cgagtccgga agctccggcc ccatcgtgga tgcggggacc ggggtcgggt cgtagacaaa
      841 gcccgcccgc aaggaaagag gggctgtcac ccggtattcc gcgccgatgc ggaacgcgac
      901 gacatcttgc cattgtttcg gggcattggt actgaagagc gtcggaacct gatcctggat
      961 ggtgatcggg agactctgga aactgctcca gaacgtccag tccgcgtccg cctccaccgt
     1021 cagcttgccg atcgtgtacg cggcgccgag ggcgaaggtg gcgggcatcg cgacggtggc
     1081 gctccctttc gtacttgcag gggttgcccc taacgtgccc gatgcgtaag cagggttggt
     1141 gttcgagatg ttcacatccg cgtccttgat cttgagggtg aacgggctgc ggtagttggc
     1201 gccgatccgg aagttctccg tgggcttcag gagtatcccg aagttgtacc cccacgcgtc
     1261 gccatccaac ccccagtctg actcgagtgt cgaattgtag agattgcctg cgccgggggc
     1321 cacgggcgtc ttttcgagct tcgccttccc ccacatgtag tcgatccccg cgcccacgga
     1381 aaggtactcg ttgatcttga acgcgatcgt cggattgacc acgaccgtct ggaggtcgat
     1441 cagcgtgatc tggttccgga agatgctggt gttcttgttc tcgtactcct ggcccagccc
     1501 gaacggcgtg aagatcccga cgccataggc aatatacccg tcggaggtgg tatgcgtgta
     1561 gtacgcattc gggatgatga agtcgagcga cttctggctc tcactcgcgg tcgcgccgcc
     1621 ggtcagcggc gtcgtccccg tgaactcccc gccgtccaac cccaggtacg tcgcgccgac
     1681 catgaggtta ttccccttga gctgcgtgag ccccgcgggg ttgtaataga tagcggacgg
     1741 gtcgtccgcc tgcgccgtga acgcgaatcc catccccatc gccttcgccc cggcctccgg
     1801 aatccggaac ccggcggcga aggacgtcga cgccgtgaac agcaggacca gcagaaccga
     1861 tacgatcttc catcccctca tgcgcaccct ccttgcgggt gggacccgcc ccgtatggaa
     1921 ttcatgtgga cccaacatac cgttttacga ttcgtcaatc aacggatttg aacgaccaaa
     1981 gaattgaata tcgttcatgc tttcccggcg ccagccggac ggggaagaga atccgcaggc
     2041 agaccccctg gtggatcttc tccgcccccg actcggaaag ggacgccgtc tcgatcggcc
     2101 cccgcagcac gacacactcc ctgtcgaggg ccgccgccgc agccacgttt cgccaggcgt
     2161 cgacgacgcg gaaaccgcgc acacccttcg cgaccccgga agaggaaagg tcgcgcgcat
     2221 cgcccatccc ctcgtaatac cggtccggc
//
LOCUS       DATGYW010000381         2919 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_462471, whole genome shotgun sequence.
ACCESSION   DATGYW010000381 DATGYW010000000
VERSION     DATGYW010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2919
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462471"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..340
                     /locus_tag="VK429_05275"
     CDS             <1..340
                     /locus_tag="VK429_05275"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010877391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HLN91253.1"
                     /translation="AVLLRGRPGQIYNVGGGNERTNIEITKLLIAAMGKDERSMKFVP
                     DRPGHDRRYAIDDSKIRAELGVVPQVPFEEGLRATVRWYIDNEPWWRAILSGEYQSFY
                     DRWYVRKDRT"
     gene            376..759
                     /locus_tag="VK429_05280"
     CDS             376..759
                     /locus_tag="VK429_05280"
                     /inference="COORDINATES: protein motif:HMM:NF016763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HLN91254.1"
                     /translation="MLVVLIGITLTLTSIPNPQFGPTFRWSDKVAHFGCYGAAGFLFV
                     LWRMESGKGAAVAVLCAVLFAALLGAVDEFHQQWIPGRSMEFFDWVADFVGGSTGAFG
                     AAVAASQLPFLLTRKNPPSSRAVTN"
     gene            841..1593
                     /locus_tag="VK429_05285"
     CDS             841..1593
                     /locus_tag="VK429_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003461132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HLN91255.1"
                     /translation="MKILVAIKPVPNPDEKVKIKGDGSGIVLDNIKMVVNPFCEIAVE
                     EALRIREKLTGEVVIVTVGPKEGEQQVRTALAMGADRAVLVEAGTDLDSLAVAKVLAK
                     VVADEKAELVLMGKQSVDDDNNQVGQILAAVLGWPQATFASKVEFAADNKKANVTREV
                     DGGLETIEVALPAVVTVDLRLNEPRYASLPGIMKAKKKELKVVPVASLGVDTTPRVKV
                     LSYAAPKQRAGGGRVADVAELMSKLKSEAKVF"
     gene            1604..2578
                     /locus_tag="VK429_05290"
     CDS             1604..2578
                     /locus_tag="VK429_05290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012978299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HLN91256.1"
                     /translation="MADILVVVEHQDGVFKKNTLSVVSAAKALSGLIGGEVDALVLGD
                     GVAAVGDVAAGTGVRKVLLGEGAAFAKYLAVTYAGAVAQVVKSKGYGAVFAPASTFGK
                     DFMARLSGLLDAPLASDIVGLEKDGDALRVKRPMYAGNAIGTVELMGSPLLFTVRQTA
                     FDAAAMGGAKAPVEKVAVTAEAGGTAFVSRQETKSERPELTEARVIVSAGRGIKAQEN
                     FKLVEELADQLNAAIGASRAAVDAGWAPNDWQVGQTGKIVAPELYIALGISGAIQHLA
                     GMKDSKVIVAINKDEEAPIFQVADYGLVADLFKAVPEMVAELKKLKSA"
     gene            2638..>2919
                     /locus_tag="VK429_05295"
     CDS             2638..>2919
                     /locus_tag="VK429_05295"
                     /inference="COORDINATES: protein motif:HMM:NF015666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HLN91257.1"
                     /translation="MADIRSEKGLLSRIKAKNFTAAIVGMGYVGLPLAMEYADAGIPV
                     IGIDIDGSKVRALREGKSYIGDVPSEAVKSAVDAGLFTPTTDYSAVGMAD"
BASE COUNT          511 a          800 c         1137 g          471 t
ORIGIN      
        1 ggcggtgctg ctgcgcggtc gtcccggcca gatctacaac gtgggcgggg gaaacgagcg
       61 gacgaacatc gagatcacga agttgctgat cgccgcgatg gggaaggacg agcggtcgat
      121 gaagttcgtc cccgaccggc ccggtcacga ccggcggtac gcgatcgacg attcgaagat
      181 ccgggcggag ctgggcgtcg tcccgcaggt cccgttcgag gaggggctgc gcgccacggt
      241 gcgctggtac atcgacaacg aaccgtggtg gcgggcgatc ctgtccggcg agtaccagtc
      301 gttctacgac cgctggtacg tccgaaagga ccgcacctga acacgttatc cccgcggggg
      361 cggctgtatc tttcgatgct ggtcgtgttg attgggatca ccctcacgct gacgtcgatc
      421 ccgaacccgc aattcggccc caccttccga tggtcggaca aggtcgccca cttcggatgc
      481 tacggcgccg ccgggttcct gtttgtcctc tggcgcatgg aatccggcaa gggagcggcg
      541 gtggctgtgc tgtgcgcggt gctcttcgcg gctctcctgg gggccgtgga cgagtttcac
      601 cagcagtgga tccccgggcg gtcgatggaa tttttcgatt gggtggccga cttcgtgggc
      661 gggtcgacgg gagccttcgg cgcggcggtc gcggcctcgc agcttccctt cctcctcacg
      721 cggaaaaatc ccccctcttc ccgcgccgtt acgaattgaa tcgtcattca ttcttgcgtt
      781 tgatctgcgt tcccgatatg ttatggcgtt cgaagcgttg aattccatgg gaggtgcgac
      841 gtgaagatcc tggtcgccat caagccggtc cccaaccccg acgagaaggt caagatcaag
      901 ggggacggga gcgggatcgt cctggacaac atcaagatgg tcgtgaaccc gttctgcgag
      961 atcgcggtcg aggaggcgct gcggatccgg gagaagctga ccggggaagt ggtcatcgtg
     1021 accgtcggcc cgaaggaggg cgagcagcag gtgcgcacgg cgctggcgat gggcgcggac
     1081 cgcgcggtgc tggtcgaggc ggggacggac ctcgactcgc tggcggtggc gaaggtgctg
     1141 gcgaaggtcg tcgccgacga aaaggccgag ctggtgctga tggggaagca gtcggtggac
     1201 gacgacaaca accaggtggg gcagatcctg gcggcggtgc tcgggtggcc gcaggcgacc
     1261 ttcgcgtcga aggtcgagtt cgccgcggac aacaaaaagg cgaacgtgac ccgcgaggtc
     1321 gacggcgggc tggagacgat cgaggtggcg ctcccggcgg tcgtgaccgt ggacctgcgg
     1381 ctgaacgagc cgcggtacgc gtcgctcccc gggatcatga aggcgaagaa gaaggagttg
     1441 aaggtcgttc cggtggcgtc gctgggcgtg gacacgacgc cgagggtgaa ggttctctcg
     1501 tacgccgcgc cgaagcagcg cgcgggaggc ggccgggtgg cggatgtcgc ggagctgatg
     1561 tcgaagctga aatccgaggc gaaggtcttt taggaggccg tacatggcgg acatactggt
     1621 agtcgtcgag catcaggatg gggtcttcaa gaagaacacg ctgtcggtcg tgtcggcggc
     1681 caaggcgctg tccggcctca tcggaggcga ggtggacgcg ctggtcctgg gcgacggcgt
     1741 cgcggcggtg ggagacgtgg cggccggcac gggcgtgcgc aaggtcctgc tgggcgaggg
     1801 ggcggcgttc gcgaaatacc tcgcggtgac gtacgcgggc gcggtggcgc aggtggtgaa
     1861 gtcgaagggg tacggcgcgg tgttcgcgcc ggcctccacg ttcgggaagg atttcatggc
     1921 gcggctgtcc gggctgctcg acgcccccct ggcgagcgac atcgtcgggc tggagaagga
     1981 cggggacgcg ctgcgggtga agcgcccgat gtacgcgggg aacgcgatcg gcacggtgga
     2041 gcttatgggc agcccgctcc tgttcacggt gcggcagacg gcgttcgacg cggcggcgat
     2101 gggtggagcg aaagcccccg tggagaaggt ggcggtcacg gcggaggcgg ggggcacggc
     2161 gttcgtctcg cggcaggaga cgaaatcgga gcggccggag ctgacggagg cgcgggtgat
     2221 cgtctccgcg gggcgcggca tcaaggcgca ggagaacttc aagctggtcg aggagctcgc
     2281 ggaccagttg aacgcggcga tcggggcgtc gcgggcggcg gtggacgcgg ggtgggctcc
     2341 gaacgactgg caggtggggc agaccgggaa gatcgtcgcg ccggagctct acatcgcgct
     2401 ggggatcagc ggagcgatcc agcacctggc ggggatgaag gacagcaagg tcatcgtggc
     2461 gatcaacaag gacgaggagg ccccgatctt ccaggtggcg gactacgggc tggtggccga
     2521 cctcttcaag gcggtgccgg agatggtcgc ggagctgaaa aaactgaaat cggcctgata
     2581 ttatccggac cggttgagat aaaggtacga atgacgaagg gagggaccga aaggagcatg
     2641 gccgacatcc ggagcgagaa aggtctgctg tcccgcatca aggcgaagaa cttcaccgcg
     2701 gcgatcgtgg gtatgggata tgtcgggctt ccgttggcga tggagtacgc cgacgcgggg
     2761 atcccggtca tcggcatcga catcgacggg tccaaggttc gcgcgctgcg ggaggggaag
     2821 tcgtacatcg gggatgtccc gtccgaagcg gtgaaaagcg cggtcgatgc ggggctgttc
     2881 accccgacca cagactactc ggcggtcgga atggcggac
//
LOCUS       DATGYW010000382         3450 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_80290, whole genome shotgun sequence.
ACCESSION   DATGYW010000382 DATGYW010000000
VERSION     DATGYW010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3450
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80290"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2494)
                     /locus_tag="VK429_05300"
     CDS             complement(<1..2494)
                     /locus_tag="VK429_05300"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HLN91258.1"
                     /translation="MKAVVMAGGFGTRLRPLTEKLPKPMAHVANRPMMEHVVRLLAAE
                     GIDDLEVLLHFYPEKISTFFGDGTPWGVRMNYVNAEADYGTAGAVKNAEERLSGTFIV
                     ISADIITDFDLSKAIDFHKERGAAATIVLTRVPNPLQYGIVITEEDGRIVRFLEKPTW
                     GEVFSDTINTGIYIVEPEVLGLIPPKKNWDFSKNLFPAMLARGDRLVGYVAEGYWKDV
                     GNLDEYLNVHLDLLAGKVKIAFEGEKAGERNVWIGEGSKVDYTAELSNVLLGKKCAVG
                     SGVTMSNVVIGDGCVVEDGAVIQSSVLWERVSVGKGARVFENIVGSDVQVGRGAFLAE
                     RAVISDYCVIGTEAVVKPNVKVWPHKVVEDGAVLASSLIWGEKWTRSLFGAYGIVGLA
                     NIEISPEFAAKVGAAYAATFGRKVVLSTSRDSHKASRMINRSIMTGMLSVGVDVHDYG
                     VTPLPVVRFLSRSHGEERGGVHIRKSPFNASFIDMKFFDDSGLDLSMGQEKNIENLFF
                     REDFVRADIEDTGAITFPVGGFDFYVDGFVKSVDARAIKERNYNIVLDYSYGSAAVIF
                     PRILGQLGVDTVALNAILDPARITRSQEEFDKGMGHLATISRSLSADFGAMLDTGGEK
                     IFLVDEKGDILSDATALQVICLLACRQAGKGLVGVPVTASRNVEKIAARFGMDVVRTR
                     TLARSLMETAAREGVAFAGDGAGGFVFPHFQPAFDGMFAIVKIMELLAAEGRGLSDLL
                     REIPPTVLIHRKIPCAWENKGSLMRMLTGHAKGKPGQFIDGVKVFEGEDWALVYPSQD
                     EAYFHLVVESGDARAAERLASEYTDLFASWGKK"
     gene            complement(2525..3202)
                     /locus_tag="VK429_05305"
     CDS             complement(2525..3202)
                     /locus_tag="VK429_05305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003544651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HLN91259.1"
                     /translation="MDFGHPAAIFVSSFIIGLSGAMMPGPLLAVTIRHASIRGFSAAP
                     LLVLGHAILEAALVCLLLFGLMEWIRGDAAIIAIALLGSAMLLRMAAGMAREVRTLHF
                     GAAAGGSPGGRNDGKGSGGVRPVIDGIVTSASNPYWSLWWATIGLGYLLLSRGQGWRG
                     VLAFFSGHILSDAAWYLFVGGAVSAGRGWFTDRIYRGVVGACAVFLVFFALTFGYLGV
                     SRLFHIL"
     gene            3188..>3450
                     /locus_tag="VK429_05310"
     CDS             3188..>3450
                     /locus_tag="VK429_05310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008870703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HLN91260.1"
                     /translation="MTEIHSKIYSTNRRPAWIREAGGIPLAGRNPLPTADVVIEVGDR
                     IVLVRRKHPPPGWAIPGGFVEIGETVETAAIREALEETGLRVTL"
BASE COUNT          628 a         1212 c         1051 g          559 t
ORIGIN      
        1 gcttcttccc ccaggacgcg aacaggtccg tgtactccga tgcgagccgc tccgccgcgc
       61 gggcgtcccc ggactctacc acgaggtgaa agtacgcctc gtcctggctc gggtagacaa
      121 gtgcccagtc ctccccctcg aataccttca ccccgtcgat gaactggccc ggcttcccct
      181 tggcgtgccc ggtcagcatc cgcatgaggg atcccttgtt ctcccatgcg caggggatct
      241 tccggtggat caggacggtc ggcgggatct cgcgcaggag gtcggacagt cccctcccct
      301 cggccgccag aagttccatg atcttcacga tggcgaacat gccgtcgaag gccggctgga
      361 agtgcgggaa gacgaacccg cccgctccat ctcccgcgaa cgcgaccccc tccctcgccg
      421 ccgtttccat cagcgaccgc gccagcgtcc gcgtccggac cacgtccatc ccgaagcgcg
      481 ccgcgatctt ctccacgttc cgcgaggcgg tgaccgggac acccaccagc cccttgcccg
      541 cctggcggca ggcgaggagg cagatcacct gaagcgccgt cgcgtcggag aggatgtccc
      601 ccttctcgtc caccaggaag atcttctctc caccggtgtc gagcatcgcg ccgaagtcgg
      661 cggacaggga gcgcgagatc gtcgcgaggt gccccatccc cttgtcgaac tcctcctgcg
      721 accgggtgat gcgtgccggg tcgaggatgg cgttcagcgc caccgtatcc accccgagct
      781 gtccgaggat cctggggaag ataactgcgg cggagccgta ggagtagtcg agcacgatgt
      841 tgtagttccg ctccttgatc gcccgcgcgt cgacagattt cacgaacccg tcgacgtaga
      901 aatcgaaccc tcccaccggg aaggtgatcg ccccggtatc ctcgatgtcg gcccggacga
      961 agtcctcccg gaagaagagg ttctcgatgt tcttctcctg ccccatcgac aggtcgaggc
     1021 cggaatcatc gaagaacttc atgtcgatga aggaggcgtt gaacgggctc ttccggatat
     1081 ggacgccgcc ccgctcctcc ccatgggagc gcgaaaggaa acgcaccacc gggaggggcg
     1141 tgacaccgta gtcgtgcacg tcgacaccta ccgagagcat ccccgtcatg atcgagcggt
     1201 tgatcatccg cgatgccttg tggctgtccc ggctggtgga gaggaccacc ttccttccga
     1261 acgtggcggc gtaggcggcc cctaccttcg ccgcgaactc gggggagatc tcgatgttcg
     1321 ccagcccgac gatcccgtag gcgccgaaga gggagcgcgt ccacttctcc ccccagatga
     1381 gggaagacgc caggaccgcc ccgtcctcga ccactttgtg gggccacacc ttcacgttcg
     1441 gcttgaccac ggcttccgtc ccgatgacac aatagtcgct gatcaccgcc ctctccgcga
     1501 ggaaggcgcc gcgccccacc tggacgtcgg atccgacgat gttctcgaag acccgggccc
     1561 cctttcccac cgacacgcgt tcccacagca cggaggactg gatgaccgcc ccgtcctcga
     1621 cgacgcatcc gtctccgatc acgacgttgc tcatcgtcac cccggatccg acggcgcact
     1681 tcttcccaag gaggacgttg gacagctccg ccgtgtagtc gaccttcgac ccctcgccga
     1741 tccagacgtt ccgctccccc gccttctccc cttcaaaggc gatcttcacc ttccccgcga
     1801 ggagatcgag gtggacgttc aggtattcgt cgagatttcc cacgtccttc cagtaccctt
     1861 ccgcgacgta tccgaccagg cgatcgcccc gggccagcat ggcgggaaag aggttcttgc
     1921 tgaagtccca gttcttcttc ggggggatga ggccgagcac ttcgggctcg acgatgtaga
     1981 tccccgtatt gatcgtatcg gagaagacct ccccccacgt cggcttctcg aggaagcgga
     2041 cgatccgtcc gtcctcctcg gtgatcacga tgccgtactg cagcgggttg gggacgcgcg
     2101 tcaggacgat ggtggccgcc gccccgcgtt ccttgtggaa gtcgatcgcc ttcgacaggt
     2161 cgaagtcggt gatgatgtcc gcgctgatca cgatgaaggt cccggagagc ctctcctcgg
     2221 cgttcttcac cgccccggcg gtgccgtaat ccgcctcggc gttcacgtag ttcatccgga
     2281 ccccccaggg agtcccgtcc ccgaagaaag tgctgatctt ctccggatag aagtggagca
     2341 gcacctcgag gtcgtcgatc ccctcggcgg ccagcagccg gacgacgtgt tccatcatcg
     2401 gccggttcgc cacgtgcgcc atcggcttgg gaagtttctc cgtcaacggg cgaagcctcg
     2461 tcccgaaccc tcccgccatc acgaccgcct tcatgtcgat gcctccatgg tggaaatgcg
     2521 cccgctacag gatgtggaaa agacgcgaca ccccgaggta cccgaaggtg agggcgaaga
     2581 agacgagaaa gacggcgcag gcgccgacga cgccgcggta gatccggtcg gtaaaccagc
     2641 cccgccccgc cgaaaccgca cccccgacga agaggtacca cgccgcgtcg gacaggatgt
     2701 gcccggagaa gaaggcgagg acgccccgcc atccctgccc ccgcgaaagc agcaggtacc
     2761 cgaggccgat cgtcgcccac cagagcgacc agtacggatt cgaggcggag gtgacgatcc
     2821 cgtcgatcac gggacgcacc ccgcccgaac ccttcccgtc gttccgccct cccggggaac
     2881 ctcccgcagc ggcgccgaaa tggagcgtgc gaacctcccg ggccatcccc gccgccatcc
     2941 ggaggagcat cgcggagccg agcagggcga tcgcgatgat cgccgcgtct ccccggatcc
     3001 actccatcaa cccgaacagg agaaggcata cgagcgccgc ctcgaggatc gcgtgcccga
     3061 ggacgagcag cggcgcggcg gaaaacccgc ggatcgaggc gtgccggatg gtgaccgcga
     3121 ggaggggacc cggcatcatc gccccggaga ggccgatgat gaaggatgag acgaagatcg
     3181 ccgcgggatg accgaaatcc atagtaaaat ttatagcaca aatcgtcgcc cggcatggat
     3241 ccgggaggct ggaggaatcc ccctggcagg ccgcaatccc ctccccaccg ccgacgtcgt
     3301 catcgaggtg ggagaccgca tcgttctggt ccgtcggaag cacccccccc cggggtgggc
     3361 gatccccgga gggttcgtcg agatcggtga aaccgtcgaa accgcggcca tccgggaggc
     3421 gctcgaggag acgggactgc gcgtgaccct
//
LOCUS       DATGYW010000383         1587 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_80327, whole genome shotgun sequence.
ACCESSION   DATGYW010000383 DATGYW010000000
VERSION     DATGYW010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80327"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /locus_tag="VK429_05315"
     CDS             complement(<1..327)
                     /locus_tag="VK429_05315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91261.1"
                     /translation="MAPYREQTVEIALGPKGAFENGNIGTLKRRAPPDQVLSAVPPGR
                     GEPKSLREPKTPRVVELLRKAVEWKALLESGELVSQADIARQEGITRARVTQILGMLR
                     LALEIRE"
     gene            614..853
                     /locus_tag="VK429_05320"
     CDS             614..853
                     /locus_tag="VK429_05320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91262.1"
                     /translation="MGDAVKKTISLPPDLAEDAERVAKLEGKSLSAVIQDALRLSRRQ
                     RLSGEWKGMQGYWSARAREKGLLKEDDLDRFLRRR"
     gene            850..1272
                     /locus_tag="VK429_05325"
     CDS             850..1272
                     /locus_tag="VK429_05325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007221504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative toxin-antitoxin system toxin component,
                     PIN family"
                     /protein_id="HLN91263.1"
                     /translation="MKVVFDSNILIAALLFPGGRAEAAVANILDGVDDLVISRPIIQE
                     ILSVLASKFSRDKEELSRVAVVLGEMGQIVEPSRRLSVLRDEPDNRILECAVEGNAEA
                     IVTGDKAMLAIGEYEGIRLVTLADYLKKPRRGGKGGEG"
BASE COUNT          297 a          455 c          500 g          335 t
ORIGIN      
        1 ttcccggatc tccagcgcga gccgtagcat acccaagatc tgggtcaccc gtgcccgggt
       61 gatcccttcc tgccgggcga tatcggcctg actgaccaac tcgccggatt ccaggagtgc
      121 cttccattcg acggcttttc ggaggagttc gactactcgg ggggtcttcg gttcccggag
      181 cgatttgggt tcaccccgcc cgggggggac cgcgcttagc acctggtcag gcggtgcccg
      241 tcgcttcagc gtgccgatat tcccgttttc aaacgccccc ttaggcccga gggcgatctc
      301 gaccgtttgt tcgcggtagg gggccacggg tgccccactt tggccatcct gggctatgtg
      361 gacgatccgg aaccagacct ccggttcgat ccatccgggg cgggatctaa tactgttaca
      421 cttggggagc cagcactgtt ccgagcccgt ggatggggtt ttcccccgac cgcgggcttt
      481 ttacctttcc aaggaccctc cgtttcccga acctcccgtt actccccttg cgtgcgtccg
      541 atattcgtgg caggatcaag cttggtgtga aatattcaca ccggcatccc gacgttcaag
      601 gagggtttcg aacatgggcg atgcggtgaa gaagaccatc tcccttcccc ccgatctcgc
      661 cgaagacgcc gagcgggtcg ccaaattgga agggaagagc ctgagcgcgg tcatccagga
      721 cgccctgcgg ctctcgaggc gtcagcggct cagcggcgaa tggaagggga tgcagggata
      781 ctggagtgcc cgcgcgcggg aaaagggact tctgaaagag gacgatcttg accggttcct
      841 gcgccggcga tgaaggtcgt tttcgactcc aatatcctga tcgcggcgtt gctattcccg
      901 ggagggcgtg ccgaagctgc ggtggcaaac attctcgacg gagtcgacga tctcgtcatc
      961 tcgcgcccta tcatccagga aatcctgtcg gtgctggcgt cgaaattctc gcgtgacaag
     1021 gaagaactca gccgcgtggc ggtcgtcctc ggagagatgg ggcagatcgt ggagccttcc
     1081 cgccgcctgt ccgttttgcg ggatgaaccg gataaccgga tcctggaatg cgccgtcgaa
     1141 ggcaatgctg aggcgatcgt cacgggggat aaagcaatgc tggctatcgg ggaatacgag
     1201 ggaatccggc tggtgacgct cgccgattac ttgaagaaac caagacgcgg tgggaagggc
     1261 ggcgaaggtt aagaagatca agatcggaat caacagcatc aggtggggtt gatcgaccgg
     1321 cgtgcggcgc gtcacgttgg cgaccgggtc attcttggac gttcccttat gttccgcgga
     1381 gatttccaat gtctgttcgc ggtaggcggc cacccgggcg cggttgtcgg ctatctgggc
     1441 gttatgcaga atccggaagc agacgtcagg ttcgaccagc ccgggacggg atcgcatact
     1501 ggcacatttg gggatatctt caagattcga tctaacctgt taatggttaa cacttttttc
     1561 cgcgtacccc tatggtacac gccaaac
//
LOCUS       DATGYW010000384         2462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_182581, whole genome shotgun sequence.
ACCESSION   DATGYW010000384 DATGYW010000000
VERSION     DATGYW010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182581"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1382)
                     /locus_tag="VK429_05330"
     CDS             complement(<1..1382)
                     /locus_tag="VK429_05330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020588015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLN91264.1"
                     /translation="MNAPSLPPHRGIAGRIAAAFIGSRLTPLVIIASILLGVGAVLLL
                     PREEEPQIVVPMVDVFVRMPGASANEVENRVTRPMEKLLWEIPGVEYVYSTTSPGQSM
                     AIVRFKVGEDEEKSIVRLNQKMSANFDLIPPGATKPLVKPRSIDDVPILAITLSSARH
                     DPFSLRRIAQQLHDQVKSVPDVSEVKIIGGQRRQVRVLLDPARMAARGVAPGALVAML
                     QQANRRLPSGSIVAGNREFLVETGGFLRTAEDVGQVVAGVSGGRPVYLRDVAQILDGP
                     EEPADYVLFGTGPAARASGPAVHPAVTLSVAKRKGTNAIEVADKVLAKVEALKGILVP
                     GDVTLTVTRNYGETAAEKSNELLLHMLIAVVSVSILIWFTLGFREAGIVATAIPVTLA
                     LTLTVFYLTGYTLNRVTLFALIFSIGILVDDAIVVVENIVRHYRLPENRGRSVSDIAV
                     EAVDEVGNPT"
     gene            complement(1379..>2462)
                     /locus_tag="VK429_05335"
     CDS             complement(1379..>2462)
                     /locus_tag="VK429_05335"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HLN91265.1"
                     /translation="GAAVSRPVVKDVEVVVVRPVPRDTMAEALGTVRARTTAAVAPQV
                     MGRLTGVAVSEGSVVAAGALLATIDDTTVRAQLSSAEGAVAEADAAREEVDRAISQAE
                     AAKALAEKTLERYRKLLEGKVVTQQEFDEVEMRRTVAVKEFERTQQKRAQVSGKIAQA
                     EGQADAAKAMFAWTRVIAPFAGVIVEKRADAGSMAVPGVPLFVLEDPRRHYIEASVSE
                     TYLPLLRKGTPVRVVLDADPATPFTVAVTEIVPAIDPASRTFKVKADLPAGRSRSGQS
                     GKVRFAAGEGTVLAVPKRAITRAGGSDGVFTVGGADNVARLSMITLGAEFDDRVEVLS
                     GIEDGARIALSPIDKLSDGARVEVRR"
BASE COUNT          388 a          899 c          800 g          375 t
ORIGIN      
        1 atcgtcgggt tcccgacctc gtccaccgcc tccacggcga tgtcgctcac ggagcgcccc
       61 cggttctccg gaagccggta gtggcgtacg atgttctcga ccacgacgat cgcatcgtcc
      121 acgagaattc cgatggagaa gatgagcgcg aagagcgtta cccggttcag cgtgtaccct
      181 gtgaggtaga agacggtgag ggtgagggcg agggtcacgg ggatggccgt cgcgacgatc
      241 cccgcctccc ggaagccgag ggtgaaccag atgaggatcg acaccgaaac gaccgcgatc
      301 agcatgtgaa ggaggagttc gttcgacttc tccgcggccg tctcgccgta gttccgcgtt
      361 accgtgaggg tgacgtcacc cgggacgaga atccctttca gcgcctctac ctttgcaagg
      421 accttgtcgg ccacctcgat cgcgttggtg cccttccgct tggcgacgga gagggtcacc
      481 gcggggtgca ccgcggggcc gctcgcgcgc gccgccggcc cggtcccgaa gaggacgtag
      541 tcggcgggct cctccggtcc gtccaggatc tgcgccacgt cacgaaggta gacgggccgc
      601 ccccccgaga ctcccgccac cacctggccc acgtcctcgg ccgtgcggag gaacccgccc
      661 gtctcgacga ggaactcccg gttcccggcg acgatgctcc ccgagggaag ccggcggttc
      721 gcctgctgca gcatggcgac gagggcgccc ggggcgacgc cgcgcgccgc catccgggcc
      781 gggtcgagga gcacacgcac ctggcgtcgc tggccgccga tgatcttcac ctccgagacg
      841 tccgggaccg atttcacctg gtcgtggagc tgctgcgcga tccgccgcaa cgagaacggg
      901 tcgtgacggg cggaggagag cgtgatcgcg aggatcggca cgtcatcgat ggagcgcggc
      961 ttgacgagag gcttcgttgc gccgggcggg atcaggtcga agttggcgga catcttctgg
     1021 ttcaggcgga cgatgctctt ctcctcgtcc tcgcccacct tgaaccggac gatcgccatc
     1081 gactgcccgg gcgacgtcgt ggagtagacg tactccactc ccgggatctc ccacagaagc
     1141 ttctccatcg gccgggtgac ccgattctcc acctcgttcg ccgaggcccc gggcatccga
     1201 acgaagacgt cgaccatcgg caccacgatc tgcggctcct cctcccgcgg gagaagaagc
     1261 acggcgccca cgccgagcag gatcgacgcg atgatcacca ggggggtgag gcgggatccg
     1321 atgaaggcgg cagcgatccg cccggcgatc ccgcgatggg ggggcaacga aggggcgttc
     1381 accggcggac ctccacccgc gccccgtcgg agagcttgtc gatcggcgac agggcgatcc
     1441 tcgccccgtc ttcgattccg gagaggactt ccacccggtc gtcgaattcc gcaccgaggg
     1501 tgatcatcga aaggcgcgcc acgttgtctg cgcccccgac ggtgaacacg ccgtcggagc
     1561 cacccgcgcg ggtgatggcc cgtttcggga ccgcgagaac cgtcccctcc ccggcggcga
     1621 agcgcacctt gccggactgg cccgaccggg accggcccgc cggcagatcc gccttcacct
     1681 tgaaggtgcg gctcgccgga tcgatcgcgg gaacgatctc cgtgacggcg accgtgaacg
     1741 gggtcgcggg atcggcgtcg agaaccaccc ggaccggcgt ccccttcctc agcaacggaa
     1801 ggtatgtctc ggaaacggac gcctcgatgt agtgacggcg cggatcctcc aggacgaaga
     1861 gggggacgcc ggggacggcc atcgaccccg cgtcggcccg cttctcgacg atcacccccg
     1921 cgaagggggc gatcacccgg gtccaggcga acatcgcctt cgccgcgtcg gcctggcctt
     1981 ccgcctgggc gatcttcccg ctcacctgcg ccctcttctg ctgcgtccgc tcgaattcct
     2041 tcaccgccac ggtacgccgc atctccacct cgtcgaactc ctgctgcgta accaccttcc
     2101 cctcgagcag tttcctgtac cgttcgagcg tcttctccgc gagggccttc gcggcctccg
     2161 cctgggagat ggcgcgatcg acctcctcgc gtgccgcatc cgcttccgcg accgcccctt
     2221 ccgccgagga gagctgcgcg cgtaccgtcg tgtcgtcgat cgtcgccagg agcgcccccg
     2281 ccgccaccac ggaaccttcc gagaccgcga cgccggtcag acgccccatc acctgcggcg
     2341 ccaccgcggc ggtcgtccga gcccggaccg tccccagcgc ctccgccatc gtatcccgcg
     2401 ggacaggccg tacgacgacc acctccacat ccttgaccac gggacgcgaa accgccgccc
     2461 cc
//
LOCUS       DATGYW010000385         2077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_408980, whole genome shotgun sequence.
ACCESSION   DATGYW010000385 DATGYW010000000
VERSION     DATGYW010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408980"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..286)
                     /locus_tag="VK429_05340"
     CDS             complement(<1..286)
                     /locus_tag="VK429_05340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91266.1"
                     /translation="MRFPWYRLLPWFFLPIGLIGGLGCAQKLPVDEGRMVIALPGAPV
                     NVDPRVATDAYGEQILQMTHASLVGRDGAGDPLPDLAQRWESPDPRTYVFH"
     gene            complement(339..461)
                     /locus_tag="VK429_05345"
     CDS             complement(339..461)
                     /locus_tag="VK429_05345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91267.1"
                     /translation="MERSPGLMISLANLAALRQRIRIEEAALAEIVASVDGVPV"
     gene            505..1122
                     /locus_tag="VK429_05350"
     CDS             505..1122
                     /locus_tag="VK429_05350"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HLN91268.1"
                     /translation="MHIRTGLLLAILVVGFFPSSAGAAPAEPVPATIRGACDVAFLIT
                     STLHDVPGSARCLPFEAVLVRDAAGRQVIPSVEVDVPVAGMDTRNTTRDGKMRDMFHS
                     EQFPRIHAAARDVDVDRLRVETGKGREGNASIDLLLRIRDMERKVRALASNLKESGDR
                     VTFDLEFPVSLGEFDLKAPSVLGIIRVGDKVSVKATFTLTVSRSR"
     gene            1156..>2077
                     /locus_tag="VK429_05355"
     CDS             1156..>2077
                     /locus_tag="VK429_05355"
                     /inference="COORDINATES: protein motif:HMM:NF012421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III polyketide synthase"
                     /protein_id="HLN91269.1"
                     /translation="MTVWIHRIDTLLPDFSFAQEAAMVKMQEWARDDRERRLVRAVYR
                     HSGIDRRHSVLRNFDGEGEGEGAFFRRDAGGALRGPGTAARNDIFSAESRAMSVALAR
                     KVIGSCPGVTPADVTHVVTVSCTGFYNPGPDYYIVRELGMSDATQRYHLGFMGCYAAF
                     PALRMAAQFCAADPSAVILVICLELCSLHLQLNGSEDNLLANSLFADGAGAAIVSARE
                     PDPGTSAYRLVGFRSALVPAGEQDMTWRIGDQGFDIALSSYVPKLIGSNIRELVGPAL
                     AAGGLSLSDVDTWAIHPGGKSIIDQLQRTLG"
BASE COUNT          345 a          674 c          683 g          375 t
ORIGIN      
        1 ggtggaatac atacgtccgg ggatcgggcg actcccaccg ttgcgcgagg tcggggaggg
       61 gatcaccggc gccatcgcgg ccgacgaggg aggcgtgcgt catctggagg atctgctcgc
      121 cgtaggcgtc ggtcgccact cggggatcga cgttcaccgg tgcccccggc agcgcgatca
      181 ccatccgccc ctcgtcgacc ggcaatttct gcgcgcaacc caatcctccg atcagtccga
      241 tcggcaggaa gaaccagggg agaaggcgat accacgggaa ccgcatgatg agatggtatc
      301 accgaaaatg agacctccac gggtaccggc gcatcgcgct acaccggaac cccgtccacc
      361 gacgcgacga tttccgccaa cgccgcttcc tcgatccgga tccgctgtcg aagggcggcg
      421 aggttggcga gggagatcat caatccagga ctcctttcca tgacttccgc atctaatatg
      481 ataatggaga aggggttacc cgggatgcac atccgcacgg ggctgctgct ggcgattctg
      541 gttgtggggt tttttccttc ctccgccggt gccgctccgg cggaaccggt tccggcgacg
      601 atccggggag cgtgcgatgt cgctttcctc atcacgtcca ccttgcacga cgttcccggc
      661 tccgcccgtt gtctgccctt tgaggcggtc cttgtccgcg acgccgcggg caggcaggtc
      721 atcccgtccg tggaagtgga cgtgccggtg gcagggatgg acacgcggaa cacgacccgc
      781 gacgggaaga tgcgtgatat gttccattcg gagcagtttc cgcgaatcca cgcggcggcc
      841 cgtgatgtgg atgtcgaccg actccgggtg gaaaccggaa agggccgcga gggaaatgcc
      901 tccatcgacc tgctcctccg gatccgggac atggagcgga aggtacgcgc cctggcgagc
      961 aacttgaagg agtccggcga ccgggtcacc ttcgacctcg agttccccgt gtcgctcggg
     1021 gagttcgatc tgaaagcccc ctccgtcctc gggatcatac gtgtcgggga caaggtctcc
     1081 gtcaaggcca ccttcaccct gaccgtttcc cgatcccgtt gatacgcatc caacaataat
     1141 tagacggagg aacccatgac cgtctggatc caccggatcg acacgctgct ccccgatttc
     1201 tccttcgccc aggaggcggc gatggtgaag atgcaggagt gggctcgcga cgaccgggag
     1261 cggcgcctgg tgcgcgccgt gtaccggcac tcgggaatcg accgccgcca ctccgtcctc
     1321 cgcaacttcg acggtgaggg ggagggggag ggcgccttct tccggcgcga cgccggtgga
     1381 gcgcttcgag gccccgggac cgccgcccgc aacgacatct tttcggccga gtcccgtgcg
     1441 atgtcggtgg cgctggctcg gaaggtgatc gggagctgtc ccggggtcac ccccgccgac
     1501 gtgacgcacg tcgttaccgt gtcgtgcacc gggttctaca atcccggacc cgactactac
     1561 atcgtgcgcg agctggggat gtccgacgct acgcagcggt accatctcgg cttcatgggg
     1621 tgttatgccg ccttccccgc cttgcggatg gccgcccagt tctgcgcggc ggacccgtcc
     1681 gccgtgatcc tcgtgatctg cctcgagttg tgcagcctcc acctgcagtt gaacggatcg
     1741 gaggacaacc tgctggcgaa ctcgctattc gccgatgggg cgggcgccgc gatcgtttcc
     1801 gcccgggagc cggatccggg aacgtccgcg taccggctgg tcggttttcg ttccgcgctg
     1861 gttcccgccg gcgagcagga tatgacgtgg cggatcgggg accaggggtt cgacatcgcc
     1921 ctgtcgagct acgtgccgaa actcattggc tcgaacatcc gtgaattggt cggacccgca
     1981 ctcgccgccg gggggctgtc cctgtcggac gtcgatacgt gggcaatcca ccccggggga
     2041 aagtcgatca tcgaccaatt gcagaggacg ctcgggc
//
LOCUS       DATGYW010000386         3691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_27470, whole genome shotgun sequence.
ACCESSION   DATGYW010000386 DATGYW010000000
VERSION     DATGYW010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3691
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27470"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..472)
                     /locus_tag="VK429_05360"
     CDS             complement(<1..472)
                     /locus_tag="VK429_05360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014267814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HLN91270.1"
                     /translation="MKPTTADIRNVAIIAHVDHGKTTLVDAMLRQSGIFSAHAAVVDR
                     VMDSLDLEREKGITIMAKNTAVIYRGVKINIVDTPGHADFGGEVERTLKMVDAVLLLV
                     DASEGPLPQTRFVLKKALELGLPPIVVVNKIDRPDARPNEVLNEVFDTFVELGAS"
     gene            complement(486..1046)
                     /locus_tag="VK429_05365"
     CDS             complement(486..1046)
                     /locus_tag="VK429_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007527298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91271.1"
                     /translation="MLKKEDCVLYSGGAVGAEAEFGAQAERYGIEEINFTYEGRDIAR
                     SRGVRVLSREELGRGDVSLAYVSRLLNRSYTDAPTIRKVLQTIWYQVNSGHEVYVIGA
                     VLPDGTVKGGTGWGAEFAKLCNKPIFVFDQGKDAWLTWKDDRWVEPEGGQAIRIGNPC
                     FAGTGTRFLEENGRKAIRELFARSFA"
     gene            1187..2668
                     /locus_tag="VK429_05370"
     CDS             1187..2668
                     /locus_tag="VK429_05370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005993333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HLN91272.1"
                     /translation="MTLAPAPLPIAKGKKEIALLPGMANRHGLIAGATGTGKTVTLRV
                     LAEQFSAIGVPVFLADVKGDLSGIARPGGDNPKVVERAAQLKLDGFEYQGFPVAFWDL
                     FGEQGHPVRATVSEMGPLLLGRILNLNDIQSGVLNLVFRIADDNGMLLLDLKDLRSMA
                     QFVGDNADTFRTSYGNIAAASVGAIQRGLLGVEEQGGDRFFGEPALDLQDLLQTDPAG
                     RGMINILAASRLMTSPRAYSTFLLFLLSELFEQLPEVGDPQKPGLVFFFDEAHLLFTD
                     APKPLLEKIEQVVRLVRSKGVGVYFVTQNPMDIPERVLGQLGNRVQHALRAFSPNEQK
                     AVKAAAETFRKNPKLDVVKTITELGVGEALVSVLDAKGTPSVVERAFILPPRSRLTPL
                     SPEERAQVVRDSVLHGHYEKAVDRESAYEKLKEKAAQRQAEESAGGAVPGEASKGRRA
                     PEKRSETGVMIGAMVKSAAHAIGSQLGRQIIRGVLGSILGGKR"
     gene            complement(2701..>3691)
                     /locus_tag="VK429_05375"
     CDS             complement(2701..>3691)
                     /locus_tag="VK429_05375"
                     /inference="COORDINATES: protein motif:HMM:TIGR00786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HLN91273.1"
                     /translation="AVVTVLVCTFFTTFTGASGVTIVALGGILLPALLVEGYPERFSL
                     GLLTSSGSLGLLFPPCLPVILYAVVAGIAVDKMFLGGFLPGILLSLIMAGWAVRGGVR
                     AGARRTPFSWKELGAAAWEAKWDLLLPVIVLVGIFGGVATAVEAAAITVLYAIGTEAF
                     LHRDAGFRRLLSEAGTETSRLVGGFLLLLAAATGLTGYMVDAGVPQILFEWVRSTIDS
                     RFTFLLVLNVFLLLVGAFMHIFSAIVIVVPIIAPLAAAFGVHPVHLGIIFLANLELGF
                     LMPPVGMNLFMSAYRFEKPFGEVCRAVLPFLLLLLAGVLAITYIPWLTTALLP"
BASE COUNT          671 a         1198 c         1266 g          556 t
ORIGIN      
        1 cgctggcacc aagctcgacg aaggtatcga atacctcgtt cagtacctcg ttgggacgcg
       61 cgtcggggcg gtctatcttg ttgacaacga cgatgggcgg gagccccagt tccagggctt
      121 tcttgagcac gaagcgggtc tgcggaaggg ggccctcgga ggcgtccacg agcaggagca
      181 ccgcgtcgac cattttcagc gtccgctcca cctcgccgcc gaaatcggcg tggccggggg
      241 tatccacgat gttgatcttg acgccccggt agatcacggc ggtattcttc gccatgatcg
      301 tgatcccctt ctcccgctcg agatccaggg agtccatcac ccggtcgacg acggccgcgt
      361 gggcgctgaa gatgccgctc tgccgcagca tcgcgtcgac cagggtggtc tttccgtggt
      421 cgacgtgggc gatgatcgcg acgttgcgga tgtcggcggt ggtcggcttc atgagggggg
      481 aatctttacg cgaaggagcg cgcgaagagc tcccggatcg cttttcggcc gttctcttcg
      541 aggaagcggg ttcccgtccc ggcgaagcag gggttgccga tgcggatcgc ctgcccgcct
      601 tccggctcga cccaccggtc gtccttccag gtgagccagg cgtccttccc ctggtcgaag
      661 acgaagatcg gcttgttgca cagcttggcg aactcggccc cccacccggt gccgcccttg
      721 accgtcccgt cggggaggac cgcgccgatc acgtagacct cgtggccgga gttgacctgg
      781 taccagatcg tctgcaggac cttccggatc gtgggggcgt cggtgtagct ccggttgagg
      841 agccgcgaca cgtaggcgag gctcacgtcc ccgcggccca gctcctcccg ggagaggacg
      901 cggacgccgc gggagcgggc gatgtcgcgg ccttcgtacg tgaagttgat ctcctcgatc
      961 ccgtaccgtt ccgcctgcgc gccgaactcc gcctcggcgc cgacggcacc gccgctgtag
     1021 aggacgcaat cctccttttt cagcatcttc gtctccttgg aatggtcggg tgaataccgg
     1081 acactatacc acgaagggaa cgggatcgcg gtacttcgaa tcgtctccct gtgatgtact
     1141 atggaagggt tcgcagttgt cttcacgaca cgccaggagg tggcagatga cgctcgcacc
     1201 ggcgccgctc ccgatcgcca agggaaagaa ggagatcgcg ctgctccccg ggatggccaa
     1261 ccggcacggc ctgatcgccg gagccacggg caccggcaag accgtcacgc tgcgggtgct
     1321 ggcggagcag ttcagcgcga tcggcgtccc agtcttcctg gcggacgtga agggggacct
     1381 gtccgggatc gcgcggccgg ggggcgacaa cccgaaggtc gtcgaacggg cggcgcaact
     1441 caagttggac gggttcgaat accaggggtt tcccgtcgcc ttctgggatc tcttcgggga
     1501 gcaggggcac cccgtgcgcg ccaccgtctc ggagatgggc cctctcctcc tcgggcggat
     1561 cctgaacctg aacgacatcc agtccggcgt cctgaacctc gtcttcagga tcgcggacga
     1621 caacggcatg ctgctactgg acctgaagga cctgcgctcc atggcgcagt tcgtcgggga
     1681 caatgccgat acgttccgga cctcgtacgg caacatcgcc gccgcgagcg tcggggcgat
     1741 ccagcggggg cttctcgggg tggaggagca gggaggggac cgattcttcg gcgagcccgc
     1801 gctcgacctg caggacctcc ttcagaccga tccggccggc cgcgggatga tcaacatcct
     1861 cgccgcatcc cggctcatga cctcccccag agcctactcc acgttcctgc tcttcctgct
     1921 ctccgagctg ttcgagcagc tccccgaggt gggggacccg caaaagcccg gtctcgtctt
     1981 cttcttcgac gaggcgcacc tgctcttcac ggacgcgccg aagccgctcc tcgaaaagat
     2041 cgagcaggtg gtgcggctcg tccgctcgaa aggcgtgggg gtgtacttcg tcacccagaa
     2101 tccgatggac attccggagc gggtcctcgg gcaacttggg aaccgggtgc agcacgcctt
     2161 gcgggcgttt tcccccaacg agcagaaggc ggtcaaggcc gccgcggaga cgttccggaa
     2221 gaacccgaag ctcgatgtcg tgaagacgat caccgagctc ggcgtcgggg aggcgctcgt
     2281 ctccgtcctg gacgcgaagg ggaccccgtc cgtggtggag cgcgccttca tcctgccgcc
     2341 ccgaagccgg cttacccccc tctcccccga ggagcgggcc caggtcgtgc gcgattcggt
     2401 gctccacggg cattacgaaa aggcggtgga tcgggagtcc gcctacgaga aactgaagga
     2461 gaaggcggcg cagcggcagg cggaggaaag cgcgggcggg gcggtcccgg gggaggcctc
     2521 gaaggggagg cgtgcccccg agaaacggtc cgaaaccggg gtgatgatcg gggcgatggt
     2581 caagagcgcg gcccacgcca tcggcagcca gctcgggcga cagatcatcc ggggggttct
     2641 gggctccatc ctgggcggca agcgctgacc ggggcggaga ggaatagtca caggcaggca
     2701 ctaaggcagc agcgcggtgg tcagccaggg aatgtacgtg atggcgagga cgccggccag
     2761 caggaggaga aggaagggaa ggaccgcccg gcacacctcg ccgaacggct tttcgaaccg
     2821 gtacgcggac atgaagaggt tcatccccac cgggggcatc aggaacccga gctcgaggtt
     2881 cgcgagaaag atgatcccca ggtggaccgg gtgcacgccg aacgccgcgg cgagcggagc
     2941 gatgatcgga accacgatca cgatcgccga aaagatgtgc atgaaggccc cgacgaggag
     3001 caggaacacg ttcaggacaa gaaggaaggt gaagcgggag tcgatcgtcg agcggaccca
     3061 ttcgaaaagg atctggggaa ccccggcgtc gaccatgtat cccgtgaggc ccgtggccgc
     3121 cgcgaggagg aggaggaacc ccccgacgag ccgggaggtt tcggtccccg cttcggacag
     3181 gagccgccga aaccccgcgt cacggtggag gaacgcctcg gtgccgatcg cgtagaggac
     3241 cgtgatcgcc gccgcctcga cggcggtcgc gacccccccg aaaatgccca ccagcacgat
     3301 tacggggagg aggaggtccc acttcgcctc ccacgccgcc gcgcccagct ccttccagga
     3361 gaacggcgtc cgccgcgccc ccgcgcgcac ccctccccgg acggcccagc ccgccatgat
     3421 caacgaaaga aggatcccgg ggagaaaccc gccgaggaac atcttgtcca ccgcgatccc
     3481 cgccacgacc gcgtacagga tcaccggcag gcaggggggg aaaagaagcc cgagggaccc
     3541 ggacgaggtg agaaggccga gggagaacct ctccgggtac ccctccacga ggagcgcggg
     3601 cagcaggatc ccgcccagcg ccacgatcgt gaccccggag gcgccagtaa aggtcgtgaa
     3661 gaaggtgcac accagcaccg tgaccacggc g
//
LOCUS       DATGYW010000387         2782 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_182719, whole genome shotgun sequence.
ACCESSION   DATGYW010000387 DATGYW010000000
VERSION     DATGYW010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2782
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182719"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..852
                     /locus_tag="VK429_05380"
     CDS             <1..852
                     /locus_tag="VK429_05380"
                     /inference="COORDINATES: protein motif:HMM:NF024488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HLN91274.1"
                     /translation="WGGSSVTMTTSADDGKTWTPARRLITTPFFNLGTLVKGTPFLYD
                     DGTLGVPVYHEMIGKFGELLRLDKTGAVIDKQRLSSGNDSLQPVVLAQSDRNATVLMR
                     YAGKQPPKRVLRVSTDDAGQHWSHPEKSALSNPGAALSGVVLADGRVLVALNDVEGNR
                     DQLSLVASRDGGVTWKTVITLENQPGVRGHPLDRARYLEIAEALARDSDATLSDPAGH
                     ARAAAAQMCRGAGCGFEFSYPYLIQARNGEFHLVYTWNRSFIKHLRFNQAWLDQRSGE
                     TGNDQRH"
     gene            836..1447
                     /locus_tag="VK429_05385"
     CDS             836..1447
                     /locus_tag="VK429_05385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91275.1"
                     /translation="MINVTDLTGLAGATLALTASLPLAPPIRRLKRIHIGMLMGAAAI
                     VVAAPIGPLPLAAYARGWFGDLSVTTNVLLVIGIFPHLSGRRLVDRGQETAICRLVAV
                     TALVFYPLALGLGPFDPYRLGYGSPWFLTGLLTLALGAWIGRFHLITTCIALAVLAHA
                     MAWNESTNLWDYLLDPLVSIYAIFVVLSGVVRAVARSGGRNAC"
     gene            1545..2264
                     /locus_tag="VK429_05390"
     CDS             1545..2264
                     /locus_tag="VK429_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015838078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HLN91276.1"
                     /translation="MREYLKLDGRVAVVTGGARGIGLAITRALVDHGVRVHVFDVAPG
                     KGADPPPYAFHPVDISDSASVANAVANLPPGVSLLVNNAGITRDRSMVNMSDDEWDSV
                     LSVNLTGAFHVIRALAPAMRKAGYGRIVNITSINGIRGKFGQANYCASKAGLIGLTKT
                     LARELGPKGITVNAVAPGMVMTDMARTLPPEFVDKAKAEAVLPELATPEDIANTVLFL
                     LSDAARMITGEVIRVDAGQYI"
     gene            2261..>2782
                     /locus_tag="VK429_05395"
     CDS             2261..>2782
                     /locus_tag="VK429_05395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015838076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HLN91277.1"
                     /translation="MMRIDFHVHMGVYTFHNPSVTEWMKETHPEGYEEYIRKYDDPGA
                     FEELLAAEGVDYACVLAELSPATTGLCTNEQVRDFCRGRRRLIPFCDISPNLFTDLGG
                     ELRRKVEDEGFRGVKLYPSYQHYYPNEQRMYPLYQAAQDLGIPVLFHIGSSVFRGTRM
                     KYCDPLHLDDVAVD"
BASE COUNT          481 a          884 c          907 g          510 t
ORIGIN      
        1 tggggcggca gttccgtcac aatgacgacc tcggcggacg acgggaagac atggactccg
       61 gcgcgacggt tgatcacgac cccgttcttc aatttgggca cgctggtcaa gggcacgccg
      121 ttcctctacg acgacggtac gctcggggta ccggtctatc atgaaatgat cggaaaattc
      181 ggcgaactgc ttcgtctgga caaaacgggc gcggtcatcg acaaacaacg gttaagttcc
      241 ggaaacgaca gcctgcaacc ggtggtcctg gcgcaaagcg atcgcaacgc caccgtcttg
      301 atgcgatacg cgggcaagca gcccccgaaa cgcgtcctcc gagtttcaac cgatgacgcg
      361 gggcagcact ggtcccaccc cgaaaaatcg gcattgtcca atccgggcgc ggcgctctcc
      421 ggtgtcgtgc tggccgacgg aagagtcctg gttgccctga acgatgtcga gggtaaccgg
      481 gaccagttgt cgctcgttgc ctcccgcgac ggaggcgtaa catggaaaac cgtaatcacc
      541 ctggaaaatc agcccggagt gcgcggccac cccctggatc gggcacggta ccttgaaata
      601 gcggaggcgc tcgcaaggga ttcggatgca accctgtccg accccgccgg ccatgcccgt
      661 gcggccgctg cccagatgtg caggggtgcg gggtgcggat tcgaattttc ctatccgtat
      721 ctgatccagg ctcgaaacgg ggaatttcac ctggtgtaca cctggaaccg gtcgttcatc
      781 aagcacctcc gattcaacca ggcgtggttg gatcagcggt cgggcgaaac gggaaatgat
      841 caacgtcact gatcttaccg gactggcagg cgccaccctc gctctcacgg catccttgcc
      901 gctggcgccc ccgatccgcc gcctgaagcg catccacatc gggatgttga tgggtgcggc
      961 cgcgatcgtc gtggcggcac ccatcggtcc gctaccgctg gcggcctatg cacgcggctg
     1021 gttcggcgac ctgagcgtca ccaccaacgt gctgctcgtg atcgggatct tcccgcacct
     1081 gtccggccgg cgtcttgtcg atcggggaca ggagaccgcg atctgtcgcc tggtcgccgt
     1141 caccgccctg gtcttttacc cgctggcgct gggactcggg ccgtttgatc cctatcgcct
     1201 cgggtacggt tccccctggt tcctgacggg gttgctcacg ctggcgctgg gcgcctggat
     1261 tggcaggttc cacctgataa cgacctgcat cgcccttgcc gtgctcgccc atgcgatggc
     1321 ctggaacgaa tcgacgaatc tctgggacta tctgctcgat ccgctcgttt ccatctacgc
     1381 gattttcgtg gtgctttcag gcgtagtgcg ggccgtcgcc cgttccggcg gccgcaacgc
     1441 ttgttgacgc ccactttggg cgcggtccgc acggggtttt gttgtatctt gcattgaacg
     1501 tgtcctggcg gtgaggtgca tccatgtcga cggacggggg agccatgcgg gagtatctga
     1561 aactcgacgg gagggtggcg gtggtcacgg gcggtgcccg cgggatcggg ctggcgatca
     1621 cccgggcgct ggtcgatcac ggcgtgaggg tgcacgtgtt cgacgtcgcc cccgggaagg
     1681 gtgccgatcc tcctccgtac gcgttccacc cggtcgacat ttccgactcc gccagcgtgg
     1741 cgaacgccgt ggcgaatctt ccgcccggcg tctccctgct cgtgaacaac gccggcatca
     1801 cccgcgaccg cagcatggtc aacatgagcg acgacgagtg ggactcggtc ctgtcggtca
     1861 acctgacggg ggcgttccac gtgatccgcg cgctggcgcc ggcgatgcgg aaggccgggt
     1921 acggccggat cgtcaacatc acctcgatca acgggatccg cgggaagttc ggccaggcga
     1981 actactgcgc ctccaaggcg ggcctgatcg ggctgacgaa gaccctggcg cgggaactgg
     2041 gtcccaaggg gatcacggtg aacgccgtcg ccccgggcat ggtcatgacc gacatggcgc
     2101 ggacgcttcc gccggaattc gtcgacaagg cgaaggcgga ggccgttctc ccggagctgg
     2161 ccactcccga ggatatcgcg aacacggtcc tgttcctcct gtccgacgcg gcgcgcatga
     2221 tcaccggcga agtgatccgg gtcgacgccg gccaatacat atgatgcgaa tcgatttcca
     2281 cgtccacatg ggggtgtaca ccttccacaa tccgtcggtg acggagtgga tgaaggagac
     2341 gcaccccgaa gggtacgagg agtacatccg gaagtacgac gaccccgggg cgttcgagga
     2401 actgctggcg gccgaggggg tggactacgc ctgcgtgctg gccgagctga gtcccgccac
     2461 gaccggtctg tgcacgaacg agcaggtgcg cgatttctgc cggggccgcc gccgcttgat
     2521 ccctttttgc gacatcagcc ccaacctgtt caccgacctc gggggcgagc tgcggcggaa
     2581 ggtcgaagac gaggggttcc ggggggtgaa gctctatccc tcgtaccagc actactaccc
     2641 gaacgaacag aggatgtacc cgctgtacca ggcggcgcag gatctgggga tccccgtcct
     2701 cttccacatc gggtcgtcgg tcttccgcgg gacccggatg aagtattgcg acccgctgca
     2761 cctcgacgac gtggcggtcg at
//
LOCUS       DATGYW010000388         2198 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_344369, whole genome shotgun sequence.
ACCESSION   DATGYW010000388 DATGYW010000000
VERSION     DATGYW010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_344369"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /locus_tag="VK429_05400"
     CDS             <1..208
                     /locus_tag="VK429_05400"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011685662.1"
                     /note="catalyzes the interconversion of alpha-D-glucose
                     1-phosphate to alpha-D-glucose 6-phosphate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoglucomutase, alpha-D-glucose
                     phosphate-specific"
                     /protein_id="HLN91278.1"
                     /translation="EAMLTTAPGNGAAIGGLKVVTANGWFAARPSGTEDVYKLYAESF
                     LGADHLRKIQEEAQALVARVLSSA"
     gene            complement(296..1210)
                     /locus_tag="VK429_05405"
     CDS             complement(296..1210)
                     /locus_tag="VK429_05405"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HLN91279.1"
                     /translation="MTWIRIKSGMGILLPFGLLLLFVAGCGPSQKEMMAKDQMDRTKK
                     AYAEAKANPNVAAYAPMELQEAGKAVQEAEKAKEPEDILQMGYIAERKTQFAVTTADG
                     KVAEREIDKLNVKKAEMNARKQTLEAERAKQEAGKAMSEAERARMAAAAEAERAAKAK
                     AESDQLMKELANLKAQQTERGIVLTIGDVLFATGKADLSANANKSVATLAEFLRRNPN
                     RNVLIEGHTDSVGKDDYNLALSRKRADSVKDKLVEYGIEAGRITAVGYGKTFPVASND
                     TKAGKAQNRRVDVVILNEGVKAESQIRK"
     gene            complement(1245..1643)
                     /locus_tag="VK429_05410"
     CDS             complement(1245..1643)
                     /locus_tag="VK429_05410"
                     /inference="COORDINATES: protein motif:HMM:NF025704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4398 domain-containing protein"
                     /protein_id="HLN91280.1"
                     /translation="MDGKKRRIQQAFVGVAILGLLFAAGCGSSNIMTAQTSGEKVMQA
                     GNAYMQAKDGNASLNAKDDLARAEGKLMKARDAFTKKNYDEAANLADQAAVDAEYAKA
                     RATTNKNLAIAEGIKKETNDLRQEIERMSK"
     gene            1854..>2198
                     /locus_tag="VK429_05415"
     CDS             1854..>2198
                     /locus_tag="VK429_05415"
                     /inference="COORDINATES: protein motif:HMM:NF013071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HLN91281.1"
                     /translation="MKRIPPATVVWFRRDLRLSDNPALEAAVARGGPVVATWVHAPGE
                     EGDSVTGAAARVFLHDALRSLAESLEARGGRLVLRRGSTIKALIDLARETGADAVYAN
                     KAWDPPLFARDAK"
BASE COUNT          317 a          768 c          628 g          485 t
ORIGIN      
        1 cgaggcgatg ctcacgaccg cccccgggaa cggcgccgcg atcgggggcc tgaaggtggt
       61 caccgcgaac ggctggttcg ccgcccgccc ctcggggacc gaggacgtct acaaactgta
      121 cgccgagagc ttcctcggcg cggaccacct gcgcaaaatc caggaggagg cccaggccct
      181 cgtcgcgcgg gtcctctcct ccgcttgatc cttccaataa aaacggagag ggcgggggac
      241 cccccgccct ctccgaccgc tgatccccag gggatcccct ggcgggatgc gccggttact
      301 ttcgaatctg gctctcggcc ttgacccctt cgttcaggat gacgacatcc actcgacgat
      361 tctgcgcctt gccggccttg gtgtcgttgc tggccacggg gaacgtcttt ccatacccga
      421 cggcggtgat ccggcctgct tcgatcccgt actccaccag tttgtctttc accgaatccg
      481 ctctcttccg ggaaagggcc aggttgtagt cgtccttccc gacgctgtcc gtgtggccct
      541 cgatcagcac gttccggttc ggattcctcc ttaaaaattc ggccagggtg gccacgctct
      601 tgttcgcgtt cgccgacaga tccgccttgc cggtggcaaa cagcacgtcc ccgatcgtca
      661 ggacgatccc cctctccgtc tgctgggcct tgagattcgc aagctccttc atgagctggt
      721 cggattcggc cttcgccttg gcggccctct ccgcctcggc cgccgctgcc atccgggccc
      781 tctccgcctc gctcatcgcc tttcccgctt cctgcttcgc gcgctccgcc tccagggtct
      841 gtttcctggc gttcatctcg gcttttttca cgttgagttt atcgatttcc ctctccgcca
      901 ccttgccgtc cgctgtcgtc acggcaaact gggtcttcct ctccgcgatg tagcccatct
      961 ggagaatgtc ttccggttcc ttcgccttct ccgcctcctg gacggccttg cccgcttcct
     1021 gcagctccat cggcgcatag gctgccacgt tcgggttggc cttcgcctcc gcgtaggctt
     1081 tcttggtacg gtccatctgg tccttggcca tcatctcctt ctgggagggg ccgcaccccg
     1141 cgacgaagag aagaagcaaa ccgaacggaa ggaggatgcc cattccgctt tttatccgga
     1201 tccatgtcat atgattcatc ttccgatccc tccgtggaga agtgttattt ggacatccgc
     1261 tcgatttcct ggcgcagatc gttggtctct ttctttatcc cttccgcaat ggccaggttc
     1321 ttgttggtcg tcgcccgggc cttggcgtac tccgcgtcga ccgcggcctg gtccgccagg
     1381 ttggcggcct cgtcatagtt cttcttggta aaggcgtccc tggctttcat gagtttccct
     1441 tccgcgcgcg caagatcatc cttcgcgttc agggacgcat tcccgtcctt ggcttgcatg
     1501 taggcattcc ccgcctgcat gaccttctcg ccggacgttt gggcggtcat tatgttcgag
     1561 gaaccgcatc cggccgcgaa cagcagcccg aggatcgcca cgccaacgaa tgcctgctgg
     1621 atccttcttt tcttcccgtc catcgaaacc tccttatccc acggatctga aacgcaggat
     1681 gtatattacc aggaatcgat gacttcacaa ggatgtcccc atttttcccc cgcaaatccg
     1741 atcacacgcc ggacagcaag accgggacct tcaccgaggg ttcccctcct ggtcaccggc
     1801 agattcggtg gcgctcccga cgactccggg aggcgacccg gtatactgag ccaatgaaaa
     1861 ggataccccc tgcgaccgtc gtctggttcc ggcgggacct gcgcctttcg gacaacccgg
     1921 cgctcgaggc ggcggtcgcg cggggcgggc cggtcgtcgc cacgtgggtg cacgccccgg
     1981 gggaggaagg ggattccgta acgggcgccg ccgcccgcgt cttcctccac gacgccctcc
     2041 gctctctcgc ggaatccctg gaagcgcggg gggggcgtct cgtgctgcgg cggggctcca
     2101 ccatcaaggc gctgatcgac ctggcgcggg agacgggggc cgacgcggtc tacgccaaca
     2161 aggcgtggga tccgccgctg ttcgcccggg acgcgaag
//
LOCUS       DATGYW010000389         2879 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_344382, whole genome shotgun sequence.
ACCESSION   DATGYW010000389 DATGYW010000000
VERSION     DATGYW010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2879
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_344382"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..471
                     /locus_tag="VK429_05420"
     CDS             169..471
                     /locus_tag="VK429_05420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012468776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HLN91282.1"
                     /translation="MSDERCCSGSGGILLAFLAGGLVGAGLALLYTPVSGREARERIG
                     GLAEDLKKKTEAWTGDVKQKVEGFIEEERSVIKSAYEAGREAMAKEKARFENPNPQ"
     gene            complement(544..1116)
                     /locus_tag="VK429_05425"
     CDS             complement(544..1116)
                     /locus_tag="VK429_05425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008146779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HLN91283.1"
                     /translation="MKTLKGSRTEHNLMAAFAGESQARNRYTFYAAIASKEGHEGIAS
                     NFLETAEHEKMHAKRYFELLEGLDVEIKAGYPSKIGSTAVNLEAAAAGEHEEWTNIYP
                     TFGKIAEEEGFAAPAAIFRRVAEVEVEHEKRYLRLLGHVKNGTLYKREKPIRWKCAKC
                     GRVHEGTDAPERCPTCAHPQGWFVPVEANY"
     gene            complement(1213..2073)
                     /locus_tag="VK429_05430"
     CDS             complement(1213..2073)
                     /locus_tag="VK429_05430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015722980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HLN91284.1"
                     /translation="MAETILAGVFALIDRLLPFAFAEPAFMKRALLALLLTAPAAAAL
                     GVPLVQHRMAFFSDAIGHSAFTGVALGVLLGVSPSWTMVAFGLLVAVAITLVKGRTEL
                     SSDTVIGVFFSTVVALGIAIISREKGLTRNLQAFLYGDPLAVTDAELLWMAALFLVVS
                     AYLAVLYNRILLLGIHEGFARTKGVRVPAVEISFALIVALVVTAAIHTVGILLVTALL
                     VIPAAAARNVARGAASALWVSVGIAVLSGFAGIVASWHLDTATGATVVLAAAACFAAT
                     ALYRGARPRE"
     gene            complement(2077..>2879)
                     /locus_tag="VK429_05435"
     CDS             complement(2077..>2879)
                     /locus_tag="VK429_05435"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HLN91285.1"
                     /translation="AAGPMTGSAHLHKLEIRNLTVRKGGVEILSGIDADLRCGEVTAL
                     VGPNGAGKTTLLLAILGQVPYTGEIRFCRAAEHGQGAPRIGYVPQRLPLDPDAPITVL
                     DFFALSAQRRPVFLGASRRTRDAARESLERAGVAHLLQSPLGRLSGGELQRVLFALAL
                     RDAPDILLLDEPVSGVDVAGEELFCDFLSKVQRDSRFSLLLVSHDLSVVTRHADRVIC
                     LNRRLVCSGATTEVLTPENLAAMYGADAHLFRHTHANGHGHLHDEGGT"
BASE COUNT          466 a          937 c         1048 g          428 t
ORIGIN      
        1 gcacctcacc gaggggatcc gctctctccg cggaccggtg gacgtggctt cgaaggtgtt
       61 cgagcacgcc ttctccccgg ccctggtcag cgcggcctcg gcactcgtgg gcttcaaggc
      121 ggcgacgtct cacattctcg atcggatcgt tcgaaagggg gtacggaaat gagcgacgaa
      181 aggtgctgtt ccggttccgg cgggatcctg ctggcgtttc tcgccggcgg gctggtcggc
      241 gcggggcttg ccctgctcta cacccccgtc tccgggcgcg aagcccggga gcggatcggc
      301 gggctggcgg aggatctgaa gaagaagacc gaggcatgga ccggcgacgt gaagcagaag
      361 gtggaggggt tcatcgaaga ggagcggtcc gtgatcaagt cggcgtacga ggccggccgc
      421 gaggcgatgg cgaaggagaa ggcccgcttc gagaacccga acccgcagta ggcggggggc
      481 tccccccgaa gagacgaagg gcggcaatcc cggcgcaacg gggttgccgc ccttcccttt
      541 tggtcagtag ttcgcctcga cggggacgaa ccacccctgc ggatgcgcgc aggtcgggca
      601 ccgttccggc gcgtcggtcc cctcgtggac ccggccgcat ttcgcgcact tccaccggat
      661 cggcttctcc cgcttgtaga gcgtgccgtt cttcacgtgg ccgaggagcc gcaggtaccg
      721 cttctcgtgc tccacctcga cctcggcgac ccggcggaag atcgccgcgg gtgcggcgaa
      781 cccttcctcc tcggcgatct tcccgaacgt cgggtagatg ttcgtccact cctcgtgctc
      841 gccggcggcg gcggcctcga ggttcacggc ggtgctcccg atcttgctcg ggtaccccgc
      901 cttgatctcc acgtccagcc cctcgagaag ttcgaaatac cgctttgcgt gcatcttctc
      961 gtgctccgcc gtctcgagga agttggaggc gatcccctcg tgcccttcct tcgaggcgat
     1021 cgccgcgtag aaggtgtacc ggttccgcgc ctgcgactcg ccggcgaatg ccgccatcag
     1081 gttgtgctcc gtgcgcgacc ccttcagcgt tttcatagat cctccgatcc ggtttgaatg
     1141 ttaagaggaa cgattgtcga caattataga gagatcccgt gcggcggcgc aacggaaaag
     1201 atcgacggcc gtttattctc tcgggcgggc gccccggtac agggcggtgg cggcgaaaca
     1261 ggccgcggcg gccaggacga cggtcgcgcc ggtggcggtg tcgaggtgcc aggaggcgac
     1321 gatccccgcg aatcccgaca gcacggcgat tcccacggag acccagaggg ccgaggcggc
     1381 cccccgggcg acgttgcggg cggcggcggc ggggatgacg agcagggcgg tgacgaggag
     1441 aatccccacg gtgtggatcg ccgcggtcac cacgagggcg acgatcagcg cgaaggagat
     1501 ctccacggcc ggaacgcgga ctcccttcgt ccgggcgaat ccctcgtgga tccccagcag
     1561 cagaatccgg ttgtagagga cggcgaggta cgcggaaacg accaggaaga gggcggccat
     1621 ccacagaagc tcggcgtcgg tgacggcgag cgggtcgccg tagaggaacg cctgcaggtt
     1681 ccgcgtcagc cccttttccc ggctgatgat cgcgatcccg agggcgacga cggtcgagaa
     1741 gaagacgccg atgaccgtgt cggacgaaag ttcggtgcgt cccttgacca gggtgatggc
     1801 gacggcgacg aggagcccga acgcgaccat cgtccaggag ggggagacgc cgaggagaac
     1861 cccgagggcc acgccggtga aggcggagtg gccgatcgcg tcggagaaga aggccatccg
     1921 gtgctggacc agcgggacgc cgagcgccgc ggcggcgggg gccgtgagga gcagcgcgag
     1981 gagcgcgcgc ttcatgaacg ccggttcggc gaaggcgaac ggcagcagcc ggtcgatcag
     2041 cgcgaacacg ccggcgagga tcgtttccgc caacccttac gtccccccct cgtcgtgcag
     2101 gtgcccgtgt ccgttcgcgt gggtgtggcg gaacaggtgc gcgtcggccc cgtacatcgc
     2161 ggccaggttc tccggggtga gcacctccgt ggtcgcgccg ctgcacacga ggcggcggtt
     2221 gaggcagatc acccggtcgg cgtgccgcgt caccaccgac aggtcgtggc tgaccagcag
     2281 gaggctgaag cgggagtcgc gctggacctt ggacaggaag tcgcagaaca gctcctctcc
     2341 cgcgacgtcg acgccggaga ccggctcgtc gagcagcagg atgtcggggg cgtcccgcag
     2401 cgcgagggcg aacagcaccc gctgaagctc cccgccggag agccgcccca gtgggctttg
     2461 gagcaggtgg gcgacgccgg cccgctcgag gctctcccgg gcggcatccc tcgtgcggcg
     2521 ggaggcgccg aggaagacgg ggcgccgctg ggcggagagc gcgaagaagt cgagcaccgt
     2581 gatcggcgcg tccgggtcca ggggaaggcg ctggggcacg tacccgatgc gcggggcccc
     2641 ctggccgtgc tccgccgcgc ggcagaaacg gatctccccc gtgtacggca cctggcccag
     2701 gatcgcaagg agaagggtgg tctttcccgc cccgttgggg ccgaccaggg cggtgacctc
     2761 cccgcaccga aggtcggcgt cgatccccga caggatctcc acccctccct tccggacggt
     2821 gaggttgcgg atctccagct tgtggagatg cgcactcccg gtcatcggtc cagcggcgc
//
LOCUS       DATGYW010000390         1724 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_463051, whole genome shotgun sequence.
ACCESSION   DATGYW010000390 DATGYW010000000
VERSION     DATGYW010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463051"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..806
                     /locus_tag="VK429_05440"
     CDS             <1..806
                     /locus_tag="VK429_05440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004512302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HLN91286.1"
                     /translation="RFCTSACPYKKVYFNWDSGKAEKCIHCFPRTETGQCMACAHSCV
                     GRIRYVGVLLYDAERVEQALLKADAELVDAHRAVILDPRDPAVRDAARKNGVSDQWLE
                     AAVRSPAHALVKEFGLALPLHPEFRTLPMAYYIPSLSPVLSTLGDSHELMEHGMFPEA
                     ETLRAPLSYLAGLLSGGNREVVAAVLAKLVALRAFMRARNLGQPIDPGVLERAGLTEA
                     AAVRLYRLFTIGGYDERNVIPSQQREEQDPYTRKGASGFGILKKAGRGK"
     gene            803..1357
                     /gene="narJ"
                     /locus_tag="VK429_05445"
     CDS             803..1357
                     /gene="narJ"
                     /locus_tag="VK429_05445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012468294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051131 - chaperone-mediated protein
                     complex assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HLN91287.1"
                     /translation="MSLAECYASLARMLDYPGGKEGIVADCGKVGEALQGRDLKSPLE
                     PFGRFVETSTLARLQEEYVATFDFNPAVALYLGHHLFGDHQKKGAYLIRLKQEFGRHG
                     FTPSGNELPDHLPLVLGFLAYLARNAEDGVRRSFVSECVLPGVERLGAAFSARGDSPW
                     KPVVEAARLLCAADSAVPEEGKPC"
     gene            1351..>1724
                     /locus_tag="VK429_05450"
     CDS             1351..>1724
                     /locus_tag="VK429_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012468295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HLN91288.1"
                     /translation="MLNVFLFIVLPYVALALFLIVTPYRYFSNRLTWSAYSTQFLEQK
                     YLYWGSNPWHYGVIPVLIAHLVSIVAPGPMRAILGNQRALILLEDIGQGLALLALFGC
                     LVLLIRRLKAPILGPVTSAGDWA"
BASE COUNT          295 a          527 c          564 g          338 t
ORIGIN      
        1 ggcgtttctg caccagcgcc tgcccttata aaaaggtgta cttcaactgg gacagcggga
       61 aagcggaaaa atgcatccac tgcttcccgc gcaccgagac ggggcagtgc atggcctgcg
      121 cccacagctg cgtcggccgg atccggtacg tcggggtttt gctgtacgac gcggaaaggg
      181 tcgagcaggc cctgctcaag gccgacgcgg agctcgtgga cgcccaccgg gccgtgatcc
      241 tcgatccacg cgatccggcg gttcgggatg cggcgaggaa gaacggcgtc tccgaccagt
      301 ggctggaggc ggcggtgaga tcgccggcgc atgccctggt caaggagttc gggctggcgc
      361 tgcccctcca tcccgagttc cggaccctgc cgatggcgta ttatattccc tccctgtccc
      421 ctgtcctctc cacattggga gattcccacg aattgatgga gcacgggatg tttcccgagg
      481 cggaaacctt gcgggcgccc ttgagttacc tggccggcct tctgtccggc ggcaaccggg
      541 aggtggtggc ggcggtactg gcgaaactcg tggccctgcg agccttcatg cgcgccagga
      601 acctcggcca gccgatcgat cccggtgttc tcgagagggc gggccttacc gaagccgcgg
      661 cggttcgcct ctatcggctg ttcaccatcg gggggtacga cgagcggaac gtcatcccgt
      721 cccagcagag ggaggagcag gatccataca cccgcaaggg ggcgagcggc ttcgggatcc
      781 tgaagaaggc ggggaggggg aaatgagcct cgcggaatgc tacgcctccc tggcccgcat
      841 gctcgattat cccggaggga aagaagggat cgtggcggac tgcggcaagg tgggcgaggc
      901 cttgcaaggg cgggatctaa aatccccgct ggagcccttc ggcaggttcg tggagacctc
      961 gaccctggca aggctccagg aggaatacgt cgcgaccttc gacttcaatc cggcggttgc
     1021 cctctatctg ggccaccacc tcttcggcga ccatcagaaa aaaggggcct acctgatccg
     1081 gctgaagcag gagttcggcc gccacgggtt tactccttcc ggcaacgaac tccccgatca
     1141 tctgccgctg gtgcttggat tcctggcata ccttgcaagg aacgcggagg acggcgtccg
     1201 gcgatccttt gtctcggaat gcgtgcttcc gggagtggaa cgacttggag ccgctttttc
     1261 cgcccgcggg gattctccct ggaagccggt tgtcgaagcg gcgagactcc tgtgcgccgc
     1321 ggactctgca gttccggagg agggcaaacc atgctgaatg tctttctgtt catcgtactt
     1381 ccctatgttg cgcttgcgtt gttcctgatc gtgaccccat accggtactt ctcgaaccgg
     1441 ctcacctggt cggcctattc cacgcagttc ctggaacaga agtacctcta ctggggaagc
     1501 aatccgtggc attacggcgt gattccggtg ctgatcgccc atctggtgag tattgtagca
     1561 cccggcccca tgagggcgat cctcggaaac cagcgagcct tgatccttct ggaggacatc
     1621 gggcaggggc tcgcgttgtt ggccctgttc ggttgcctgg tgctgttgat ccgtcgactg
     1681 aaagccccca tcctggggcc ggtgacctcc gccggggatt gggc
//
LOCUS       DATGYW010000391         1774 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_182993, whole genome shotgun sequence.
ACCESSION   DATGYW010000391 DATGYW010000000
VERSION     DATGYW010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182993"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="VK429_05455"
     CDS             <1..376
                     /locus_tag="VK429_05455"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLN91289.1"
                     /translation="GALWDSSVFPNRAPEGHALLRVMVGGVRASELAGLPEADLLAVA
                     RKELQEIMGISSEPDLAKTFFHDRGIPQYLVGHGKRLERIDTRLAVLPGLHLNSNAYR
                     GIALNDCVRESRGTAERIARTL"
     gene            complement(388..1194)
                     /locus_tag="VK429_05460"
     CDS             complement(388..1194)
                     /locus_tag="VK429_05460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015831474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005743 - mitochondrial inner membrane
                     [Evidence IEA];
                     GO_component: GO:0035632 - mitochondrial prohibitin
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HLN91290.1"
                     /translation="MAPKPGLIKFAAIAVVVFLIFSGSLVIIGPGQRGVVINFGAVSP
                     QVWDEGLHFKIPIYQRVEKMDVRVQKEQTEAAAASKDLQDTHSTIAVNFNILPDKAGW
                     VFQHIGRGYNERVIDPVTQEVVKAVTARYTAVELITNREKIRTEIKELLKARLLDYHI
                     AVVDVSIVNFKFSAQFTQAIENKQTAEQMALKASRDLDRIKIEAQQKIAAAQAEAESL
                     RLQRQNITSDLVELRRIEAMQQAIQKWNGVLPQVTGGAMPFIDAKSYTGK"
     gene            1469..>1774
                     /locus_tag="VK429_05465"
     CDS             1469..>1774
                     /locus_tag="VK429_05465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HLN91291.1"
                     /translation="MGHIRNGNGVYGRLQKRLDRFPIGAPPAAALYEILKRLYTEEEA
                     EIAARMPIKPIGLDGIARRTKKSPAELTLLLDRMADKGLVMDFVRDGMTSYMLSPTLL
                     "
BASE COUNT          275 a          590 c          593 g          316 t
ORIGIN      
        1 gggggcgctg tgggactcga gcgtcttccc gaaccgggcg ccggaggggc atgccctgtt
       61 gcgcgtgatg gtggggggag tgcgtgcttc ggagcttgcg gggctgcccg aggcggatct
      121 gctcgccgtc gcccggaagg agttgcagga gatcatgggg atctcctccg agccggacct
      181 cgcgaagacg ttcttccacg accgggggat cccgcaatat ctcgtcggcc acgggaagcg
      241 gctggagcgg atcgacaccc ggttggcggt gctccccggc ctgcacctca acagcaacgc
      301 ctaccggggc atcgccctca acgactgcgt ccgggagtcg cgcgggaccg ccgagcggat
      361 cgccaggacg ctctaggtcg cctcaagtta cttcccggta tacgatttcg cgtcgatgaa
      421 cggcatcgcc ccgccggtca cctgggggag cacgccgttc cacttctgga tcgcctgctg
      481 catcgcctcg atccgccgca gctctaccag gtccgaggtg atgttctgcc gctgcagccg
      541 cagcgactcg gcctccgcct gcgccgcggc gatcttctgc tgcgcctcga tcttgatccg
      601 gtcgaggtcc cggctcgcct tgagcgccat ctgctcggcg gtctgcttgt tctcgatcgc
      661 ctgggtgaac tgcgcgctga acttgaagtt gacgatggag acgtccacca cggcgatgtg
      721 gtagtcgagc agccgcgcct tcagcagctc cttgatctcc gtgcggatct tctcccggtt
      781 cgtgatcagc tcgacggccg tgtacctcgc cgtgaccgcc ttcacgacct cctgggtcac
      841 cgggtcgatg acgcgctcgt tgtacccgcg cccgatgtgc tggaagaccc accccgcctt
      901 gtcggggagg atattgaagt tgaccgcgat cgtggagtgg gtgtcctgca ggtccttgga
      961 ggccgccgcc gcctccgtct gctccttctg gacccgcacg tccatcttct cgaccctctg
     1021 gtagatgggg atcttgaagt ggagcccctc gtcccacacc tggggagaaa ccgcgccgaa
     1081 gttgatgacg accccgcgct ggccgggccc gatgatcacg agcgaaccgg agaagatcag
     1141 gaagacgacg accgcgatcg cggcgaactt gatcaggccg ggcttcggag ccatggaccc
     1201 acctcctggg acggtctttc cttgcgaaga ttgcgcctgt ccgagcgctt ccctgtaacg
     1261 gcgaaggagt tccgagaaat cgaggccggc cacgcggggc ctcccttccg cgacgccgac
     1321 cggtccgtcg gaacgccggc gccgccgttc cccgagactg taccgtaacc gcgggcgtgc
     1381 tgtccaatgg gtcctctgct atcctgaggg gaccggaacg gaggccaggc atcgcggggg
     1441 ccgcaacggt ttccggcagg ggggaaccgt gggacacatc cgcaacggga acggggtgta
     1501 cggacggctg cagaagcggc tggaccggtt ccccatcgga gcgccgccgg ccgcggcgct
     1561 ctacgagatc ctgaaacgcc tctacaccga ggaggaggcg gagatcgccg cccggatgcc
     1621 gatcaagccg atcggcctcg acgggatcgc ccggcgtacg aagaagtccc ccgccgaatt
     1681 gacgttgctc ctggaccgga tggcggacaa ggggcttgtg atggatttcg tgcgggacgg
     1741 gatgacctcc tatatgctct cgccgaccct cctc
//
LOCUS       DATGYW010000392         1662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_183025, whole genome shotgun sequence.
ACCESSION   DATGYW010000392 DATGYW010000000
VERSION     DATGYW010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183025"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="VK429_05470"
     CDS             complement(<1..655)
                     /locus_tag="VK429_05470"
                     /inference="COORDINATES: protein motif:HMM:NF023222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HLN91292.1"
                     /translation="MMNGAQYVESLKMLKPRIFYRGKQLDKPYDHPALAPHVRTAAAT
                     YDLAAGGQHDEVMTATSNLDGAKISRFTHLFWSVDDLIRKIAMLRLIGRETGTCFQRC
                     VGLDAINALWSVTYDVDQAKGTEYHQRFRTFLARLQREDLMSAGAMTDPKGDRSLAPW
                     QQADPDLYVHIVERGPDGVVIRGAKTHITGAANSHEIFVMPTLGLPPEGADYAVACAV
                     "
     gene            complement(652..>1662)
                     /locus_tag="VK429_05475"
     CDS             complement(652..>1662)
                     /locus_tag="VK429_05475"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase family protein"
                     /protein_id="HLN91293.1"
                     /translation="MISHRNTLFNVDSCRATLGYAEGDVGLLTLPLFHVTGLHSQLVA
                     LMACGATTVLQKEYDTGQVLERIARNRVTALFFVPAIYKLFTLRNDIGRYDLSSVRIA
                     AYGGAPMAPETIEELNRVMPARLHNCYGLTECSSLGTVLPSEYALTRSESVGFAVPGT
                     EAEVRGDGGGTLRPGEPGELFLRGPHIVQGYFGAPEKTREAIRDGWLKTGDIARIDGD
                     GFVYILDRAKDMINRGGEKIYSLEVENVLYMCPGVAEAAVFGIPHPVFGEVPAARLVP
                     LTGATIDPEKVRAFCRARLADYKVPVQVGIADRIPRNPGGKILKKELRREWESHSREE
                     AR"
BASE COUNT          240 a          595 c          540 g          287 t
ORIGIN      
        1 ggacggcgca ggcgaccgcg tagtcggctc cctccggcgg aagcccgagc gtgggcatca
       61 cgaagatctc gtgggagttc gccgcccccg tgatgtgcgt cttggcgccc cggatcacga
      121 ccccgtcggg cccccgctcg acgatatgga cgtacaggtc cgggtcggcc tgctgccagg
      181 gggcgagcga ccggtccccc ttcgggtcgg tcatcgcccc ggccgacatg aggtcctccc
      241 gctgcaggcg ggccaggaac gtccggaacc gctggtggta ctccgtcccc ttcgcctggt
      301 cgacgtcgta cgtcaccgac cagagggcgt tgatcgcgtc gagccccacg caccgctgga
      361 agcaggtccc cgtctcccgc ccgatgagcc gcagcatggc gatcttccgg atcaggtcgt
      421 ccacgctcca gaacaggtgc gtgaaccggg agatcttcgc cccgtccagg ttcgacgtgg
      481 ccgtcatcac ctcgtcgtgc tgtcctcccg ccgcgaggtc gtacgtcgcc gccgcggtcc
      541 ggacgtgggg cgcgagcgcg gggtggtcat acggtttgtc cagctgcttc ccgcggtaga
      601 agatcctcgg cttcagcatt ttcaggcttt ccacgtactg cgcgccgttc atcatcgggc
      661 ttcctcccgt gagtggctct cccactctct ccgtaattcc ttcttcaata ttttcccccc
      721 gggattccgc gggatccggt ccgcgatccc cacctggacc gggaccttgt aatccgcgag
      781 acgggcgcgg cagaatgccc ggaccttttc cggatcgatc gtcgcgccgg tcagcggaac
      841 caggcgggcc gccggcacct ctccgaacac ggggtggggg atcccgaaca ccgccgcctc
      901 cgcaaccccg gggcacatgt agaggacgtt ctccacctcg aggctgtaga tcttctcccc
      961 gccccggttg atcatgtcct tggcccggtc caggatgtag acgaatccgt ccccgtcgat
     1021 ccgggcgatg tccccggtct tgagccaccc gtcgcggatc gcttcccgcg tcttttccgg
     1081 cgcgccgaag tacccctgca cgatgtgggg cccccggagg aacagttcgc cgggctcccc
     1141 gggccggagc gtccctccgc cgtcgccgcg aacctcggcc tccgtccccg ggacggcgaa
     1201 cccgaccgac tcggaccggg tgagcgcgta ctccgacggg aggacggtcc ccagcgacga
     1261 gcactccgtc aacccgtagc agttgtggag ccgggcgggc atcacccggt tcagctcctc
     1321 gatcgtctcc ggcgccatgg gggcgccgcc gtacgccgcg atcctcaccg acgagaggtc
     1381 gtagcggccg atgtcgttcc ggagcgtgaa cagcttgtag atcgccggga cgaaaaagag
     1441 cgccgtgacg cggttccggg cgatccgctc gagaacctgc cccgtgtcgt actccttctg
     1501 cagcacggtg gtcgccccgc acgccatgag ggccaccagc tgggagtgga gccccgttac
     1561 gtggaagagc ggcagggtga gcagtccgac gtccccttcc gcatacccga gcgtggcgcg
     1621 gcaggagtcg acgttgaaca gggtgttccg gtgggagatc at
//
LOCUS       DATGYW010000393         2205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_463158, whole genome shotgun sequence.
ACCESSION   DATGYW010000393 DATGYW010000000
VERSION     DATGYW010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463158"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VK429_05480"
     CDS             <1..237
                     /locus_tag="VK429_05480"
                     /inference="COORDINATES: protein motif:HMM:NF015214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase C-terminal
                     domain-containing protein"
                     /protein_id="HLN91294.1"
                     /translation="EVGGLLEKYFAGKKGFSTEDKRKLCRYIEGMTSVSTLVEALHGA
                     GSPQAQRIVMLRQADLPEKMRQAKKVIGLGKDRK"
     gene            275..1708
                     /locus_tag="VK429_05485"
     CDS             275..1708
                     /locus_tag="VK429_05485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012648616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HLN91295.1"
                     /translation="MKAPVRNFKLYVAGKWVSEKESMPVIDKFTGETFANVPVASRET
                     TEGAIRAAHEAFPAWSRTPAHKRYKILSNVSRLLEERQEEIATIICREAGKAWKYSVG
                     EVSRSVETYRFSAGEAKRIHGETVPMDASFAGEGRVGYWLRVPLGVVSAITPFNFPLN
                     LVAHKVGPALAVGNTLVLKPASTTPLTAIVLGEILEEAGVPAGVFNVVVGSGGTVGEW
                     LTVDPRVSKISFTGSPPVGEQIIRKAGLKKVTMELGNNSGTIIEPDADLSAAVPRCVM
                     SAFANSGQVCISLQRLYVHKAIAKEFTKRFVEETKRLKVGNPLEKDCDVGPMIEEKEA
                     VRAEEWVKEAVREGAKVLIGGKREGRVMQPTVLVNVRTEMKVMCQEAFAPLVSIYEYG
                     KFEDAVAMVEDSPYGLQAGVYTNDLKKAMYAVDRINVGGVMINDTSIFRVDHMPYGGN
                     KLSGLGREGVRFACEEMTSIKMVMIKP"
     gene            1872..>2205
                     /locus_tag="VK429_05490"
     CDS             1872..>2205
                     /locus_tag="VK429_05490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015473867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HLN91296.1"
                     /translation="MPIELKLPDVGEGIAEGEVVRWLVAEGSAVKEDDLLVEILTDKA
                     NIELPSPVSGTFLKILAQPGQIVKVGEPIALIEPAAGQAAAAHRATASSDRPTPASSE
                     ATEPRQATP"
BASE COUNT          425 a          625 c          814 g          341 t
ORIGIN      
        1 gaggtgggcg gcctgctgga gaagtacttc gcggggaaga agggcttctc tacggaggac
       61 aagcggaagc tgtgccggta catcgagggg atgacgtcgg tgtccacgct ggtggaggcg
      121 ctgcacgggg ccggctcccc gcaggcgcag cggatcgtga tgctgcggca ggccgacctg
      181 ccggagaaga tgcgccaggc gaagaaggtg atcggcctgg gcaaggacag gaaataagcg
      241 aaagaagacg ctcgcgaaaa ggagagtccc cccaatgaag gctccggttc ggaatttcaa
      301 gttgtacgtc gccgggaagt gggtgtcgga gaaggagtcg atgccggtca tcgacaagtt
      361 caccggcgag acgttcgcga acgtgccggt cgcgtcgcgg gaaacgacgg agggcgccat
      421 ccgcgcggcc cacgaggcgt tcccggcctg gtcgcgcacg ccggcccaca agaggtacaa
      481 gatcctgtcg aacgtctccc ggctcctcga ggagcgccag gaggagatcg ccacgatcat
      541 ctgccgggag gctgggaagg cgtggaaata ttcggtgggc gaagtctccc ggtcggtcga
      601 gacgtaccgg ttctccgcgg gggaggcgaa gcggatccac ggggagacgg tgccgatgga
      661 cgcgagcttc gcgggcgagg ggcgggtcgg gtactggctg cgcgtcccct taggcgtggt
      721 ctccgcgatc acccccttca acttccccct caacctggtg gcgcacaagg tgggtcccgc
      781 gctggcggtg gggaatacgc tggtcctgaa acccgcttcc accacgccgc tgaccgcgat
      841 cgtgctgggc gagatcctgg aggaggcggg ggtacccgcc ggggtcttca acgtcgtcgt
      901 cgggtcgggg ggaacggtgg gcgagtggct gaccgtcgac ccgcgggtct cgaagatctc
      961 cttcaccggg tcgccccccg tcggggagca gatcatccgc aaggcgggac tgaaaaaagt
     1021 gacgatggag ctggggaaca actccggcac gatcatcgag ccggacgccg acctttcggc
     1081 ggcggtcccc cggtgcgtga tgagcgcctt cgccaactcg ggccaggtgt gcatctccct
     1141 gcagcgcctc tacgtccaca aggcgatcgc gaaggagttc acgaagcggt tcgtcgagga
     1201 gacgaagagg ctgaaggtgg gcaacccgct ggagaaggat tgcgacgtgg gcccgatgat
     1261 cgaggagaag gaggcggtcc gggcggagga gtgggtgaag gaggcggtcc gggagggggc
     1321 gaaggtgctg atcggcggga agcgcgaggg acgggtgatg cagccgacgg tcctggtcaa
     1381 cgttcgcacc gagatgaagg tgatgtgcca ggaggcgttc gcgccgctgg tctcgatcta
     1441 cgaatacggg aagttcgagg atgcggtggc gatggtcgag gattccccgt acgggctgca
     1501 ggcgggggtc tacaccaacg acctcaagaa ggcgatgtac gccgtggacc ggatcaacgt
     1561 cggaggggtg atgatcaacg acacctccat cttccgggtg gaccacatgc cgtacggcgg
     1621 gaacaagctc tccggcctgg ggcgcgaagg cgtccgcttc gcctgcgagg agatgacgag
     1681 catcaagatg gtgatgatca agccgtaacc ccctggaggg tctcttatcg cggggctgct
     1741 ttacagggcg cccaaggatc cggggaggaa ccttgcggcg tctttttcaa tggaataatt
     1801 gccatgacat ccagatttcg gaatatcatt tccggtagac gcgatcgcgt ctgaaagggg
     1861 catcgcaggc aatgccgatc gagttgaagc tccccgacgt gggggaaggg atcgcggaag
     1921 gagaagtggt ccgctggctg gtcgccgagg ggtccgcggt caaggaggac gacctgctgg
     1981 tcgagatcct gaccgacaag gcgaacatcg agcttccctc gccggtgagc ggaaccttcc
     2041 tgaagatcct tgcgcaacct ggacagatcg tgaaagtggg ggagccgatc gccctcatcg
     2101 agcccgcggc cgggcaggcc gccgcggcgc atcgcgccac ggcatcgtcc gatcgcccga
     2161 cccccgcatc cagcgaggcg acggaacccc gccaggcaac tcctt
//
LOCUS       DATGYW010000394         3633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_28264, whole genome shotgun sequence.
ACCESSION   DATGYW010000394 DATGYW010000000
VERSION     DATGYW010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3633
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28264"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="VK429_05495"
     CDS             complement(<1..269)
                     /locus_tag="VK429_05495"
                     /inference="COORDINATES: protein motif:HMM:NF014808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M17 family peptidase N-terminal
                     domain-containing protein"
                     /protein_id="HLN91297.1"
                     /translation="MRIDCVSADIRSVKADMVVVNLFEGTKRPGGAAAHVDAAIGGAI
                     AAAVRDGDFAGKLGETLSLRPSNGLSSPRVLVVGLGKKEKFTADHA"
     gene            complement(365..1069)
                     /locus_tag="VK429_05500"
     CDS             complement(365..1069)
                     /locus_tag="VK429_05500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014795191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN91298.1"
                     /translation="MLKVSGIDVFYGDLQVLWDVSFEVRDKEILVLVGANGAGKSTTL
                     KTISGLLKPRKGSIEFDGVRLDQLSPDKVIGQGVVHVPEARRLFREMSVEENLIMGSL
                     SPEAKKKRTQTMEWVYELFPRMKERRKQAAGTMSGGEQQMAAIGRGLMALPKVLMFDE
                     PSLGLSPILVQEVFEIAKRINREGVTVMLVEQNVRQTLAMCDRAYVLENGRVVLQGTG
                     KDLMADPHVKEAYLGI"
     gene            complement(1062..1781)
                     /locus_tag="VK429_05505"
     CDS             complement(1062..1781)
                     /locus_tag="VK429_05505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007781623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN91299.1"
                     /translation="MAYFQVDHLVKYFGGLAAVNGVTFEVAKGEIFGLIGPNGSGKTT
                     TFNMISGYHRPTSGRVLFEGGEIHRLPTHKICHLGIGRTFQVVKPLGRMTVLDNVIAA
                     AYSRVNTHHKAREEALKAIDFCGLMPVKDVLAKALPIAGRKRLEITRAMATRPKLLLL
                     DETAAGLNPSELVEAIDLIRKIRESGTTIIIIEHIMHVIMTISDRIHAINFGQTIAEG
                     TPKEVAANPAVIEAYLGTDYA"
     gene            complement(1792..2796)
                     /locus_tag="VK429_05510"
     CDS             complement(1792..2796)
                     /locus_tag="VK429_05510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN91300.1"
                     /translation="MKKNLLPLGIVALVAALPLVLEDNYYLHLMILFLMWVVIGSAWN
                     LIAGYTGQVSFGDAAFFGCGAYTAGLLATHLGVSTWWGLALGGFAAVAVGLPFGWICF
                     RMRGAYFALATLALNEVLRHVATIAEKFTGGMVGILIMPSFMSKVPYFYIALAMAVAS
                     LASLRWVVRSKPGYYFVSIREDQDAAESLGIDTHLYKMLSLAYAAFWTGIAGALYMNY
                     MGFIDPQVVFNLHDISIMAILVGIVGGVGTVYGPAVGAFVMVAVQELFRSGFFGLFKW
                     LGAVSGSSSLVKVAEVLTQAHVLGFGILVVLVILVLPNGIVGDWPKIRKRVFRLGAGA
                     "
     gene            complement(2806..>3633)
                     /locus_tag="VK429_05515"
     CDS             complement(2806..>3633)
                     /locus_tag="VK429_05515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011697187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN91301.1"
                     /translation="GLYALIGIGMTLIMGVMGIINLAHGQLMMLAMYVTFVLNTMGVD
                     PYISLFVAMPLLFLLGVAIQKFLLNPLIKADTILPENQVLMTVGIGMVATEIIRFAFT
                     SDYKYITSTYSNQTFFLGNISFSMALMIAFGIAIAFTVAMFFFLIKTDLGRSIRATAQ
                     DKDAATLMGVNTGRITVITFGLGAGLVAAAGCLLAPVYYIFPDLGGPFTAKAFIITIL
                     GGLGSTVGAIFGGVTLGLAESMGATYFGMEYEDIIGLTIFVLVLLFLPGGFKRLTKV"
BASE COUNT          681 a         1208 c         1139 g          605 t
ORIGIN      
        1 gcgtgatccg cggtgaattt ctccttcttc ccgagcccga ccacgagaac ccgcggggag
       61 gacaggccat tggagggacg gagggaaagg gtttccccga gcttccccgc gaagtcgccg
      121 tcgcggaccg ccgccgcgat cgcgcccccg atcgccgcat cgacgtgggc ggctgccccg
      181 ccgggccgct tcgtcccctc gaacaggttc accaccacca tgtccgcctt gaccgagcgg
      241 atgtccgcgg aaacgcaatc aatgcgcatc gatgtacccc ctgccgcaga tctcgggtcg
      301 ctgattacca tactgagggg ttcgcggggt tgtcaaggcg gcggacgcca gggagggagg
      361 gcgatcagat acccaggtag gcctctttca cgtgcgggtc ggccatgagg tccttcccgg
      421 ttccctgcag gacgacccgg ccgttctcca gcacgtaggc ccggtcgcac atcgccagcg
      481 tctggcggac gttctgctcc acgagcatga ccgtgacccc ctccctgttg atccgtttcg
      541 cgatctcgaa gacttcctgg acgaggatcg gggagagccc cagcgacggc tcgtcgaaca
      601 tcagcacctt cggcagcgcc atcaatcccc ggccgatggc ggccatctgc tgctccccgc
      661 cgctcatcgt cccggcggcc tgcttccgcc gctccttcat cctgggaaag agctcgtaga
      721 cccactccat cgtctgcgtc cgcttcttct tcgcctccgg ggagagggag cccatgatga
      781 ggttctcctc caccgacatc tcccggaaca ggcggcgcgc ctcggggacg tgcaccaccc
      841 cctgaccgat caccttgtcc ggggagagtt gatcgaggcg gacgccgtcg aactcgatgg
      901 accccttccg gggcttcagg aggcccgaga tcgtcttgag cgtggtcgat ttccccgccc
      961 cgttggctcc caccaggacc aggatctcct tgtcgcggac ctcgaacgag acgtcccaga
     1021 ggacctggag gtccccgtag aagacatcga tccccgatac cttaagcata gtcggtcccc
     1081 aggtaggcct cgatcaccgc cggattcgcc gccacctcct tcggtgtccc ctcggcgatc
     1141 gtctggccga agttgatcgc gtggatccgg tcggagatgg tcatgatcac gtgcatgatg
     1201 tgctcgatga tgatgatggt ggtgccgctc tcccggatct tccggatcag gtcgatcgcc
     1261 tccacgagtt cggacgggtt cagccccgcc gccgtctcgt cgagaaggag gagtttcggc
     1321 cgggtggcca tcgcccgggt gatctccaga cgctttcgcc cagcgatcgg cagcgccttg
     1381 gccagcacgt ccttgaccgg catgaggccg cagaaatcga tcgccttcag cgcctcctcc
     1441 ctcgccttgt gatgcgtgtt cacccgcgag tacgccgccg cgatcacgtt gtccaggacg
     1501 gtcatccgcc cgaggggctt gacgacctgg aaggtccgcc cgatccccag gtggcagatc
     1561 ttgtgcgtcg gcaaccggtg gatctccccc ccctcgaaga gcaccctccc ggaggtgggc
     1621 cggtggtagc cgctgatcat gttgaaggtc gtcgtcttcc cggagccgtt ggggccgatg
     1681 agcccgaaga tctccccctt cgccacctcg aaggtgaccc cgttcaccgc ggcaaggccc
     1741 ccgaaatatt tcaccagatg gtcgacctgg aagtacgcca tgccctcctc ctcaggcccc
     1801 ggcgccgagc cggaacaccc gcttgcggat tttcggccag tcgcccacga tcccgttggg
     1861 cagaacgagg atcaccagga ccaccaggat cccgaatccg aggacgtgcg cctgggtcag
     1921 gacctcggcg accttgacca ggctggaaga cccggagacg gcgcccagcc acttgaagag
     1981 gccgaaaaac ccggagcgga acaactcctg gacggcgacc atcacgaagg cgccgacggc
     2041 ggggccgtag accgtcccga cgccgcctac gatgccgacg aggatggcca tgatggagat
     2101 gtcgtgcagg ttgaagacga cctgggggtc gatgaacccc atgtagttca tgtagagggc
     2161 accggcgatc ccggtccaga aggccgcgta cgcaagggac agcatcttgt agaggtgcgt
     2221 gtcgatcccc aggctttccg ccgcatcctg gtcttcccgg atggagacga agtagtaccc
     2281 cggcttggag cgcacgaccc atcggagact ggcgaggctc gccaccgcca tcgccagggc
     2341 gatgtaaaag tagggaacct tcgacatgaa ggagggcatg atgaggatgc cgaccatgcc
     2401 gccagtgaac ttttccgcga tggtcgcaac gtgtcgcagg acctcgttca gcgccagcgt
     2461 cgccagcgcg aagtaggcgc cgcgcatccg gaagcagatc cacccgaacg ggaggcccac
     2521 cgcgacggcg gcgaaaccgc cgagggccag gccccaccag gtcgagaccc cgaggtgggt
     2581 cgccagcagg cccgcggtgt acgccccgca gccgaagaag gccgcatccc cgaacgacac
     2641 ctggccggtg tatcccgcga tgaggttcca tgccgacccg atgacgaccc acatcaggaa
     2701 gaggatcatc aggtgcaggt agtagttgtc ctccaggacc agcggaaggg ctgcgacgag
     2761 agcgacgatg ccgaggggga ggaggttctt cttcacggcg cgcccctaaa ccttcgtcag
     2821 gcgcttgaag ccgcccggga ggaagagaag cacgagcacg aagatggtca ggccgatgat
     2881 gtcctcgtac tccatgccga agtacgtcgc ccccatgctt tcggccagcc ccagcgtcac
     2941 ccccccgaag atggccccca ccgtcgaccc caggccgcca aggatggtga tgatgaaggc
     3001 cttcgccgtg aagggcccgc cgaggtcggg gaagatgtag tacaccggcg cgagcaggca
     3061 ccccgcggcg gccaccagtc cggcccccaa cccgaaggtg atcaccgtga ttcgccccgt
     3121 gttcacgccc atgagggtcg ccgcgtcctt gtcctgggcg gtcgcccgga tggagcgccc
     3181 taggtcggtc ttgatgagga aaaagaacat ggcgacggtg aaggcgatgg cgatcccgaa
     3241 cgcgatcatc agggccatgc tgaaggaaat attccccagg aagaaagtct ggttggaata
     3301 cgtgctggtg atgtacttgt agtcggaagt gaaggcgaac cggatgatct cggtcgccac
     3361 catcccgatc cccactgtca tgagcacctg gttctcgggg agtatcgtgt ccgccttgat
     3421 gagggggttc aggaggaact tctggatcgc cacgccaagc aggaacagga ggggcatggc
     3481 gacgaacagc gaaatgtacg ggtcgacccc catcgtgttg agaacgaagg tcacgtacat
     3541 cgccagcatc atcaactgcc cgtgagcgag gttgatgatc cccatcacgc ccatgatcag
     3601 ggtcatcccg atcccgatca gggcgtacaa ccc
//
LOCUS       DATGYW010000395         1685 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_409988, whole genome shotgun sequence.
ACCESSION   DATGYW010000395 DATGYW010000000
VERSION     DATGYW010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1685
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_409988"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..933
                     /locus_tag="VK429_05520"
     CDS             <1..933
                     /locus_tag="VK429_05520"
                     /inference="COORDINATES: protein motif:HMM:TIGR04085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPASM domain-containing protein"
                     /protein_id="HLN91302.1"
                     /translation="TPFSLRNPAISLVTSVPLVVREKAISFSLTTNGTLLTAGIARFL
                     MENRVSVCVSIDGPREVHDVNRPYASGLGSYDDVERGIAHLMENRRGYPMAARVTLGS
                     GAVDVRTTFRHLRGLGFDEVGFAPASAAEGSRTALTGEELDAVLDGFRGLAAEYVDDV
                     RERRMPAFSNLTQILGLIHRGDPMPYPCGAGIGMLAADPAGVLYPCHRLCGVGDPMGD
                     PSRGIAPDARARFLDGARRRRESGCDACWAKNFCAGGCYHDAYLRQGDLFAPSTHYCR
                     WIKELFLLGLRTYVRIQNETPTFLDAVLGERGIA"
     gene            930..1253
                     /gene="qhpC"
                     /locus_tag="VK429_05525"
     CDS             930..1253
                     /gene="qhpC"
                     /locus_tag="VK429_05525"
                     /inference="COORDINATES: protein motif:HMM:NF037958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinohemoprotein amine dehydrogenase subunit
                     gamma"
                     /protein_id="HLN91303.1"
                     /translation="MKHLKGVNRKGKKIEKGKADLPVVEAQGSIPFMHTCTSVFNPGY
                     EIDWTGSTKQLCTPIETDLFGTTDMYCWWPGQAPDTYNNPDWNADCTRAMKDWMKLKV
                     VKPEW"
     gene            1307..>1685
                     /locus_tag="VK429_05530"
     CDS             1307..>1685
                     /locus_tag="VK429_05530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91304.1"
                     /translation="MKRTVFFALVLLGTTLLLASGNAPALGKDILLQGMLHNRFNVLD
                     GDKDEIVATIETRGKKVTNFTWDPRDLDKIYTITDWGQQIEQLDLKGKKVVRAFRMGS
                     GDLKVRALDIELNPVNPNLLYALS"
BASE COUNT          322 a          538 c          562 g          263 t
ORIGIN      
        1 acgccgttct ccttgaggaa cccggcgatc tccctggtca cgagcgtgcc gttggtggtg
       61 agggagaaag cgatctcttt ttccctcacg accaatggca cgctcctgac cgccgggatc
      121 gcgcggttcc tcatggagaa ccgcgtctcc gtgtgcgtca gcatcgacgg cccccgcgag
      181 gtccacgacg tcaaccgccc ttacgcgtcg gggctaggct cctacgacga cgtggagcgg
      241 gggatagcgc acttgatgga aaaccggcgc gggtatccga tggcggcgcg cgtgaccctg
      301 gggagcggcg ccgtcgacgt gcggacgacg ttccggcacc tccgcggcct cgggttcgac
      361 gaggtgggat tcgcaccggc cagcgctgcg gaggggagtc gcaccgcgct taccggggaa
      421 gaactcgacg cggtgctgga cggattccgg ggtctggcgg cggaatacgt cgacgatgtg
      481 cgggaacgcc ggatgccggc gttctcgaac ttgacacaga tcctcgggtt gatccaccgc
      541 ggggatccga tgccgtaccc gtgcggggcg ggaatcggga tgctggccgc cgaccccgcg
      601 ggggttctct acccgtgcca ccggctctgc ggggtcggag accccatggg cgacccgtcc
      661 cgcgggatcg ctccggatgc ccgcgcccgg ttcctcgacg gcgcgaggcg gcgccgcgag
      721 tccggatgcg acgcctgctg ggcaaagaac ttctgcgccg ggggatgcta ccacgacgcg
      781 tacctccgtc agggggacct cttcgccccc tcgacacact attgccgctg gatcaaggag
      841 ctgttccttc tgggccttcg gacctacgtt cgcatacaaa acgaaacgcc gacgtttctc
      901 gatgccgtgc tcggcgaaag ggggatcgca tgaagcacct gaaaggggtc aaccgcaagg
      961 ggaagaagat cgaaaagggg aaggcggacc tcccggtcgt ggaggcgcag gggagcatcc
     1021 cgttcatgca cacctgcacg tccgtgttca accccggcta cgagatcgac tggaccggct
     1081 ccacgaagca gctgtgcacc ccgatcgaga ccgacctgtt tggtacgacc gacatgtact
     1141 gctggtggcc gggacaggcg ccggacacct acaacaaccc cgactggaac gccgactgca
     1201 cccgggcgat gaaggactgg atgaagctca aggtcgtcaa gccggagtgg taggaagccg
     1261 cggtgcggca cacgaaacgg aataacccca cggagggaac gatacgatga agagaacggt
     1321 ctttttcgcg ttggtgctgc tcgggacgac cctgctcctc gcttcgggca acgccccggc
     1381 actcggcaag gacatcctcc tgcaggggat gctccacaac cggttcaacg tcctcgacgg
     1441 cgacaaggac gagatcgtcg cgacgatcga aaccaggggg aagaaggtca ccaacttcac
     1501 ctgggacccc agggacctgg acaagatcta caccatcacc gactgggggc agcagatcga
     1561 acagctcgac ctgaagggga agaaggtggt ccgcgcgttc cgcatggggt cgggggacct
     1621 caaggtccgt gcgctcgaca tcgaactcaa ccccgtgaat cccaacctgc tgtacgcgct
     1681 ctccc
//
LOCUS       DATGYW010000396         2742 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_246916, whole genome shotgun sequence.
ACCESSION   DATGYW010000396 DATGYW010000000
VERSION     DATGYW010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2742
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246916"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..924
                     /locus_tag="VK429_05535"
     CDS             <1..924
                     /locus_tag="VK429_05535"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HLN91305.1"
                     /translation="SSRAMEEVLRKIRLVAPTRMNVLITGESGTGKELVARGVHGLSP
                     RVDRPFLPLNCAAIPETLLESELFGHEKGAFTGATASRPGKFETAEGGTLFLDEVGDV
                     SPSIQSKLLRAIEQKEVMRVGGSQVVHADVRIIAATNQDLKGRVEAKAFREDLYYRLN
                     VFNIVVPPLRERREDIPKLCDHFLALIGKENGLPPKRLSPAALKTLLACRWPGNVRQL
                     RNALETATLVAQGEAIEPGDLPPEVTQAVLPPTAAEPIPLPPSRTLSEMERDAIRAAL
                     VQTAGNKTLAAKLLGIGLRTLHRKVKEFGIE"
     gene            1187..>2742
                     /gene="dnaK"
                     /locus_tag="VK429_05540"
     CDS             1187..>2742
                     /gene="dnaK"
                     /locus_tag="VK429_05540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002612704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HLN91306.1"
                     /translation="MAKIIGIDLGTTNSVVAVMEGSEPKVLINEEGGRLTPSVVGFGK
                     DGQILVGQVAKRQAVLNPENTVFSIKRFMGRRYDEVGEEVRLVPYKIIKGQNQEARVQ
                     AGGKEYTPQQVSAMILGKLKKAAETYLGEEVKQAVITVPAYFNDSQRQATKDAGTIAG
                     LEVLRIINEPTAAALAYGLDRKKNELIAVFDFGGGTFDISILEVGDNVVEVKSTNGDT
                     HLGGDNIDQRLIEWIIAEFKKDQGIDLSKDRTVLQRLKEAAEKAKIELSSTMETEISL
                     PFITADAAGPKHLQLKLSRAKFEQMVQDILDRTLKPCEMAIRDAGVPVGKIDEVVLVG
                     GSTRIPKVIEMVKSFFGKDPHQGVNPDEVVAAGAAVQAGVLGGTVKDLLLLDVTPLSL
                     GIETLGGVMTKLIERNTTIPVRKSEVFTTASDGQPSVEIHVLQGEREMAGDNRTLGRF
                     HLDGIPPAPRGVPQVEVTFDIDANGILHVNAKDKGTQKEQKITITASTGLNKDEIDKM
                     VKDAQSHSDE"
BASE COUNT          546 a          839 c          950 g          407 t
ORIGIN      
        1 tcctcccgcg cgatggaaga ggtcctgcgg aagatccgcc tggtcgctcc gacccggatg
       61 aacgtcctga tcaccgggga gagcggcacg gggaaggaac tggtcgcccg gggggtccac
      121 ggcctgagcc cccgcgtcga ccggcccttc ctgccgttga actgcgccgc gatcccggag
      181 acgctcctcg agtccgagct cttcggccac gagaaggggg cgttcacggg ggcgaccgct
      241 tccaggccgg ggaagttcga gaccgccgag ggggggacgc tcttccttga cgaggtcggg
      301 gacgtgtctc cgtcgatcca gtcgaagctc ctgcgcgcca tcgagcagaa ggaggtgatg
      361 cgggtcggcg gatcgcaggt ggtccacgcg gacgtgcgga tcatcgcggc gacgaaccag
      421 gacctgaaag gacgcgtgga ggcgaaggcg ttccgcgaag acctctacta ccggctgaac
      481 gtcttcaaca tcgttgtccc gccgctgcgg gaacgccgcg aggacatccc gaaactgtgc
      541 gatcacttcc tcgcgctgat cgggaaggag aacgggcttc ccccgaagcg gctttccccc
      601 gcggcgctca aaaccctgct cgcctgccgg tggcccggga acgtccgcca gctgcgcaac
      661 gccctggaaa ccgctaccct cgtcgcgcag ggagaggcga tcgagcccgg cgacctcccc
      721 cccgaggtga cgcaggcggt cctccccccg acggcggccg aaccgatccc tctgcccccc
      781 tcccgcaccc ttagcgagat ggagcgggac gccatacggg ccgctctcgt ccagaccgct
      841 gggaacaaga cccttgcggc gaagctcctc ggcatcggcc tgcgcaccct ccaccggaag
      901 gtcaaggagt tcgggatcga ataggcggta aggagagtcc ttccactgcg ccataatggc
      961 gctgtacgcc ttctttttcg tgcctaaatg gcgcacttcc tccgggttcc cccatgggca
     1021 agagaggctt cctgatcctg ttttcttatg aaaacgaata gttgccgaca tattacgttt
     1081 ccggatcgat tggcacggga cttgtttgat tttaggcaac aaggctcgtg gagccacgac
     1141 gctggaagac gagtgacctg aaaaaataca gggaaggagt aacgaaatgg cgaagatcat
     1201 cgggatcgac ctggggacga cgaactccgt cgtggcggtg atggagggaa gcgagccgaa
     1261 ggtgctcatc aacgaggagg ggggtcggct cacgccatcg gtggtcgggt tcggcaagga
     1321 cggccagatt ctggtcggtc aggtggcgaa gcgccaggcg gtgctgaacc cggagaacac
     1381 cgtattctcc atcaagcggt tcatggggcg tcggtacgac gaggtgggcg aggaagtccg
     1441 gcttgtgccg tacaagatca tcaaggggca gaaccaggag gcgcgggtcc aggccggggg
     1501 gaaggagtac acaccgcagc aggtctccgc gatgatcctc gggaagctca agaaggcggc
     1561 ggagacgtac ctcggcgagg aggtgaagca ggcggtcatc accgttcccg cctacttcaa
     1621 cgactcccag cggcaggcga ccaaggacgc cgggacgatc gccggcctcg aggtgctccg
     1681 gatcatcaac gagcccacgg cggcggcgct ggcgtacggg ctcgaccgga agaagaacga
     1741 gctgatcgcc gtcttcgact tcggcggcgg caccttcgac atctccatcc tcgaggtggg
     1801 ggacaacgtg gtcgaggtga agtcgacgaa cggggacacg cacctgggcg gggacaacat
     1861 cgaccagcgg ctgatcgaat ggatcatcgc ggagttcaag aaggaccagg ggatcgacct
     1921 gtcgaaggac cgcaccgtcc tgcagcggct gaaggaggcg gcggagaagg cgaagatcga
     1981 gctctcctcc acgatggaga cagagatcag ccttccgttc atcaccgcgg acgccgcggg
     2041 gccgaagcac ctgcagctga agctttcccg ggcgaagttc gagcagatgg tccaggacat
     2101 cctcgaccgg acgctgaagc cgtgcgagat ggcgatacgc gacgcgggcg tccccgtcgg
     2161 caagatcgac gaggtcgtcc ttgtcggcgg atcgacccgg atcccgaagg tcatcgagat
     2221 ggtgaagtcg ttcttcggca aggatccgca ccagggcgtc aaccccgacg aggttgtcgc
     2281 ggcgggcgcg gcggtccagg cgggcgtgct cggcgggacg gtgaaggacc tgctcctcct
     2341 cgacgtgacc ccgctgtcgc tggggatcga gacgctgggc ggggtgatga cgaagctgat
     2401 cgagcggaac acgacgatcc ccgtgcgcaa gagcgaggtc ttcaccaccg cgtcggacgg
     2461 ccagccgagc gtggagatcc atgtcctcca gggggagcgc gagatggccg gggacaaccg
     2521 gacgctcggg cggttccacc tcgacgggat cccgccggcg ccgcgcggcg tgccgcaggt
     2581 cgaggtgacc ttcgacatcg acgcgaacgg gatcctccac gtgaacgcga aggacaaggg
     2641 gacgcagaag gagcagaaga tcacgatcac cgcgtcgacc gggctcaaca aggacgagat
     2701 cgacaaaatg gtcaaggacg cgcagtcgca ttccgacgag ga
//
LOCUS       DATGYW010000397         2077 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_410026, whole genome shotgun sequence.
ACCESSION   DATGYW010000397 DATGYW010000000
VERSION     DATGYW010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2077)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2077)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2077
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410026"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VK429_05545"
     CDS             <1..468
                     /locus_tag="VK429_05545"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLN91307.1"
                     /translation="YHHVYGLDVVMLRFFTVYGPRQRPEMAIHKFTRRILEGKDLDLY
                     GDGSSRRDYTYIEDIVSGVLGALTAPPGYRVYNLGEAATISLSDLVALIEAACGKAAV
                     RRFKPPQPGDVPLTYADISRARKEIGYDPRTPIGRGVSLFVEWYRRQETARPT"
     gene            481..1602
                     /gene="fbp"
                     /locus_tag="VK429_05550"
     CDS             481..1602
                     /gene="fbp"
                     /locus_tag="VK429_05550"
                     /EC_number="3.1.3.11"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020262094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1,6-bisphosphate aldolase/phosphatase"
                     /protein_id="HLN91308.1"
                     /translation="MKVTLSVIKADIGSIGGHIRPSAKLLETVRSKVAELGKGLLIDT
                     YIGFTGDDVAILMSHTGGTGNAQVHKLAWDAFIAGTAVAKAQGLYGAGQDLLKDSFSG
                     NVKGMGPAVAEMEIEERPNEPFVLFAADKTDPGAYNLPSYLGFADPMFSSGLILSPKV
                     GKGFTFRIMDVANTDGDKVIDLSAPEDLYDIAALLRDQERFVVESIRSRATGEIAAVV
                     STTRLHNIAGKYTGKDDPVMLVRTQGNFPATGEILAPYTIGHLVAGFMRGSHHGALMP
                     VPRNTGTSFFDGPPIVSALAFSVKEGRFTEPADAFDHPYWEYVRARVSAKSEDLRRQG
                     FFGPAMLPYSELEYGGIVERMKGMESKFRVLEGKESVKA"
     gene            1738..>2077
                     /locus_tag="VK429_05555"
     CDS             1738..>2077
                     /locus_tag="VK429_05555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91309.1"
                     /translation="MGDGIRFRFDFSLVGESNLRGGDGIAAPDFRKMMALVDDAVETL
                     AGKHRRGEIGFPDLPFLEKEARAISRDAASLRSKCTHLLVLGIGGSALGTKAVQEAVG
                     GAAGRPGMALS"
BASE COUNT          379 a          642 c          718 g          338 t
ORIGIN      
        1 tatcatcacg tctacggtct ggacgtggtg atgctgcgct tcttcaccgt gtacggcccc
       61 cgccagcgcc ccgaaatggc gatacacaaa tttacccgga ggatcctgga ggggaaggat
      121 ctcgacctgt acggcgacgg ctcttcccgg agggattaca cctatatcga agacatcgtc
      181 tccggagttc tcggcgcgct gaccgcgccc ccgggatacc gggtctataa tcttggggag
      241 gcggccacga tctccctttc ggacctggtc gcgctgatcg aggcggcatg cgggaaggcc
      301 gcggtgcggc gcttcaagcc gccgcagccc ggggacgttc ccttgacata cgcggacatc
      361 tcccgcgcca ggaaggagat cggctacgac ccgcgcacgc cgatcgggcg cggcgtatcc
      421 cttttcgtcg aatggtaccg gcgtcaggaa accgcaagac ctacctgaaa ggaggcttcc
      481 atgaaggtca cgctgtcggt catcaaggcg gacatcggtt ccatcggggg gcacatccgg
      541 ccgagcgcga agctgctcga aacggtgcgg tcgaaggtcg cggagctcgg gaaagggctc
      601 ctgatcgaca cctacatcgg ttttaccggg gacgacgtgg cgatcctgat gtcccacacc
      661 ggagggacgg ggaacgcaca ggtccacaag ttggcgtggg acgccttcat cgccgggacc
      721 gcggtggcga aggcccaggg gctctacggc gcgggccagg acttgctgaa ggactccttc
      781 tcagggaacg tgaaggggat gggccccgcc gtggcggaga tggagatcga ggagcgcccc
      841 aacgagccat tcgtcctgtt cgcagcagac aagaccgacc cgggagcgta caaccttcca
      901 tcctacctcg gcttcgccga cccgatgttc tcctccggcc tgatcctctc cccgaaggtg
      961 gggaaggggt tcaccttccg catcatggac gtcgcgaaca cggacgggga caaggtgatc
     1021 gacctctccg cgcccgagga tctctacgac atcgcggcgc tcttgcgcga ccaggagcgg
     1081 ttcgtcgtcg aatccatccg ctcccgcgcc acgggggaga tcgcggccgt ggtcagtacg
     1141 acgcgactcc acaacatcgc ggggaagtac accgggaagg acgacccggt gatgctggtc
     1201 cggacgcagg ggaacttccc cgccacgggg gagattctcg caccctacac catcggtcac
     1261 ctggtcgcgg gcttcatgcg gggaagccat cacggggcgc tcatgccggt gccgcggaac
     1321 acgggaacct ccttcttcga cggtccgccg atcgtctcgg ctctcgcctt cagcgtgaag
     1381 gaggggcggt ttaccgagcc ggccgacgcg ttcgatcacc cgtactggga gtacgtcagg
     1441 gcgagggtgt cggccaagtc cgaggatctt cgccggcaag ggttcttcgg ccccgcgatg
     1501 ctgccgtaca gcgagctcga gtacggcggg atcgtggaac ggatgaaggg gatggagtcg
     1561 aagttccgcg tgctcgaagg aaaggaatcc gtcaaggcgt agtgctgcga ttcatgaatt
     1621 tggaaacgta tcgggaagac agcactgaag gcgcacgaaa caggagggcc cggcggagcc
     1681 ccgccctccg aggtggcgca gccggagtct gatgtatcta tagaaggaga gggcgacatg
     1741 ggcgacggga tccggtttcg cttcgatttc tccctcgtgg gggaaagcaa cctccgggga
     1801 ggggacggga tcgccgcccc ggacttccgg aagatgatgg cgctggtcga cgacgcggtg
     1861 gaaaccctcg ccgggaagca tcggcgcggg gagatcggct tccccgacct tccgttcctc
     1921 gagaaagagg cccgggcgat ctccagggac gcggcgtccc tgcggtcgaa atgcacgcac
     1981 ctcctcgtcc tcggcatcgg cggctcggcg ctggggacga aggcggtgca ggaggcggtc
     2041 ggaggcgcgg cggggcgccc cgggatggcg ctctccg
//
LOCUS       DATGYW010000398         1770 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_183588, whole genome shotgun sequence.
ACCESSION   DATGYW010000398 DATGYW010000000
VERSION     DATGYW010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183588"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VK429_05560"
     CDS             <1..228
                     /locus_tag="VK429_05560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012527225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HLN91310.1"
                     /translation="AFTLSMHEFIYALTFISVSMKKTVSIGVPTELVRGDVFQWGSLM
                     AGALIASLPVAVVYTFFLDRFVAGFTMGAVK"
     gene            295..1092
                     /locus_tag="VK429_05565"
     CDS             295..1092
                     /locus_tag="VK429_05565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005999790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030701 - NAD+-dinitrogen-reductase
                     ADP-D-ribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009399 - nitrogen fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)--dinitrogen-reductase
                     ADP-D-ribosyltransferase"
                     /protein_id="HLN91311.1"
                     /translation="MGTDTLPVNRCDQPPWVIASPHFNRHPLPLEIQGVRRAHRSFFS
                     RLERLVDPAERQRCFRDYIDLVFQTGKWRRETTPLGRRSLRNSYLRFLRGWMLDASSV
                     EGAVLKGWVESRFGLSPVFHAGLIEGIDSREYLLYLAERMRESARTNAVEAQFDLLYE
                     FVQYELRRRHPGVPSFTLYRGVRNLADYRILENPGGNRAVVRLNNLNSFSSRLEHAWQ
                     FGGNVFEADVPAAKIFFRADLLPGVLPKGEEEAMVIGGDFEVTVRSY"
     gene            1089..1247
                     /locus_tag="VK429_05570"
     CDS             1089..1247
                     /locus_tag="VK429_05570"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HLN91312.1"
                     /translation="MSPRSKAPPAATGIVDRARAAMFGVAVGDALGATIEFMTPAQIR
                     DRSPTTRI"
     gene            1196..>1770
                     /locus_tag="VK429_05575"
     CDS             1196..>1770
                     /locus_tag="VK429_05575"
                     /inference="COORDINATES: protein motif:HMM:NF015692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HLN91313.1"
                     /translation="MHDAGPDPGQVTDDTDMTLCVARGIVGSGRWDLGPIADRFARWL
                     SGNPTDVGATCRRGIEEYIGKGRLEALPDERGAGNGAVMRVAPVALYTLGNEELLSRL
                     AVEQAHITHHNPLSDAACVSVGTMIQRGLLGTPPRDVRAVAEELCARYPEFRFERYDG
                     KSSGYVVDTLRTVFDAFFSTDTFEDCVVKTV"
BASE COUNT          286 a          571 c          585 g          328 t
ORIGIN      
        1 gcctttaccc tctcgatgca cgagttcatc tacgccctga ccttcatctc cgtgtcgatg
       61 aagaagacag tgtcgatcgg ggtgcctacg gagctggtgc gcggagacgt cttccaatgg
      121 ggttcgctca tggccggggc gctgatcgcc agcctcccgg tcgcggtcgt ctacaccttc
      181 ttcctggacc ggttcgtcgc cggcttcacg atgggggcgg tgaagtagca tcccgcgccg
      241 aatcgccgga acgatgcaac caggctcttc tgctcccggt ggtatcatga gttcatgggc
      301 accgataccc tgccggttaa ccgctgcgac cagcccccgt gggtgatcgc atcgcctcac
      361 ttcaaccgac accccctccc cctcgagatc cagggtgtcc gacgcgccca tcgatccttc
      421 ttctcccgcc ttgaacgcct cgtcgacccc gcggagcggc agcggtgctt ccgggactac
      481 atcgacctgg tctttcaaac cggaaaatgg cgacgggaaa cgacccccct cggccgccgg
      541 tcgctccgga acagctatct ccggttcctc cgcggatgga tgctcgacgc gagttcggtg
      601 gagggcgcgg tgctgaaagg gtgggtggag agccgcttcg gtctctcccc ggttttccat
      661 gccggcctga tcgaggggat cgattcgagg gagtatctcc tctacctcgc cgagcggatg
      721 cgggagagcg cgcggacgaa cgccgttgag gcccagttcg accttctcta tgagttcgtc
      781 cagtacgaat tgcgacggcg gcatccgggg gtcccctcct tcaccctgta ccggggggtc
      841 cgcaacctcg cggattaccg catcctcgag aatcccggcg ggaaccgcgc cgtcgtccgg
      901 ttgaacaacc tcaactcctt ctcttcccgg ctcgagcatg cgtggcagtt cgggggaaac
      961 gtcttcgagg ccgacgtccc cgccgccaag atcttcttcc gcgcggatct cctcccgggg
     1021 gtccttccca agggagaaga ggaggcgatg gtgatcgggg gggatttcga agtgaccgtg
     1081 aggagctatt gagcccgcgt agcaaagccc ctcctgccgc gacagggatc gtcgaccgtg
     1141 cgcgggcggc gatgttcggc gtcgccgtgg gagatgcgct gggggccacg atcgaattca
     1201 tgacgccggc ccagatccgg gacaggtcac cgacgacacg gatatgacgc tttgcgtcgc
     1261 cagggggatc gtcggttcgg gccgatggga tctcgggccg atcgcggacc ggttcgcccg
     1321 ttggctgtcg gggaacccca ccgacgtggg ggccacctgc cgtcgcggga tcgaggagta
     1381 catcggaaaa ggacggcttg aagcgctccc cgacgagcgg ggggcgggaa acggcgcggt
     1441 gatgcgggtc gctccggtcg cgctctacac gctcgggaac gaggaactcc tctcccgcct
     1501 cgcggtcgag caggcgcata tcacccacca caacccgctc tccgacgcgg cgtgcgtgtc
     1561 ggtggggacg atgatccagc ggggccttct cggcacgccc ccgcgggacg tgcgggcggt
     1621 ggcggaagaa ttgtgcgcac ggtacccgga gttccgcttc gagaggtatg atggcaaatc
     1681 gtccggctac gtggtggaca cgctccggac ggtgttcgac gcattcttct ccacggacac
     1741 cttcgaggat tgtgtggtga aaacggtgaa
//
LOCUS       DATGYW010000399         1789 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_246953, whole genome shotgun sequence.
ACCESSION   DATGYW010000399 DATGYW010000000
VERSION     DATGYW010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1789)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1789)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1789
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246953"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1173
                     /gene="radA"
                     /locus_tag="VK429_05580"
     CDS             <1..1173
                     /gene="radA"
                     /locus_tag="VK429_05580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012648768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HLN91314.1"
                     /translation="ASSRTSCGIAEFDRVMGGGVVPASSTLLGGDPGIGKSTILLQAA
                     RGLARHGKPVLYVSGEESEAQVKLRASRLGVTDGGIYLMSETALERILSATAELSPGM
                     LIVDSIQTVFSSDLPGAPGSVGQVRECAARLTFFGKKAGVSVFLVGHVTKEGAIAGPR
                     VLEHIVDTVLYFEGEKGHPYRILKAVKNRFGSTNEIGVFEMRAEGLTEVADPSGMFLS
                     ERSDETSGTLVFPAIEGTRPLLVEVQALVSQSFLAMPRRTTLGVDYNRVILMCAILEK
                     KAGVSLYNQDVFVNVAGGIRVDEPAADLALCCAVAGSFKDRMVPPGTAVFGEVGLGGE
                     VRAVPMAEMRLNEAAKMGFSRVVLPASNAERLGAKFPLELLPVRHVKEALSRVAGK"
     gene            1180..1629
                     /locus_tag="VK429_05585"
     CDS             1180..1629
                     /locus_tag="VK429_05585"
                     /inference="COORDINATES: protein motif:HMM:NF013722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HLN91315.1"
                     /translation="MGKRYWDDLTEGERFTCRPVAFDREGVIAFGKEYDPLPFHADEE
                     AARRSIFGGVIASALHTISACTRVVVEAHGEIAILSGLSIDEIRTFHPVRPGDVLTVE
                     GCWDGLRRSRSRPDRGIAGLKCTVRNQRGETVMEYGYRYLVACRPKP"
BASE COUNT          262 a          570 c          673 g          284 t
ORIGIN      
        1 gcctcgtcgc ggacgtcgtg cgggatcgcc gagttcgacc gggtgatggg gggcggtgtg
       61 gttcccgcct cgtcgacgct cctgggcggc gacccgggga tcgggaagtc caccatcctc
      121 ctccaggcgg cgcggggcct cgcccggcac gggaagccgg tcctgtacgt ctccggcgag
      181 gagtcggaag cgcaggtgaa attgcgtgcc tcgcggcttg gcgtgaccga tgggggcatc
      241 tacctgatgt cggaaacggc cctcgagcgg atcctctccg ccaccgcgga gctctccccc
      301 gggatgctga tcgtcgactc gatccagacc gtgttctcct ccgatcttcc cggggcgccg
      361 ggttccgtcg gccaggtgcg ggagtgcgcc gcgcgtctca ccttcttcgg gaagaaggcg
      421 ggggtgtcgg tcttcctcgt ggggcacgtg acgaaggagg gggcgatcgc ggggccgcgg
      481 gtgctcgagc acatcgtgga cacggtccta tacttcgagg gggagaaggg gcacccgtac
      541 cggatcctga aggcggtgaa gaaccggttc ggctcgacga acgagatcgg cgtcttcgag
      601 atgcgcgccg aggggttgac cgaggtcgcc gacccgtcgg ggatgttcct ctccgaacgg
      661 tcggacgaga cgtcgggaac gctcgtcttc ccggcgatcg aagggacccg gcctctgctc
      721 gtcgaggtgc aggcgctcgt ttcgcagtcg ttcctcgcga tgccgcgccg cacgacgctc
      781 ggcgtcgact acaaccgggt gatcctgatg tgcgccatcc tcgagaagaa ggcgggcgtc
      841 tccctctaca accaggacgt cttcgtcaac gtggccggag ggatccgggt cgacgaaccc
      901 gcggccgacc tcgccctctg ctgcgcggtg gccgggtcct tcaaggaccg gatggtcccg
      961 ccggggacgg cggttttcgg cgaggtggga ctggggggcg aggtgcgcgc ggtgccgatg
     1021 gccgagatgc gcctgaacga agccgccaag atggggttct cccgggtcgt cctgccggcc
     1081 tccaacgcgg agcgcctcgg cgcgaagttc cccctcgaac tgctccctgt tcgccacgtg
     1141 aaggaagccc tctcccgcgt cgcggggaag taggccggca tggggaagag gtactgggac
     1201 gatttgacgg agggagagcg gttcacgtgc cgccccgtcg cattcgaccg ggaaggggtt
     1261 atcgccttcg ggaaggagta cgacccgctc ccgttccacg cggacgagga ggcggcgcgc
     1321 cggtcgatct tcggcggcgt gatcgcgtcc gccctgcaca ccatttcggc ctgcacgcgg
     1381 gtcgtggtcg aagcgcacgg ggagatcgcg atcctgtcgg ggttgagcat cgacgagatc
     1441 cgcacgttcc acccggttcg cccgggggac gtcctgacgg tcgaggggtg ttgggacggc
     1501 ctccggcgat cgcgaagcag gccggaccgg gggatcgcgg ggttgaagtg cacggtcagg
     1561 aaccagcgcg gcgagacggt gatggagtac ggataccgct acctggtcgc ctgccggcca
     1621 aagccctgac ggacgcacgc ggcggaacga cgggcggggg ggacgggtga agcgttgcga
     1681 atgggccgac cggggcgatc tcgagcgggc ctatcacgac acggcacgtc actccggcga
     1741 tcccccggtc cggcttgctg cgcgaccgcc ggaggccgtc ccaacgccc
//
LOCUS       DATGYW010000400         2273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_410230, whole genome shotgun sequence.
ACCESSION   DATGYW010000400 DATGYW010000000
VERSION     DATGYW010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410230"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..803
                     /locus_tag="VK429_05590"
     CDS             <1..803
                     /locus_tag="VK429_05590"
                     /inference="COORDINATES: protein motif:HMM:NF019869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HLN91316.1"
                     /translation="VIDEVRRGIEEYRFNEAGSAFYQFVWHEFCDWYLEMIKPVLSQE
                     AGEVERQVQRAVLVRIYETILALGHPFVPFITEELWHALPGKRGLLYDRSFPVVDIGA
                     TDENVEDEMAHLMDVIRAVRNIRSELNVPPGKKVEVRLKGQVEVQKFLRDHEEIVRRL
                     ARANRVTYVDPDYIPVKDATAVVNDIEVCLPLEGLIDFGQEAKRLGKEVEKTKAEYAR
                     VAGQLGNARFTAKAPLDIVDALRDREKALEQKIAKLGKNLELVSRYLT"
     gene            800..1624
                     /gene="nadC"
                     /locus_tag="VK429_05595"
     CDS             800..1624
                     /gene="nadC"
                     /locus_tag="VK429_05595"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011421441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HLN91317.1"
                     /translation="MISRHLYEEIVREALREDAPFGDPFGEAFHGDASGLFLAGGDGV
                     LCGGPVASEVFRQVDPSVSVSFRPDGCRVARGDRIGEASGPAGSLLRAERVALNFLQR
                     LSGVATATSLYASRIAAHGTRLLDTRKTTPLLRVLEKYAVRVGGGANHRFSLSDGILI
                     KENGIRAAGGIAPAVVAARSAAHHLLRVEVEAETLPDVEAAVAAGADAVLLDNMPPTM
                     VREAVARFGGIVFLEASGGIHLGNVEEYARTGVAAIAVGAITHSAPALDISFELST"
     gene            1621..2250
                     /locus_tag="VK429_05600"
     CDS             1621..2250
                     /locus_tag="VK429_05600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91318.1"
                     /translation="MNPRVPILLVLLSVSPAAGRAAEGYRAYESTVASVNGEVLFVSD
                     VAREACFLRCAAMPGTGEEILPLREVRDRMILDTLALQEQRKLLLGTVDNVTLAGYAR
                     EAESRMAACPSPCEREIAPGVIREWIRRKLLIRDFFNRRVAVFVEVKDDDVRREMARR
                     SSAPGYDGKLTREEVREEMLEARIAQEIRNWQARVASKARIVLSPMEDR"
BASE COUNT          357 a          723 c          821 g          372 t
ORIGIN      
        1 gcgtgatcga cgaggtccgc cgggggatcg aggagtaccg gttcaacgag gcgggctccg
       61 ccttctacca gttcgtctgg cacgagttct gcgactggta cctcgaaatg atcaaacccg
      121 tgctttccca ggaggcgggc gaggtggaac ggcaggtgca gcgggccgtt ctggttcgga
      181 tctacgaaac gatcctggcg ctcggccatc cgttcgtccc cttcatcacc gaggaattgt
      241 ggcacgccct cccggggaag cgggggctcc tgtacgaccg atcgttcccc gtcgtcgata
      301 tcggggcgac cgacgagaac gtcgaggacg agatggcgca cctgatggat gtcatccggg
      361 cggttcgcaa catccgcagc gagctgaatg tcccgccggg gaagaaggtc gaggttcgcc
      421 tgaaaggcca ggtggaggtg cagaagttcc tgcgggacca cgaggagatc gtacggcgcc
      481 tcgcccgggc caaccgggtg acgtacgtcg atcccgacta catccccgtg aaggacgcga
      541 ccgcggtggt gaacgacatc gaggtctgcc tccccctgga gggcctcatc gatttcgggc
      601 aggaggcgaa gcggctcggc aaggaggtgg agaagacgaa ggcggagtat gcccgcgtcg
      661 ccggacagct ggggaacgcg cggttcaccg ccaaggcccc cctggacatc gtcgacgccc
      721 tgcgcgaccg cgaaaaagcg ctggaacaga agatcgccaa gctcgggaag aacctcgagc
      781 tggtgagtcg atatctcacg tgatttcccg acacctctac gaggagatcg tccgcgaggc
      841 cctgcgcgag gacgcgccgt tcggcgaccc cttcggagag gccttccatg gcgacgcgtc
      901 cggcctcttc cttgcggggg gtgacggggt gctgtgcggc gggccggtgg cgtcggaggt
      961 gtttcgtcag gtcgacccgt ccgtttccgt ctccttccgc cccgacgggt gccgggtggc
     1021 ccgcggcgac cggatcgggg aagcgtccgg tccggccggg tcccttcttc gggcggagcg
     1081 ggtggctctc aacttcctcc agcggctctc gggcgtggcc accgcgacgt ccctctacgc
     1141 ttcgcggatc gccgctcacg gaacgaggct gctcgacacg cggaaaacga cgccgctgct
     1201 ccgggtcctc gagaagtacg ccgtccgggt ggggggcggg gcgaaccacc ggttctccct
     1261 ttcggacggg atcctcatca aggagaacgg gatccgcgcg gccgggggga tcgcccccgc
     1321 ggtcgtagcg gcgcgttcgg cggcgcacca cctcctccgc gtcgaggtcg aggcggagac
     1381 gcttccggac gtggaggcgg cggtcgcggc gggggccgac gcggtcctcc tcgacaacat
     1441 gccgccgacg atggtccggg aggcggtcgc gcgcttcggc gggatcgtct tcctcgaggc
     1501 gtccgggggg atccacctgg ggaacgtcga ggagtacgcc cgcacggggg tggccgccat
     1561 cgccgtgggg gcgatcacac attccgcccc cgcgctcgac atctccttcg aactgtcgac
     1621 gtgaaccccc gcgttcccat cctcctggtc ctcctgtccg tttctcccgc ggcgggacgc
     1681 gctgccgagg ggtaccgtgc ctacgagtcg accgtcgcgt cggtgaacgg cgaagtgctc
     1741 ttcgtctccg acgtcgcgcg ggaggcgtgc ttcctccggt gtgcggcgat gccggggacc
     1801 ggggaggaga tcctccccct ccgtgaagtg cgggatcgca tgatcctcga cacgctggcg
     1861 cttcaggagc agcggaagct tctcctcggg acggtggaca acgtgacgct tgcggggtac
     1921 gcgcgggagg cggagtcccg gatggcggcg tgcccgtccc cctgcgaacg ggagatcgcc
     1981 cccggggtaa tccgggaatg gatccgccgg aaactgctca tccgggattt cttcaaccgc
     2041 cgggtcgccg tgttcgtgga ggtgaaggac gacgatgtgc ggagggagat ggcgcgcagg
     2101 tcttccgccc cgggatacga cgggaagctg acccgggagg aggtccggga agagatgctc
     2161 gaggcgcgga tcgcgcagga gatccggaac tggcaagccc gcgtcgcatc gaaagcaagg
     2221 atcgttcttt cgcccatgga ggatcgatga gttcaggttt gtatgccctc acc
//
LOCUS       DATGYW010000401         1793 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_304494, whole genome shotgun sequence.
ACCESSION   DATGYW010000401 DATGYW010000000
VERSION     DATGYW010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304494"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..301)
                     /locus_tag="VK429_05605"
     CDS             complement(<1..301)
                     /locus_tag="VK429_05605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009609696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HLN91319.1"
                     /translation="MHWEGIIRHYGRFFTFVPEEAVVTLLEGNTPLIPAPSLARRISP
                     GTELYLKYEGLNPTGSFKDRGMTMAVSKAKADGSDSVICASTGNTSASAAAYASRA"
     gene            complement(318..1637)
                     /locus_tag="VK429_05610"
     CDS             complement(318..1637)
                     /locus_tag="VK429_05610"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HLN91320.1"
                     /translation="MTVSPREIGVGIVGFGTVGTGTVKLLLENAELLRKRVGIPIRLV
                     RVADQDASKDRGIRLPEGVFIGDGMQVARDPDVHILIELVGGTAAAKDFLLEAIRHRK
                     SVVTANKALLAECGPEIVKAVQTAGVDIGFEASVGGGIPIIRTLREGLAANRIRAIFG
                     IINGTCNYILTRMTREGKPFAEVLAEAQAAGLAEADPSFDVDGIDTAHKLAILVWLAT
                     GGHVPQKAIFVQGIREIDQDDISFAKEFGYTIKLLAIAKENGAGIEARVHPTMIPSHS
                     PLATVDGAYNAIYVKGDFVGSSLSYGQGAGMLPTASAVVSDVIEIARNLRRGCTGRIP
                     PAGFFLADPSARADLAPFDQVHSEYYLKFRVMDKPGVLSRIAGVLGSHAISIASVLQK
                     GQGQSAVPIFIVTHRSKESDMRAALAEVDRLPDVLDRTRMIRIENNL"
     gene            complement(1634..>1793)
                     /locus_tag="VK429_05615"
     CDS             complement(1634..>1793)
                     /locus_tag="VK429_05615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007235817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alanine transaminase"
                     /protein_id="HLN91321.1"
                     /translation="TKAKVAVSPGIGFGEHGEGFVRFALVENEHRIRQAIRGVKGMLQ
                     SPPKVKAK"
BASE COUNT          296 a          614 c          559 g          324 t
ORIGIN      
        1 cggcgcgaga ggcgtaggcg gccgcggagg cggacgtgtt cccggtggaa gcgcagatga
       61 ccgaatcgga accgtccgct ttcgccttcg agaccgccat cgtcatcccg cgatccttga
      121 aggaaccggt cgggttcagc ccttcgtact tgaggtacag ctccgttccc ggagagatcc
      181 ggcgggccag cgaaggagca gggatgaggg gagtgttccc ctccagcagc gtgacgaccg
      241 cctcctccgg aacgaaggtg aaaaacctcc cgtaatggcg gatgatccct tcccagtgca
      301 tttcgtcccg gttcctttta gaggttgttt tcgatccgga tcattcgcgt ccggtcgagg
      361 acatcgggga gacgatccac ctcggcaagc gccgcccgca tgtcgctctc cttcgaacgg
      421 tgggtgacga tgaagatggg aaccgcggac tgcccctgcc ccttctggag gacggacgcg
      481 atgctgatcg cgtggctccc gagcaccccc gcgatcctcg aaaggacgcc cggcttgtcc
      541 atgacccgga atttcaggta atactcgctg tggacctggt cgaacggcgc aaggtccgcc
      601 cgggccgacg gatcggcgag gaagaacccg gccggcggta tccttcccgt gcatccacgc
      661 cgaaggttcc gcgcgatctc gatcacgtcg ctcaccaccg cggacgccgt cgggagcatc
      721 cccgctccct gtccgtacga cagggaggaa ccgacgaagt ccccctttac gtagatcgcg
      781 ttgtaggcgc catcgaccgt ggccaatggg gaatgggaag ggatcatcgt cgggtggacc
      841 cgcgcctcga ttcccgcgcc gttctccttc gcgatcgcca gaagcttgat cgtgtacccg
      901 aactccttcg cgaaggagat gtcgtcctgg tcgatctccc ggatcccctg cacgaagatc
      961 gccttctggg gaacgtgccc gccggtggcg agccagacga ggatcgccag cttgtgcgcc
     1021 gtgtcgatac cgtccacgtc gaatgacggg tccgcctcgg cgagcccggc ggcctgcgcc
     1081 tcggcgagga cctctgcgaa cggcttcccc tccctggtca tgcgcgtaag gatgtagttg
     1141 cacgtaccgt tgatgatccc gaagatcgcc cggatccggt tcgccgccag cccttcccgc
     1201 agcgtccgga tgatggggat ccctccgccg acgctcgcct cgaacccgat gtcgacgccg
     1261 gcggtctgga cggccttgac gatctccgga ccgcactccg caagcagggc cttgttcgcc
     1321 gtcaccaccg atttcctgtg tcggatcgcc tcgagcagga agtctttcgc ggccgccgtg
     1381 ccgccgacga gttcaatgag gatgtggacg tcgggatccc tggcgacctg catgccgtcc
     1441 ccgataaaga cgccctccgg caggcggatg ccccgatcct tcgacgcatc ctggtccgcg
     1501 acccggacga gccggatcgg gatcccgacg cgctttcgga gaagttccgc gttctcgagg
     1561 agaagcttga ccgtgccggt gccgacggtt ccgaatccga cgatgccgac cccgatctcc
     1621 cgcggggaaa cggtcatttc gccttgacct tcggcggcga ctggagcatc cccttcacgc
     1681 cgcggatcgc ctgcctgatg cggtgctcgt tctccaccaa cgcgaaccgg acgaaccctt
     1741 caccgtgttc cccgaagccg atccccgggg agaccgcgac cttggccttc gtc
//
LOCUS       DATGYW010000402         1523 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_28865, whole genome shotgun sequence.
ACCESSION   DATGYW010000402 DATGYW010000000
VERSION     DATGYW010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28865"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..492
                     /locus_tag="VK429_05620"
     CDS             <1..492
                     /locus_tag="VK429_05620"
                     /inference="COORDINATES: protein motif:HMM:NF019935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HLN91322.1"
                     /translation="DRDFGKRVEEKTRGFIYERPLPPNAAEEIHRLRMRMEQELGRER
                     EDRLNLKVGRGGVVDVEFAVQYLQLLHGGSHPAVRARGTLKALYELQRAGIVTLEQYK
                     VLDEGYRFLRSLDVRLRLAHDASIDSFDPQWLEPERLERYRKETDRIRKVYLELLGLP
                     GPV"
     gene            complement(496..702)
                     /locus_tag="VK429_05625"
     CDS             complement(496..702)
                     /locus_tag="VK429_05625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91323.1"
                     /translation="MANFYENKGDRTASWEDAGGFNTHLLTELRNAMLSVEDGGKPSG
                     PVQAVVAEWIKRLPAFDFPDDEIG"
     gene            complement(804..1505)
                     /gene="queC"
                     /locus_tag="VK429_05630"
     CDS             complement(804..1505)
                     /gene="queC"
                     /locus_tag="VK429_05630"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014959786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HLN91324.1"
                     /translation="MTTGGRPIGIALVSGGMDSLVMAEFCTRESDLALLHVNYGQRTE
                     AKELLCFHAVADHLKVPPSRRLVADIEYLKRIGGSALTDGRIDVPRADPGRQGVPVTY
                     VPFRNAHLVAIAVSWAEVIGARNIYIGAVASDSPGYPDCRPEFYEAMNETIRRGTKEG
                     SGIVVKAPFVHLLKKDIVLMGKSMGVPFERSWSCYREGEKACGVCDSCTLRLRAFAEA
                     GVPDPLPYETRPFPC"
BASE COUNT          256 a          493 c          517 g          257 t
ORIGIN      
        1 gaccgcgact tcggaaagag ggtagaggag aagacccggg gcttcatcta cgaacgtccc
       61 ctgccgccga atgcggcgga ggagatccac cggctgcgga tgcggatgga gcaggagctg
      121 ggccgggaac gggaggatcg cttgaacctg aaggtggggc gggggggcgt ggtggacgtg
      181 gagttcgccg tgcagtacct gcagctcctc catggcggct cgcaccccgc ggtgcgggcg
      241 cggggcaccc tgaaggcgct ctacgaactg cagcgggcgg ggatcgttac gctcgaacag
      301 tacaaggtgc tggacgaggg gtaccgcttc ctccggtccc tggacgtccg cctgcggctg
      361 gcgcacgacg cgtcgatcga cagcttcgac ccgcaatggc tggagccgga acggctggaa
      421 cggtaccgga aggaaacgga caggatccgg aaggtgtacc tggagctgct ggggctgccg
      481 ggcccggtct agttcttagc cgatttcgtc gtcggggaaa tcgaaggcgg gcagccgctt
      541 gatccactcg gccaccacgg cctgcacggg acccgaaggc ttccccccgt cttctacgga
      601 aagcatcgcg ttgcgcaact cggtcagcag gtgggtgttg aaccctcccg cgtcttccca
      661 gctggcggtg cgatcgcctt tattttcata gaaattcgcc atcttctctc ctgctatcta
      721 ggacggacgg gcgccggaaa agattcatcc gtcccgttcg ggtggttttg ggactaagac
      781 tgtagttgcg gacgcccccc ctgtcaacag ggaaagggcc gggtctcgta cgggagcgga
      841 tcggggaccc cggcctcggc gaaggcgcgc agccgaaggg tgcacgaatc gcagaccccg
      901 cacgccttct ccccttcccg gtaacacgac caggaccgtt cgaaggggac ccccatcgac
      961 tttcccatca ggacgatgtc cttcttcaac aggtggacga agggggcctt cacgacgatg
     1021 ccgctccctt ccttcgtccc ccgccggatc gtctcgttca tcgcctcgta gaattccggg
     1081 cggcagtccg ggtagcccgg ggagtcggag gccacggcgc cgatgtagat gttcctcgcc
     1141 ccgatcacct cggcccacga aacggcgatg gcgacaaggt gcgcgttgcg gaacgggacg
     1201 taggtgacgg ggaccccctg gcgaccggga tccgcgcggg ggacgtcgat cctgccgtcg
     1261 gtcagggcgc tccccccgat ccgcttcagg tattcgatgt ccgcgacgag gcggcgggag
     1321 ggggggacct tcaggtgatc cgcgacggcg tggaagcaca ggagctcctt cgcctcggtg
     1381 cgctgtccgt aattgacgtg gagcagcgcg aggtccgact cccgcgtgca gaactccgcc
     1441 atcacgaggc tgtccatccc gccgctgacc agggcgatcc cgatcggcct gcctcccgtc
     1501 gtcacctcct cacacccccc tcc
//
LOCUS       DATGYW010000403         2226 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_464139, whole genome shotgun sequence.
ACCESSION   DATGYW010000403 DATGYW010000000
VERSION     DATGYW010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2226
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464139"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..585)
                     /locus_tag="VK429_05635"
     CDS             complement(<1..585)
                     /locus_tag="VK429_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009101615.1"
                     /note="catalyzes the thiolytic cleavage of
                     beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipyl-CoA thiolase"
                     /protein_id="HLN91325.1"
                     /translation="MGEAYICDAVRTPIGRYAGALSAIRTDDLAATPVVELMKRNPSV
                     DWGRVDDVMYGCTNQAGEDNRNVARMAGLLAGLPPEVPGVTFNRLCGSGMDAVGSAAR
                     AIRVGEAGLIVAGGVESMSRAPYVMSKGAAPFDRGVETHDSTIGWRFVNRRMAERYGT
                     ESMASTAENVAEQFRVSRKDQDLFALRSQNKTAAA"
     gene            771..>2226
                     /locus_tag="VK429_05640"
     CDS             771..>2226
                     /locus_tag="VK429_05640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91326.1"
                     /translation="MLVLLTAATFANTLPNGFHLDDFYRLVENPAVRVVSPWWRHFVD
                     VHTMATLPTITNYRPLLPLTLSLNYAIGGLHPAGYHIVNIALQAVAAVLVYLLFVELL
                     EQGSTVRRNLRPRVALAAAAVFAVHPVSGIPVNYVTARDLLLMQVFMIGALLTYVRMR
                     GSGSDTLRGWAAVLALYVLALLSKTGVVVLSGLVVAYEVAVRRESPLSPGVWLRTTPF
                     VALAIAFFAYVSLVLNHSEIDVVRSNEYTPVVYGATQLKLHLFHYMRNFVWPFPIRQG
                     PEVAVAGPLDPAALAGAMFVLLTLSAAWLARRTLPVVTFCVLAYWALLIPEASIFPLW
                     AIATDYRPYASSPFLYLSIAVAAAQLVSSNRALRVAAVLTVGWSAVTSVYLNTTWRTE
                     RSLWQHSVDYGGSALAHLNLGMSYTDPEIRATFLREAIRKAPNYILAHMNLGLALIEL
                     GRHSEGLTECLIAVSIDPYRAQTRYWMGKAYEKLG"
BASE COUNT          345 a          792 c          656 g          433 t
ORIGIN      
        1 ggcggcggcg gtcttattct ggctgcgcaa ggcgaagagg tcctggtctt tccgggagac
       61 ccggaactgc tccgccacgt tctccgcggt cgacgccatc gactcggtcc cgtaccgctc
      121 cgccatccgc cggttcacga agcgccaccc gatcgtgctg tcgtgcgtct cgaccccccg
      181 gtcgaacggg gcggcacctt tactcatcac gtacggggcg cgggacatgc tctcgacccc
      241 gcccgcgacg atcagccccg cctcccccac gcggatcgcg cgggcggcgc tcccgaccgc
      301 gtccattccg gagccgcaca ggcggttgaa cgtcaccccc ggcacctccg gagggaggcc
      361 ggccaggagc cccgccatcc gcgccacgtt ccggttgtcc tctcccgcct ggttcgtgca
      421 cccgtacatc acgtcgtcca cccgccccca atcgacggac gggttccgtt tcatgagctc
      481 gacgaccggc gtcgcggcga ggtcgtcggt ccggatcgcc gacagggcgc cggcgtacct
      541 tccgatcggg gtgcgcaccg cgtcacagat ataggcttcc cccatgtccg tcctccggca
      601 agttgacgtt ctcgactgta tactatcttt cacggcaacg ataagtatcc gataaatatt
      661 acaggaaaat gaccgggcca ttaaacagcg tggacaccgt accgtcagac ggagcaaccg
      721 gaaacggcaa ggagtccggc tcgggggcgg ggccgcggca tgctgcaggc atgctggtcc
      781 tgctcacagc ggcaacgttc gccaacaccc tcccaaacgg atttcacctg gatgacttct
      841 atcgcctcgt ggaaaacccg gccgtccggg tcgtttcgcc gtggtggcgc cacttcgtgg
      901 acgtccacac gatggcgacg ctgccgacca tcaccaacta ccgccccctc ctgcctctca
      961 cattgtccct gaattacgcg atcggcgggc tgcatcccgc cggttaccac atcgtcaata
     1021 tcgccctgca ggcagtggcg gcggtcctcg tgtacctcct gttcgtggaa ctgctcgagc
     1081 agggcagcac cgtgcgaaga aaccttcgac cccgggttgc tctcgcagcg gcagccgtct
     1141 tcgccgtcca cccggtctcg ggcattccgg tcaactacgt cacggcccgc gacctgctgc
     1201 tcatgcaggt gttcatgatc ggggctctcc tcacctacgt ccgcatgcgc ggttccggaa
     1261 gcgacaccct ccgtggctgg gcggcggtcc ttgcgcttta tgtccttgcg ctgttgtcga
     1321 agaccggcgt agtcgtcctg tccgggctcg tggtggcgta cgaggtggcg gtgcggcgcg
     1381 aaagcccgct ttctcccggg gtctggttgc gcaccacgcc cttcgtcgcc ctggcgatcg
     1441 cctttttcgc ctatgtgtcg ctcgtcctga accattccga gatcgatgtc gtccggagca
     1501 acgagtacac tcccgtcgtt tacggcgcca cccagctcaa actccacctc ttccactaca
     1561 tgcggaactt cgtgtggccg tttcccattc gccaggggcc ggaggtcgcc gtggccggcc
     1621 cgttggaccc ggcggccttg gctggagcga tgttcgtgct cttaacatta tccgccgcat
     1681 ggctcgcccg ccgcaccttg ccggtggtca ccttttgcgt gctcgcctac tgggcgctcc
     1741 tgatcccgga ggcgtccatc ttcccactgt gggcgatcgc cacggactac cgcccctacg
     1801 cctcgagccc attcctttac ctgtccatcg ccgtggccgc agcgcagctt gtctcctcga
     1861 accgggcact ccgtgtcgcc gcggtcctca ccgtcgggtg gtcagccgtg acctcggtgt
     1921 acctcaatac gacctggcgc accgagcggt cgttgtggca gcacagcgtc gattacgggg
     1981 gaagcgccct tgcccacttg aacctcggga tgagctacac ggacccggag atcagggcaa
     2041 cgttcctccg cgaggcgatt cgcaaggctc cgaactacat cctcgcccat atgaacctgg
     2101 ggcttgcgct catcgaactg ggtcggcaca gcgaaggatt aacggaatgc ctcatcgccg
     2161 tgtcgatcga cccatatcgc gcacagacgc ggtattggat ggggaaggcc tacgagaagc
     2221 ttgggc
//
LOCUS       DATGYW010000404         2371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_183997, whole genome shotgun sequence.
ACCESSION   DATGYW010000404 DATGYW010000000
VERSION     DATGYW010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183997"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VK429_05645"
     CDS             complement(<1..231)
                     /locus_tag="VK429_05645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012175659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HLN91327.1"
                     /translation="MRRKIYLDFNASTPICPEAVEAMRPFLTDHYGNPSSLHWAGTPA
                     KDAVEKARGQVAGLLGCDPTEVVFTSGGSESNN"
     gene            complement(228..1046)
                     /locus_tag="VK429_05650"
     CDS             complement(228..1046)
                     /locus_tag="VK429_05650"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014808255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HLN91328.1"
                     /translation="MSREVVVRLASFIAVSLAMAAWETAVPRRQRIVSRVIRWPANLG
                     ILLFNSALVRLLFAALPLAIAAKTQEQGWGLLNAYHLSFWMKVACGVILLDFVIYLQH
                     VMFHSVPVLWRLHMMHHADLDFDFTTGGRFHPIEILLSMGIKTAAVAALGPPPIAVLL
                     FEVLLNATSMFNHGNVSLPPAVDGALRFIVVTPDMHRVHHSVIPRETNSNFGFNLPWW
                     DRIAGTYRDQPSMGHDAMTIGLTRFLEAKRQTFLWMLLLPFRETAGGYPKGGSG"
     gene            complement(1072..1878)
                     /locus_tag="VK429_05655"
     CDS             complement(1072..1878)
                     /locus_tag="VK429_05655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009819803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside phosphorylase"
                     /protein_id="HLN91329.1"
                     /translation="MAPSRVQLPLLEHEPSETPVFTAANLLEAARIRKGLPKIAVPAG
                     CLLDFDGELVQHLAATERASEDFAWPCFHTRLFRWRDGSAEYGVIGGTIGAPFAALVA
                     EELFALGCHALVSISSAGLVAEQFAPPFFLLIDRALRDEGTSCHYLPPSRYADSDPSL
                     IAAVLKRTERLSVPVHSGPSWTTDAPFRETESLIASRRREGIVSVEMEAAALLTLGKV
                     LYKPVVCLAHITNTMATREEDFEKGGDAGLADSLSVCAAALEAALDHAIR"
     gene            2006..>2371
                     /locus_tag="VK429_05660"
     CDS             2006..>2371
                     /locus_tag="VK429_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013907789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91330.1"
                     /translation="MCPVYKELYEARKRFGMLFQTGALFDSLTVLENVAFPLREKTVL
                     PEAEIRERVLLLLRKVGLEGTEEKFPDELSGGMVRRVALARAMVMDPEIILFDEPTTG
                     LDPIIRNSILCLICRTYHDH"
BASE COUNT          496 a          706 c          732 g          437 t
ORIGIN      
        1 gttgttcgac tcgcttccgc cgctggtgaa gacgacctcg gtgggatcgc accccaggag
       61 tccggccacc tgtccgcggg ccttttccac ggcatccttc gccggcgtac cggcccagtg
      121 gaggctcgac ggatttccgt aatgatcggt caggaaaggc cgcatggcct ccaccgcttc
      181 cgggcagatc ggtgtgctcg cgttgaaatc aagatagatc ttccgcctca tccactgcct
      241 cctttcggat acccgccggc ggtctctctg aagggtagaa ggagcatcca taggaaggtc
      301 tgccttttcg cctccagaaa ccgggtaagg ccaatggtca tggcgtcgtg ccccatggac
      361 ggctggtccc ggtaggttcc cgcgatccga tcccaccagg gaaggttgaa cccgaaatta
      421 ctgtttgtct cccgcgggat cacggagtgg tgcacccggt gcatgtccgg cgtaacgacg
      481 atgaagcgta aagccccatc aacggcagga gggaggctga catttccatg gttgaacatg
      541 gaggttgcat tgaggaggac ctcgaagagt aggacggcaa tcggcggtgg acccagggcg
      601 gctaccgcag ccgtcttgat ccccatcgag aggaggatct cgatcggatg aaagcgtcca
      661 ccggtcgtga aatcgaaatc gaggtccgcg tggtgcatca tgtggagccg ccaaaggaca
      721 ggcacggagt ggaacatcac atgctgcaga tagatcacga aatcgaggag aattacccca
      781 caggccactt tcatccagaa ggaaagatgg tatgcgttca gcaggcccca cccttgttcc
      841 tgggtttttg cggctatcgc cagcggaagg gctgcaaaca acagcctaac gagcgccgaa
      901 ttgaaaagaa ggatcccaag gttggcgggc cagcggatca ccctggagac gatccgctgg
      961 cggcggggaa ccgcagtctc ccaagccgcc attgcaagcg acaccgcaat gaaggaggcg
     1021 agacgaacga caacctctct gctcatctat ttttcctctc cggcggcaaa atcaacggat
     1081 cgcatgatcc agggcggctt caagagccgc ggcacacacg gagagggaat ccgcaagccc
     1141 cgcatctcca cccttctcga aatcctcctc ccgggttgcc atcgtattgg taatgtgggc
     1201 gaggcacacg acaggcttgt ataggacctt ccccagggtc agtagcgcgg cagcttccat
     1261 ttctacggag acgatcccct cccggcggcg cgaggcgatt aggctctccg tctcccggaa
     1321 gggagcatcc gtggtccatg acgggccgga atgcactggg accgataacc gttccgtgcg
     1381 cttcaagact gcggcgatca acgagggatc agaatcggca taacggcttg gcggtaagta
     1441 gtgacagctt gtcccctcgt cgcgcaatgc cctgtcgatc aggaggaaga agggcggtgc
     1501 aaactgttct gcaacaagcc ctgccgagga gatgcttaca agggcgtggc atccaagggc
     1561 gaacagttcc tcggcgacca gggcggcgaa cggggccccg atcgtgccgc cgatcacgcc
     1621 gtattcggcg ctcccgtccc gccaacggaa gaggcgcgta tggaaacagg gccaggcgaa
     1681 atcctcggac gccctttccg tggcagcgag atgttggaca agttccccat cgaaatccag
     1741 aagacatccg gccgggacgg caatcttggg cagccccttc cggatccgcg ccgcttccag
     1801 caggttcgcc gccgtgaaga cgggcgtttc cgatggctcg tgttccagaa gcggaagctg
     1861 tacgcggctg ggggccatat ctcctcctct tgtgtattgg aacattctaa ccgtaacctc
     1921 cgtaccgggc gagttggccg attatcgacc tgatcaggaa agcgaaggag ggagatacca
     1981 cggccgtcgc cggatcacag ccgggatgtg cccagtatat aaggaactgt acgaggcccg
     2041 gaagcgcttc gggatgctgt tccagaccgg cgccctgttc gactccctga ccgtcctcga
     2101 gaacgtggcg tttcccctgc gggagaagac ggtccttccc gaggcggaga tccgggagcg
     2161 ggttctcctc cttctccgga aggtggggct ggaaggtacg gaggagaaat ttccggacga
     2221 gctttccgga gggatggtgc gccgggtcgc tctggcgcga gcgatggtga tggatcccga
     2281 gatcatcctc ttcgacgaac ccacgaccgg gctggatccg atcattcgga attccatcct
     2341 atgcctcatc tgccggacct accacgatca c
//
LOCUS       DATGYW010000405         2633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_464280, whole genome shotgun sequence.
ACCESSION   DATGYW010000405 DATGYW010000000
VERSION     DATGYW010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464280"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..769)
                     /locus_tag="VK429_05665"
     CDS             complement(<1..769)
                     /locus_tag="VK429_05665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012645267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HLN91331.1"
                     /translation="MLDALFKPKAVAIIGASTKELSIGNVIIRNLQEYGYKGAIYPIN
                     PTAPDVRGIKAYKSLDEIPGAVDLAHIIIPAKLVPQAIEECGKKGVKAAVINSAGFSE
                     MGEEGAKLQAAFLANARKYGVRVFGPNCQGIINTDPALKAYCNFTFTYPEPGSVSVVA
                     LSGGVGALLMQGLFDLGVGMRMYASNGNACDVSIPEILRYWGDDAGCKAIVLYTEGFS
                     DPKEFLDVAREVAAKKPVLAMKAGRTVQGAKAASSHTG"
     gene            complement(771..2018)
                     /locus_tag="VK429_05670"
     CDS             complement(771..2018)
                     /locus_tag="VK429_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015838123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase family protein"
                     /protein_id="HLN91332.1"
                     /translation="MAEEKKTTRKKIQAADRMNRIMADYFYGLNEAATTGKRKVAWCT
                     SVGPAELLQALGFAVHFPENHAAMLGATRTSTDLIPAANAIGYSPDICSYLTADIGAY
                     LKGFTPLAKAYPGIQSVPKPDVLVYNTNQCRDVQDWMAWYSKKLGVPSIGVTSPKNVN
                     EVTDAHIDDVTRQIEALIPTLEGIAGVKLDMDRLREAVSLSRECTELWKQVLETAKAS
                     PAPITFFDGTIHMAPAVVLRGTQQAIDYYKVLLAELEQRIRDGVAAVDGESSRIYWEG
                     MPVWGRLRQHSELFANLKSTVLASTYCSSWIFPSFDGNDPIRSMAKAYLELFIVRSDR
                     YKEKYIKEMIEKFRIDGIIYHDAKTCPYNSNSRYGLPGRVEADTGVPSLVISGDLNDL
                     RLISDEQTKTNIEAFIEQIAEGR"
     gene            complement(2011..>2633)
                     /locus_tag="VK429_05675"
     CDS             complement(2011..>2633)
                     /locus_tag="VK429_05675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012645269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008047 - enzyme activator activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydratase activase"
                     /protein_id="HLN91333.1"
                     /translation="GRANVGFVTAESKTEIGCLSRWGRDRFHEAITIIDIGGQDNKVI
                     KLDQDGRRASFKMNRKCAAGTGAFLEEMSLRLDIPLEAMDGLARQSLEMVKLGSYCTV
                     FSATEVLENIRHGKKVPDIVKGLFYSVVKRVLEMDSHAGRVVMTGGVVAHNPYIVEMA
                     GEMVGRPVVFPEFPQLAGAIGAALYALDETDPTGIRNNIPAGETDG"
BASE COUNT          404 a          862 c          848 g          519 t
ORIGIN      
        1 atcccgtgtg ggaggaggcc gccttcgcgc cctggaccgt gcgcccggct ttcatcgcca
       61 gcacgggctt cttcgccgcg acctcccggg cgacgtcgag gaactccttc gggtcggaga
      121 acccttccgt gtaaaggacg atcgccttgc accccgcatc gtccccccag tagcggagga
      181 tctccgggat cgagacgtcg caggcgttgc cgttggaggc gtacatccgc atgccgacgc
      241 ccaggtcgaa cagcccctgc atgagcaggg cgccgacccc gccgctcagc gccaccacgg
      301 atacggaccc gggctccggg taggtgaagg tgaagttgca gtacgccttc agcgcgggat
      361 cggtgttgat gatcccctgg cagttcgggc cgaacacccg gacgccgtac ttccttgcgt
      421 tggcgaggaa cgccgcctgg agcttcgcgc cctcctcgcc catctcgctg aagccggcgg
      481 agttgatgac ggccgccttg acccccttct ttccgcactc ctcgatcgcc tggggaacca
      541 gcttggcggg gatgatgatg tgcgcgaggt cgaccgctcc cgggatctcg tccagagact
      601 tgtacgcctt gatgccgcgg acgtccgggg ccgtcgggtt gatcgggtag atcgctccct
      661 tgtagccgta ctcctggagg ttccggatga tgacgttccc gatcgacagc tccttggtgg
      721 aggctccgat gatggcgacc gctttcggct tgaacagcgc gtccagcatc ttatctcccc
      781 tccgcgatct gctcgatgaa cgcttcgatg ttcgttttcg tctgctcgtc ggagatgagg
      841 cgaaggtcgt tgaggtcgcc ggagatgacc agggagggga ccccggtgtc ggcctccacc
      901 cgtccgggga ggccgtaccg gctgttcgag ttgtaggggc acgtcttcgc gtcgtggtag
      961 atgatcccgt cgatgcggaa cttctcgatc atctccttta tgtatttctc cttgtaccgg
     1021 tcggagcgga cgatgaacag ttcgaggtac gccttcgcca tgctccggat cgggtcgttc
     1081 ccgtcgaagg acgggaagat ccagctgctg cagtaggtgg aggccaggac ggtcgacttg
     1141 agattcgcga acaactcgga gtgctgccgc aggcgtcccc acacgggcat cccttcccag
     1201 tagatcctgg aggactcccc gtcgacggcc gccacgccat cccggatcct ctgctcgagt
     1261 tcggcgagca ggaccttgta gtagtcgatc gcctgctgcg tcccccgaag gacgaccgcc
     1321 ggcgccatgt ggatcgtccc gtcgaagaag gtgatcgggg cgggggaggc tttcgccgtc
     1381 tcgaggacct gcttccacag ctcggtgcac tcgcgcgaaa gggagaccgc ctcccgcagc
     1441 cggtccatgt cgagtttcac cccggcgatc ccctcgagcg tcgggatcag cgcctcgatc
     1501 tgccgggtaa cgtcgtcgat gtgggcgtcg gtcacctcgt tgacgttctt gggagaggtg
     1561 accccgatgg aggggacccc gagcttcttc gagtaccagg ccatccagtc ctgcacgtcg
     1621 cggcactggt tcgtgttgta gaccaggacg tccggcttcg gcaccgactg gatccccggg
     1681 tacgccttgg cgagcggggt gaaccccttc aggtacgcgc cgatgtcggc cgtgagataa
     1741 gagcagatgt cgggcgaata gccgatcgcg ttcgccgccg ggatgagatc ggtcgacgtc
     1801 cgcgtcgcgc cgagcatggc ggcgtggttt tccgggaagt ggacggcgaa cccgagcgcc
     1861 tggagcagtt ccgccgggcc cacgctggtg caccacgcga ccttccgctt cccggtggtg
     1921 gccgcctcgt tcagcccgta gaagtagtcc gccatgatcc tgttcatccg gtcggcggcc
     1981 tggatcttct ttcgcgtcgt cttcttctct tcagccatcg gtctctcccg cggggatatt
     2041 gttccggatc ccggtcggat ccgtttcatc gagagcgtac agggcggcgc cgatcgcgcc
     2101 ggccagttgc ggaaactcgg ggaacacgac cggccgcccg accatctccc cggccatttc
     2161 gacgatatac ggattgtgcg cgacgactcc ccccgtcatg acgacccggc cggcgtggga
     2221 gtccatctcc agcactctct tgacgaccga gtagaaaagt cccttgacga tatcgggcac
     2281 cttcttcccg tggcggatgt tctcgaggac ctccgtcgcc gaaaagacgg tgcagtagga
     2341 cccgagcttg accatctcca gggactggcg ggccaggccg tccatcgcct ccagggggat
     2401 gtcgagacgc agggacatct cctcgagaaa cgccccggtc cctgccgcgc acttccggtt
     2461 catcttgaaa ctggcccgcc gcccgtcctg gtcgagcttg atgaccttgt tgtcctggcc
     2521 gccgatgtcg atgatggtga tcgcctcgtg gaaacggtcg cggccccacc gggagaggca
     2581 gccgatctcg gtcttgctct ccgcggtgac gaagccgacg ttggcccggc cgt
//
LOCUS       DATGYW010000406         1995 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_464341, whole genome shotgun sequence.
ACCESSION   DATGYW010000406 DATGYW010000000
VERSION     DATGYW010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1995)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1995)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1995
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464341"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1515
                     /locus_tag="VK429_05680"
     CDS             <1..1515
                     /locus_tag="VK429_05680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018196460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLN91334.1"
                     /translation="EVHHGVRIKDSALIAAATLSHRYISDRFLPDKAIDLVDEAASRL
                     KIEIDSVPTEIDEVERRKTQLEIERQALLKETDPASRERLSGIESELSELSGKIAALR
                     GRWEAEKREITGNRAVKERIEQTLQEMQRAEREGNLEKASQLKYGVLPALRKQVEEAS
                     RAAERSKDRLLKEEVDEEDVAQIVSRWTGIPVTRLVEGEVSKLLKMEERLSARVVGQE
                     EAVGLVASAVRRARSGLKDPRRPIGSFLFLGPTGVGKTELARALAQFLFDDEAAMVRL
                     DMSEYMEKHSVARMIGAPPGYVGYEEGGALTEAIRRKPYAVILFDEVEKAHPDVFNIL
                     LQVLEDGRLTDGQGRTVDFRNAVVILTSNVGSHWIQELAGKGEEVIRDRVMEELRRTF
                     RPEFLNRLDEIVLFHSLGKEELSRIVDIMVRELNDRLADRKISISLNPAAKSRIAEIG
                     FDPAYGARPLRRALQKRIEDPLATRILEGEFPEGSRVTVDTDPKGGFTFTRSAA"
     gene            1612..>1995
                     /locus_tag="VK429_05685"
     CDS             1612..>1995
                     /locus_tag="VK429_05685"
                     /inference="COORDINATES: protein motif:HMM:NF012509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HLN91335.1"
                     /translation="MASAVSFLAPAKLNLSLQVFGKRPDGYHHIRSVMVPVSLYDEVT
                     VEEAAAGISVECDAPGVPTDTANSCHKAAALFLAWAGTPAGVRIRIRKAIPPESGLGG
                     GSSDAAAALKGLIALTGKHPPPEALL"
BASE COUNT          350 a          636 c          706 g          303 t
ORIGIN      
        1 gaggtgcacc acggcgtgcg gatcaaggat tccgcactga tcgccgccgc cacgttgtcc
       61 caccggtaca tttccgaccg gttcctcccc gacaaggcga tcgaccttgt ggacgaggcg
      121 gcgtcccgcc tgaagatcga gatcgactcc gttcccacgg agatcgacga ggtggagcgt
      181 cgcaagaccc agctcgagat cgagcggcag gcgctgctga aggagaccga cccggcgtcg
      241 cgggagcggc tctcggggat cgaatcggag ctgtcggagc tttccgggaa gatcgccgcg
      301 ttgcgcggcc ggtgggaggc ggagaagcgg gagatcaccg ggaaccgggc ggtcaaggag
      361 cggatcgagc agaccctcca ggagatgcag cgggcggaga gggaggggaa cctcgagaag
      421 gcgtcgcaac tgaagtacgg tgtcctccct gccctacgaa agcaggtcga ggaggcgtcg
      481 cgggcggcgg agcgctcgaa ggaccgcctt ctcaaggagg aggtggacga ggaggacgtg
      541 gcgcagatcg tctcccggtg gacgggaatc cccgtcaccc ggctggtcga gggggaggtg
      601 agcaagctcc tcaagatgga ggagcgcctt tccgcgaggg tggtgggcca ggaagaggcg
      661 gtcgggctcg tggccagcgc ggtgcgacgc gcccggtccg ggctgaagga cccgcgccgc
      721 cccatcgggt cgtttctctt cctcgggccg accggtgtcg gaaagacgga gctcgcccgg
      781 gccctcgcgc agttcctgtt cgacgacgag gccgccatgg tgcgcctcga catgtccgag
      841 tacatggaga agcattcggt cgcccggatg atcggcgcgc cgccggggta cgtagggtac
      901 gaggaggggg gagccctcac cgaggcgatc cgccgcaaac cgtacgcggt gatcctgttc
      961 gacgaggtcg agaaggcgca ccccgacgtc ttcaacatcc tcttgcaagt tctcgaagac
     1021 ggccggctga ccgacggcca ggggcggacg gtcgacttcc gcaacgccgt ggtcatcctc
     1081 acctccaacg tgggctcgca ctggatccag gagctcgcgg ggaaggggga agaggtgatc
     1141 cgcgaccgcg tgatggagga gcttcgccgc accttccggc ccgagttcct gaaccggctc
     1201 gacgagatcg tcctgttcca ctccctcggg aaggaggagc tctcccggat cgtggacatc
     1261 atggtgcggg agctgaacga ccgcctcgcg gacaggaaga tctcgatctc cctgaacccc
     1321 gcggcgaagt cccggatcgc ggagatcggg ttcgaccccg cgtacggggc caggccactg
     1381 cggcgcgccc tccagaaacg gatcgaggac cccctcgcga cgcgcatcct cgagggggag
     1441 ttccccgagg ggagccgggt gacggtcgac accgacccga aagggggctt caccttcacc
     1501 cgttccgccg cgtaggcaag ccattctgcc cattaccgac accggctctt gacaaggatc
     1561 cccattgcct gtaccttgat ttgaaaacag cgtttgaaaa ggtactcttc gatggcatcc
     1621 gccgtttcct tcctcgcccc ggccaagttg aatctctccc tgcaggtgtt cgggaaacgc
     1681 cccgacgggt accaccacat ccgttccgtc atggtgccgg tctccctgta cgacgaggtg
     1741 accgtcgagg aggctgccgc ggggatctcc gtggaatgcg acgcgccggg ggtcccgacc
     1801 gacaccgcga acagctgcca caaggccgcc gccctcttcc ttgcctgggc ggggaccccc
     1861 gcgggggtgc ggatccggat ccggaaggcg atcccacccg agtcggggtt ggggggggga
     1921 agttccgacg cggcggcggc gctgaaaggg ttgatcgcct tgaccgggaa gcaccctccc
     1981 ccggaagcgt tgctg
//
LOCUS       DATGYW010000407         1589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_131185, whole genome shotgun sequence.
ACCESSION   DATGYW010000407 DATGYW010000000
VERSION     DATGYW010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131185"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="VK429_05690"
     CDS             <1..246
                     /locus_tag="VK429_05690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004511758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PtsA"
                     /protein_id="HLN91336.1"
                     /translation="ILLAMSRIVGETAPLLFTALGNQFWQTKLDQPMAAMPLQVFTYA
                     ISPYEDWHDKAWAGALVLITMVFLINIAARVLTREKR"
     gene            262..1023
                     /gene="pstB"
                     /locus_tag="VK429_05695"
     CDS             262..1023
                     /gene="pstB"
                     /locus_tag="VK429_05695"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015896097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HLN91337.1"
                     /translation="MDIVFEIRDLSGWFGENQVLKKIRMDIGKNSVTSVMGPSGCGKS
                     TFIRCLNRMHDMTPGFRMSGEILLDGTNIHSEKVDPVYLRRRVGMVFQQPNPFPRMSV
                     FENVAVGLKLNGRKLSREDISEKVERSLVMAALWNEVKDHLTQPGVSLSGGQQQRLCI
                     ARALAVEPEVLLMDEPCSALDPMSTAKIEDLIEDLSEKYTIVVVTHNMQQAARISDQV
                     AFFLMGELIEMDKSGKIFTNPSDKRTEQYITGRFG"
     gene            1050..>1589
                     /gene="phoU"
                     /locus_tag="VK429_05700"
     CDS             1050..>1589
                     /gene="phoU"
                     /locus_tag="VK429_05700"
                     /inference="COORDINATES: protein motif:HMM:TIGR02135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HLN91338.1"
                     /translation="MKKHYGEQLTGLREQVLRMGGLVEQMTRRVIQALVDRDVGILPE
                     VREMETRVNQLHIEIDEACIELIALRQPAAVDLRFIAAAMKINSDMERIGDQAINITQ
                     RSESLLAVPTLKPLIDIPRMADIAQEMLKASLDAFVNGDDALAYATILKDDEVDQLKD
                     QVFRELLTFMMSDPTTIPRA"
BASE COUNT          326 a          491 c          511 g          261 t
ORIGIN      
        1 atcctcctcg ccatgtcgcg catcgtaggg gagacggcgc cccttctgtt caccgcgctg
       61 gggaaccagt tctggcagac gaagctcgac cagccgatgg cggcgatgcc gctccaggtc
      121 ttcacatatg cgatctcccc ctacgaggac tggcacgaca aggcgtgggc gggggctctc
      181 gtgctgatca cgatggtttt tctgatcaac atcgccgccc gggttctcac ccgggagaaa
      241 cggtagaagg aaggaagccg gatggatatc gtcttcgaga tccgcgacct cagcggctgg
      301 ttcggggaaa accaggtgct gaagaagatc cggatggaca tcgggaaaaa ctccgtcacc
      361 tcggtgatgg gtccctcggg gtgcgggaag agcaccttca tccggtgcct caaccggatg
      421 cacgacatga ccccgggatt ccggatgtcg ggggagatcc ttctcgacgg gacgaacatc
      481 cactcggaga aggtcgaccc ggtgtacctc cgccggcggg tcgggatggt cttccagcag
      541 ccgaacccgt tcccccgcat gtcggtgttc gagaacgtcg ccgtcgggct caaactgaac
      601 ggaaggaagc tctcccggga ggacatctcc gagaaggtgg agcggtcgct cgtcatggcg
      661 gcactctgga acgaggtgaa ggatcacctc acccagccgg gggtatccct ctccggcgga
      721 cagcagcagc gcctttgcat cgcccgggcc ctcgccgtcg agccggaagt gctcctgatg
      781 gacgagccgt gctcggcgct ggacccgatg tccaccgcga agatcgagga tctcatcgag
      841 gatctgagcg aaaaatacac gatcgtcgtc gtcacgcaca acatgcagca ggctgcgcgc
      901 atctccgacc aggtcgcatt cttcctgatg ggggaactga tcgagatgga caagagcggg
      961 aagatcttca ccaacccctc ggacaagcgg acggagcagt acattaccgg gcggttcggt
     1021 tgacacttac cggaaggcgg tgaacgggga tgaagaaaca ttacggagaa cagctgacgg
     1081 ggcttcgaga acaggtcctc cgcatgggag ggctggtgga acagatgacg cggcgggtca
     1141 tccaggcgct cgtcgaccgc gacgtcggaa tcctccccga ggtccgggag atggagaccc
     1201 gggtcaacca gctccacatc gagatcgacg aggcgtgcat cgagctcatc gcgctgcgcc
     1261 aaccggcggc cgtcgatctc cgcttcatcg ccgcggcgat gaagatcaac tcggacatgg
     1321 agcggatcgg cgaccaggcg atcaacatca cccagcggtc ggagtcgctc ctcgccgtcc
     1381 cgacgctcaa accgctgatc gacatccccc ggatggccga catcgcccag gagatgctga
     1441 aggcctccct ggacgccttc gtgaacgggg acgacgcgct tgcgtacgcg acgatcctga
     1501 aggacgacga ggtcgaccag ttgaaggacc aggtcttccg ggagctcctg accttcatga
     1561 tgtcggaccc gaccaccatc ccgcgggcg
//
LOCUS       DATGYW010000408         2816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_305023, whole genome shotgun sequence.
ACCESSION   DATGYW010000408 DATGYW010000000
VERSION     DATGYW010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2816
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305023"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1395)
                     /locus_tag="VK429_05705"
     CDS             complement(<1..1395)
                     /locus_tag="VK429_05705"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HLN91339.1"
                     /translation="MTPRADGKMLRRIVAAAIVLLVGGALATAVVAAPRHQLSPPTRS
                     APDSGGGAFDHGFSPADLHTLLQAGRPDGLLPNGNRVTLSLNEELQAQIFELFRRFNP
                     LYGVFAAMEPDTGRVVALIGYRRGGESDPWLPLKAIYPAASLIKVVTASAAIERGKVS
                     PQDEISYRGGIYGITRGGIHARDGRGTPSMTLEEAIARSANAVFGKVAVNHVGGPVLE
                     EYLAKFGFGEKIPFDLPVESSRAEVPREEFELARTGAGFGEVYVSPLHMAMIMSAIAS
                     GGAMPRPVLIDRIEDRDGMPLYESSPVKWRDTVLPETANAVVRMMVKTVEMGTSHRTF
                     GSPERTPLLHDMDVAGKTGSLSGWTPAVHFEWFAGVAPVGSPRLALAALVVNDNRWKI
                     KGSYVGKEAFNSYFGYPSSMPPIYAKAGATRKVSAKSRSVKKKETTARKKAGKGKKPA
                     KARKRSPRKTAGKAP"
     gene            complement(1392..2126)
                     /locus_tag="VK429_05710"
     CDS             complement(1392..2126)
                     /locus_tag="VK429_05710"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLN91340.1"
                     /translation="MAFYSDISLVYDDLFPVSPEQRALFDSLMDDGGARTVVDCGCGT
                     GSQLQPFAVAGLSCFGFDPDPSLVAIARRKLASYPKTRVETGSFSDLARLVTSPSDLL
                     MCLGNSLVHVPQEEESRFLVDASGVLSRSGTLLLQILNYERLLRERATELPLIRASEG
                     TIEFRRRYEWEGDRKVLFRTSLRFAGADEPRIVRNEIPLYPVYPDELWEMLANAGFGD
                     IRFYGDFARSEFSPGSEALVCLARKA"
     gene            complement(2326..>2816)
                     /locus_tag="VK429_05715"
     CDS             complement(2326..>2816)
                     /locus_tag="VK429_05715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91341.1"
                     /translation="AVSAGTAETVLLADKDGGDGGDTNIDLAVRQVTVAPVRAHAGDV
                     IHVDVVIENKAEGMRTTNAELLVNGKAVARQLFTWGLSAGQRLYRLSFVWDTRGIPPG
                     EYRVGAQVFVWEDSSPFDNRLDVAQPVVIAPAGGEFPGGGKAGGSATETDPRFGKSII
                     GG"
BASE COUNT          475 a          994 c          890 g          457 t
ORIGIN      
        1 gggcgccttc ccggcggtct tccttggcga ccgcttgcgg gctttcgccg gctttttccc
       61 cttcccggcc ttcttccggg ccgtcgtctc cttcttcttg acggaccggg acttcgcgct
      121 caccttccgg gtcgcgccgg ccttcgcgta gatgggcggc atcgacgagg ggtacccgaa
      181 gtaggagttg aacgcctcct tccccacgta gcttcccttg atcttccacc ggttgtcgtt
      241 gaccacgagc gccgccagcg ccagccgcgg cgacccgacg ggcgcgaccc cggcgaacca
      301 ttcgaagtgg acggccggcg tccacccgga gagcgacccg gtcttccccg cgacgtccat
      361 gtcgtgcagc agcggggtgc gctcggggct tccgaacgtc cggtgcgacg tccccatctc
      421 gaccgtcttc accatcatcc ggacgacggc gttcgccgtc tcggggagga ccgtgtcccg
      481 ccatttcacc ggggaggact cgtacagcgg catcccgtcg cggtcctcga tccggtcgat
      541 gaggacgggg cgcggcatgg cgccgcccga agcgatcgcg gacatgatca tcgccatgtg
      601 gagcggggag acgtacacct cgccgaaccc cgcgccggtg cgggcgagct cgaattcctc
      661 cctcggcacc tccgcccggc tcgactccac cgggaggtcg aaggggatct tctcgccgaa
      721 tccgaacttg gccaggtact cctcgagcac cggcccgccg acgtggttga ccgccacctt
      781 cccgaacacg gcgttggcgg agcgggcgat cgcctcctcg agggtcatgc tcggggtccc
      841 cctcccgtcc cgggcgtgaa taccgccgcg cgtgatgccg tagatcccgc cgcggtagct
      901 gatttcgtcc tggggggaaa ccttcccgcg ctcgatggca gcggaagcgg tgaccacctt
      961 gatcagggag gcggcggggt agatcgcctt caacggcagc cacgggtcgg actcgccgcc
     1021 ccggcggtac ccgatgaggg cgaccacgcg cccggtgtcc ggctccatcg cggcgaacac
     1081 gccgtacagg gggttgaacc gacggaacag ctcgaagatc tgcgcctgga gctcctcgtt
     1141 cagggagagc gtcacccggt ttccgttcgg aaggaggcca tccggccgcc cggcctgcag
     1201 gagggtgtgg agatccgcgg gggagaaccc gtgatcgaac gcgcctccgc cggaatcggg
     1261 cgcggagcgt gtgggcgggg aaagctggtg gcggggcgcg gccacgaccg ccgtcgcaag
     1321 cgccccgcct acgagcagga cgatcgccgc cgccacgatc cggcgaagca tcttaccgtc
     1381 cgctcgaggc gtcacgcttt cctcgccagg cacaccagcg cctcggaacc gggggaaaat
     1441 tcggaccgcg cgaaatcccc gtagaaacgg atatcgccga aacccgcgtt cgccagcatc
     1501 tcccacagct cgtcggggta gaccgggtac agcgggatct cgttccgcac gatccgcggc
     1561 tcgtccgcgc cggcgaaccg gagggaggtc cggaagagca ccttgcggtc gccttcccat
     1621 tcgtacctcc ttcggaattc gatcgtacct tcggacgccc ggatcaacgg cagctcggtc
     1681 gcccgttcgc gcaggagccg ttcgtagttc aggatctgga gcaggagcgt gccggaacgg
     1741 gaaagcacgc ccgatgcgtc cacgagaaac cgggactcct cctcctgcgg gacgtgaacc
     1801 agcgagttgc cgaggcacat caagagatcg gagggggacg tgacaagacg cgccaggtcc
     1861 gaaaacgatc ccgtctcgac ccgggttttc gggtacgagg cgagcttgcg ccgcgcgatg
     1921 gcgaccagcg acgggtcggg atcgaatccg aagcaggaaa gtccggcgac ggcgaacggc
     1981 tggagctgcg atccggtccc gcacccgcag tcgacgacgg tgcgcgcccc cccgtcatcc
     2041 atcagggagt cgaagagagc ccgctgttcc ggagacaccg ggaacaggtc gtcgtagacc
     2101 aggctgatat ccgaatagaa cgccaactac cctcctcggg ggcattgtaa cagcatcgat
     2161 cccccatgaa acaaaaaaac gccccacttg cccgaaaaaa ggaggttctc cgaaacgact
     2221 tgaacccctt gcatcccttc ttcgggaaag cttttacggg tcttttatcg gcaaatcctc
     2281 gacgtatctt taatgactcc tgcggttgag gagatcgaaa cggtgttatc cgccgatgat
     2341 cgatttcccg aaccgcggat ccgtctccgt cgcgcttccg cccgcctttc ccccgccggg
     2401 gaattcgccg ccggccggcg cgatcaccac cggttgcgcc acgtccaggc ggttatcgaa
     2461 gggggacgaa tcctcccaga cgaagacctg cgccccgacc cgatactctc cggggggaat
     2521 cccccgggtg tcccagacaa acgacaaccg gtacagccgc tgcccggcgg acagccccca
     2581 ggtgaagagc tgccgcgcca ccgccttccc gttgaccagc agctcggcgt tcgtggtccg
     2641 catcccctcg gccttgttct cgatcaccac gtcgacgtgg atcacgtccc ccgcatgggc
     2701 gcgcaccggg gcgaccgtca cctgccggac cgccaggtcg atattcgtat ctccgccgtc
     2761 tcccccatcc ttatccgcca ggagaacggt ttccgccgtc cccgcggaca ccgctc
//
LOCUS       DATGYW010000409         2301 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_131197, whole genome shotgun sequence.
ACCESSION   DATGYW010000409 DATGYW010000000
VERSION     DATGYW010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2301)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2301)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2301
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131197"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1574)
                     /gene="leuS"
                     /locus_tag="VK429_05720"
                     /pseudo
     CDS             complement(1..1574)
                     /gene="leuS"
                     /locus_tag="VK429_05720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011792507.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
     gene            complement(1571..1993)
                     /gene="nusB"
                     /locus_tag="VK429_05725"
     CDS             complement(1571..1993)
                     /gene="nusB"
                     /locus_tag="VK429_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011698244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HLN91342.1"
                     /translation="MRRESREKVFQTLFMMDALGVGPDEAIPLFALSSDPPTDAGYYA
                     EAVRGVWGRIGEIDALIGEAAENWRIERMTLVDRNILRLGAYELSPGSDIPVAVAINE
                     AVELGKRFGSEESGAFINGILDRISGIVRKKTTAEGTA"
     gene            complement(2025..>2301)
                     /gene="ribH"
                     /locus_tag="VK429_05730"
     CDS             complement(2025..>2301)
                     /gene="ribH"
                     /locus_tag="VK429_05730"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008224150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HLN91343.1"
                     /translation="GVRRAAGQKVDAVIALGALIRGGTPHFDYLSAEVTKGVAHVMLE
                     TGIPVAFGVLTTDTVEQAIERAGTKSGNKGAEAAQSALEMVSLLRKM"
BASE COUNT          339 a          850 c          710 g          402 t
ORIGIN      
        1 ttttccgggt cgagcggcgc gcggtcgttc ttcgggtcga tgtaccgaag gaagtaccag
       61 gaggactcga caaaggtatc gaacgtatcg gtctcccggc ggccgggctt cccgcaggag
      121 gggcacggca cgcggagcca atcctccgct ccggccagcg ggttcccccg ctcccgcgtg
      181 tacgggaggt cctccggaag caccaccggc aggtccttct ccgggacggg gacgatgccg
      241 cacgcctcgc agtggatcac cgggatcggg caaccccagt accgctgccg gctgacgccc
      301 cagtcgcgaa gccggtactg gaccgtcccg cggcccatcc ccttcccttc aaggtgaacc
      361 gtgatcgccc tcttcccctc gtcgctcggg atcccgtcga acgcgccgga gcggaccagg
      421 cgccccggcc cctcgtgcgc cgcgctcatc gtctccgaat cgagcggctc cccctcgggc
      481 tgcacgaccg tcacgaccgg caggccgtat ttacgggcaa actcgaagtc gcgctggtcg
      541 tgcgccggca ccgccatcac cgcgccggtg ccgtagtcgt acaggacgaa gttcgcggcg
      601 tagaccggga tccggttccc cgtgacgggg ttcacgcaga accccccggt gaacaccccc
      661 tacttcacga ggtcctcgct cgtccgggcg atccggtcct gggccgcgac ccggtcgacg
      721 aactcccgca cctcgcgctc cctgccggcc tgcttcgcga actccatcac catcgggtgc
      781 tcgggggcca tgctcatgaa cgtggcgccg aagagcgtgt cgggccgcgt cgtgaacacc
      841 gtgatgtcgc cgcccccccc gtcgagcgga aagcggatct ccgccccctc gctgcggccg
      901 atccagttcc gctgcatctc gaggatgttc gccggccacc gaccctcgag ctccttgtgc
      961 ccggagagca gctcctcggc gtacttcgtg atgccgagga accactggtc gagctccttc
     1021 tgggccaccg gcgtctggtc gtggatgaag cacgtcccgt cgccgttcac ctgttcgttg
     1081 gcgagaacgg tctggcactc cccgcaccag ttgagcgtgg cgcgcttgcg gtacgcgagg
     1141 ccgtcccgga gcatccacag gaaaaagagc tgttcccatc ggtaatactc cggggaacag
     1201 gtcgcgaact cgcggtccca gtcgtaggag atccccatct ccttcagctg gccccgcatg
     1261 aaggcgatgt tctcccacgt ccatttcgcc gggtgcgtcc cgtgccggtg cgccgcgttt
     1321 tcggcgggca gcccgaaggc gtcccatccg atcgggtgaa ggacctggaa tccctgcatc
     1381 ctcttgaagc gcgcgagcag gtcgccgatc gtgtacaccc gcacgtgccc catgtggatc
     1441 cggccggaag ggtacgggaa catctcgagg cagtaatatt tcggggcgga cagcgcgtcc
     1501 gggcaccgga acacgccggc ctcttcccac ctccgctgcc acttccgctc gatctcctgc
     1561 ggcttgtact tcacgccgtt ccctccgccg ttgtcttctt ccgcacgatt ccggagatcc
     1621 tgtcgaggat cccgttgatg aaggcgccgg actcctcgga gccgaaccgc ttgccgagct
     1681 cgaccgcctc gttgatcgcc accgcgaccg ggatgtcgct ccccggggag agttcgtacg
     1741 ccccgaggcg caggatgttc cggtcgacga gcgtcattct ttcgatccgc cagttctccg
     1801 ctgcctcccc gatgagggca tcgatctccc cgatgcggcc ccacacgccg cgcaccgcct
     1861 ccgcgtagta gcccgcgtcg gtgggaggat cggaggacaa cgcgaaaagg ggtatggcct
     1921 cgtccgggcc aacccctagc gcgtccatca tgaagagggt ctggaaaacc ttctcccggg
     1981 attccctgcg cacgaaaggt tcgctttccc cgggaccgtc ccgctcacat cttgcggagc
     2041 aggctgacca tctcgagggc ggactgggcc gcctcggccc ccttgttccc cgacttggtt
     2101 cctgcccgct cgatggcctg ctccacggtg tccgtcgtga gcaccccgaa cgcgacgggg
     2161 atccccgtct ccagcatcac gtgggcgact cccttggtga cctcggcgct caggtagtcg
     2221 aagtgcgggg tgcctccccg gatcagcgcg cccagcgcga tcaccgcgtc gaccttctgt
     2281 cccgccgccc gccggacgcc c
//
LOCUS       DATGYW010000410         1578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_503190, whole genome shotgun sequence.
ACCESSION   DATGYW010000410 DATGYW010000000
VERSION     DATGYW010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_503190"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VK429_05735"
     CDS             complement(<1..263)
                     /locus_tag="VK429_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLN91344.1"
                     /translation="MRAPLADRMRPAALSDFIGQEELLGEGKFLSSVLSARPLPSLIF
                     WGPPGSGKTTLARILAVETNAVFLPYSAVLSGIKEIREALAEL"
     gene            356..>1578
                     /locus_tag="VK429_05740"
     CDS             356..>1578
                     /locus_tag="VK429_05740"
                     /inference="COORDINATES: protein motif:HMM:NF024852.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HLN91345.1"
                     /translation="MSENGKTSVLLVAPTSYLGWRLMLKLLERPEVRLRVLVADRRNL
                     GGFPSAAPEIIVGDIFDEGVLRRAAEGIDAAYFPVRFLGTDPEFDRQVKVFAAKFRDA
                     CAAEGVGRIIFLGVLTRKESGNDTIQAMIDVGEILSARPERIPTVWLRAGFILGSGSL
                     LFEVLSNLVQKLPVLPTPRWMETRISVIGARDLQEYLVQAMTIPLSGNIEVEVGLPPR
                     SLRDMLAATARVMGLSRAFLPVPFNAMRLSPAVLTLLTSFSAPLSSVFIRLVVTAGKT
                     HGDIPQENARRHFPGIVPASFEEVVSRAVEATRQEEVISRWTDSIDPVAASDEEKGMS
                     RSMFKDVRRESFGTVAPEKIFRAVKSIGGKEGWFNFDLLWRIRGAMDKLTGGYGVSVG
                     RRAEGDLRVGDILDV"
BASE COUNT          257 a          489 c          560 g          272 t
ORIGIN      
        1 ttcagctcgg ccagcgcctc gcggatctcc ttgatccccg acaggacggc ggaatacgga
       61 aggaagacgg cgttcgtttc cactgcgagg atccgggcga gagtcgtttt ccccgagccg
      121 ggcggtcccc agaagatgag cgaggggagc gggcgcgcgg agagcaccga ggagaggaac
      181 ttcccctccc ccagcagctc ctcctgcccg atgaagtcgg agagggcggc gggacgcatc
      241 cggtcggcca gcggcgcgcg catgttattc acgattacct ccgtttcgca tattatgcct
      301 tagtggttca gttcatgatt tatgaattaa ccccctggga ggagccggat atcggatgag
      361 tgaaaacggg aaaacgagcg tcctgctggt ggcgccgacg agctacctcg ggtggcggct
      421 gatgctcaag ctgctggaga ggccggaagt ccgcctccgg gtcctcgtgg ccgaccgcag
      481 gaacctcggc ggattcccga gtgccgcccc ggagatcatc gtgggggaca tcttcgacga
      541 gggggtcctg cggcgcgcgg ccgaggggat cgacgcggcg tacttcccgg tccggttcct
      601 gggcacggac cccgagttcg accggcaggt gaaggtcttc gccgcgaagt tccgggacgc
      661 gtgcgccgcc gagggtgtcg ggaggatcat cttcctgggg gtgttaacga ggaaggaatc
      721 ggggaacgat accatccagg cgatgatcga cgtcggggag atcctgagcg cccgcccgga
      781 gcggatcccc acggtgtggc ttcgggccgg cttcatcctc ggctcgggca gtctcctctt
      841 cgaggtgctg agcaacctgg tccagaagct tcccgtcctt cccacccccc ggtggatgga
      901 gacgaggatc tccgtgatcg gcgcgcggga tctgcaggag tacctcgtcc aggcgatgac
      961 gatccctctt tccgggaaca tcgaggtgga ggtcggcctc ccgccgcgca gcctgcggga
     1021 catgctcgcc gccaccgccc gcgtcatggg gctttcgcgg gcgttcctcc ccgtgccgtt
     1081 caacgcgatg cggctgtcgc ccgccgtgct cacgctgctc acgtcttttt ccgcccccct
     1141 ctcgtcggtg ttcatccggc tggtcgtcac cgcggggaag acccacgggg acatcccgca
     1201 ggagaacgcg cggcgccact tccccgggat cgtcccggcg tcgttcgagg aggtggtttc
     1261 gcgggcggtc gaggcgacca gacaggagga ggtaatcagc cggtggaccg acagcatcga
     1321 cccggtcgcc gcatccgacg aggaaaaggg gatgtcccgc tccatgttca aggacgtccg
     1381 cagggagagt ttcgggaccg tcgccccgga gaagatcttc cgggcggtga agtcgatcgg
     1441 gggaaaagag ggctggttca acttcgacct cctctggcgg atccgcggcg ccatggacaa
     1501 gcttacggga gggtacgggg tatcggtcgg gcggagggcg gagggggacc tccgggtggg
     1561 cgacatcctc gacgtctg
//
LOCUS       DATGYW010000411         1510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_503356, whole genome shotgun sequence.
ACCESSION   DATGYW010000411 DATGYW010000000
VERSION     DATGYW010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_503356"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            34..1473
                     /locus_tag="VK429_05745"
     CDS             34..1473
                     /locus_tag="VK429_05745"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF013180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HLN91346.1"
                     /translation="MPSDFARKAGEILRATKPIEERLREFSGELSAWLGGGTVSVLLF
                     DRDSEDFYVRTSTLRVTPGAPEFHFPAEGSLEELSLAEHRPIILSEGKRPENSRKRGT
                     VLMFPLLSSGEPNGVLVVQTVTEEEFPEEKLSAVTDAAVLLSDTVGVSLREESAALRM
                     TKIAAINEAGINIISTLDLSRLLKLVATSACLILEAETCVIRLLDPETGKYGIREYYG
                     MKTEGEQKDLFLMDKKAVTSVLKGESSVLVRDASQEPGWQDFAGVARTLACVPLRGDG
                     EILGTVTIFDKFPHKTFFPSSFTTEDLATLGKFLKYAEKAVVNAIAYERNDRLRNLDE
                     TTSLPTLKYFQERLLHEISRAKRFRRRLVLMICEVQAHVPAGSHSRAGRADWVMKQVA
                     KAIRATLREYDVVARISEAKFGMILPEAEDGKISAIPRIKKAIAAEAEEIRRRARDAR
                     IDVKFGHAAFPEDGDDHEKLIFKSNILKN"
BASE COUNT          279 a          482 c          507 g          242 t
ORIGIN      
        1 tgcggatccg ggtgacgatg gatgggggat agagtgccct ccgatttcgc gaggaaggcc
       61 ggggagatcc tccgggcgac gaagccgatc gaggaacgtc tgcgggagtt ctccggcgag
      121 ctctccgcct ggctgggcgg ggggaccgtt tccgtcctcc tgttcgaccg cgacagcgag
      181 gatttctacg ttcgcaccag caccctccgc gtgacgccgg gcgcaccgga attccacttc
      241 ccggcggagg gctccctcga ggaactcagc ctcgccgagc atcgtcccat catcctctcg
      301 gaggggaaaa ggccggagaa cagccgcaag cgggggacgg tgctcatgtt cccgctcctc
      361 tcctccgggg agcccaacgg ggtactcgtc gtgcagacgg tcaccgagga ggagttcccc
      421 gaggagaagc tgtcggcggt caccgatgct gccgtcctcc tctcggacac ggtgggggtg
      481 tcgctgcgag aggagtccgc cgccctccgg atgacgaaga tcgccgcaat caacgaggcg
      541 gggatcaaca tcatttcgac cctcgacctg tccaggcttc tcaagctggt ggccacctcc
      601 gcctgcctca tcctcgaggc cgagacgtgc gtcatccgcc tgctcgatcc ggaaaccggg
      661 aagtacggga ttcgcgagta ttacgggatg aagacggaag gggagcagaa ggacctcttc
      721 ctcatggaca agaaggcggt cacctccgtt ctcaaggggg agtcgtccgt gctcgtacgc
      781 gacgcctcgc aggagccggg ctggcaggac tttgccgggg tcgcccggac gctcgcgtgc
      841 gtccctctcc gcggggacgg ggagatcctc gggaccgtca cgatcttcga caagttcccc
      901 cacaagacgt ttttcccctc ctcgttcacc accgaggacc tcgccacgtt aggaaaattc
      961 ctcaagtacg ccgagaaggc ggtcgtgaac gcgatcgcct acgagcggaa cgaccggctg
     1021 aggaacctcg acgagacgac ctcgctgccc acgctgaaat atttccagga gcgactgctg
     1081 cacgagatca gccgggcgaa gcggttccgg cggcgcctcg tcctgatgat ctgcgaggtc
     1141 caggcgcatg tgccggcggg gtcgcattcc cgggccggtc gcgcggactg ggtgatgaag
     1201 caggtggcga aggcgatccg cgccaccctt cgcgaatacg acgtcgtggc ccggatcagc
     1261 gaggcgaagt tcgggatgat cctgcccgag gcggaagacg gcaagatcag cgcgatccca
     1321 cgcatcaaga aggcgatcgc cgccgaggcc gaggagatcc gtcgccgcgc cagggatgcg
     1381 cggatcgatg tgaagttcgg ccacgccgcg ttcccggagg acggcgacga ccacgagaag
     1441 ctgatcttca agtcgaacat cctgaagaac tgaggggcac cgcgtgatcc gcgccgccgt
     1501 ggtcaccatg
//
LOCUS       DATGYW010000412         2178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_411200, whole genome shotgun sequence.
ACCESSION   DATGYW010000412 DATGYW010000000
VERSION     DATGYW010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411200"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..1058
                     /gene="pstC"
                     /locus_tag="VK429_05750"
     CDS             129..1058
                     /gene="pstC"
                     /locus_tag="VK429_05750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011366086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HLN91347.1"
                     /translation="MARKTGGNIKDLLFERTTGGFAFLVLFLAVLLFAVLLRESVPAL
                     RKFGASFLVTGTWDPVLEQFGALPFLYGTVVSSTLALLIAVPLSVGAAIFINEFAPPW
                     LKAPVSLLAELLAAIPSVIYGLWGIFVLVPILRDGFMKPVTKTVGWIPFFKGPVYGPS
                     MLAAGVLLAIMIIPFILSVSREVLATVPQRQKEAVLSLGGTRWEMIRIVIGQHCLPGI
                     FGAAILGLGRALGETMAVTMVIGNRPEIFVSLFQQGYSMAAVIANEFAEAGGLQLSSL
                     ILIGLLLMLVTLVVNLAAKRILSKMVARASRGI"
     gene            1060..1899
                     /gene="pstA"
                     /locus_tag="VK429_05755"
     CDS             1060..1899
                     /gene="pstA"
                     /locus_tag="VK429_05755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012530282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HLN91348.1"
                     /translation="MTGTITFRRKATDRVMKGLFCLCAFLVVLPLFLILFDLVMKGAK
                     ELRWTLLVDLPRPVGEPGGGIANGILGTVAITLLTMTWSVPVAVMSGIYLAEYGRGKL
                     ASAVRFAVDTLTGVPSIIMGIFAYILIVLPMKRFSAWAGAAALSMIFIPVVVRTTEEM
                     LRTVPTTVREAALALGIARWKATLRITVRTAWPGILTGILLAMSRIVGETAPLLFTAL
                     GNQFWQSHLDQPMAAVPLQVFTYAISPYEDWHDKAWAGALVLITMVLVINIAARVFTR
                     QKR"
     gene            1914..>2178
                     /locus_tag="VK429_05760"
     CDS             1914..>2178
                     /locus_tag="VK429_05760"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91349.1"
                     /translation="MGNVFEIRDMSSWFGDHQVLKKIRMDIEKNSVTSVMGPSGCGKS
                     TFIRCLNRMHDMTPGFRMSGEILLDGTNIYSEKVDPVYLRRRVG"
BASE COUNT          337 a          723 c          695 g          423 t
ORIGIN      
        1 aagggaaaaa ccttgtactg accgtcgtct tccggaaggc gccgatctgt cgtaccattt
       61 ctgttccatg atgagggggg ggagattccc cccttccttt ctccatgaat cgcgaggaat
      121 cgccccggat ggcccgcaaa accggcggaa atatcaagga tctcctcttc gaaagaacca
      181 ctggggggtt cgccttcctg gtgctcttcc ttgcggtcct cctgttcgcc gttctgctgc
      241 gggagtcggt gcccgccctg cggaagttcg gggcctcgtt cctcgtcacc ggaacgtggg
      301 acccggtcct cgagcagttc ggggcgctcc ccttcctcta cggaaccgtg gtctcctcca
      361 ccctcgcctt gctgatcgcc gtccccctga gcgtgggcgc cgcgatcttc atcaacgagt
      421 tcgcgccccc gtggctgaaa gcccccgtct cgctgctggc ggagctcctc gccgccatcc
      481 ccagcgtcat ctacggcctg tgggggatct tcgtcctggt cccgatcctg cgggacgggt
      541 tcatgaagcc ggtgacgaaa accgtcggct ggatcccctt cttcaagggg ccggtgtacg
      601 gcccgagcat gctggcggcg ggagtgctcc ttgcgatcat gatcatcccg ttcatcctgt
      661 cggtcagccg ggaggtgctc gccaccgtcc cgcagcggca gaaggaggcg gtcctctcgc
      721 tgggaggcac ccgatgggag atgatccgga tcgtgatcgg gcaacattgc ctcccgggga
      781 tcttcggcgc cgccatcctc ggcctcgggc gggccctggg ggagacgatg gcggtcacga
      841 tggtcatcgg gaaccggccc gagatcttcg tctccctgtt ccagcagggg tactccatgg
      901 cggcggtgat cgccaacgag ttcgccgagg ccggcggcct ccagctttcg tcgctcatcc
      961 tgatcggcct cctcctgatg ctggtgacgc tcgtcgtgaa tctcgcggcc aaacgaatcc
     1021 tatcgaagat ggtagcgcgc gcctcgcggg ggatctgacg tgaccgggac gatcaccttc
     1081 cgccgcaaag ccacggaccg cgtcatgaag gggctcttct gcctctgcgc gttcctcgtc
     1141 gtcctgccgc tgttcctgat cctcttcgac ctggtgatga agggcgcgaa ggaactccgg
     1201 tggaccctgc tggtcgacct tccccgcccg gtcggggaac ccgggggcgg catcgcgaac
     1261 gggatcctgg gcaccgtcgc catcaccctc ctcacgatga cctggtcggt gccggtggcg
     1321 gtgatgtcgg gcatctacct cgcggagtac ggcaggggga agctcgcctc cgccgtccgg
     1381 ttcgcggtcg acacgctgac gggcgtcccc tccatcatca tggggatctt cgcctacatt
     1441 ctcattgtcc tgccgatgaa gcggttctcc gcctgggccg gcgcggccgc gctctccatg
     1501 atcttcatcc ccgtcgtcgt ccggacgacc gaggagatgc tccggaccgt gccgacgacg
     1561 gtgcgggaag ccgccctggc gctggggatc gcgcggtgga aggcgacgct gcgcatcacg
     1621 gtgcggacgg cgtggccggg catcctgacg gggatcctcc tcgccatgtc gcgcatcgta
     1681 ggggaaacgg cgccccttct gttcaccgcg cttgggaacc agttctggca gtcccacctc
     1741 gaccagccga tggccgcggt gccgctgcag gtcttcacat acgcgatctc gccctacgag
     1801 gactggcacg acaaggcgtg ggcgggggct ctcgttctga tcacgatggt tctcgtcatc
     1861 aacatcgccg cccgggtctt cacccggcag aaacggtagg aggcggaagg cttatgggaa
     1921 acgtattcga aatccgcgac atgagcagct ggttcgggga ccaccaggtg ctgaagaaga
     1981 tccggatgga tatcgagaag aactccgtca cctccgtgat gggcccctcg gggtgcggaa
     2041 agagcacctt catccggtgc ctcaaccgga tgcacgacat gacccccgga ttccgcatgt
     2101 cgggagagat ccttctcgac gggacgaaca tctactccga aaaggtagac ccggtctacc
     2161 tccgccggcg ggtcggga
//
LOCUS       DATGYW010000413         1945 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_411217, whole genome shotgun sequence.
ACCESSION   DATGYW010000413 DATGYW010000000
VERSION     DATGYW010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1945)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1945)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411217"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..477)
                     /locus_tag="VK429_05765"
     CDS             complement(<1..477)
                     /locus_tag="VK429_05765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002624372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HLN91350.1"
                     /translation="MPNATDRSAVFPPEMTADRRRFLALLREKSYERRKVVLSSGRES
                     DFYIDCKQSTLDAEGAVLTGRLFCAMLERGERPEAVGGITLGADPIVTAVSLTSALRG
                     WPVPAFIIRKEPKKHGTEQWIEGTKNLRPGMRVAILEDVVTTGASTMRAIERAVGSG"
     gene            complement(489..1907)
                     /gene="purF"
                     /locus_tag="VK429_05770"
     CDS             complement(489..1907)
                     /gene="purF"
                     /locus_tag="VK429_05770"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015720217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HLN91351.1"
                     /translation="MSDGWHDECGVFGIYGHPEASNMAYLGLYALQHRGQESAGIASS
                     DGEKIIFHKEMGLVADIFSEEILSRLPGHAAIGHVRYSTTGSSELKNAQPLVVDFESG
                     AIAVAHNGNLVNAQELKRELEVSGSIFQSSMDTEVIVHLIARSRKERIEDRIVDALNQ
                     VRGAYSLLFMTRDKLIGVRDPHGIRPLALGKMKGVGGTVITSESCALDLIEAEYLREV
                     EPGEMIVVDDRGTHSHRPFLPAVERFCIFEHVYFARPDSIMGGTCIYEVRKALGRQLA
                     KECPVNADVVIPVPDSGVPAALGFSEASGIPFEMGLIRNHYVGRTFIEPQQSIRHFGV
                     KIKLNAVRGVVSGKRVVVVDDSIVRGTTGRKIIKMIRAAGAKEVHFRISSPPTCYPCF
                     YGIDTPLRRDLIAATHTREETNTYLTSDSLGYLSMEGLHACVPNGNTTYCDACFTGNY
                     SIPLEMEEPGEQLPLFRGSVRV"
BASE COUNT          317 a          668 c          625 g          335 t
ORIGIN      
        1 tcccgacccg acagcgcgct cgatcgcccg catcgtcgaa gcgccggtgg tcaccacgtc
       61 ctccaggatc gccacgcgca tcccagggcg aaggttcttc gtcccctcga tccactgctc
      121 cgtcccgtgt ttcttgggct ccttgcggat gatgaacgcc ggcaccggcc atccccgcag
      181 ggcgctggtc agggagacgg cggtcacgat cggatccgcc ccaagggtga tcccccccac
      241 cgcctccggg cgctcccccc gctcgagcat cgcgcagaag agccgccccg tgaggaccgc
      301 cccctccgcg tcgagcgtac tctgcttgca gtcgatgtag aagtcggatt cccgtcccga
      361 agagaggacg accttgcggc gctcgtagct tttctccctc aggagcgcga ggaaacgccg
      421 ccggtcggcg gtcatctccg gcgggaacac ggcggatcga tcggtcgcgt tgggcatcgt
      481 ttcccccctt agacccggac cgaaccgcgg aacagcggca actgctcacc gggctcttcc
      541 atctcgagcg gaatcgagta gttcccggtg aagcaggcgt cgcagtaggt cgtattcccg
      601 ttcggcacgc aggcgtggag gccctccatg ctgaggtatc caagactgtc ggaggtgaga
      661 taggtgttcg tctcctccct cgtgtgggtc gcagcgatca ggtcccgccg cagcggggtg
      721 tcgatcccgt agaagcacgg gtagcacgtc gggggggagc tgatgcggaa gtggacctct
      781 ttcgccccgg cggcccggat catcttgatg atctttcgcc cggtcgtccc ccggacgatg
      841 gagtcgtcca ccaccacgac ccgtttcccg gagacgactc cgcgcacggc gttcagcttg
      901 atcttcacgc cgaagtgacg gatcgactgc tgcggctcga tgaaggtgcg ccccacgtag
      961 tggttccgga tgaggcccat ctcgaagggg atcccggacg cctcggagaa ccccaacgcc
     1021 gccgggacgc ccgagtcggg cacggggatg acgacatcgg cgttcaccgg gcactccttc
     1081 gccagctgcc gcccgagcgc cttgcggacc tcgtagatgc aggtgccgcc catgatcgag
     1141 tccggacggg cgaagtagac atgttcgaag atgcagaacc gctcgacggc ggggaggaac
     1201 ggccggtggg agtgcgtacc ccggtcgtcg acaacgatca tctcgcccgg ctccacctcc
     1261 cgcaggtact ccgcctcgat caggtcgagc gcgcacgact cggaggtgat gaccgttccc
     1321 cccaccccct tcatcttccc cagggcgagc ggccggatcc cgtggggatc gcgcaccccg
     1381 atcagcttgt cccgcgtcat gaagaggagg gaatacgcgc cccggacctg gttcaacgcg
     1441 tcgacgatgc gatcctcgat ccgctccttc ctggagcggg cgatgagatg gacgatgacc
     1501 tcggtgtcca tcgaggactg gaagatggag ccggagacct cgagctcccg cttgagttcc
     1561 tgggcgttca cgagattgcc gttgtgggcg acggcgatgg cgccggactc gaagtcgacc
     1621 accagcggct gggcgttttt aagctccgag ctgcccgtcg tggagtaccg gacgtgcccg
     1681 atcgccgcgt gccccggaag ccgggaaagg atctcctcgg agaagatgtc ggcgaccagc
     1741 cccatctcct tgtggaagat gatcttttcg ccgtcggagc tcgcgatccc ggcgctctcc
     1801 tggccccggt gctgcagcgc gtagaggccg aggtacgcca tgttggacgc ctcgggatgc
     1861 ccgtagatcc cgaagacgcc gcactcgtcg tgccaaccgt cggacattcg cgatccccta
     1921 tccttccagg cccaaggccg ccgcg
//
LOCUS       DATGYW010000414         2360 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_464846, whole genome shotgun sequence.
ACCESSION   DATGYW010000414 DATGYW010000000
VERSION     DATGYW010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464846"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="VK429_05775"
     CDS             <1..586
                     /locus_tag="VK429_05775"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010877391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HLN91352.1"
                     /translation="PNSPYAASKTSADLLVRAYGKTFGLPVLVTRCSNNYGPYQFPEK
                     LIPFFVTLLHEGKPVPVYGDGMNVRDWIHVEDHSRAVEAVLLRGCPGEIYNVGGGNER
                     TNIEITKLLIAAMGKDERSMKFVADRPGHDRRYAIDDAKIRAELGVVPQIRFEEGLRA
                     TVRWYIDNEPWWRAVQSGEYQSFYDRWYVRKDRA"
     gene            complement(634..1170)
                     /locus_tag="VK429_05780"
     CDS             complement(634..1170)
                     /locus_tag="VK429_05780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91353.1"
                     /translation="MKYIHLNPLRAGIVRSIAELEEYPWTGHGKIVHGGDPKWQDLSL
                     LRAEFHDADGGSRWITAYCDHIQKTSPDDPEKGKKVSPRNPFDTEEGSPAVLSGPRDA
                     FSRTLHCLAASHGVPVEEVAGGSRKYHVVQVRREVLKKCKSELGVSIAQLAHWLGMKE
                     NAAAYLLKSGRMSRKNEE"
     gene            1156..1500
                     /locus_tag="VK429_05785"
     CDS             1156..1500
                     /locus_tag="VK429_05785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91354.1"
                     /translation="MDVLHHIEKIPGFVYGRRLVTILEEVPYAIVPLVEILGISRQQT
                     LHEGSKRTRIALQYQVKMVWHQGPGRASYSPPGQVCADSVEEGIPVDIVEEEFSLLDP
                     SCVNVMDRARKI"
     gene            complement(1690..>2360)
                     /locus_tag="VK429_05790"
     CDS             complement(1690..>2360)
                     /locus_tag="VK429_05790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011957116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLN91355.1"
                     /translation="VGGTVNLLVAARDAGVRRVVFAASSSAYGDTPQLPKRESMSPNP
                     KSPYAAQKLMGEYYMRIFHEIYGLETVSLRYFNVFGPRQDPQSTYAAVIPRFITSVLR
                     GVPPTVYGDGLQTRDFTYIDNVVQANLAACRAPKTACGKVFNIACGERVSLLDILEIV
                     YKLAGKRVPPNFEPGRAGDVRDSLADISLARDLIGYDPKVAFPEGLAETFAWFQSPPE
                     PGRS"
BASE COUNT          465 a          680 c          754 g          461 t
ORIGIN      
        1 gcccaactcc ccctacgccg ccagcaagac gtcggcggac ctgctggtgc gggcgtacgg
       61 gaagacgttc ggcctgccgg tgctcgtcac ccgctgctcg aacaattacg gcccgtacca
      121 gtttcccgag aagctcatcc cgttcttcgt gacgctgctg cacgagggga agccggtgcc
      181 ggtgtacggc gacgggatga acgtgcgcga ctggatccac gtggaggacc attcgcgggc
      241 ggtggaggcg gtgctgctac gcgggtgccc cggggagatc tacaacgtgg gcggggggaa
      301 cgagcggacg aacatcgaaa tcacgaaact gctgatcgcc gcgatgggga aggacgagcg
      361 gtcgatgaag ttcgtcgccg accggccggg tcacgaccgg cggtacgcga tcgacgacgc
      421 gaagatccgg gcggagctgg gcgttgtccc gcagatacgg ttcgaggaag ggctgcgcgc
      481 cacggtgcgc tggtacatcg ataatgaacc gtggtggcga gcggtccagt cgggcgaata
      541 ccagtcgttc tacgaccgct ggtacgtccg caaggaccgc gcctgacccc agaaccggga
      601 cgttcctaga actccaatag aaccgggaca gacttactct tcattttttc gcgacatcct
      661 ccctgacttc agaagatatg ccgcggcatt ttccttcatc ccgagccaat gagccaattg
      721 cgcaatggat accccgagtt cggatttgca tttcttcaat acctctctcc ggacctgtac
      781 gacgtgatat tttctgctgc cgccggcgac ttcttccacc ggtaccccat gggacgctgc
      841 aaggcaatgg agagtccggg agaacgcatc gcgggggccg gagagaaccg ctggtgaacc
      901 ctcttccgtg tcaaacggat tccgaggaga tacttttttc cccttctccg ggtcatcggg
      961 ggatgttttt tgaatgtgat cgcagtaagc ggttatccaa cgggacccac catcggcgtc
     1021 atgaaattcg gcccgtagca agctcaaatc ctgccatttc gggtcgcctc cgtggacgat
     1081 tttcccgtga ccggtccacg gatactcctc cagttcggcg atcgaccgta cgattcccgc
     1141 acgcaggggg ttgagatgga tgtacttcac cacatcgaga aaatacctgg ctttgtctac
     1201 ggtcggcgac ttgtaacgat tctggaagag gtgccctacg cgattgtgcc gctcgttgaa
     1261 atacttggaa tatcccgtca acagacattg catgaaggaa gcaagcgaac ccgtatcgct
     1321 ttgcaatatc aggtgaaaat ggtttggcat cagggaccag gcagggcatc ttattcccca
     1381 cctgggcagg tttgcgccga ctcggtggag gaaggaatcc ctgtcgatat cgtcgaagaa
     1441 gagttctcgc ttctcgatcc ctcttgcgta aacgtgatgg atcgcgcccg gaaaatctaa
     1501 ccttggccct cttggcatac ccggaataag gtcaaatatc gggccaagtg caacggaagt
     1561 cgacaagggg ggacgcgcca cgggcgcaag agcggaacgg atcgtttcct tattccatat
     1621 tccagaacaa aaggagtctt ggctattggg caaccggtgc ggtaagcctg tccctcttct
     1681 ggggcagttc taggaacgtc ccggttctgg gggcgattgg aaccaggcga acgtttccgc
     1741 aaggccttcc ggaaacgcca ccttcgggtc gtagccgatg aggtcccggg cgagggagat
     1801 gtcggccagc gagtcgcgca cgtcccccgc gcgtcccggt tcgaagttcg gcggtacgcg
     1861 cttccccgcc agcttgtaga cgatctcgag gatgtcgaga agcgacaccc gttccccgca
     1921 ggcgatgttg aagacttttc cacacgcggt cttcggggcg cggcaggcgg ctaggttggc
     1981 ctggaccacg ttgtcgatgt aggtgaagtc gcgcgtctgg aggccgtcgc cgtagacggt
     2041 aggggggacc ccccgaagca ccgaggtgat gaaccggggg atgaccgcgg cgtacgtcga
     2101 ttgcgggtcc tgccgcgggc cgaacacgtt gaagtaccgc agggagacgg tctcgagccc
     2161 gtagatctcg tggaagatgc gcatgtaata ttcccccatc agcttctgcg ccgcataggg
     2221 ggacttcggg ttggggctca tcgattcccg cttggggagc tggggggtgt cgccgtaggc
     2281 ggaggaggag gcggcgaaga ccacgcgccg gacgccggcg tcgcgcgcgg cgacgagcag
     2341 gttgaccgtc ccccccacat
//
LOCUS       DATGYW010000415         2203 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_131441, whole genome shotgun sequence.
ACCESSION   DATGYW010000415 DATGYW010000000
VERSION     DATGYW010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_131441"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..983
                     /locus_tag="VK429_05795"
     CDS             <1..983
                     /locus_tag="VK429_05795"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLN91356.1"
                     /translation="KSDVSAENYRAGTFDRWGIGYRQFKDLNPRMVYQWMGGFGGWGP
                     GRNRASYDILGQAQGGCFSITGWPKEYGGMPSKQTIWIMDYWGGAISAFNIIACLYWR
                     DNVSGEGQFLEYSQVHGAQRHLTDSISLYGKTGIVAQRWGNWDPLLSVHGILKCGKSS
                     YPNSKNPQEQEVGFCFVSAFKDEDFKKLCGVVGNAELAKKYPTHSDRVGSDAQQAIYP
                     ALEKFAADKTKEEVWKAFTGAGLVSQPVWNSNEAANQEHWHLRGSMQWLDDPTFGDVL
                     TQGVAYRLSDTPGRIKHVFKPVGADNEFVLSKLCGYGGSEIADLEKKEII"
     gene            999..1397
                     /locus_tag="VK429_05800"
     CDS             999..1397
                     /locus_tag="VK429_05800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91357.1"
                     /translation="MMSSPFRETSLILECPKCETLNYLDPFTFWNFKGKIKCAGCDAI
                     WAYELVNGTRKAAPAAATGPHDKMPGYAQSKDWKTITDFSKVNKGPQAREDFQGKPIP
                     ISKSKRGNPVSGTPLTAADLVGSRPKQFAK"
     gene            1446..1634
                     /locus_tag="VK429_05805"
     CDS             1446..1634
                     /locus_tag="VK429_05805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91358.1"
                     /translation="MATIPNCAKCNNFVPATDPNISKVYMGQCTKLEWPYAQNIPKVD
                     GIEGECGYYEGSGPATLK"
     gene            1792..2166
                     /locus_tag="VK429_05810"
     CDS             1792..2166
                     /locus_tag="VK429_05810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91359.1"
                     /translation="MKVEFYYDSTVAPGSVFPCDNAKAVELIGQLAAKGVNAKAVDLK
                     GQQVAFMTYNAAVTGPKSQVRAVFGAKGALQEDFGKTVPALLLFEKDEDRYPNEAFPR
                     SDRELMKLLGCEDMLQALLAKA"
BASE COUNT          470 a          672 c          717 g          344 t
ORIGIN      
        1 ccaagtccga cgtgtccgcc gagaactacc gggcggggac gttcgaccgg tgggggatcg
       61 ggtaccggca gttcaaggac ctcaaccccc ggatggtcta ccagtggatg ggcggcttcg
      121 gcggctgggg cccgggacga aaccgtgcct cgtacgacat cctcggccag gcgcagggcg
      181 gctgcttctc catcaccggg tggccgaaag agtacggcgg gatgccgtcc aagcagacga
      241 tctggatcat ggactattgg ggcggcgcga tctccgcgtt caacatcatc gcctgcctct
      301 actggcgcga caacgtttcc ggagagggtc agttcctgga gtactcccag gtgcacggtg
      361 cccaacggca cctgaccgac tccatctccc tctacggcaa gaccggcatc gtggcgcagc
      421 ggtgggggaa ctgggacccg ctgttgtccg tccacgggat cctgaagtgc gggaagtctt
      481 cctatccgaa ctcgaagaac ccgcaggaac aggaagtcgg cttctgcttc gtctccgcgt
      541 tcaaggacga ggacttcaag aagctgtgcg gcgtcgtcgg aaacgccgag ctcgccaaga
      601 agtacccgac ccactcggac cgcgtggggt cggatgccca gcaggcgatc taccccgcgc
      661 tggagaagtt cgccgccgac aagaccaagg aagaggtctg gaaggcgttc acgggcgccg
      721 gcctggtctc ccagccggtg tggaactcca acgaggcggc caatcaggag cactggcacc
      781 tccggggctc gatgcagtgg ctcgacgacc cgaccttcgg ggacgtcctc acccagggcg
      841 tcgcgtaccg gctgtccgat acgccgggcc gcatcaagca cgtcttcaag ccggtcggcg
      901 cggacaacga gttcgtcctc tccaagctgt gcggctacgg cggctccgag atcgccgatc
      961 tggaaaagaa agagatcatc taacaagaaa aggaggtaat gatgagcagt cctttccgcg
     1021 agacgtcgct catactggaa tgcccgaagt gcgagacgct gaactacctt gatcccttca
     1081 ccttctggaa cttcaagggg aagatcaagt gcgccggctg cgatgccatc tgggcatacg
     1141 agctggtgaa cgggacccgg aaagccgcgc cggccgccgc cacggggccg cacgacaaga
     1201 tgcccggata cgcccagagc aaggactgga agacgatcac cgacttttcg aaggtcaaca
     1261 agggaccgca ggcgcgggag gacttccagg ggaagccgat cccgatcagc aagagcaagc
     1321 gcggcaaccc ggtgtcgggc accccgttga cggcggcaga cctcgtcggg agccgcccga
     1381 agcagttcgc gaagtaacgg tcggttcgcg gcgaaagaac caggaatcta caaaggagga
     1441 gaacagtggc aactattccg aattgtgcga agtgcaataa cttcgtgccc gcgaccgacc
     1501 cgaatatctc caaggtctac atggggcagt gcacgaagct cgaatggccg tacgcccaga
     1561 acatcccgaa ggtcgatggg atcgaggggg agtgcggata ctacgagggg tccggacccg
     1621 cgaccctgaa gtagaaaaaa ggtccttgaa ccgaccgtcg ccggtctggt agattagcga
     1681 cgcggcaaat ccacggccgc cctgtggtta tcacaagcgc ggccgtggat tttgcctttc
     1741 aggggctgag aggtcatcct caatacactc aacgaaggag ggttcacagc gatgaaggtg
     1801 gaattctact acgacagtac ggtggcgccc gggtcggttt tcccctgcga caacgcgaag
     1861 gccgtcgagc tgatcggcca gctggcggcc aagggcgtca acgccaaggc cgtcgacctc
     1921 aagggccagc aggtcgcgtt catgacatac aacgcggccg tgacgggtcc caagtcccag
     1981 gtccgcgccg tgttcggcgc gaagggcgcc ctgcaggaag acttcgggaa gactgtcccg
     2041 gccctcctcc tgttcgagaa ggacgaggat cgctatccga acgaggcgtt tccccgcagc
     2101 gacagggagc tgatgaagct gctcggctgc gaggatatgc tccaggcgct cctggcgaag
     2161 gcgtgacacc gcgtacccac ccgaggaccg ccgggccgga aac
//
LOCUS       DATGYW010000416         4424 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_81313, whole genome shotgun sequence.
ACCESSION   DATGYW010000416 DATGYW010000000
VERSION     DATGYW010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4424
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81313"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..276)
                     /locus_tag="VK429_05815"
     CDS             complement(127..276)
                     /locus_tag="VK429_05815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HLN91360.1"
                     /translation="MLWTIAVILLVLWALGLVTSYTMGGFIHLLLVIAIVVVLINVIQ
                     GRKPL"
     gene            571..1170
                     /locus_tag="VK429_05820"
     CDS             571..1170
                     /locus_tag="VK429_05820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019660264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HLN91361.1"
                     /translation="MSMIRSFVLADFITLANAGFGMAGIFLCLNRVTDSRATHFWAVF
                     LLLPLALVCDVLDGFVAHRLKRQSLLGADLDSLSDIVSFGVAPAVLGFALGLQGMWDS
                     LILIYFVCCGISRLARFNVTAEALSGGTGKVKYYEGTPIPASIIIVIILGIAFWQGRV
                     DHLLPFGSVRIGPWIVHPFTLLYAASGSAMISTIRIPKP"
     gene            1304..>4424
                     /locus_tag="VK429_05825"
     CDS             1304..>4424
                     /locus_tag="VK429_05825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91362.1"
                     /translation="MTLRRTALWCGAGLAALLGIAALAMALAVYRPQLLRPWVQRALT
                     PRGGTASLAGLRLSLAPPVLELSGLAIAGPPHEGDLLRLDLLRFELIPGRLFHDGPWL
                     RHVEARGLVFERPRPHEAKGPPDLTPLTRLFDIEDLSLTDARLRVALPQGDLAADGVR
                     LSLIPGEGGVRRFSGTGELTFGREGSTIAQGKLSARGNVTPGPAIEADLELASARVLL
                     PWLAGDVVGQTRVRVTTTSFHADALTLTLPQVRVRLGPQASRNLGPIRLNAMASATLE
                     GKEPRLEVRGFDIEGLLLAQGRLGGPTLEEMSGTLEGEIPRVEQVKTVLAPLLPRSLT
                     GMDLRGRLPYRLRLSTRGTIRVLALELLPRDLLFSWPTAGFGCHVGGSLRAEGSFQDW
                     LHGKASLLGRIQGTGHLERPPLAVRRFRFDAPLAGRIAAPTLPGCTLSVGAGEMTYEV
                     RPLPLGTLGLRGSVRRIDTSWRVEDVGIQSASLGPLTGALAFHGGSLSGRLDGASLPA
                     DNLVALARALSGREWDGWSPAGVIGLAARLEPAVGGSRIGATATLGQIGFTSPAGDVI
                     GQNLAGRVDLEALLIPQPRMKTDLVLHRGEALWGTVYVDFAKDPLDLHVGGARGGAEE
                     YKDLLLEGGLAGFGRMNIEGKARLAGGRWRHQGHLAVRDARLGPIFRTFLRDPLAASR
                     RDLAGLEMGGAAEVDLSFSGSGQAADLSGTLRLRSGDLRGGAEQPLLSGLDLDLPIAY
                     SLGAANPGLPKPSDPARWGRLRLKQLRLAGQELGPLEMPAVLVPNHLYLGGAIDTSLF
                     GAKLSLRQIRVAEPLSPRFRINMAAQLDGLDLARVAGENSMLEGHLGGLLDPVSIGRE
                     RISATGELNGDLFGGRLDIRNVTAERPFSAGREIGADVNVRLIDLERLSAALGVGRIT
                     GLLSGSIEGLRVAYGQPVAFHLKMESVPTKGVSQSVSLKAVNSISLVSTGSALSGLGV
                     SIMTKFFREFPYEKIGFECRLKNDVFTVRGLIHEDGVEYLVKRRLFTGIDVINGNPDN
                     RIGFSDMVER"
BASE COUNT          749 a         1388 c         1398 g          889 t
ORIGIN      
        1 acgatgcaga ccaggaaact caacacgcgg tgtcttttta ccatgacgct ctctcctctc
       61 gtccagggtt gggaccttat ttcttcatgg gcacaagaag cagcgccgcg ccggccgcga
      121 tcgccgctac agtggttttc gtccctgaat gacgttgatc agcaccacca cgatcgcgat
      181 gaccaggaga aggtgaatga atccgcccat cgtgtacgaa gtgaccaacc ccagcgccca
      241 gaggacaagc aatatgacgg ctatggtcca tagcatgttt cgtcacctcc tcccgtacac
      301 cagcgaagtt cattgcaaga tatgcattcc ggctacttcc ccaatacctt ctttccctgg
      361 ccgatctttc cctgaacttt gccggtgatc ttgtttcacg ataatcccgc ccaccaacct
      421 tcggtatcgg cttttgtccg aaccgcgaat cgttgtttgt cctatttttc ggccggtgtt
      481 tgtcctatgg caggaccctt gaattcgttg gagactccgg aaggatactt gcactaagat
      541 aagcgtgtga aggacccatc gaaaaaatcg atgtccatga tcagatcctt tgtcctggcg
      601 gactttatca ccttggcaaa cgcaggcttc ggaatggccg gtatctttct gtgcctgaat
      661 cgtgttaccg attcccgcgc cactcacttc tgggctgtct ttctcctcct ccctctcgcg
      721 cttgtgtgtg acgtcctcga tgggttcgtg gctcaccgtc tgaagcggca atcgcttctt
      781 ggggccgatc tcgattcact gtccgacatt gtttccttcg gcgtagcacc cgccgtcctg
      841 gggtttgcat tgggactgca aggcatgtgg gattcgctga tcttgatcta tttcgtctgt
      901 tgcggaatca gccgacttgc aaggttcaat gtgaccgcgg aggcgctttc aggcggaaca
      961 ggaaaggtga aatattacga agggactccc atccctgcca gcatcatcat tgtgatcatt
     1021 cttggcatcg cattctggca gggcagggtc gatcatctcc tcccctttgg atccgttcgg
     1081 atagggccat ggatcgttca cccttttaca ctcctgtatg cggcgagcgg aagtgcgatg
     1141 atcagcacca tccgcatccc gaaaccttga gaaaatcaaa acaccgacct tccccctgaa
     1201 ggatgaccct ctgcttatat aagcgcatac ttcagaagcg gcaacccggt actgtacaag
     1261 tcattccttc cgaaagtgca cggcaattcc ggtggggtgt tcggtgacgc tgagacgcac
     1321 ggccctctgg tgtggcgcgg gattggcggc ccttctgggg atcgccgcac tggccatggc
     1381 attggccgtc taccggcccc aactgctccg cccatgggtg caacgggcac ttaccccgcg
     1441 gggcggaacg gcttccctgg ccggcctgag actatcgctt gccccaccgg tccttgaact
     1501 ttcggggctc gcgatcgcgg gtcctccgca cgagggcgac ctcctgcgcc tggacctcct
     1561 gcgattcgaa ctgatccctg gtcgtctctt ccatgacggt ccgtggttgc ggcacgtgga
     1621 agccagagga ctcgttttcg agcgcccgcg gccccatgag gcaaaggggc cacccgacct
     1681 gacaccgctc acccggttgt tcgacatcga ggacttgtcg ctgacggacg cccggctgcg
     1741 cgtggccctg ccccaaggcg atctcgccgc cgacggggtc cgtttgagcc tgatcccggg
     1801 ggaagggggc gttcgccgct tcagcggcac cggggagctg accttcggcc gggagggaag
     1861 caccatcgcc cagggaaagc tttccgcccg cggaaatgtc acgcccggcc ccgcgatcga
     1921 ggccgacctg gagttggcgt cggcccgcgt acttctgccg tggctcgccg gcgacgttgt
     1981 cggccagacc agggtgcggg tgaccacgac aagtttccat gccgatgcgt tgaccctgac
     2041 cttgccgcag gtgcgagtgc gcctgggtcc tcaagcaagc aggaacctcg ggccgatccg
     2101 cctgaacgca atggcgagcg caacgctgga gggaaaggaa cctcgcctgg aggtgcgcgg
     2161 gttcgacatc gaaggcctgc tcctggcgca ggggcggctg gggggaccca ccctggaaga
     2221 gatgtccgga accctggagg gggagatccc ccgggtcgaa caggtgaaaa ccgtcctggc
     2281 tcccctcttg ccccgcagcc tgacgggcat ggatctcagg ggaaggctcc cctaccgcct
     2341 ccgcctctcc acccgaggga cgatccgcgt gctggccctg gaactcctcc cccgggatct
     2401 gctgttttcc tggccgaccg cagggtttgg ttgccatgtc gggggatcct tgcgggcgga
     2461 gggatcgttt caggattggc ttcacggcaa ggccagcctg ctcgggcgga tccaggggac
     2521 cgggcatctc gagaggccgc ctcttgcggt acgccggttt cgcttcgacg cgccattggc
     2581 cggcagaatc gccgctccca cgttgccggg ctgtacgctt tcggtcgggg cgggcgagat
     2641 gacctacgaa gtccgtcccc ttcccttggg gacgttggga ctccggggct ccgtcaggcg
     2701 gatcgatact tcctggcgcg tggaagacgt gggcatccaa tccgcttccc tgggtccctt
     2761 gacgggtgcg cttgccttcc acggagggag cctcagcggc cgcctggatg gggcgagtct
     2821 gcccgcggac aacctggtgg ccctcgcgcg ggcactcagt ggacgggagt gggacggctg
     2881 gtcgcctgca ggggtaatcg gcctcgccgc ccggctcgaa cccgcggtgg gcggctcccg
     2941 gatcggggct accgccacgc ttggacaaat cggcttcacc tcgcccgccg gcgatgtgat
     3001 tgggcagaac ctggccggca gagtcgacct cgaggcgctg ctgatcccac aaccgcgaat
     3061 gaaaaccgac ctggtcctgc accgggggga ggccctctgg ggcacggtgt acgtcgactt
     3121 cgccaaggac cctctggacc tccacgtggg gggggcgcgg ggaggagccg aagagtacaa
     3181 ggaccttctt ctggaaggcg gtttggcggg gttcggtcgc atgaacatcg aggggaaggc
     3241 gcgccttgcc ggaggaagat ggcgccacca ggggcacctc gcagtacgcg atgcgcggct
     3301 cggcccgatc ttccggacgt tcctgaggga tccgctggcc gcatcgcgtc gcgacctggc
     3361 ggggctggaa atgggcggtg ccgccgaggt cgacctttcc ttctcgggct cggggcaagc
     3421 ggccgacctg agcgggacgc tccgtctgcg ctcgggcgat ctccgtgggg gagcggagca
     3481 gccgcttctc tcggggctcg acctcgacct tccgatcgcc tactccctgg gagccgcgaa
     3541 cccaggcctc cccaaaccgt ccgatccggc aaggtggggc cggttgcgcc tgaagcaact
     3601 tcgtctggcc ggacaggaac tggggccttt ggagatgccg gcagtccttg tgcccaacca
     3661 cctctacctc gggggagcga tcgatacgtc cctgttcgga gccaaactgt ccctgcggca
     3721 aatccgggtg gccgaaccgc tttccccgcg cttccgcatc aacatggcgg cacagctgga
     3781 cggtctcgac ctcgcccggg tcgccgggga gaactccatg ttggagggac acctgggagg
     3841 cctcctcgat cccgtttcca tcggccggga acgaatttcc gccacgggag aactgaatgg
     3901 ggatctgttc ggcggccggt tggacatccg caacgtgacg gcggaacggc ccttcagcgc
     3961 gggacgggaa atcggcgccg acgtgaacgt acgcctgatc gacctggaac ggttatccgc
     4021 agccttgggc gtcgggcgca tcaccgggct tctttccggt tctatagagg gtttgcgggt
     4081 tgcttacggc cagccggtcg cgtttcatct caagatggag tcggtaccca cgaaaggggt
     4141 cagccagtcc gtgagcctca aggcggtgaa ctccatctcc ctggtgagta cgggctccgc
     4201 attgagcggc ctgggggtct ccatcatgac gaaatttttc cgggaattcc cctacgagaa
     4261 gatcggtttc gaatgccgcc tgaaaaacga cgtcttcacc gttcgggggc tcatccacga
     4321 ggatggtgta gagtatctgg tgaagcggcg cttgttcacc gggatcgacg tgatcaacgg
     4381 gaacccggac aaccgcatcg gcttttcgga catggtggag cggg
//
LOCUS       DATGYW010000417         5136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_184622, whole genome shotgun sequence.
ACCESSION   DATGYW010000417 DATGYW010000000
VERSION     DATGYW010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 5136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5136)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5136
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184622"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            100..912
                     /gene="cpaB"
                     /locus_tag="VK429_05830"
     CDS             100..912
                     /gene="cpaB"
                     /locus_tag="VK429_05830"
                     /inference="COORDINATES: protein motif:HMM:TIGR03177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly protein CpaB"
                     /protein_id="HLN91363.1"
                     /translation="MFASMKRRARSFSSGKWAGKVRTLLPLLAGLLLCGFALAAAGRR
                     VATVEKEILRQANPVEVVVASVPIPAGETFGVQNLAKKAVPSSGTGQRNVPASEFELL
                     VGARAKTAIEPGEPVLWTDVEEPYDTDAFSRTVLPGRRAMTIGVDTTSSFAGMLQPGD
                     RVDLLVERSGATPADWVRDIPVIAVDRDHNRHAHPSEKEETATVTLMVTPGEGGRIAR
                     ASGKTHWFLRNPGDNAAPTPRPPAIPVTSHPVEVWKGGLKVSPTLAAQEIRE"
     gene            909..2108
                     /locus_tag="VK429_05835"
     CDS             909..2108
                     /locus_tag="VK429_05835"
                     /inference="COORDINATES: protein motif:HMM:NF012485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HLN91364.1"
                     /translation="MRRLLPRAVAAIALFLAAAPGTASPATETIRIRPGFQQILDRPG
                     VSRLSVGNPEILEAQPLPRDGGILVVGKKEGETDLVLWEKSARTVWHVEVGSDKRSIA
                     EDARGFAGAFPGLTVFEAGGSVILSGPVTTSQDKTVLEAYARAHPGVHLRLSLPEEKK
                     NLLLYDLKIIEISRGETAQLGIRWPDALSAQGTFVVGTGNEGTFTVGTDFEARLNLLM
                     ANGKARILSNPRLACESGGEAQFLAGGEIPIVIITPETRTVEWKTYGIILKIHPTMAE
                     GGKIRTQVNAEVSAVDHGSGTSDVPGFLTRRVSSLFSTPPGETVMLSGLVKSEMAKDI
                     AKVPLLGQIPVIGELFKSRSFRENRTELAIFITPVVVSADAAPEAADWERKAEKEKER
                     LRFRLLD"
     gene            2155..3378
                     /locus_tag="VK429_05840"
     CDS             2155..3378
                     /locus_tag="VK429_05840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007633018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CpaF family protein"
                     /protein_id="HLN91365.1"
                     /translation="MNGDIRRTLHLTVLSRLDARKTGLPFSEDVASWRDRAEECLQVE
                     MRGLSLGDAERAALRREILDEIFAFGPITPLLSDPAVSEIMVNGFESIYVERGGLVTR
                     HAGSFLSEESLRATIDRMVSKVNRRLDESSPYVDARLPDGSRINAIIPPVCLTGACLT
                     VRKFRKEAFSLEELVLIGSVSQDAAEYLRGAVQERRNIIVSGGTGSGKTTLLNALSQF
                     IPEEERIVTIEDAAEIRLQKPHVICLEARPVNIEGSGAVTIRDLVRNSLRMRPDRIIV
                     GECRGGEALDMLQAMNTGHDGSITTGHANTPRDMLRRLETMVLLSGVEIPIGAIREQI
                     ASAIDVIVHTGRIASGKRAVTSVTEITGMNESQILLQELFRWSKGSARKDGAGRLVAT
                     GIPSRFRRGGGDTWD"
     gene            3369..4220
                     /locus_tag="VK429_05845"
     CDS             3369..4220
                     /locus_tag="VK429_05845"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HLN91366.1"
                     /translation="MGLTFTEAGIFILGAALIAWYFLHAALPQARTRFVTAANRHSDE
                     LREEFVLLPPARIAAVLLGSATVFAGATLAATRSIAVASASGAAPVLFAGLLVRWYRN
                     RRKRSILSQLPSLLDLLSGHMRAGHSLSESLAETVPLLPAGIREEMAWVLQQHRLGTP
                     LTQALARWEERIRSEETSLLVRPLSAAISGGGNVVDLLERTRDILRFRMRMTERLRSM
                     TAQARLQALVLTLLPPAFAVALSKVDPDFLPNLLGTPQGKTIMAIAFVLQVLGWITIR
                     RILSVRP"
     gene            4217..5035
                     /locus_tag="VK429_05850"
     CDS             4217..5035
                     /locus_tag="VK429_05850"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HLN91367.1"
                     /translation="MRARDFFLIGAPMLLGGAFLAAFLLRTWKGRSIAHVLQAYRSCH
                     DRFTEGLVAKRFLRFPGACLVSSLRPWALAELFALLVFLAVVSCNRSASGVAQATVLA
                     ALVGSLVAWVSFRGAARETLRSVQRDLQSACFLFSLLIESGMGASSALQETSGSIPEG
                     ALARELGELVRSRSLGVPRGESIERSRRRVPLEEYRLFLNHVLQGERLGIGLSRSLRE
                     LSAKMLESQGHRAETIAQQAAVKMLFPLVVFIFPAVFLIILSPVILGLWDRFAR"
BASE COUNT          844 a         1686 c         1719 g          887 t
ORIGIN      
        1 gttcccgtct ccactcctcc ggctgggaat ccctggccac cgggaagggc cctggaggga
       61 tacacgtgct gcaaatcacc caggataagg agatcaccct tgtttgcctc gatgaagcgg
      121 agggcacgtt ccttctcttc cgggaagtgg gccggtaagg tccggacgct cctcccactg
      181 cttgcgggtc ttctcctgtg cggcttcgcc ctggccgccg ccggacgcag ggtggcgacc
      241 gtggaaaagg agatcctccg gcaggcgaac ccggtggagg tggtcgtcgc ctcggtgccg
      301 attcccgccg gggagacgtt cggcgtgcaa aacctcgcga aaaaagcagt cccctcctcc
      361 gggacggggc agcgcaacgt gcccgcctcc gagttcgaac ttctggtggg ggcgcgcgcc
      421 aagacggcga tcgaacccgg agagccggta ttgtggaccg acgtcgagga accgtacgac
      481 acggacgcct tctccaggac cgtccttccc ggccggaggg cgatgacgat cggggtggac
      541 acgacatcgt cgttcgccgg catgctgcaa ccgggagacc gggtggacct gctcgtggag
      601 cgttccgggg cgactcccgc cgactgggtt cgggacatcc ccgtgatcgc ggtggaccgg
      661 gatcacaatc gccacgcgca cccttctgaa aaagaggaga ccgccaccgt gaccctgatg
      721 gtcacgccgg gcgaaggggg ccggatcgca cgggcctccg ggaaaacgca ctggttcctt
      781 cgcaatcccg gcgacaacgc ggcccccaca ccacgccctc cggcaatccc cgtgacgtcg
      841 catccggtag aggtctggaa aggcggcctg aaggtttctc cgaccctcgc cgcacaggag
      901 atccgcgaat gaggcgcctt cttccgcgcg ccgtcgccgc cattgcgctc ttccttgccg
      961 cggcgccggg gaccgcatcc ccggccacgg agacgatccg gatccgcccg gggttccagc
     1021 agatcctgga tcggccgggc gtctcgcgcc tttccgtcgg aaaccccgag atcctcgagg
     1081 cccagccgct tccccgcgac gggggaatcc tcgtggtcgg gaaaaaggag ggggagaccg
     1141 accttgtcct gtgggaaaag agtgcgcgga cggtgtggca cgtcgaggtg ggatcggaca
     1201 agaggtcgat cgccgaggat gccagggggt tcgcgggggc ctttccgggt ttgaccgtct
     1261 tcgaggcggg cggctcggtg atcctgagcg gtcccgtgac gacgtcgcag gacaaaaccg
     1321 tgctcgaggc gtatgcccgc gcccaccccg gggttcacct ccggctctcc ctgcccgagg
     1381 agaagaaaaa ccttcttctc tacgacctga agatcatcga gatcagccgg ggggagacgg
     1441 cgcagctggg gatccgctgg ccggacgccc tgtcggcaca gggaacattc gtcgttggaa
     1501 cgggaaacga ggggacgttt accgtcggca cggacttcga ggcgcgactg aacctcctta
     1561 tggcgaacgg aaaggcgagg atcctctcca atccacgcct ggcgtgcgaa agcggcgggg
     1621 aagcgcagtt tctcgcgggg ggggaaatcc ccatcgtgat catcacgccg gaaacccgga
     1681 ccgtggagtg gaagacgtac ggcatcattc ttaagatcca ccccacgatg gcggaagggg
     1741 gaaagatccg aacgcaggta aacgcggagg taagcgcggt ggaccacgga agcggaacgt
     1801 ccgacgtccc gggatttctc acccgacggg tatccagcct cttctccacg ccgccgggag
     1861 aaacggtgat gctgtcgggc ctggtgaaga gcgagatggc gaaggacatc gccaaggtcc
     1921 cgctgctggg gcagatcccc gtgatcgggg agctgttcaa gtcgcgcagc ttccgtgaga
     1981 accggacgga gctcgcgatc ttcatcaccc cggtcgtggt gtcagcggac gccgcccccg
     2041 aagccgccga ctgggagcgg aaagcggaga aagagaagga gcgcctccgc ttccgtctgc
     2101 tggactgacg caccgttgag caccgaagca ccacacccat caggaggtat ccgcatgaac
     2161 ggtgatatcc ggcgcacgct gcacctgacg gtgctgtcgc ggctcgacgc acggaagacg
     2221 ggcctgccgt tctcggagga tgttgccagc tggagggacc gcgccgagga gtgcctgcag
     2281 gtggagatgc gcggactgtc gctgggggat gcggaacggg ccgccttgcg gcgcgagatc
     2341 ctcgacgaga tcttcgcttt cgggccgatc actcccctgc tctccgatcc cgccgtctcc
     2401 gagatcatgg tgaacggatt cgagtcgatc tacgtggagc ggggcgggtt ggttacccgc
     2461 cacgcaggct cgttcctctc ggaggaatcg ctccgcgcga cgatcgaccg gatggtgtcc
     2521 aaggtcaacc ggcgcctcga cgaatcctcc ccctacgtcg acgcccggct cccggacggg
     2581 tcacgcatca acgcgatcat accgccggtt tgcctcaccg gggcgtgcct gacggtccga
     2641 aaattccgga aggaggcgtt ctccctcgag gaactcgtcc tcatcgggtc ggtgtcccag
     2701 gatgccgcgg agtacctgag aggagccgtg caggagcggc gaaacatcat cgtctccggt
     2761 ggaaccggtt ccggaaagac caccctcctc aacgccctgt cccagttcat ccccgaggag
     2821 gagcggatcg tcacgatcga ggatgcggcg gagatccggc ttcagaaacc ccatgtgatt
     2881 tgcctcgagg caaggccggt caacatcgaa gggtctggag ccgtcactat ccgggatctc
     2941 gtccgcaact ccctccgcat gcgcccggac cggatcatcg tcggggagtg ccgcgggggc
     3001 gaggcgctcg acatgctgca ggcgatgaac acgggccatg acggctcgat caccacggga
     3061 cacgcgaaca ccccccggga catgctccgc cgcctggaga cgatggtcct gctcagcggg
     3121 gtggagatcc cgatcggcgc gatccgggag cagatcgcct ccgccatcga cgtcattgtc
     3181 cacaccgggc gaatcgcctc cgggaaaagg gcggtcacgt cggtcaccga aatcaccggc
     3241 atgaacgaat cgcagatcct tttgcaggag ctgttccggt ggtcgaaggg aagcgcgcgg
     3301 aaggacggtg cggggcgcct cgtcgcaacg gggatacctt cccggttccg ccgcggggga
     3361 ggcgacacgt gggactgaca ttcacggaag ccgggatctt catccttggc gccgcgctga
     3421 tcgcctggta tttcctccat gcagcgctgc ctcaggcgcg cacgaggttc gtcactgcgg
     3481 cgaatcgtca ctccgacgaa ttgcgcgagg agttcgtcct ccttccgccg gcgcggatcg
     3541 ccgcggttct gctcggttcc gccaccgtgt tcgccggggc gacgcttgcg gcgacccgct
     3601 ccatcgccgt cgcgtccgca tccggagccg cgccggttct cttcgccggc cttctggtcc
     3661 ggtggtaccg caaccggcga aaacggtcga tcctctccca gttgccgtcg ctcctcgacc
     3721 ttctgtccgg gcacatgagg gcggggcaca gcctgtccga gtccctcgcg gagaccgtcc
     3781 ccctgttgcc cgccggaatc cgggaagaga tggcgtgggt cctgcagcag caccgcctgg
     3841 gcacgccgct gacgcaggcc ctggcccggt gggaggaacg gatccgatcg gaagagacct
     3901 ccctcctggt gcgtcctctg agtgcggcga tctccggagg ggggaacgtc gtggacttgc
     3961 tggagcgcac ccgggacatc ctccggttcc ggatgcggat gacggagagg cttcgaagca
     4021 tgacggcgca ggcccggctg caggccctgg tcctcacgct gctccctccg gcgttcgcgg
     4081 tcgccctttc gaaggtcgat cccgatttcc tcccgaatct cctcggcact ccgcagggga
     4141 aaacgatcat ggcgatcgcg ttcgtactcc aggtccttgg gtggatcacc atacgaagga
     4201 tcctgtcggt gcggccatga gggcaaggga ctttttcctc atcggcgcgc cgatgctcct
     4261 cggtggcgcg tttctcgccg cgttccttct gcgcacgtgg aaggggcgtt ccatcgcgca
     4321 cgtccttcaa gcgtaccggt cctgccacga ccggttcacg gagggactcg tcgcgaaacg
     4381 gttccttcgg ttccccgggg cctgcctcgt ctcctccctc cggccctggg cgctcgcgga
     4441 gctcttcgcg cttctcgtct tcctcgccgt cgtttcgtgc aaccgctccg cgtcaggggt
     4501 ggcgcaagcg acggtcctcg ccgcgctggt cggctccctc gtcgcctggg tctcctttcg
     4561 cggtgccgcg cgggaaacgc tgcgctcggt gcagcgcgat ctccagtcgg cgtgcttcct
     4621 cttctccctc ctgatcgaat cgggaatggg cgcctcttcg gcgcttcagg aaacgtcggg
     4681 ctcgatcccg gagggcgcgc tcgcgcggga actgggagaa ctggtccggt cccgatcgct
     4741 cggcgttccc cgtggggaat caatcgaacg atcgcggcgg cgtgtgccgc tcgaggagta
     4801 caggctgttc ctcaaccatg tcctccaggg ggagcgcctc gggatcggac tgtcacggag
     4861 cctgcgggaa ctctccgcga agatgctgga aagccagggg caccgtgcgg agacgatcgc
     4921 ccagcaggcg gcggtgaaga tgttgttccc cctggtcgtt ttcatctttc ccgccgtgtt
     4981 tctcatcatc ctgtccccgg tgatcctcgg cctgtgggac aggttcgcga ggtaaaccgc
     5041 atggggccca gggttcgaat acggacatgg ggagcgctgg tcgtcgtgtt cctccttctg
     5101 tgcacgccgg ttcccggatc cggggaagag gccccc
//
LOCUS       DATGYW010000418         3112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_306174, whole genome shotgun sequence.
ACCESSION   DATGYW010000418 DATGYW010000000
VERSION     DATGYW010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3112
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306174"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            233..1381
                     /locus_tag="VK429_05855"
     CDS             233..1381
                     /locus_tag="VK429_05855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015724087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN91368.1"
                     /translation="MKGRKWGILAVLMAVFLTGAIAQAAEPIKIGAILSVTGPASFLG
                     APEAKTLEMVVQDTNSKGGILGHKIELIIKDSGASPEKAFSFAKQLIEEEKVFAIIGP
                     STSGETMKIKSVAEAGKTILLSCAAADAIVDPVAKYVFKTPQKDSDAILKIFQQMKKM
                     KISRIGVLSSNTGFGNSGKGQIEKLAPQHGITIAANEVYDKAASDLTAEVTKIKAANV
                     QAIVNWSIEPAQAIVIKNARQIGLKVPIFQSHGFGNIKYVEAAGAAAEGVMFPAGRLL
                     VADALPNSDPQKALLLKYKKDYMSFCSGEECSTFGGHAYDAYIILMKGIEKAKSTDKE
                     AVRTAIENLKGVVGTAGIFNFSPTDHSGLGIDAFEMLTVKNGKFAILK"
     gene            1498..2349
                     /locus_tag="VK429_05860"
     CDS             1498..2349
                     /locus_tag="VK429_05860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015402378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN91369.1"
                     /translation="MTYGTIYAIVAIGFNIIYNATGIINFAQGEFVMLGGMTAVTLNQ
                     FVPMPLAILLAVVLTMIVGAVIEIVFIRWLYKPSVLRMVIITIGISILIREIALHIWG
                     ESVRALPYFTGSSTSSINLGGVYISSQVLWVVGIGALAVAALTAFFNLTMLGRQMRAC
                     AANRDAARLCGIDAKNMVTLSFMLSAAIGAIGGAVVCPITYVQYDSGTPLAIKGFTVA
                     ILGGLGNSTGAVGAGMILGILESFSIWVLPTAYKEAISIAILLAILFVKPSGIFGSAE
                     AARLKEF"
     gene            2349..>3112
                     /locus_tag="VK429_05865"
     CDS             2349..>3112
                     /locus_tag="VK429_05865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015722821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN91370.1"
                     /translation="MARRYLPVVAFGVLLIAIQLATRVTGTPYHLTQLTMTAYYSLII
                     VGLCMLIGYAGQISLGHAGFFAIGGYVAAFLTTCNLKLHPGVIVSLLEKSGMLVARTD
                     AYGGSLLTVHPWLAFVAAILLTVVIAYLVGGPVLKLKGHYLAMATLGIGIIVYRIVLG
                     TGFLGAADGISDVPGFPLPAGLVISGNSSARVSNYYLAWGLVILGMVLLLNLIDSRVG
                     RALSAVHGAEDAAGAMGIPTARYKLNTFVLSAVFAAV"
BASE COUNT          594 a          934 c          982 g          602 t
ORIGIN      
        1 gccggggggg gaaattcgca tgaggggaaa tataacatgg tattcggacg gcactcgaat
       61 taagatagga gtcgttccgc ttgcggaaag gaccgtcgat ttttgtaaaa cggcgtatcg
      121 atcgtttgtt gacgggaaaa atgtattgtg gtactgtttt gcgcatttat cgttttatcc
      181 catggtcgaa ccgatggcga atggagatcc caacgaacgg aaggagagag aaatgaaggg
      241 aaggaaatgg gggattctgg cagttctgat ggcggtcttt ctgacggggg cgattgcgca
      301 ggccgcggag ccgatcaaga tcggtgcgat cctgtcggtg accgggccgg cgtcattcct
      361 cggagcgccc gaggcaaaaa cgctcgagat ggtcgtccaa gacacgaaca gcaagggagg
      421 tatccttggg cataagatcg agctgatcat caaggattcc ggcgccagcc cggagaaggc
      481 cttttcgttc gccaagcagc tgatcgagga agagaaggtg ttcgcgatca tcggtccctc
      541 gacgagcggc gagacgatga agatcaagag cgttgccgag gccgggaaga ccatcctcct
      601 gtcctgcgcg gcggccgatg cgatcgtcga ccccgtggcg aagtacgtgt tcaagacccc
      661 gcagaaggac agcgacgcaa tcctcaagat cttccagcag atgaagaaga tgaagatctc
      721 caggatcggc gtcctatcga gcaataccgg attcgggaac tccgggaagg ggcagatcga
      781 gaaactcgcg ccgcagcacg ggatcacgat cgccgccaat gaggtgtacg acaaggccgc
      841 cagcgacctg acggccgagg tgaccaaaat caaggccgcc aatgtccagg cgatcgtaaa
      901 ctggtcgatc gagccggcgc aggcgatcgt gatcaagaac gcgcgccaga tcggcctcaa
      961 ggtccccatc ttccagagcc acgggttcgg gaacatcaag tacgtcgaag ctgccggcgc
     1021 ggcggcggaa ggggtcatgt tcccggcagg ccggctcctg gtcgccgacg cgctcccgaa
     1081 tagcgacccc cagaaagcgc tgctcctcaa gtacaagaag gattacatgt cgttttgctc
     1141 gggggaggag tgcagcacct tcggcggtca cgcctacgac gcctatatca tcctcatgaa
     1201 ggggatcgag aaggcgaagt ccacggacaa ggaggcggtc cggaccgcca tcgagaacct
     1261 caagggcgtc gtcgggaccg ccggcatctt caacttctcc ccgacggatc acagcggcct
     1321 tggcatcgac gccttcgaga tgctgaccgt gaagaacggg aagttcgcca tactgaagta
     1381 gaagggaccg gaagggctgc cgttccgatc gggagtacgc gcgtcgcgcg cgtgctcccg
     1441 atcgtttgat gaaaggagac gggcctggaa ttcttctttc aatatctggt cgctggaatc
     1501 acgtacggga cgatctacgc gatcgtcgcg atcgggttca acatcatcta caacgcgacc
     1561 ggcatcatca acttcgcgca gggcgagttc gtgatgctcg gcggcatgac cgccgtcacg
     1621 ctgaaccagt tcgttcccat gccgctggcc atcctgctcg cggtcgtcct gacgatgatc
     1681 gtcggcgcgg tcatcgagat cgttttcatc cgctggcttt acaagccttc ggtgctgcgg
     1741 atggtcatca tcaccatcgg catctcgata ctcatccgcg agatcgccct gcacatctgg
     1801 ggggaaagcg tccgtgcgct cccctatttc accggttcgt cgacgagctc catcaacctg
     1861 ggcggggtct acatctcgtc gcaggtcctc tgggtggtcg gtatcggtgc cctcgcggtc
     1921 gcagcgctga ccgcgttctt caacctgacg atgctgggcc ggcagatgcg cgcgtgcgcg
     1981 gcgaaccggg acgccgcgcg cctttgcggc atcgacgcga aaaacatggt caccctctcg
     2041 ttcatgctca gcgccgcgat cggcgccatc ggtggcgccg tcgtctgccc gatcacctac
     2101 gtccagtacg acagcgggac gccactcgcg atcaaggggt tcaccgtcgc catcctcggg
     2161 ggactcggaa acagcacggg cgccgtcggg gccggcatga tcctggggat cctcgagtcc
     2221 ttcagcatct gggtcctccc caccgcgtac aaggaggcga tctcgatcgc catccttctc
     2281 gccatcctgt tcgtcaagcc gagcggcatc ttcggcagcg ccgaggccgc gcggctcaag
     2341 gaattctgat ggcgcggaga tatttaccgg tcgtcgcctt cggcgtcctc ctcatcgcga
     2401 tccagctggc gacccgcgtt accggtactc cctaccacct cacccagttg accatgaccg
     2461 cgtactattc gttgatcatc gtcggcctct gcatgctcat cggatacgcc gggcagatct
     2521 cgctcggcca cgccgggttc ttcgccatcg gcggatacgt cgcggcgttc ctgacgacct
     2581 gcaacctgaa acttcacccg ggggtcatcg tttccctgct ggagaaatcg gggatgctgg
     2641 tcgcccgcac cgacgcgtat gggggcagcc tcctgacggt tcacccgtgg ctggcgttcg
     2701 tggccgcgat ccttctgacg gtcgtcatcg catatcttgt gggagggccg gtcctgaagc
     2761 tcaagggcca ctacctggcc atggcgaccc tcgggatcgg aatcatcgtc tatcgcatcg
     2821 tgctgggcac gggatttctc ggggcggcgg acgggatctc cgatgtcccc gggttccccc
     2881 tgccggcggg gttggtcatc tccgggaatt cctccgcgcg ggtctccaac tattacctgg
     2941 catgggggct cgtgatcctc gggatggtgc tcctgctgaa cctgatcgat tcccgggtgg
     3001 gaagggccct ctcggcggtc cacggcgccg aggatgcggc gggagcgatg gggattccga
     3061 cggcccgcta caagttgaac acgttcgtgt tgagcgcggt gttcgccgcc gt
//
LOCUS       DATGYW010000419         2960 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_412125, whole genome shotgun sequence.
ACCESSION   DATGYW010000419 DATGYW010000000
VERSION     DATGYW010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412125"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(159..938)
                     /locus_tag="VK429_05870"
     CDS             complement(159..938)
                     /locus_tag="VK429_05870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012529092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HLN91371.1"
                     /translation="MVRRDKSNYIIQSVAHALDVLEEFRDETEELGVTELSKKLKLHK
                     NNVFRILATLQSRNYIEQNRSNDNYRLGIKCLELGQTFIHQRGLLKQARPILQELAEA
                     TGETSYISILRGSEVIYLDAVEASSTVRVISRVGLHMPIHATAAGKAMVAYDSDDELR
                     KLLPGELRRFAKATRTNVDDLIKEVALVRERGYATDLEEFEEGLRCIGAPVRDYTRKV
                     VGAISVSGPAHRLTDERIATVVGPELDRAGKALSARLGFRE"
     gene            complement(1063..1632)
                     /locus_tag="VK429_05875"
     CDS             complement(1063..1632)
                     /locus_tag="VK429_05875"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLN91372.1"
                     /translation="MKRSGVLLLFGLLLALAAVLSLAGCKKKEPPAPVGEVEPIRLNA
                     VAEIENYKEILRKDPNNLQALIGIGNLYFDTKQDLLAIENYRKALALDSTNSNVRTDM
                     AICYRRSGNPVQAIEELKKAISTSPRHAQSRYNLGVILIQDMQDVEGGIKAWEALLES
                     VPDYPYRENLKAEVARMRSMQGSGKQVYK"
     gene            complement(1629..2123)
                     /gene="folK"
                     /locus_tag="VK429_05880"
     CDS             complement(1629..2123)
                     /gene="folK"
                     /locus_tag="VK429_05880"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HLN91373.1"
                     /translation="MSSRHRRREAVLLLGSNQGRRVRRIRDAVARLSRETELLAVSGI
                     YASEPFGRSRQPWFLNLAVRAATGRSPWGLLALAKRLEQEAGRRGGARWGPRTLDVDI
                     LLLGDAVIDLPGLVIPHAAMAQRRFCLLPAAEVAPGAVVPTYGRTVSQLLDACEDPLE
                     VIAL"
     gene            complement(2107..2871)
                     /locus_tag="VK429_05885"
     CDS             complement(2107..2871)
                     /locus_tag="VK429_05885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013821422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HLN91374.1"
                     /translation="MRIARYEFEGRARYGLVDTESGTVREIAGDPFDRVEATGKTRRL
                     EEVRLLAPVIPGKIVAVGLNYRDHAREMGKTIPEEPLLFLKAPSALNDPEGDIVYPSQ
                     SQRVDYEAELAVVIGRVAKNVKEKDAAGHILGYTCINDVTARDLQVKDVQYTRAKGFD
                     TFAPLGPWIVTDFDPTEASVRCLVNGEVRQDGNTREMGASVHRLVEFISSVMTLFPGD
                     VIATGTPPGVGSLRVGDVVTVEVGGIGPLTNRVVAP"
     gene            complement(2868..>2960)
                     /locus_tag="VK429_05890"
     CDS             complement(2868..>2960)
                     /locus_tag="VK429_05890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002519037.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate reductase C-terminal
                     domain-containing protein"
                     /protein_id="HLN91375.1"
                     /translation="FARGAVRAAAWVLGKPPGLYDMADVLGVGK"
BASE COUNT          483 a          988 c          940 g          549 t
ORIGIN      
        1 cgaaggatcc ggtcccgttt ctctcgaccg ctgttcggtc ccctcctcgc catcgtgccc
       61 tcccttcctg aatgaatctc cattcactca ggaaggtaca tttcctccac gggcgtgtca
      121 aggaaaggac gtttgatttg agtagaagga cctcccggct attcgcggaa accgaggcgc
      181 gccgagagag ccttccccgc ccgatcgagc tccgggccga ccacggtggc gatcctctcg
      241 tcggtaagcc ggtgcgccgg gccggagacg ctgatcgcgc cgaccacctt gcgggtatag
      301 tcgcgcacgg gggcgccgat gcagcgcagc ccctcctcga attcctcgag atcggtggcg
      361 tacccacgct cccgcacgag cgcgacctcc ttgatgagat cgtcgacatt ggtccgggtg
      421 gccttcgcga agcggcgaag ttcgcccggc agcagcttcc tcaactcgtc gtcggagtcg
      481 taggcgacca tggccttccc cgcggcggtg gcgtggatcg gcatgtgcag gccgacgcgg
      541 gagatgacgc ggaccgtgga ggaggcctcc accgcgtcga gatagatcac ttcggacccc
      601 cgaaggatgg agatgtagct cgtctcgccc gtggcctcgg caagctcctg caggatcggc
      661 cttgcctgtt tcagcagtcc gcgctggtgg atgaaggtct ggcccagctc gaggcacttg
      721 atcccgaggc ggtagttgtc gttggagcgg ttctgctcga tgtagttgcg tgactggagc
      781 gtggcgagga tgcggaagac gttgttttta tggagtttca gcttcttgct gagctccgtg
      841 acccccagtt cctccgtttc gtcccggaac tcctccagga cgtcgagggc gtgggcgacc
      901 gactggatga tatagttcga tttgtctcga cggaccatgg aaagcccccc gtgggtggaa
      961 tcgtttcata acaaaacaac gttagatata ttggattgac gtgcgcgtgt caacagaaag
     1021 atagaaccgg attatatttc ccgaatctac tggtgcaacg gtctacttgt agacctgctt
     1081 gccggatccc tgcatcgagc gcatcctcgc gacctctgcc ttcaggttct cccgatacgg
     1141 gtagtccggc acgctttcga gcagcgcttc ccacgccttg atcccgccct cgacatcctg
     1201 catgtcctgg ataaggatca ctccgaggtt gtagcgggac tgcgcgtgcc gcgggctggt
     1261 cgagatcgcc ttcttgagtt cctcgatcgc ctggacggga ttcccgctgc ggcggtagca
     1321 gatcgccatg tcggtccgca cattcgagtt cgtggagtcg agcgcgagcg ccttccggta
     1381 gttctcgatc gccagaagat cctgtttcgt gtcgaaatag aggttcccga tgccgatcag
     1441 cgcttgcagg ttgttcggat ccttccgcag gatctccttg taattctcga tctccgccac
     1501 ggcgttcagg cggatcggct ccacctcccc caccggggcg gggggctcct tcttcttgca
     1561 cccggcgagt gaaaggaccg ccgcaagtgc cagcaggagg ccgaacagga gtagaacgcc
     1621 gcttctcttc ataacgcgat cacctcgagg gggtcttcgc acgcgtccag caactgcgac
     1681 acggtgcggc cgtacgtggg aacaaccgcg cccggtgcca cttcggcggc gggcaggagg
     1741 cagaaacggc gctgcgccat ggcggcgtgc ggaatcacga gccccggcag gtcgatcacg
     1801 gcgtccccca gaaggaggat gtcgacgtcg agcgtccgtg gaccccaccg cgcgccgcca
     1861 cggcgtcctg cctcctgctc gaggcgcttc gccagagcga gcagtcccca cggggatcgc
     1921 cctgtcgccg cgcggaccgc caggttgagg aaccacggct gacgggaccg cccgaacggt
     1981 tcgctggcgt atatcccgga gaccgcgagc agttcggttt cgcgggagag ccgggccacc
     2041 gcgtcgcgga tccgccggac gcgcctcccc tggttgcttc cgaggaggag aaccgcctcg
     2101 cgacgcctat ggcgcgacga cacggttggt gagggggccg atcccgccca cctcgaccgt
     2161 cacgacatcc cccacgcgga gcgacccgac gccgggaggc gttccggttg cgatcacgtc
     2221 cccggggaac agcgtcatga cggaggagat gaactccacc agccggtgga cggatgcacc
     2281 catctcccgc gtgttgccgt cctgccggac ctcgccgttc acgaggcagc ggacggacgc
     2341 ttcggtcggg tcgaaatcgg taacgatcca cggccccagc ggggcgaacg tgtcgaaccc
     2401 cttggcgcgg gtgtactgca cgtccttcac ctggaggtcg cgcgcggtca catcgttgat
     2461 gcaggtatac ccgaggatgt gccccgccgc gtccttctcc ttcacgttct tcgccacccg
     2521 gccgatcacg accgcgagct cggcctcgta atccacacgc tgcgactgcg acggatagac
     2581 gatatccccc tcgggatcgt tgagcgcgga gggcgccttg agaaacagga gcggctcctc
     2641 ggggatcgtc ttccccatct cgcgcgcgtg gtccctgtaa ttgaggccca ccgcgacgat
     2701 cttcccgggg atcaccgggg caaggaggcg gacctcttcg agccgccgcg tcttgccggt
     2761 cgcctcgacg cggtcgaacg gatccccggc gatctcccgg accgtcccgc tctccgtgtc
     2821 gaccaggccg taccgcgccc gcccctcgaa ttcgtaccgc gcgatcctca tttcccgacg
     2881 ccgaggacgt cggccatgtc gtagagcccc ggcggcttgc cgaggaccca cgcggcggcc
     2941 cgcacggcgc cgcgggcgaa
//
LOCUS       DATGYW010000420         1639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_504429, whole genome shotgun sequence.
ACCESSION   DATGYW010000420 DATGYW010000000
VERSION     DATGYW010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_504429"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..861
                     /locus_tag="VK429_05895"
     CDS             <1..861
                     /locus_tag="VK429_05895"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HLN91376.1"
                     /translation="KDVEGFLGSGGVPPAGPPEATPAPGPKPSVVPPTTGGAPAPKAA
                     PSSSAKVSEGKPPAASEDQVVPWTPIRKRIAEHMVRSKHTSPHVHIFAEVDMHKVAAV
                     RAKAKKEGVNLTYLPFVIHAAAKALRETPIMNAIVSGESTVLKKDIHIAVAVDTEKGL
                     LVPVLRHADRMSLKEISAAMDDFGARAKSGKISPDELSGGTFSITNPGIKGNLFGTPI
                     INQPQVGILRLGQIVKRPVVIDVDGEDSIVIRPMMYLGCAYDHRVIDGVAGNGFLYRV
                     REILEAGDFA"
     gene            879..1505
                     /gene="lipB"
                     /locus_tag="VK429_05900"
     CDS             879..1505
                     /gene="lipB"
                     /locus_tag="VK429_05900"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: protein motif:HMM:NF010925.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HLN91377.1"
                     /translation="MEIVWLGEVAYREALDLQLSCLDRRAARRIPDTLLLLTHPHVYT
                     LGRAGDEANLLVPKESLAAEGVPVERVGRGGDITYHGPGQLVGYPIVLMEKPDVHKFV
                     RSIEAALIDAVSAFGVASRRIEGLTGVWAGERKIASIGVGIRKWVTYHGFALNVTTDL
                     SMFRRIHLCGLKGREATSIARETGSAPTMEAVREAVAAACERHLQGFA"
BASE COUNT          274 a          538 c          580 g          247 t
ORIGIN      
        1 aaggatgtgg agggattcct cggttccggc ggcgtcccac ccgccggtcc gccggaagcg
       61 acccccgcgc cggggccgaa accgtccgtt gttcctccca cgaccggggg ggcgcccgca
      121 ccgaaggcgg cgccttcctc ctccgcgaaa gtttcggagg gcaagccccc tgcggccagt
      181 gaggaccagg tcgtcccgtg gacgccgatc cggaagagga tcgcggagca catggtccgg
      241 agcaagcaca cctcgcccca cgtccacatc ttcgcagagg tggacatgca caaggtggcg
      301 gcggttcggg ccaaggcgaa aaaggagggg gtgaacctca cctatcttcc cttcgtgatc
      361 cacgccgcgg cgaaggcgct gcgcgagacc ccgatcatga acgcgatcgt gtccggagag
      421 agcacggtac taaaaaagga tatccacatc gccgtcgcgg ttgacacgga gaaggggctg
      481 ctcgtccccg tgcttcgcca cgcggaccgg atgtccctga aggagatctc cgcggcgatg
      541 gacgacttcg gcgcgcgggc caagtcgggg aagatctctc cggacgaact ctccgggggc
      601 accttcagca tcaccaaccc ggggatcaag gggaacctct tcggcacccc gatcatcaac
      661 cagccccagg tggggatcct ccggctgggg cagatcgtga agcggcccgt ggtgatcgac
      721 gtggacggag aagactccat cgtcatccgg ccgatgatgt acctcggctg cgcgtacgac
      781 caccgcgtca tcgacggcgt ggcggggaac ggcttcctgt accgggtccg ggagatcctc
      841 gaagcggggg atttcgccta gggccgaagg ggcgctccgt ggagatcgtc tggctggggg
      901 aggtcgcgta ccgggaggcg ctcgacctcc aactctcctg cctcgaccgc agggcggccc
      961 ggcggatccc ggacaccttg cttcttctca cccacccgca cgtctacacc ctgggccgcg
     1021 ccggagacga ggcgaacctg ctcgtcccga aggaatcgct cgcggcggag ggtgtcccgg
     1081 tggaacgcgt cgggcggggc ggagacatca cctaccatgg tccggggcaa ctggtcgggt
     1141 acccgatcgt tctgatggag aagccggacg tccacaagtt cgtccggtcg atcgaggcgg
     1201 cgttgatcga cgccgtgagc gcgttcggag tcgcctcccg gcggatcgag gggctgacgg
     1261 gcgtgtgggc gggggagcgg aagatcgcct ccatcggtgt cggcatcagg aagtgggtca
     1321 cctaccacgg ctttgccctc aacgtgacga ccgacctttc catgttccgg cgcatccacc
     1381 tttgcggcct gaaggggcgg gaagcgacgt cgatcgcccg ggagacgggg agcgccccga
     1441 cgatggaggc ggtccgcgag gcggtcgccg ccgcctgcga acgtcacctg caggggttcg
     1501 cgtgaacccg ccccgcgcgc cgcgccccga ctggctgaaa gtccgcgctc cctcggggaa
     1561 acgggtggag gaggtgtcgg ggacgcttgc ccggtttggc ctgcgcaccg tatgccgcga
     1621 ggcccggtgt ccgaacgtg
//
LOCUS       DATGYW010000421         1530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_412291, whole genome shotgun sequence.
ACCESSION   DATGYW010000421 DATGYW010000000
VERSION     DATGYW010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412291"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1037)
                     /locus_tag="VK429_05905"
     CDS             complement(<1..1037)
                     /locus_tag="VK429_05905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017839312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HLN91378.1"
                     /translation="MEEFARIQRLPPYVFAVVVELKSKLRHAGEDIIDLGMGNPDLPT
                     PKHIVDKLVEAVRNPRNHRYSLSRGIPKLRLAICNWYKRKYNVELEPETEAIATIGAK
                     EGLSHLVLATMGPGDIALVPSPTYPIHTYSVIIAGADVRSISLTSGEGDFIERAERAI
                     KMIWPRPKMMILSFPHNPTTQVVDLDFFKRVVAFAKEHKLLVIHDLAYADLVFDGYKA
                     PSILQVAGAKDVAVEMYSMSKGYSMPGWRVGFVVGNKRMVGALTRMKSYLDYGIFQAI
                     QVAATVALNGPHRVVDEAVEIYRKRRDCLVDGFARIGWEFEKPKGTMFVWAPIPEPFR
                     EMGSVEFSKLLL"
     gene            complement(1185..>1530)
                     /locus_tag="VK429_05910"
     CDS             complement(1185..>1530)
                     /locus_tag="VK429_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014368896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLN91379.1"
                     /translation="RRLDDLAEGDYRRNSPRFSGANLSQNLSLVDRLTEIAARKKCHP
                     SQLALAWLLARGGDIFPIPGTKHVNRLEENVGALQVQLTPEEVARLDAAFPAGAAAGT
                     RYPEHAMKAVHR"
BASE COUNT          292 a          478 c          465 g          295 t
ORIGIN      
        1 aggagaagct tcgaaaactc gacggagccc atctcacgga acggttccgg aataggcgcc
       61 cacacgaaca tcgtaccctt cggcttctcg aactcccacc cgatgcgggc gaatccatcg
      121 acgaggcagt ccctgcgctt ccgatagatt tcgacggcct cgtcgaccac gcggtgcggc
      181 ccgttgagcg ccacggttgc ggcgacctgt attgcctgga aaatcccgta gtcgaggtag
      241 ctcttcatcc gggtcagcgc cccgaccatc cgcttgttcc cgacaacgaa accgactcgc
      301 caaccgggca tggaataccc cttcgacatg gaatacatct ccacggccac gtccttggcc
      361 cctgcaacct ggaggatcga gggggccttg tacccgtcaa agacgaggtc cgcgtaggcg
      421 agatcatgga tgaccagcag cttgtgctcc ttggcgaacg cgacgacgcg cttgaagaag
      481 tcgaggtcca ccacctgggt cgtagggttg tggggaaagg agaggatcat catcttcggc
      541 cgcggccaaa tcatcttgat cgcccgctcg gcgcgctcga tgaaatcccc ttccccgctt
      601 gtgagggaga tcgaccgaac gtccgccccg gcgatgatca ccgaataggt gtggatcggg
      661 taggtcgggc tggggacgag agcaatgtcc ccggggccca tcgtcgccag tacgaggtgg
      721 gacaacccct ccttcgctcc gatcgtggcg atcgcttccg tctccggttc gagttccacg
      781 ttgtatttcc gtttgtacca gttgcagatg gccagccgca gcttcgggat gccccgggaa
      841 agcgaatacc tgtggttccg ggggttgcgc accgcttcga cgagcttgtc gacgatgtgt
      901 ttcggcgtgg gcagatcggg gtttcccatc cccaagtcga tgatgtcctc gccggcgtgg
      961 cgcaatttcg acttgagttc caccacgacg gcgaaaacgt acggaggcaa acgctggatt
     1021 ctcgcgaact cttccattga ggggtctcct gttcagtgta aacaaacatg ctaatgaatc
     1081 gcgccctcca agtcaatttg ccgaccggga agacgctatc agaggggatg gatgacgagg
     1141 gggacattcc tcccgctgcc gatatcatgc gggaagaagg ccgtttaccg gtggaccgcc
     1201 ttcatcgcat gctcggggta ccgggtccct gcggcagctc ccgcggggaa cgccgcgtcg
     1261 agccgggcga cctcctccgg cgtcagttgc acctgaagtg cccctacgtt ttcctccagg
     1321 cgattcacat gcttggtccc cggaatcggg aagatgtccc ctccccgggc caacaaccac
     1381 gccagagcca gctgggaggg atggcacttc ttccgggctg cgatctccgt gagacggtcc
     1441 accagcgaga gattttggga caggttggcc cccgaaaaac gcggggagtt gcgccggtag
     1501 tcaccctcgg caaggtcgtc cagcctccgg
//
LOCUS       DATGYW010000422         1621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_306600, whole genome shotgun sequence.
ACCESSION   DATGYW010000422 DATGYW010000000
VERSION     DATGYW010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306600"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..740)
                     /locus_tag="VK429_05915"
     CDS             complement(<1..740)
                     /locus_tag="VK429_05915"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HLN91380.1"
                     /translation="MSTLKTRYESVRSGFEIADIGFLALRVIALAGTIGWLLVAPVPR
                     ETVSSFLWIAVFFLSYCVLGYALLFFRFDRKRDIYRIFLLFDLAFVYLLIVHSGGFAS
                     GFFLGFYLLTALHSFYYGYRSGLIVAVVCAAIYLLASFRVSPIEPIDFLLRTTFLFLI
                     ALPIGLLSAILREDKGKIESLNRDLSDSLETMKHLQGKLVEVEKLSALGRLTADVAHE
                     IRNPLTAIGGFAKRLEKRLPENSAEKENA"
     gene            complement(837..1505)
                     /locus_tag="VK429_05920"
     CDS             complement(837..1505)
                     /locus_tag="VK429_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009633080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HLN91381.1"
                     /translation="MCGRFTLFEPDKVLTREFGVSGVPPRSPRYNIAPSQPVVAVRAT
                     PAGSGREIALLRWGLIPSWSKDPAIGNRLINARAETAREKPSFRNAFRRHRCLIPANG
                     FYEWQRQERGKQPYFVRMRDGRLFAFAGMWDRWENPEKGVIETCTILTTVANAVLAPI
                     HDRMPVILPPTEYARWLDPALRDTDSLAPLLVPFPPEDMLALPVNPRVNSPAVDDEDC
                     IAPL"
BASE COUNT          350 a          448 c          527 g          296 t
ORIGIN      
        1 gcattctctt tttccgctga attctccgga aggcgcttct ccaggcgctt tgcgaaccca
       61 ccgatcgcgg tcaggggatt gcggatctca tgggcaacgt cggcggtgag tctcccgagt
      121 gccgataact tctccacctc cacgagcttt ccttgaaggt gcttcatggt ttccagtgaa
      181 tcggacaggt cccggttgag cgattcgatc ttccccttgt cctcgcgaag gatcgccgaa
      241 aggaggccga tcgggagtgc gatgaggaaa aggaaggtgg tacggagcag aaagtcgatc
      301 ggttcgattg gggagacgcg aaagctggca aggaggtaga tcgccgcgca cactacggcc
      361 acgataaggc cgctgcgata gccgtaatag aaggaatgca gggcggtgag gagatagaat
      421 cccaggaaaa aaccgctggc gaacccgccg gaatgtacga tcagcaggta gacgaacgca
      481 agatcgaaca ggaggaagat ccgatagatg tccctcttcc tgtcgaatcg gaaaaacagg
      541 agggcgtagc ccaatacgca gtaagagagg aagaataccg cgatccacag gaagctcgac
      601 acggtttccc gggggacagg tgctacgaga agccagccga tggtgccggc cagcgcgatg
      661 acccggaggg ccaggaaccc gatatccgcg atctcgaaac cgcttcggac ggactcgtaa
      721 cgggtcttca gggtagacat cgccttgcct cccggatcag gaccagtttc aacttgattt
      781 tacatcagtc ctgcccccga gcgactcgat caatcgattc gacgattgag gccggttcat
      841 agaggagcga tgcaatcctc gtcgtcgacg gcggggctat tgacccgggg attcaccggc
      901 aatgcgagca tatcttccgg cgggaacggt acgagaagcg gggccaggga atccgtgtcc
      961 cgtagcgccg gatcgagcca ccgtgcgtac tccgtcgggg gaaggatcac cggcatccgg
     1021 tcgtggatcg gtgccaggac ggcgttcgca acggtcgtca ggatcgtgca cgtttcgatg
     1081 acgccctttt ccgggttttc ccatcggtcc cacattccgg cgaaggcgaa gagacgcccg
     1141 tcacgcattc ggacaaagta cggctgtttc ccgcgctcct gtcgctgcca ctcatagaac
     1201 ccgttggcgg ggatcaggca acgatggcgt cggaacgcat tgcggaagga cggtttttcg
     1261 cgggcagttt ccgctcgggc gttgatgagc cggttgccga tcgcgggatc tttcgaccag
     1321 gaagggatga ggccccagcg gagaagggcg atctcgcgac cgcttcccgc aggcgtcgcg
     1381 cggacagcca cgacgggctg ggacggggcg atgttgtagc gtggtgaacg cggggggacg
     1441 ccggagacac caaactccct ggtgaggact ttatccggct cgaacagtgt gaaccggccg
     1501 cacatcgttc aacctccacc catgtctgcg ggagagcgga gtcagggaag ggcttcttcc
     1561 tggcaggaca gcggaatcat tcgttcgatt cgggggacaa tcagaggtcc gcaccattat
     1621 g
//
LOCUS       DATGYW010000423         2391 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_504526, whole genome shotgun sequence.
ACCESSION   DATGYW010000423 DATGYW010000000
VERSION     DATGYW010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_504526"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            348..1217
                     /locus_tag="VK429_05925"
     CDS             348..1217
                     /locus_tag="VK429_05925"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: protein motif:HMM:NF003742.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HLN91382.1"
                     /translation="MSTKKARKKGTPPPVYVVSGGTGASGQQIVETVLAQFPTLQVPI
                     IVRNHVRSLQQVEIAVKEAKAEGGTVVHTFVDSSLREAIQRLGRKHGVVMIDLMGPLL
                     QQMALQGSAEPLGQAGLYRKLRKDYFDRVEAIDFAVSHDDGNGSVDISRADVVILGVS
                     RCGKTPLSMYLAVHGWKVANIPIVKGIPLPGELSRIDQRRVIGLNIEPGRLLEHRRKR
                     EERMGMGKVSMMSYSGPPEVLEELEAARRIYREGGFHVVEVTDKPIEIIADEIIKFIS
                     HNLDHPQRQPLPY"
     gene            complement(1237..>2391)
                     /locus_tag="VK429_05930"
     CDS             complement(1237..>2391)
                     /locus_tag="VK429_05930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014868068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HLN91383.1"
                     /translation="GGMTCHAAIVSRELGIPSIVGTGDATVKVASGREITVCCAEGET
                     GTVYDGALPFRVEKVDLTGLPRPRTKIMMNLGNPEEAFSLYRIPNDGVGLARMEFIIG
                     NHIKVHPMALVHPERVEEGKDREEIEELTRGYPDKESYFVERLAEGIGTIAAAFYPRP
                     VVVRLSDFKTNEYASLLGGKAFEPVEENPMIGFRGASRYYDERYREGFALECRALRRV
                     RDVMGLKNVIPMIPFCRTVTEGEKVLAEMAKNGLVRGEGGLKVYVMCEIPNNVILIDA
                     FSRLFDGFSIGSNDLTQLTLGVDRDSALVAHVFDERDPGVMALISRVIEGGRRNRVHS
                     GICGQAPSDYPEFAAFLVREGIDSISLNPDSVLKITMRVLEMEKEILTSR"
BASE COUNT          456 a          775 c          738 g          422 t
ORIGIN      
        1 gtcaccggga atcgccccaa tccatagacg ctcacgcccc ccttctcacc gaccttgaac
       61 tccagcttcc cgcttttctt cgcttcggtc ctcttctcaa gctcggcgat ccgagccagc
      121 aactcctctt tggtcggctc cggcatcggc agcgtcctcc ccttttcggt cgatgataca
      181 gtataccgat cctcaccccc aagggagggc ctcgcatcgt ccggacgagg ggaggcagac
      241 cgttgcggag gacaggcagg gagatcgcgg aaaggatacc cgggagggat tccacctgtt
      301 ggaaaccgcc ccgccacctg ataaattcaa atgcaaggat gggaacagtg agcacgaaaa
      361 aggcaagaaa gaagggcacc ccgccgccgg tctacgtcgt ctccggcggt acgggggcaa
      421 gcggccagca gattgtagag accgtgcttg cgcagttccc gacgctccag gtgccgatca
      481 tcgtcaggaa ccacgtccgg agtctccagc aggtggaaat cgcggtgaag gaggccaagg
      541 ccgaaggcgg gaccgtggtg catacgttcg tggacagctc cctgagggag gcgatccagc
      601 gcctcggcag gaagcacggg gtcgtgatga tcgatctcat ggggcccctg ctccaacaga
      661 tggcgttgca gggcagcgcc gagcccctcg ggcaggccgg cttataccgt aagctccgca
      721 aggattactt cgatcgggtc gaggccatcg atttcgccgt gtcccacgac gatgggaacg
      781 ggtccgtgga catctcccgg gccgatgtcg tcattctcgg cgtctcgcgg tgcggaaaaa
      841 caccattaag catgtacctg gcggtgcacg ggtggaaagt ggcaaacatt ccgatcgtca
      901 agggcattcc gctgccgggc gagctctccc ggatagatca gcgccgggtg atcggcctga
      961 acatcgagcc cggccgcctc ctggaacata gaaggaagcg ggaggaacgc atgggcatgg
     1021 gcaaggtcag catgatgtcc tactccggcc cccccgaggt cctcgaggaa ctcgaggccg
     1081 cgagaaggat ctaccgggaa ggcgggtttc acgtcgtaga agtcacggac aagccgatcg
     1141 agatcatcgc cgacgaaatc atcaagttca tcagccacaa cctggaccat ccgcaacgcc
     1201 agcccctgcc gtactgacgc cggcggccga ggcggatcac cggcttgtca ggatctcctt
     1261 ctccatctcg aggacccgca tggtgatctt cagcacggaa tccgggttga gggagatgga
     1321 gtcgatccct tcccgtacga gaaaggctgc aaattccggg tagtcgctcg gcgcctgccc
     1381 gcagatcccg ctgtggaccc ggttccgacg ccccccctcg atgacccggg agatgagcgc
     1441 catcaccccg gggtcacgct cgtcgaagac gtgggccacc agggccgagt cccggtccac
     1501 cccgagagtg agctgggtga ggtcgttgga gccgatggaa aagccgtcga agagacggct
     1561 gaaagcgtcg atgaggatca cgttgttcgg gatctcgcac atgacgtaca ccttcagtcc
     1621 cccctccccg cgcacgaggc cgttcttcgc catctccgcg aggacctttt ctccctccgt
     1681 cacggtgcgg caaaagggga tcatcgggat cacgttcttg agtcccatga catcccgcac
     1741 ccgccggagt gcacggcact cgagggcgaa tccctcccgg taccgctcgt catagtagcg
     1801 ggaggcgccc ctgaacccga tcatcgggtt ctcctccacg ggctcgaagg ctttcccgcc
     1861 gaggagtgag gcgtactcgt tcgtcttgaa gtcggagaga cggaccacca cggggcgggg
     1921 gtaaaaggcc gccgcgatcg taccgatccc ttccgccaga cgttccacga agtagctctc
     1981 cttgtccgga tagccgcggg tgagttcctc gatctcctcg cggtccttcc cctcctcgac
     2041 ccgctccggg tggaccaggg ccatggggtg gaccttgatg tggttgccga tgataaattc
     2101 catccgggcg agacccacgc cgtcgttcgg gatccggtag agggagaacg cctcctccgg
     2161 gttcccaaga ttcatcatga tcttcgtccg gggccgcggg aggccggtga ggtcgacctt
     2221 ctccacccgg aacggcagcg cgccatcgta aaccgtcccc gtctcccctt ccgcgcagca
     2281 cactgtgatt tccctgccgg acgcaacttt aacggtggcg tcccccgtgc ctacgatgga
     2341 ggggatgccc agctcgcggc tcacgatggc ggcgtggcag gtcattccgc c
//
LOCUS       DATGYW010000424         2460 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_412428, whole genome shotgun sequence.
ACCESSION   DATGYW010000424 DATGYW010000000
VERSION     DATGYW010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412428"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            45..698
                     /locus_tag="VK429_05935"
     CDS             45..698
                     /locus_tag="VK429_05935"
                     /inference="COORDINATES: protein motif:HMM:NF039842.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5752 family protein"
                     /protein_id="HLN91384.1"
                     /translation="MTVFEVRDCALLARMSGLPPAFNLRELRERIAVCGENVLFHHFC
                     ETTLRGTFDNPDYRNDFAVWSKLYLGDRVLAERLGILDPYAFPSLGDLRAATLEVIDE
                     RLSELTMIPWARPGDEFFFSEATTVVFSAGIRITQPARLGAFIRKMTNGSVYFHFLEA
                     RRRPPLGRDDFTAWLMEDEEANRPYIQALASIDFYFHTLPHLRRELGRVLNEVKVAK"
     gene            695..1933
                     /locus_tag="VK429_05940"
     CDS             695..1933
                     /locus_tag="VK429_05940"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008870199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLN91385.1"
                     /translation="MSATLSSYEAIVGSAVIRQLRQLGEKLAGTRIVHVNSTREGGGV
                     AEILEWMTPLMTELGLKASWEVIHGSGRFFEITKSIHNGLQGYPVSISGKDWKIYEDV
                     NAQNFERLRPILEEADIVFIHDPQPAHLLRLCERRKGKWIWRAHIDISHPYHPVWKSL
                     RPVVEGYDASVFSMPEFARSLRHPQFLVPPSIDPLSEKNRDLDPTEVEAVRAEFGLDP
                     SRPLLVQISRFDRFKDPVGVVAAYRMVRKVAPIQLILAGGAATDDPEGKEILEDVLEA
                     AGNDPDIHVLLLPHDSHKTVNALQRLATIILQKSTREGFGLTVTEGMWKGKPVIGGDV
                     GGIRLQVVNHHTGFLVNTPEGAALRIRYLLHHQDSIDRMGAIAREFVRENFLLTRHLR
                     EYMTLMLVTLHSDRGHLVEV"
     gene            complement(1985..>2460)
                     /locus_tag="VK429_05945"
     CDS             complement(1985..>2460)
                     /locus_tag="VK429_05945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014551585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3641 domain-containing protein"
                     /protein_id="HLN91386.1"
                     /translation="KRLNAAGYGVEGTGLELDLVSNPVGAFLPVPQESAERKFRQDLL
                     RKWGIAFNHLYTFANAPLGRFRTGLLRTGNYDRYLKTLTEGFNPSAVEKLMCRTLLSV
                     SWDGFLYDCDFNLAVERPHGNRKIHVLDVRELPPSGAPIAVGDYCYACTAGSGFT"
BASE COUNT          450 a          791 c          784 g          435 t
ORIGIN      
        1 atcgccccgg atcgaatccc ggcgaaggcc cggggaggtg cggcatgaca gtgttcgaag
       61 tgagggattg cgcgcttctg gcccggatga gcggcctgcc acccgcgttc aacctgaggg
      121 aactgcggga gcggatcgcg gtgtgcggcg aaaacgtcct gttccaccat ttctgcgaga
      181 cgacgcttcg gggaaccttc gacaaccccg attatcgaaa cgatttcgcc gtctggtcga
      241 aactgtatct tggggaccgc gtgctcgccg agcggctcgg catcctcgac ccgtacgcgt
      301 tcccctccct cggggatctt cgcgccgcaa cgctcgaggt gatcgatgag aggctcagcg
      361 aactgaccat gatcccgtgg gcccgcccgg gggacgagtt cttcttcagc gaggcgacga
      421 cggtggtgtt ctccgccggg atccggatca cgcaacccgc ccggctcggg gccttcatcc
      481 ggaagatgac caacgggagc gtgtattttc actttctgga agcccgccgc cgtccgccgc
      541 tcgggaggga cgatttcacc gcctggctga tggaagacga ggaggcgaac cggccgtaca
      601 tccaggccct cgcctccatc gacttctact tccacaccct gccacatctg cgccgcgaac
      661 tggggcgtgt cctcaacgaa gtgaaggtcg cgaaatgagc gccacactct catcgtacga
      721 agcgatcgtg ggatccgccg tcatccggca gttgcgccag ctgggggaga agctcgcggg
      781 gacccggatc gtccacgtga actccacccg cgagggcgga ggggttgcgg agatcctgga
      841 gtggatgacc ccgttgatga cggagctggg gctgaaggcg tcctgggaag tcatccatgg
      901 atccggacgt ttcttcgaga tcacgaagtc catccacaac ggtctccagg gataccctgt
      961 ttccatctcc ggcaaggact ggaagattta cgaggacgtg aacgcacaga acttcgagcg
     1021 tctccgcccg atcctcgagg aggcggacat cgtcttcatc cacgaccccc agccggcgca
     1081 cctgcttcgc ctgtgcgaac gccggaaagg gaagtggatc tggcgcgccc acatcgacat
     1141 cagccacccc taccatccgg tctggaagag cttgaggccc gttgtggaag gatacgacgc
     1201 cagtgtcttt tcgatgccgg agttcgcccg gtcgctccgc cacccgcagt tcctggtgcc
     1261 gccgagcatc gaccccttga gcgagaagaa ccgggatctg gatcccacgg aggtcgaggc
     1321 ggtccgggcg gaattcggac tggacccttc ccgccccctt ctggtccaga tctcccggtt
     1381 cgaccggttc aaggatcctg tgggcgtggt cgcggcgtac cggatggtcc gcaaggtcgc
     1441 tccgatccag ctgatcctgg cgggaggtgc ggccaccgac gatccggagg ggaaagagat
     1501 tctcgaggac gtgctggagg cggccgggaa cgacccggac atccacgtcc ttctcctccc
     1561 ccatgactcc cacaagacgg tcaacgcgct ccagcggctg gcgacgatca tcctccagaa
     1621 atcgacccgg gagggattcg gactgacggt gaccgaggga atgtggaaag ggaagccggt
     1681 catcggtggc gacgtcggcg ggatccgcct ccaggtcgtg aaccaccaca cggggtttct
     1741 cgtgaacacc cccgaagggg cggcgctccg gatccggtac ctgctccatc accaggacag
     1801 catcgaccgg atgggagcga tcgcacggga gttcgtgcgg gagaatttcc ttctcacccg
     1861 gcatctccgg gaatacatga ccctcatgct ggtcacgctt cactccgacc gtgggcacct
     1921 ggtcgaggtg tgaccgcggg ggatcatctt ccgccggccc ctacggggcc gatatcgcgc
     1981 cgcctcaggt gaagccggag cccgccgtgc aggcgtagca gtagtcgccc accgcgatcg
     2041 gggcgcccga gggagggagt tcgcggacgt ccaagacgtg gatcttccgg tttccatggg
     2101 ggcgttcgac ggcaaggttg aaatcgcagt cgtacaggaa tccgtcccag gagacggaga
     2161 ggagcgtccg gcacatcagt ttttccaccg cggagggatt gaaaccctcc gtgagcgtct
     2221 tcaggtatcg atcgtagttc cccgtccgca gtagccccgt ccggaaacgc cccagcggtg
     2281 cgtttgcgaa cgtgtacagg tggttgaacg caatccccca cttccgtaac aggtcctgcc
     2341 ggaatttccg ttctgcggac tcctgcggaa cggggaggaa cgccccgacc gggttggaga
     2401 ccagatcgag ctccagcccg gtcccttcca ctccataccc cgcggcgttc aacctcttca
//
LOCUS       DATGYW010000425         1764 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_31290, whole genome shotgun sequence.
ACCESSION   DATGYW010000425 DATGYW010000000
VERSION     DATGYW010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31290"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1648)
                     /gene="leuS"
                     /locus_tag="VK429_05950"
     CDS             complement(<1..1648)
                     /gene="leuS"
                     /locus_tag="VK429_05950"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HLN91387.1"
                     /translation="MGVKYKPQEIERKWRRKWDEAGVFRCPDELSAPKYYCLEMFPYP
                     SGRIHMGHVRVYTIGDLLARFKRMQGFQVLHPIGWDAFGLPAENAAHRHGTHPAKWTW
                     ENIAFMREQLKEMGISYDWDREFATCSPEYYKWEQLFFLWMLRDGLAYRKRATLNWCG
                     ECQTVLANEQVNRDGTCFIHDHTPVTQKELDQWFLGITKYAEELLSGHKELEEGWPAN
                     ILEMQRNWIGRSEGAEIRFPLDGGGGDITVFTTRPDTLFGATFMSMAPEHPMAMEFAK
                     RSGREREVREFVDRVARQDRIARTSEDLVKEGVFTGGYCVNPVTGKRIPVYAANFVLY
                     DYGTGAVMAVPAHDQRDFEFARKYGLPVAVVVQPEGEALDPATMTAAHEGEGRLVHSG
                     AFDGLSSEEGKRAITLHLEGKGMGRGTIQYRLRDWGVSRQRYWGCPIPVIHCEACGIV
                     PVPEKDLPVVLPEDLPYTRERGNPLAGAEDWLRVPCPSCGKPGRRETDTFDTFVESSW
                     YFLRYIDPKNDRAPLDPEKMRRFAPVDQYVGGVEHACMHLI"
     gene            complement(1639..>1764)
                     /locus_tag="VK429_05955"
     CDS             complement(1639..>1764)
                     /locus_tag="VK429_05955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005810921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HLN91388.1"
                     /translation="INEAVEIGKRFGSEESGAFVNGILDRISEIVRKKTTAEGSA"
BASE COUNT          270 a          626 c          535 g          333 t
ORIGIN      
        1 agatgaggtg catgcaggcg tgctcgactc cccccacgta ctggtccacg ggcgcgaatc
       61 ggcgcatttt ttccgggtcg agcggcgcgc ggtcgttctt cgggtcgatg taccgaagga
      121 agtaccagga ggactctacg aaggtatcga acgtatcggt ctcccggcgc ccgggcttcc
      181 cgcaggaggg gcacggcacg cggagccaat cctccgctcc ggccagcggg ttcccccgct
      241 cccgcgtgta cgggaggtcc tccggaagca ccaccggcag gtccttctcc ggtacgggga
      301 cgatgccgca cgcctcgcag tggatcaccg ggatcgggca accccagtac cgttggcggc
      361 tgacgcccca gtcgcgcagc cggtactgga tcgtcccacg gcccattccc ttcccttcaa
      421 ggtgaagcgt gatcgccctc ttcccctctt cgctcgataa tccgtcgaac gcgccggaat
      481 ggaccagacg accctccccc tcgtgcgccg cggtcatcgt cgccggatcg agcgcctccc
      541 cttcgggctg gacgacgacc gcgaccggca ggccgtactt ccgggcgaac tcgaagtcgc
      601 gctggtcgtg cgccggcacc gccatcaccg cgccggtgcc gtagtcgtac aggacgaagt
      661 tggcggcgta gaccgggatc cgtttccccg tgacggggtt cacgcaatac cctccggtga
      721 acaccccttc cttcacgagg tcctcgctcg tccgggcgat ccggtcctga cgcgcgaccc
      781 ggtcgacgaa ctccctcacc tcgcgctccc ttccggatcg tttcgcgaac tccatcgcca
      841 tcgggtgttc gggcgccatg ctcatgaagg tggcgccgaa gagcgtgtcg ggcctcgtcg
      901 tgaacaccgt gatgtcgccg ccccctccat cgaggggaaa gcggatttcc gccccctcgc
      961 tgcggccgat ccagttgcgc tgcatctcga ggatgttcgc cggccacccc tcctcgagct
     1021 ccttgtgccc ggagagcagt tcctcggcgt acttcgtgat gccgaggaac cactggtcga
     1081 gctccttctg ggtcaccggc gtgtggtcgt ggatgaagca cgtcccgtcg cggttcacct
     1141 gctcgttggc gagcacggtc tggcactctc cgcaccagtt gagcgtggcg cgtttgcgat
     1201 acgcaaggcc gtcccgcagc atccacagga aaaagagctg ctcccatttg taatattccg
     1261 gggaacaggt ggcgaactcg cggtcccagt cgtacgagat ccccatctcc ttcagctgct
     1321 cccgcatgaa ggcgatgttc tcccacgtcc acttcgccgg gtgcgtcccg tggcggtgcg
     1381 cggcgttttc ggcgggcagg ccgaacgcgt cccaaccgat cggatgaagc acctggaacc
     1441 cctgcatccg cttgaagcgc gcgagcaggt cgccgatcgt gtacacccgc acgtgtccca
     1501 tgtggatccg gccggaaggg tacgggaaca tctcgaggca gtaatatttc ggtgcggaca
     1561 gctcgtccgg gcaccggaac acgccggcct cgtcccattt ccgccgccac ttccgctcga
     1621 tctcctgcgg cttgtacttc acgccgatcc ctccgccgtt gtcttcttcc gcacgatttc
     1681 ggagatccgg tcgaggatcc cgttgacgaa cgcgccggac tcctcggagc cgaaccgctt
     1741 gccgatctcg accgcctcgt tgat
//
LOCUS       DATGYW010000426         1570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_248067, whole genome shotgun sequence.
ACCESSION   DATGYW010000426 DATGYW010000000
VERSION     DATGYW010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1570
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248067"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..293
                     /locus_tag="VK429_05960"
     CDS             <1..293
                     /locus_tag="VK429_05960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91389.1"
                     /translation="LGVALFRLSRVAEATEAFREATRIFPSYTRAHYNLGLCLLDPED
                     REGASRQLTVLSFLDPSLARRYAGLLPRRDRTEPSPPFARSPRDASRRYPPI"
     gene            complement(278..1264)
                     /locus_tag="VK429_05965"
     CDS             complement(278..1264)
                     /locus_tag="VK429_05965"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HLN91390.1"
                     /translation="MEFHRVIAARRSLRAFSQRPVETEKIERMLEAARWSPSCANRQP
                     WRFVVVGADAPSRAAVEEALDAGNAWAKRAPVLIAVGARREDAAVVESRDYFLLDTGL
                     ALMSLLYRAVDQGLLVHPMAGWKEEPLRAALGLPGDFTPAAVVAVGYAGNSGDLDEAA
                     RAKDGKPRARKPLGEIAFRSRWGEPFEGTLPSSPAKVYETEMQLRFGDTDAMGHVNNA
                     KVVTYLELGRVRFFADVMGVERVEDYRFILAEVSCRYRIPIQLNDRVVVRMYITDVYR
                     SSFRFRCDLYDPRDGRVFVEAETVQVMYDYTTGRPVPVDADFLARARDYIGG"
     gene            complement(1277..>1570)
                     /locus_tag="VK429_05970"
     CDS             complement(1277..>1570)
                     /locus_tag="VK429_05970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91391.1"
                     /translation="DGRWKIKGSYVGKEAFNTYFGYPSSMPPVYAKARGSKKWTRASR
                     TAGKGEPTIKAKSKKAGKGTKARKVRKRHTAKTAEKDLGKPLAGNSSSPRTGG"
BASE COUNT          218 a          573 c          516 g          263 t
ORIGIN      
        1 gcctcggggt ggcgctgttc cgtttgtcga gggttgcgga agcaacggag gcgttccggg
       61 aggccacccg catcttccct tcgtacacca gggcgcacta caacctgggg ctgtgcctgc
      121 tcgacccgga agaccgggaa ggggcgtccc ggcagctcac cgtgctctcg ttcctcgacc
      181 cgtccctcgc gcgacggtat gccgggctgc ttccccgccg cgacaggacg gaaccttcgc
      241 ctccgttcgc gcgctccccg cgggacgcgt cgcgccgtta ccccccgata tagtcccggg
      301 ccctggcgag gaagtcggcg tccacgggga cggggcgccc cgtcgtgtag tcgtacatca
      361 cctggaccgt ctccgcctcg acgaacaccc ggccgtcccg gggatcgtac aggtcgcagc
      421 ggaaccggaa ggagctccgg tacacgtcgg tgatgtacat ccgcacgacg acgcgatcgt
      481 tcagctggat ggggatccgg tagcggcagg agacctcggc gaggatgaaa cggtagtcct
      541 cgacccgctc cacccccatc acgtccgcga agaaccggac acggcccagc tcgaggtagg
      601 tgacgacctt cgcgttgttc acgtgcccca tggcgtcggt gtcgccgaag cgaagctgca
      661 tctcggtctc gtacaccttc gcgggcgagg aaggcagcgt cccctcgaac ggctcccccc
      721 accgcgaacg gaaggcgatc tccccgaggg gcttgcgcgc ccggggcttc ccgtccttcg
      781 cccgcgccgc ctcgtcgagg tccccgctgt tcccggcgta gccgacggcg acgacggccg
      841 ccggggtgaa atccccggga agcccgaggg cggcccgcag cggttcctcc ttccatcccg
      901 ccatcgggtg gacgagcaac ccctggtcga ccgcgcggta caggagggac atgagcgcca
      961 atcccgtgtc gaggagaaag tagtcccggg actcgacgac ggcggcgtcc tcacgccgcg
     1021 ctcccaccgc gatcagcacc ggggcgcgct tcgcccaggc gttccccgcg tcgagggcct
     1081 cctcgaccgc cgcgcgggac ggcgcgtccg cccccaccac gacgaaccgc cacggctggc
     1141 ggttggcgca cgaaggggac cagcgggccg cttcgagcat ccgctcgatc ttttccgtct
     1201 cgacggggcg ttgggagaac gcgcgcaggc tgcgccgcgc ggcgatgacg cggtggaatt
     1261 ccatcgatgc ggggtgctac cctccggtcc tcgggctgga agagttcccg gcgagaggct
     1321 tcccgaggtc cttctccgcg gtcttcgcgg tgtggcgttt tcggaccttc ctggcctttg
     1381 tgcccttccc ggccttcttc gacttcgcct tgatcgtcgg ttcccccttc ccggccgtgc
     1441 gggaagcccg ggtccacttc ttgctcccgc gcgccttcgc gtaaacgggc ggcatcgacg
     1501 aggggtatcc gaagtaggtg ttgaacgctt ccttccccac gtagcttccc ttgatcttcc
     1561 accggccgtc
//
LOCUS       DATGYW010000427         1691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_306722, whole genome shotgun sequence.
ACCESSION   DATGYW010000427 DATGYW010000000
VERSION     DATGYW010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306722"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..520)
                     /locus_tag="VK429_05975"
     CDS             complement(<1..520)
                     /locus_tag="VK429_05975"
                     /inference="COORDINATES: protein motif:HMM:NF015566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HLN91392.1"
                     /translation="MAWRFLLAVLLGGVCYLDRTAACQLMLHRPLVVATLMGAVFGNM
                     AAGTQVGVVLELIYLARLPVGASIPPDDTGAAVFGGSAAAVASSSIGLDAGSFTALLL
                     LSVFVAEAGKAVDRFVRKVNVRIARITAESVDRGDLQAVEHGLLAGITLFMVTGMVLA
                     LVFSGVGVAVSKE"
     gene            complement(523..999)
                     /locus_tag="VK429_05980"
     CDS             complement(523..999)
                     /locus_tag="VK429_05980"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF015769.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HLN91393.1"
                     /translation="MPLVLARIDCRLIHGQVVETWVPHTSADSLIVANDDLAGNPFLR
                     SVMELAVPPAIRVRFCRLDEAIRVLAEADRNGERTILLVASTGDAVTLRKAGAGFSVL
                     NIGNLHFAAGKVEISPSVFFAPEDFDALEWFRSHGVTVLVQGTPFEAGTSFDAERE"
     gene            complement(1004..1426)
                     /locus_tag="VK429_05985"
     CDS             complement(1004..1426)
                     /locus_tag="VK429_05985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011939808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter"
                     /protein_id="HLN91394.1"
                     /translation="MIGAVVVSHGAFATELVRAAGIIVGKIEGVVAVDISPEMSVEAI
                     HDAVEGAVRTVEDGDGVLLLTDMFGGTPSNIGLSFLGTHHVVVLTGVNLPMMVKFPIA
                     REGMPLEELARQLQECGHRSIMIPGDMLKKKAEKKPEK"
     gene            complement(1423..>1691)
                     /locus_tag="VK429_05990"
     CDS             complement(1423..>1691)
                     /locus_tag="VK429_05990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015861252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HLN91395.1"
                     /translation="RGVREYVLGARATRGFLRRLSDLLLFLLPLYRKEGKAYFTLGVG
                     CTGGRHRSVAVAEALGEILGKGRESAVVVHRDLSRSSLPAKGMR"
BASE COUNT          313 a          596 c          534 g          248 t
ORIGIN      
        1 gctccttcga caccgccacg cccacccccg agaagacgag cgccaggacc atcccggtca
       61 ccatgaacag ggtgattccg gcgagcagcc cgtgctccac cgcctggaga tccccacggt
      121 ccaccgactc cgccgtgatg cgggcgatcc gcacgttgac cttccggacg aagcggtcga
      181 ccgcttttcc ggcttccgcg acgaagacgg agaggagaag gagggcggtg aaactgcccg
      241 cgtcaagccc gatggaagag gaggcgacgg cggcggccga gccgccgaac acggctgcgc
      301 ccgtgtcgtc gggagggatc gacgcaccga cgggaagcct ggccaggtag atcagttcga
      361 ggacgacccc cacctgggtc ccggcggcca tattcccgaa gaccgccccc atcagcgtgg
      421 cgacgacgag agggcggtgg agcatcagtt gacacgcggc cgtccggtcg aggtagcaca
      481 ccccgccgag aaggaccgcc aggaggaacc gccaggccac ccctattccc tttccgcgtc
      541 gaacgacgtt cccgcctcga acggcgtccc ctgaacgagg accgtaaccc cgtgcgaacg
      601 gaaccattca agagcgtcga aatcctccgg ggcgaagaag acggacgggg aaatctcgac
      661 tttccccgcg gcgaagtgga gattgccgat attcaagacg ctgaacccgg cccccgcctt
      721 gcggagcgtc accgcgtccc ctgtgctcgc gacaagcagg atggtgcgct ccccgttccg
      781 gtcggcctcg gcgaggacgc gaatcgcctc gtcgagacga cagaagcgga cgcggatcgc
      841 cgggggaacc gccagctcca tcacggagcg caggaacggg ttcccggcca ggtcgtcgtt
      901 ggcgacgatc agtgaatcgg cggacgtgtg gggcacccac gtctccacca cctgcccgtg
      961 gatcagccgg cagtcgatgc gggcgagcac caggggcatc ccgctacttc tccggcttct
     1021 tttcggcctt cttcttcagc atgtcccccg gaatcatgat gctgcgatgg ccgcactcct
     1081 ggagctggcg cgcgagttct tccagcggca tgccttcccg ggcgatgggg aacttgacca
     1141 tcatcggcag gttcaccccc gtcaggacta ccacgtggtg cgtgccgagg aacgacaggc
     1201 cgatgttgga gggcgtcccg ccgaacatgt ccgtgagaag cagcacgccg tccccgtcct
     1261 cgaccgtgcg gacggcccct tccaccgcgt cgtggatcgc ctcgacgctc atttcggggg
     1321 agatatcgac cgcgacgacc ccctcgatct ttccgacgat gatcccggcg gcgcgcacca
     1381 gctccgtggc gaaagctccg tgggaaacga caaccgctcc gatcatctca tccccttggc
     1441 aggcagggag gagcgcgaca ggtcgcggtg gaccacgacc gccgactccc tccccttccc
     1501 gagtatttcc ccgagcgcct ccgcgaccgc gacggaccga tgcctgccgc cggtacagcc
     1561 gacgcccagc gtgaagtacg ccttcccttc ctttctatag aggggaagga ggaaaagcaa
     1621 cagatccgac aggcggcgca ggaaccctct cgtcgcgcgg gctcccagga catattcgcg
     1681 gactccccgg t
//
LOCUS       DATGYW010000428         3516 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_248102, whole genome shotgun sequence.
ACCESSION   DATGYW010000428 DATGYW010000000
VERSION     DATGYW010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3516
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248102"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..828
                     /locus_tag="VK429_05995"
     CDS             <1..828
                     /locus_tag="VK429_05995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011937165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HLN91396.1"
                     /translation="PVGVRSFEDLHLPKVMEKISLEERGLILCTGTTGCGKSTTLAAM
                     VQYINTHRSCHVMTIEDPIEFLLRDGKSIINQRELGVDTSSFADALKSALRQDPDVIL
                     VGEMRDLETIETAIVAAETGHLVLSTLHTMDASETINRIVATFPPFQQKQIRLQLASV
                     LKAVISQRLLPRADGQGRVPAAEILLNTARVREYIEDKDKTRKIREAIAQGFVSYGMQ
                     TFDQSLLTLLKEGLVTLEEALRQASNPDDFALRVRGVSSTSDLTWDDFEKGGPPQPS"
     gene            896..1315
                     /locus_tag="VK429_06000"
     CDS             896..1315
                     /locus_tag="VK429_06000"
                     /inference="COORDINATES: protein motif:HMM:NF014668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HLN91397.1"
                     /translation="MSEGEVALRLARKGVAGGGIPAILSRLRELGLLEDAALCRRLAR
                     SYQEERRYGPAKIAWKLASRRFSRDLVEEALREVASPGAVAEAAAIALRKKFREGIPT
                     GRDGAAKAYRFLAGRGFPPDACRAALGRRTTEIPQGD"
     gene            1319..>3516
                     /gene="alaS"
                     /locus_tag="VK429_06005"
     CDS             1319..>3516
                     /gene="alaS"
                     /locus_tag="VK429_06005"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HLN91398.1"
                     /translation="MSMTGAQLRSAFLEYFGKNGHKILPSASLVPGNDPTLLFTNAGM
                     VQFKEYFLGLSTADWKRATTAQRCLRVSGKHNDLENVGYTARHHTLFEMLGNFSFGDY
                     FKKEAIFFGWDFLTREVGLDGTRMTVSVFREDDEAYDLWHKTMGIPASRVVRFDEKDN
                     FWSMGATGPCGPCSEILFDQGEGVGCGRPGCAVGCDCDRFLEIWNLVFMQFNQDESGT
                     RTTLPKPSIDTGMGLERLAAVVQGVTSNYDTDLFRPVLDGISRQCGVTVGKSPALDAA
                     MRVVADHARATAFLIADGIVPSNEGRGYVLRRIMRRALRHGKKLGFDGPFLHRVAGIV
                     VEEFQEAYPGLAQSASFVDTVAFQEERRFLETLDAGLRMVEEEFSRMAGGGKVFPGEV
                     AFKLYDTYGFPADLTADLCRERGVALDSAGFEKEMERQRAQSRVSWKGSEIGAQDAVA
                     GELSRAGISVDFVGYERMESDARVVAVFRQGERVASAAEGQEAELVTDVTPFYGESGG
                     QAGDTGDALGDGFALRVQDTRRVSADQIIHRVKVLSGTLREGQKARLRVDEASRRLTQ
                     GNHTATHLLQAALRKVLGTHVKQAGSYVGPDKLRFDFSHFEALSPETLSVVEEEVNRV
                     IFSPRPVTWESLPYEQAVAAGAMAFFGEKYADIVRMVTVPEVSRELCGGTHVRDTAEI
                     GLFRILSEGAVAAGVRRIEAVTGLPAWRFLREEAGALHGVARELKVAAPEV"
BASE COUNT          564 a         1132 c         1262 g          558 t
ORIGIN      
        1 cccgtcgggg tgaggtcctt cgaggatctc cacctcccca aggtgatgga aaagatctcc
       61 ctggaggagc gggggctgat cctctgcacc gggacgaccg ggtgcggcaa gtccaccacc
      121 cttgcggcga tggtccagta catcaacacc catcgcagtt gccacgtcat gacgatcgag
      181 gatccgatcg agttcctgtt gcgggacggc aagagcatca tcaaccagcg ggagctcggg
      241 gtggacacat cgtcgttcgc ggacgccctg aagagcgctc tccggcagga tcccgacgtc
      301 atccttgtgg gggagatgcg ggacctcgag acgatcgaga cggcgatcgt cgccgcggag
      361 acggggcacc tcgtcctgtc gacgcttcac accatggacg cctcggaaac aatcaaccgg
      421 atcgtggcga cgtttccccc gttccagcag aagcagattc gcctgcagct ggcgtctgtc
      481 ctgaaggcgg tcatttcgca gcggctgctt ccccgcgcgg acggccaggg gcgcgttccc
      541 gccgcggaga ttctgctgaa caccgcccgg gtgcgggaat acatcgagga caaggacaag
      601 acccgcaaga tccgcgaggc gatcgcgcag gggttcgtga gctacgggat gcagaccttc
      661 gaccagtccc tcctgaccct cctaaaggag gggctcgtca ccctcgaaga ggccctccgg
      721 caggccagca atcccgacga cttcgccttg cgggtccgtg gggtctcctc gacctcggac
      781 ctcacgtggg acgattttga aaagggcggt cccccgcagc cgtcgtaggg gagacgccgg
      841 ccggcccccg ggcgcgggaa tcgagctcgc catcgggatg ttggcgcggc gccccttgag
      901 cgagggagaa gtcgccctgc ggctcgcgcg aaagggggtc gccggtggcg ggatccccgc
      961 gattctctca cgcctgcggg agctgggcct gctcgaggac gccgcgttgt gccgccggtt
     1021 ggcgcgttcg taccaggaag agcggcgcta cggtcccgcg aagatcgcgt ggaaactcgc
     1081 gtcgcgccga ttctcccggg acctcgtgga ggaggcgctc cgggaggttg cctcccccgg
     1141 ggcggtggcc gaggccgccg cgatcgcgct tcggaagaaa ttccgggaag ggattcccac
     1201 ggggcgcgat ggggccgcga aggcgtaccg gtttctggcc gggcgcggct ttccgcccga
     1261 cgcctgccgg gcggccctcg gccggcgtac gaccgaaatt ccccaaggag actgatccat
     1321 gtccatgacg ggtgcgcagc tccgctccgc cttcctcgaa tatttcggaa agaacgggca
     1381 caagatcctg cccagcgcct ccctcgtccc cggaaacgat ccgacgctgc tgttcacgaa
     1441 cgccgggatg gtgcagttca aggagtattt cctcgggctg tcgacggccg actggaagcg
     1501 tgcgaccacg gcgcaacggt gcctgcgggt gagcggcaag cacaacgacc tcgagaacgt
     1561 gggctacacg gcgcggcacc acacgctctt cgagatgctt gggaacttct ccttcggcga
     1621 ctacttcaag aaggaggcga tcttcttcgg ttgggacttc ctcacccgcg aggtcggcct
     1681 cgacggcacg cggatgaccg tctccgtctt ccgggaggat gacgaggcgt acgacctctg
     1741 gcacaagacg atggggattc ccgcctcgag ggtcgtccgg ttcgacgaga aggacaactt
     1801 ctggtcgatg ggcgccacgg ggccgtgcgg cccctgctcc gaaatcctct tcgatcaggg
     1861 agagggagtg gggtgcggcc gtcccgggtg cgcggtgggg tgcgactgcg accggtttct
     1921 cgagatatgg aacctcgtgt tcatgcagtt caaccaggac gagtcgggta cgcggactac
     1981 gctgccgaag ccgagcatcg acaccggaat ggggctcgag cggcttgccg ccgtggtgca
     2041 gggggtgacc agcaactacg acacggacct gttccgcccg gtcctcgacg ggatatcccg
     2101 gcaatgcggg gtgaccgtcg gcaagtcccc ggccctcgac gcggcgatgc gggtcgtcgc
     2161 cgaccacgcg cgggccaccg ccttcctcat cgccgacggg atcgtcccct ccaacgaggg
     2221 gcgcgggtac gtgctccgcc ggatcatgcg ccgggcgctg cgccacggga agaaactcgg
     2281 gttcgacggc cccttcctcc accgggtcgc ggggatcgtg gtcgaggagt tccaggaggc
     2341 gtacccgggc ctcgcccaga gcgcgtcgtt cgtcgacacg gtggcgttcc aggaggagcg
     2401 gcgattcctc gagacgctcg acgcgggcct gcggatggtc gaggaggagt tctcccgcat
     2461 ggccgggggc ggcaaggtct tccccggcga ggtcgccttc aagctctacg acacgtacgg
     2521 attcccggcg gacctcaccg cggacctgtg ccgggagcgc ggggtcgccc tcgattcggc
     2581 ggggttcgag aaggagatgg agagacagcg cgcccagtcc agggtctcct ggaaaggcag
     2641 cgagatcggc gcgcaggatg ccgtggccgg cgaactctcc cgggcgggga tctccgtcga
     2701 cttcgtcggg tacgagcgga tggaatcgga cgcacgcgtc gtcgcggtct tccgccaggg
     2761 ggagcgggtc gcctccgcgg cggagggcca ggaggcggaa ctggtcaccg acgtgacgcc
     2821 cttctacggg gagtccggcg gccaggcggg ggacaccggg gacgccctgg gggacggctt
     2881 cgccctccgg gtgcaggaca ctcgcagggt gtccgccgac cagatcatcc accgggtcaa
     2941 ggtcctttca ggaacgctcc gggaggggca gaaggcacgg cttcgtgtgg acgaggcgtc
     3001 ccggcggctc acacagggga accacacggc gacgcacctt ctccaggcgg cgctgcggaa
     3061 ggtcctgggc acccacgtga aacaggccgg ttcgtacgtc gggcccgaca agctccggtt
     3121 cgatttttcc cacttcgagg cgctttcccc cgaaacgctt tccgtggtcg aggaggaggt
     3181 gaaccgggtc atcttctcgc cgaggcccgt cacgtgggag tccctcccgt acgaacaggc
     3241 ggtggcggcg ggcgcgatgg cttttttcgg ggagaagtac gccgacatcg tccggatggt
     3301 gaccgtcccg gaggtgagcc gggagctgtg cggcgggacg cacgtgcggg acaccgccga
     3361 gatcggtctc ttccgcatcc tctcggaggg tgcggtggcg gcaggggtcc ggcgcatcga
     3421 ggcggtcacg gggctgcccg cctggcgttt cctccgggag gaggccggcg cgcttcacgg
     3481 cgtggcccgg gagttgaagg tggcggcccc cgaggt
//
LOCUS       DATGYW010000429         1869 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_466684, whole genome shotgun sequence.
ACCESSION   DATGYW010000429 DATGYW010000000
VERSION     DATGYW010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_466684"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..923)
                     /locus_tag="VK429_06010"
     CDS             complement(<1..923)
                     /locus_tag="VK429_06010"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HLN91399.1"
                     /translation="MMKRKLAAILSASAEGYRRLLGEDEAGTLQTLKDHRQAMSSLVE
                     KHQGHVVDSPGGSLLAEFASVVDALECAVGIQKDLKGRNEALPKERSMPFRIGIHLGD
                     IIEEEGKIYGDGVNVAALLDSLADGGGICVSRSAHDQVKNKLDVGYQDLGQRGVENIS
                     ESVRVYRVVLERDPKWKMIGKIWSRMKQWQKVALTIGIALLQVGGGLVVKKYFDRPPS
                     PPVATASVQKVALPLPDKPSIAVLPFENMTGDPKQEYFTDGFTEQIITSLSKIQALFV
                     ISRNSTFTYKGKPVKVQQVSEELGVRYVLEG"
     gene            complement(1048..1182)
                     /locus_tag="VK429_06015"
     CDS             complement(1048..1182)
                     /locus_tag="VK429_06015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91400.1"
                     /translation="MPMVVIREEMETDAPAIRRLNEEAFGQPTEGGVIRYREDFNEAI
                     "
     gene            complement(1202..>1869)
                     /locus_tag="VK429_06020"
     CDS             complement(1202..>1869)
                     /locus_tag="VK429_06020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91401.1"
                     /translation="AAVGVAVLSDRWGSGAVRATSYLLQIYSVVSLALGFLVHGLPAS
                     LLAGTVPSAALAAAALGHYRWARRHSPPAHSPFFETYDTEDLSGAVTLLAALTGSFFL
                     LRAIAWWILLPVGPGGPEAFQCTQSIIINLAALGLGLYSFRTRNREIRNVAILVIAVG
                     AVKTASDLLGAKGVPLVLSVLSFGLAAATQSITLSRWHRVPQMPGPESREPDKESASS
                     LGG"
BASE COUNT          338 a          594 c          577 g          360 t
ORIGIN      
        1 ctcccttcca gcacgtatcg gacgccaagc tcctcgctca cttgctgtac cttcactggc
       61 ttgcctttat aggtgaacgt cgagttccgt gagatgacga acagcgcctg gattttcgac
      121 agggacgtga tgatctgttc cgtgaacccg tccgtgaaat actcctgctt ggggtcgccc
      181 gtcatgtttt cgaacggaag cacggcgatg gaaggcttgt cgggaagcgg gagcgccacc
      241 ttctgtacgg aagcggtcgc aaccggcggc gacgggggcc ggtcgaaata tttcttgacc
      301 accaggcccc ctcccacctg cagaagcgca atcccgatcg tcaaggccac cttctgccat
      361 tgcttcatcc gggaccagat tttgccgatc attttccact tcggatcacg ctccagaacg
      421 acgcgataca cccgaacgga ttcagagatg ttttcgacgc cacgctgtcc caggtcctga
      481 taccccacgt ccagcttgtt cttcacctgg tcatgggcgc tccgggaaac gcagatgcct
      541 cccccatccg ccaaactgtc caacagggcg gcgacgttga cgccatcgcc atagatcttt
      601 ccttcttcct cgatgatatc tccaaggtgg atcccgatcc ggaagggcat actgcgctct
      661 ttcggcagcg cttcgttccg gcctttcaga tccttctgga tccccaccgc gcactccagg
      721 gcgtccacca cgctcgcgaa ctcggcgagc aggctgcccc ctggagagtc cacgacgtgg
      781 ccctggtgtt tctccacgag agaagacatc gcctggcggt ggtccttgag ggtttggaga
      841 gtcccggcct catcctcccc caggaggcgt ctgtatccct cggcgctcgc gctcaagatc
      901 gcggcgagct tccgcttcat catcggaggc ttgggggaag aaggtcgaga accaacatca
      961 ttcctcctct aaagccaaga cggttctggg atcttctcga agtttgaatc cgcacggggt
     1021 tcccaacccg cccgctgcga cttcccgtca gatcgcctcg ttgaaatctt cccggtaacg
     1081 gatgactcct ccctccgtag gctggccgaa cgcttcctcg ttcaggcggc gaattgccgg
     1141 cgcatccgtt tccatctctt cgcggatcac gaccatcggc accttcacgt ttcgtatctt
     1201 tttatccgcc cagggaggag gctgattcct tgtccggctc gcggctctcc gggccaggca
     1261 tctggggaac cctgtgccac cggctcagag tgattgactg ggtcgcggcg gcgaggccga
     1321 aggagaggac gcttaacacc agcggaacgc ccttggcgcc aagcaggtcg gaggcggtct
     1381 ttaccgctcc caccgcgatg accaggatgg ccacgtttcg gatctcccgg ttgcgggtgc
     1441 ggaaggaata gaggccgagt ccgagggcgg ccaggttgat gatgatcgac tgggtgcact
     1501 ggaaagcttc cggccctcca ggcccgacgg gaaggagaat ccaccaggcg atcgctcgaa
     1561 ggaggaagaa ggaaccggtc agggcggcca ggagggtgac ggcgccgctc aggtcctccg
     1621 tgtcgtatgt ctcgaagaag ggggagtggg cgggcgggct gtgccgtcgg gcccaccggt
     1681 aatggcccag ggcggccgcg gccagcgcgg cgctggggac cgttccggcg aggagggatg
     1741 cggggagacc gtgaaccagg aaaccgagcg ccagggaaac gacgctgtag atctggagca
     1801 ggtaggaggt tgcccggacg gcgccgctcc cccatcggtc ggagaggacg gccacgccca
     1861 cggccgcgg
//
LOCUS       DATGYW010000430         2353 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_81786, whole genome shotgun sequence.
ACCESSION   DATGYW010000430 DATGYW010000000
VERSION     DATGYW010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2353
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81786"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..368
                     /locus_tag="VK429_06025"
     CDS             165..368
                     /locus_tag="VK429_06025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014259633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HLN91402.1"
                     /translation="MPFVNIKITRDGVTPEKKAEVIRGVTKLLVDVLGKNPQTTMVLI
                     EEVETDNWGVAGETVTVRRKQGK"
     gene            complement(436..2058)
                     /locus_tag="VK429_06030"
     CDS             complement(436..2058)
                     /locus_tag="VK429_06030"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011699186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HLN91403.1"
                     /translation="MPKFSYQDPFPLGKDHAKYRLLTKEHVSVAKFGGKEMLKIDPEG
                     LALLANQAMRDVSFLLRPSHNEKVAAILSDPEASPNDRGVAVALLRNAEVAANFVLPF
                     CQDTGTATIVGKKGQQVWTGARDEEYLSKGVHKTYTEENLRYSQTIPLDMYEEINSGT
                     NLPAQIDLYATEGMEYKFLFVAKGGGSANKTYLFQETKALLNPAALEKFLVEKMKTLG
                     TAACPPYHLAFVVGGTSAEAALKTVKLASTGYLDTLPTKGNKGGQAFRDLEMEGRLLA
                     AARKSGYGAQFGGKHFAHDVRVVRLPRHGASCPVAMGVSCSADRNVKAKITRDGIWLE
                     ELDRNPGRLIPAKYRGKHEHGVVKVNLNRPMKEILAELSKYPVTTQLSLTGTIIVGRD
                     IAHAKLKERIDKGEGLPQYVKDHPIYYAGPAKTPKGMPSGSFGPTTAGRMDSYVDLLQ
                     SHGGSLIMIAKGNRSKAVTDACKKHGGFYLGSIGGPAALLAQENIRKVEVLEYPELGM
                     EAIWKIEVEDFPAFILVDDKGNDFFQQIACGG"
BASE COUNT          407 a          706 c          798 g          442 t
ORIGIN      
        1 gtatgacggg tggaggtatg acgggtggag gtatgatgac ctcgacgttc cacgggatca
       61 tgaacgaggc aaaaaatgtg atgatatccg catacaccac cgacggtggc ggcgggtatc
      121 cattctcgat tcaaatgaag taaacgtact aggaggtgtc ccggatgccc ttcgtgaaca
      181 tcaagatcac ccgcgacggc gtgacgccgg agaagaaggc cgaggtgatc cgcggggtga
      241 cgaaactcct cgtggatgtg ctcggaaaaa acccgcagac cacgatggtg ctgatcgaag
      301 aggtggaaac ggataactgg ggggtcgccg gggagacggt caccgtccgc cggaaacaag
      361 ggaagtgaaa ggaagaggcc gggcgggaaa cgatccccgt ccggcctctt cggttttccg
      421 ttatacgcgc cgcgatcagc cgccgcaggc gatctgctgg aagaagtcgt tccccttgtc
      481 gtctaccagg atgaacgcgg ggaaatcctc gacctcgatc ttccagatcg cctccatccc
      541 aagttcgggg tattcaagca cctcgacctt ccggatgttc tcctgcgcga gcagcgccgc
      601 cgggcccccg atcgacccga ggtagaaccc gccgtgtttt ttgcacgcgt cggtcaccgc
      661 cttgctccgg ttccccttcg cgatcatgat cagcgatccc ccgtgggact ggagaagatc
      721 gacgtacgag tccatcctcc ccgcggtggt cgggccgaag gagccggacg gcatcccctt
      781 cggggtcttg gcggggccgg cgtagtagat cgggtggtcc ttgacgtatt gcggcagccc
      841 ctcgcccttg tcgatccgct ccttcagctt cgcgtgggcg atgtcgcggc cgacgatgat
      901 cgtcccggtg agggagagct gcgtggtgac cgggtatttc gacagctccg caaggatctc
      961 cttcatcggc cggttcaggt tgaccttcac gacgccgtgc tcgtgctttc cgcgatactt
     1021 cgccgggatg aggcggcccg ggttccggtc gagctcctcg agccagatcc cgtcccgggt
     1081 gatcttcgcc ttcacgttcc ggtcggccga gcaggagacg cccatcgcga ccgggcacga
     1141 cgcgccgtgg cgcggcagcc ggacgacccg gacatcgtgc gcgaaatgct tcccgccgaa
     1201 ctgcgctcca tagccggact tgcgcgcggc ggcgaggagc ctcccctcca tctcgaggtc
     1261 ccggaacgcc tggcccccct tgttcccctt cgtcggaagc gtgtcgaggt agccggtgga
     1321 ggcgagcttc acggttttga gagccgcctc ggccgacgtc ccgccgacga cgaacgcgag
     1381 gtggtacggc gggcacgcgg cggtcccgag cgtcttcatt ttctcgacga ggaacttctc
     1441 gagcgcggcg gggttgagga gcgccttggt ctcctggaag aggtacgtct tgttcgcgga
     1501 accgccgccc ttggcgacga agaggaattt gtactccatc ccttccgtgg catagaggtc
     1561 gatctgggcg ggaagattcg tccccgagtt gatctcttcg tacatgtcga gggggatcgt
     1621 ctgggagtac cggagattct cctccgtgta cgtcttgtgg acccctttgg agaggtactc
     1681 ctcgtcgcgg gcgccggtcc acacctgctg ccccttcttc ccgacgatcg tcgcggtccc
     1741 cgtgtcctgg cagaacggga ggacgaagtt ggcggccacc tcggcgttgc gcagcagcgc
     1801 gaccgccacc ccgcggtcgt tgggggacgc ctcggggtcg gacaagatcg cagcgacctt
     1861 ctcgttatgg gaggggcgca ggaggaagga gacgtcccgc atcgcctggt tcgccaggag
     1921 cgcaagcccc tccgggtcga tcttcagcat ctccttcccg ccgaacttcg cgaccgagac
     1981 gtgctctttg gtcaggaggc ggtacttggc gtggtccttc cccagcggga acgggtcctg
     2041 gtacgagaat ttcggcatcg gttcgctcct tctgaaggtg gggtgggggg tggaaatcag
     2101 cccaaacgat agccccgcgg gagggaaacg tcaaggatgt ctacagctgc cgggatcgag
     2161 ggatatggat agagaagggg ccgggttgcc ccgttatcct cctcggtgag aaaatggacc
     2221 catggcggag ccggggcgag aggacatctg gtgggtgtac atgatctcgt gccggggggg
     2281 gaggatctac accgggacgg cgaaggaccc ggaatcgcga ttccgggcgc atcgtgacgg
     2341 gaagggtgcg gcg
//
LOCUS       DATGYW010000431         1924 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_185328, whole genome shotgun sequence.
ACCESSION   DATGYW010000431 DATGYW010000000
VERSION     DATGYW010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185328"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..516
                     /locus_tag="VK429_06035"
     CDS             169..516
                     /locus_tag="VK429_06035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011939735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HLN91404.1"
                     /translation="MDERNDGVVTGAMLVLVGAILGAGAALLFAPQSGRKTRRDISRY
                     ARKTGKMVEGIAGEVVGSVAGMADAVEEKAEEYLEKGKDLSKESLDAVLAALNEGQER
                     LGRQRDRLAKLLG"
     gene            563..1780
                     /gene="rpsA"
                     /locus_tag="VK429_06040"
     CDS             563..1780
                     /gene="rpsA"
                     /locus_tag="VK429_06040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HLN91405.1"
                     /translation="MEPDEEKTGTPGEPEEESFGEMFDRSFVAPTRYEPGKKVSARVV
                     KVTPEWVFLDLGRKGEGVLAAKELLDEAGTVAVKEGDTLEAYFVSSDGSEMLFTTRVA
                     GGAAGSAQLEDASNSGIPVDGVVVKEIKGGYEVRLAGGARAFCPHSQMDLPRSGGQEE
                     HVGKHAAFRITKYGEKGRNIVVSRRALLEEEEERKSRELMATLTEGMVMRGTVTAVRE
                     FGAFVSVGPIEGLLPISEIGYERVEDIQSVLSVGQEVEVAITRLDWANKRFSFSLKKT
                     LADPWETAVDRFPAGSRHVGKVARLAAFGAFVSLGGGVDGLLHISKLGGGKRIRSAGE
                     VLRAGQEIEVKVDSVDPVKRRVALSLPGTESAETPEEEAEDYSKYMEPAPPPPPLGSL
                     GEALKAKLERKTK"
BASE COUNT          361 a          526 c          746 g          291 t
ORIGIN      
        1 gggggccgaa cgcccggacg cggatcgctt tcattgggat tacctcctga taattagatc
       61 tttttaaaca atgggatgcc cgccgctctc ccgctgtttc gccgggcgtc tacggggtac
      121 actactatca gagaccaggg aaccgagaaa cgaaaccgga ggtggcccat ggacgagagg
      181 aacgacggtg tggtgacggg agcgatgctg gtgctggtgg gtgcgattct cggggccggc
      241 gcagccttgc tgttcgcgcc ccaatcggga cggaaaacgc gcagggacat ctcccggtac
      301 gcccggaaga cgggcaagat ggtggagggc atcgcggggg aggtcgtcgg gagcgtggcc
      361 gggatggccg acgccgtgga ggagaaggcg gaggaatacc tcgagaaggg gaaggatctc
      421 tccaaggagt cgctggacgc agtgctcgcc gccctgaacg agggacagga gcgtctggga
      481 cggcaacggg accggctggc gaaattgctg gggtagcgtc aaggggcgga ggcggcggga
      541 aaaaacagga cgggggaaac gcgtggagcc ggacgaggag aagacgggaa cgccggggga
      601 accggaagag gagagtttcg gggagatgtt cgacaggagc ttcgtcgccc cgacgcggta
      661 cgagcccggg aagaaggtat ccgcccgggt cgtcaaggtg accccggagt gggtgttcct
      721 cgacctggga cggaagggag agggcgtcct cgcggcgaag gagctgctgg acgaggcggg
      781 gaccgtcgcg gtcaaggagg gggacaccct cgaggcgtac ttcgtctcct cggacggcag
      841 cgagatgctc ttcaccaccc gtgtcgccgg gggggcggcc gggtcggcgc agctcgagga
      901 cgcctcgaac tcggggatcc ctgtggacgg ggtcgtggtg aaggagatca agggggggta
      961 cgaagtccgc ctcgcgggcg gggcgagggc gttctgtccg cactcgcaga tggaccttcc
     1021 tcgttccggg gggcaggagg agcacgtggg gaagcacgcc gcgttccgga tcacgaagta
     1081 cggggagaag gggcgcaaca tcgtcgtctc ccgccgggcc ttgctggaag aggaggagga
     1141 gcggaaatcc cgggagctga tggcgacgct cacggagggg atggtgatga gggggaccgt
     1201 caccgcggta cgggagttcg gcgccttcgt ctccgtcggt ccgatcgagg ggctgctccc
     1261 catttcggag atcgggtatg aaagggtgga ggatatccag agcgttctct ccgtgggaca
     1321 ggaggtcgag gtcgcgatca cgcgcctcga ctgggcgaac aaacgcttct ccttcagcct
     1381 caagaagacc ctcgcggacc cgtgggaaac cgccgtcgac cgtttccccg cgggatcccg
     1441 ccacgtcggc aaagtcgcgc gcctcgccgc cttcggggcc ttcgtctccc tcggcggggg
     1501 ggtggacggc ctgctccaca tatcgaagct cgggggggga aagcggatcc ggagcgcggg
     1561 ggaggttctc cgcgcggggc aggagatcga ggtgaaggtc gactcggtcg accccgtgaa
     1621 gcgtcgcgtc gcgctctccc ttccggggac ggagagcgcg gagacgcctg aagaagaagc
     1681 ggaagattac tcgaagtata tggagccggc gccccctccc cctccgctcg gctccctggg
     1741 ggaagccctc aaggcgaaac tcgagcggaa aacgaagtaa gcggagtcgc atcggagcgg
     1801 gatacccttt ccgggtgggc gtgtgttatt tccgggctac aggttgatga gttcgaggaa
     1861 gtacggcatc tggcggcgcc accacggcca gtcgtggttg acgtcatgtc cccagaagtc
     1921 gatc
//
LOCUS       DATGYW010000432         2630 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_413192, whole genome shotgun sequence.
ACCESSION   DATGYW010000432 DATGYW010000000
VERSION     DATGYW010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2630)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2630)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2630
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413192"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..1963)
                     /locus_tag="VK429_06045"
     CDS             complement(8..1963)
                     /locus_tag="VK429_06045"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003511688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase"
                     /protein_id="HLN91406.1"
                     /translation="MGKNIVQKIIDAHYVSGDKKAGKEVAVRIDQTLTQDATGTMAYL
                     QFEAMGVPRVKTEKSVSYVDHNTLQEGFENADDHLYLQTVAAKHGVFYSRAGNGICHQ
                     VHVERFGAPGKTMLGSDSHTPTGGGIGMMAIGAGGLDVAVAMAGGPFYMTYPKVVKVN
                     LTGKLQPWVAAKDVILKLLEILTTKGNVGSIVEYGGDGVETLSVPERATITNMGAELG
                     VTTSIFPSDKLTKAFLKAQGREEAWVKLKADPSAKYEKVIDIDLSTLEPMVAMPHSPD
                     NVKRVKEIAGKKVHQVLVGSCTNASYKDVTTLARILDGRTISTNVSFGVAPGSRQVLQ
                     MAAKESSIATLVSAGARILETACGFCIGAGQAPPSGGVSVRTNNRNFEGRSGTKDAGI
                     FLVSAETAAACALKGEMADPRDVAAELGIAYPEVKVPKKFHIDDSMVLPPAAEGATVE
                     VRRGPNIGKPPESAPLPEAIRGAVTLKVGDKITTDHIMPAGARLKYRSNIAKYAEFVF
                     EGVDPTFSRRSLENKAKGVHNVIVGGLSYGQGSSREHAAICPSFLGVQVVITKSFERI
                     HSANLINFGIVPFLFANEADYDKIAQGDQVEIPNVREAIRKGTKLKARNVTKGFDFEV
                     THSLTGRQIDIILAGGRLAYTKEKGLF"
BASE COUNT          439 a          855 c          814 g          522 t
ORIGIN      
        1 acggccgtca gaacaatccc ttttccttcg tgtacgcgag gcgtccgccg gccaggatga
       61 tgtcgatctg ccgcccggtc agggagtggg tgacctcgaa gtcgaacccc ttcgtgacgt
      121 tgcgcgcctt gagcttcgtc cctttccgga tcgcctcccg cacgttcggg atctcgacct
      181 ggtcgccctg ggcgatcttg tcgtagtcgg cctcgttcgc gaagaggaac ggcacgatcc
      241 cgaagttgat caggttcgcg gagtggatcc gctcgaacga cttggtgatg accacctgga
      301 cgccgaggaa gctcgggcag atcgccgcgt gctcgcgcga ggagccctgc ccgtaggaga
      361 gcccgccgac aatcacgttg tggaccccct tcgccttgtt ctccagcgac cgcctgctga
      421 acgtcgggtc gacgccctcg aagacgaact cggcgtattt cgcgatgttg gagcggtatt
      481 tcagccgcgc cccggcgggc atgatgtggt ccgtggtgat cttgtcgccc actttcagcg
      541 tgaccgcgcc gcggatcgcc tcgggcaggg gggcgctctc cggcggcttc ccgatgttcg
      601 gcccgcgccg gacctcgacc gttgcgcctt ccgccgcggg ggggaggacc atcgagtcgt
      661 cgatgtggaa cttcttcggc accttcacct cggggtacgc gatcccgagc tccgccgcga
      721 cgtccctcgg gtcggccatc tcacccttga gggcgcacgc cgccgccgtc tcggcggaga
      781 cgaggaagat cccggcgtcc ttcgtccccg accggccctc gaagttccgg ttgttcgtgc
      841 ggaccgagac gccgcccgac gggggggcct gccccgcgcc gatgcagaag ccgcaggcgg
      901 tctcgaggat tcgggccccc gcgctcacca gcgtcgcgat gctgctctcc ttcgccgcca
      961 tctggagcac ctggcgggag cccggcgcga ccccgaacga cacgttggta ctgatcgtcc
     1021 ggccgtcgag gatcctcgcg agcgtggtga cgtccttgta ggaggcgttc gtgcaggagc
     1081 ccaccagcac ctggtggacc ttcttccccg cgatctcctt cacccgcttg acgttgtccg
     1141 ggctgtgcgg catcgccacc atcggctcga gcgtggacag gtcgatgtcg atcaccttct
     1201 cgtacttcgc ggacgggtcg gccttgagct tcacccacgc ctcctcgcgg ccctgggcct
     1261 tgaggaacgc cttcgtcagc ttgtcggagg ggaagatcga ggtggtcacg ccgagctcgg
     1321 cgcccatgtt cgtgatcgtg gcgcgctcgg ggacggacag cgtctccacg ccgtcgccgc
     1381 cgtattccac gatcgaaccc acgttcccct ttgtcgtcag gatctccagc agcttgagga
     1441 tgacgtcctt ggccgccacc cacggctgga gtttcccggt caggttcacc ttgaccactt
     1501 tcgggtacgt catgtagaag gggccgcccg ccatcgccac ggcgacgtcc agcccgcccg
     1561 cgccgatcgc catcatcccg atcccgccgc ccgtgggggt gtgcgagtcg gagcccagca
     1621 tcgtcttgcc gggggcgccg aaccgctcga cgtggacctg gtggcagatg ccgttcccgg
     1681 cgcgggagta gaagacgccg tgcttcgcgg cgaccgtctg aaggtacagg tggtcgtcgg
     1741 cgttctcgaa cccttcctgc agcgtgttgt gatcgacgta ggaaaccgat ttctcggtct
     1801 tcacccgggg aacccccatc gcctcgaact gcaggtacgc catcgttccg gtcgcgtcct
     1861 gcgtgagggt ctggtcgatc cggacggcga cctcctttcc cgctttcttg tctcccgaca
     1921 cgtaatgcgc gtcgatgatc ttctgcacga tgttctttcc catcaatctt ctcctccctt
     1981 ccgggtgttc ttgccttggc gatcaggaat gatgaacgaa ggtgtcgaca gtatccgacg
     2041 caaaatcgat ccatcatacg caaagccccc cccgatttca accacgggaa gcgccccagg
     2101 tgaaaataaa tacaccccaa tatattctat tgacggataa agttgtattt atatacagtg
     2161 tgtagaaaag ctgtatacag tatacagaaa gcgttatcga tagggcggtt tcttgtcagg
     2221 caaggggcaa ggccccgaac agatacccga aaggtcccca cggcgatttc gggaagcgtg
     2281 ttgaaggggt gatttgatgc cgtcggaaaa gagcgtttcg tcaaggaacc gcaaaatgaa
     2341 aggaggtgca ccaggggaga gagaagaggc tgcggaccaa ggctttttcg tacccaacca
     2401 cgcagagagt ctttcagtca ggagggaacg atgagaaagc tgttaactct gttagccgta
     2461 cttaccctgg cagcaccact aatgctctac ggatgttccg gcgatgacgg atccaccggc
     2521 tcgacgggcg ccgcgggcaa tacgggtcct ccgggtgctc cgggtacccc gggcgccccg
     2581 ggggctcccg gctccgccag catcactgac atgcatggct tggacattgc
//
LOCUS       DATGYW010000433         2409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_81856, whole genome shotgun sequence.
ACCESSION   DATGYW010000433 DATGYW010000000
VERSION     DATGYW010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81856"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1522
                     /locus_tag="VK429_06050"
     CDS             <1..1522
                     /locus_tag="VK429_06050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011419537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HLN91407.1"
                     /translation="CGVCTTVHAIASVRAVENALGLEIPLNAQYIRNLLITAHALGDH
                     IVHFYQLSALDWVDVTSALKADPAKAASIAESLSPWPGNSRMQMETVKNRVSEFVKGG
                     QLGIFANGYWGHPAMKLPPEINLIAVSHYLQALDIQRKANQAVAILGGKTPHIQNLAV
                     GGVANAINLDDPATLNMEKLYMVKELLTEVTAFVQQVYLPDVCVIGAKYAEWLKYGAG
                     VTNYLAVPDLPLDTKGTKFDFPGGTIFDGKLETYKPISSFQDPYFKENVSESIARSYY
                     DGEWQKHPWEEETVPTVGAFNASGKYSWSKSPRFQGRPMQVGPLAQVLMGYAAGHEPT
                     MRWGNRALEMASKAAGAKLGPSHLHSTLGRHLARAVRCAVLGELAMKHWQLLATNIGK
                     GDVSVFNPPAFTRSEQRGFGFHEAPRGTLSHWIVMKGGKIQNYQAVVPSTWNAGPRDG
                     KGQKGPYEASLLGNPVSDPGRPLEVLRTLHSFDPCLACAIHMLKANGEEVTRKNVI"
     gene            1582..1914
                     /locus_tag="VK429_06055"
     CDS             1582..1914
                     /locus_tag="VK429_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014820482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family protein"
                     /protein_id="HLN91408.1"
                     /translation="MRTVVLLCCSNVFMTFAWYGHLKTLPTKPLYIAILVSWGIAFFE
                     YVLMVPANRIGVQSFTVPQLKVMQEVITMVVFAGFAVFYLEAPLKLDYLWAGLCLVGA
                     AYFMFRTI"
     gene            complement(1966..>2409)
                     /locus_tag="VK429_06060"
     CDS             complement(1966..>2409)
                     /locus_tag="VK429_06060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91409.1"
                     /translation="YAGAKTVHADPGSGSGSECCRYEGCGPDCPHRGECPGCPGSGCE
                     SGCPMGTGKAVPPCMQDNAAAAPGGMHRRMHGGGGSMKEGMGRHMEEMRGTIAKLRAL
                     EAKMEALKSKDDAAFRAASLEHAKLLTDLQDSHLKHMEGMMGGGK"
BASE COUNT          413 a          800 c          769 g          427 t
ORIGIN      
        1 ctgcggggtc tgcacgaccg tccacgccat cgcgtcggtc cgggcggtgg agaacgccct
       61 cgggctggag atcccgctga acgcccagta catccggaac ctcctgatca cggcgcacgc
      121 cctgggcgac cacatcgtcc acttctacca gctctccgcc ctcgactggg tggacgtgac
      181 gtcggcgctc aaggccgatc ctgcgaaggc cgcgagcatc gcggaaagcc tctccccgtg
      241 gccagggaac agccggatgc agatggagac ggtgaaaaac agggtttcgg agttcgtcaa
      301 gggcggccag ctggggattt tcgccaacgg ctactggggg caccccgcga tgaagctccc
      361 gccggagatc aacctcatcg ccgtgtccca ctacctccag gcgctcgaca tccagcggaa
      421 ggcgaaccag gcggtcgcga tcctcggcgg caagacgccc cacatccaga acctggcggt
      481 ggggggggtg gcgaacgcga tcaacctgga cgatccggcg accctgaaca tggaaaagct
      541 ctacatggtg aaggaactcc tcacggaggt tacggcgttc gtccagcagg tctacctgcc
      601 ggacgtgtgc gtcatcggcg cgaagtacgc cgaatggctc aagtacggcg ccggggtcac
      661 caattacctc gcggtgccgg acctccccct cgacacgaag gggacgaagt tcgacttccc
      721 cggagggacg atcttcgacg ggaagctcga gacgtacaag ccgatctcgt ccttccagga
      781 tccgtacttc aaggagaacg tgtcggagag catcgcccgg tcctactacg acggggagtg
      841 gcagaagcac ccgtgggagg aggaaaccgt accgacggtg ggagcgttca acgcctcggg
      901 gaaatactcc tggtcgaagt ccccgcggtt ccaggggcgc ccgatgcagg tgggccccct
      961 cgcccaggtc ctgatggggt acgccgccgg ccacgagccg acgatgcgct gggggaaccg
     1021 cgcgttggag atggcctcga aggccgcggg ggcgaagctc gggccgtccc accttcactc
     1081 caccctcgga aggcacctcg cccgggcggt ccgctgcgcg gtgctggggg agctggcaat
     1141 gaagcattgg cagctgctgg cgacgaatat cgggaagggg gacgtctccg tgttcaaccc
     1201 gccggccttc acccgttccg aacagagggg gttcggcttt cacgaggctc cccgcgggac
     1261 cctttcccac tggatcgtga tgaagggcgg gaagatccag aactaccagg cggtggttcc
     1321 ctccacgtgg aacgccggcc cccgggacgg caagggacag aaggggccgt acgaggcatc
     1381 cctcttggga aacccggtct cggaccccgg acgtcctttg gaggtgcttc ggaccctgca
     1441 ctccttcgat ccgtgccttg cgtgcgccat ccacatgctg aaggcgaacg gggaggaggt
     1501 caccaggaaa aacgtcatct gacggacggc ttcttccggt gatatcatcg ggcggtccaa
     1561 tccacccgtc cggaggaagc cgtgcgcacc gtcgttctcc tctgctgctc caacgtcttt
     1621 atgacgttcg cctggtacgg ccacctgaag acgctgccga cgaagccgct ctacatcgcg
     1681 atcctcgtga gctgggggat cgccttcttc gagtacgtcc tgatggtccc ggcgaaccgg
     1741 atcggcgtgc agagcttcac cgtcccgcag ctcaaggtga tgcaggaggt gatcacgatg
     1801 gtcgtcttcg cggggttcgc ggttttttac ctggaagcgc ccctgaagct cgactatcta
     1861 tgggccggtc tctgtcttgt gggcgccgcc tacttcatgt tccggacgat ataagacgaa
     1921 aaaggggggc ggtgggcgcc cccctgagtt cgcggggttc cgcggtcact tccccccgcc
     1981 catcattcct tccatgtgtt tcaggtgcga atcctggaga tcggtgagca gcttcgcatg
     2041 ttccagggat gctgcgcgga aagccgcgtc gtccttcgac ttcagggcct ccatcttcgc
     2101 ctcgagcgcg cgcagcttcg cgatcgtccc gcgcatctcc tccatgtggc gccccatccc
     2161 ttccttcatc gaacccccgc cgccgtgcat cctccggtgc atccccccgg gggctgctgc
     2221 tgcattgtcc tgcatgcatg ggggaaccgc cttccccgtg cccatggggc agccggattc
     2281 gcaaccgctt ccgggacacc ccgggcattc gccgcggtgt ggacaatccg gaccgcaccc
     2341 ttcgtagcgg cagcactcgc ttccgctccc ggatcccgga tcggcgtgta cggttttcgc
     2401 cccggcata
//
LOCUS       DATGYW010000434         1502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_307478, whole genome shotgun sequence.
ACCESSION   DATGYW010000434 DATGYW010000000
VERSION     DATGYW010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307478"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..1102
                     /locus_tag="VK429_06065"
     CDS             2..1102
                     /locus_tag="VK429_06065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006919787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HLN91410.1"
                     /translation="MEGKACCDSEAERGIGEPDQSAAIGSKDLRSYLLSGILLLSGWW
                     LLYRSLAPFSRWLTHDVFSLARGSHFASALEFFIFDTPKVLLLLALVVFGVGVARSYF
                     TPERARRILAGKREAVGNVFAALLGIVTPFCSCSAVPMFIGFVTAGVPLGVTFSFLIS
                     APMVNEIALVLLFGLFGWKIAALYLGTGLGIAMIAGWTIGRLGMEKHVESWVYQAIGI
                     GAEKTEEESMSIADRIRYGYEAVRDIVGKVWVYVVLGIAVGAGIHGYVPENFLASFMG
                     SDAWWSVPLAVLIGIPMYSNAAGIIPVVQALLAKGAALGTVLAFMMAVIGLSLPEMII
                     LRKVLKFRLVATFAGVVGVGILIVGFLFNRIL"
     gene            1137..1373
                     /locus_tag="VK429_06070"
     CDS             1137..1373
                     /locus_tag="VK429_06070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011339844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HLN91411.1"
                     /translation="MKTLQILGTGCPKCKKLAETTEEAAKSLGMEYRMEKVTDIRAIM
                     GFGVLTTPALAVDGVVKVAGKVPSTAEIRKILSV"
BASE COUNT          250 a          412 c          513 g          327 t
ORIGIN      
        1 gatggaaggc aaagcgtgtt gcgattcgga ggcggaacgg gggatcgggg agccggacca
       61 atcggcggcc atcggatcga aggacctaag gagttatctc ctttccggca tcctgctgct
      121 ctccgggtgg tggcttctct accggagcct tgcacccttc tcaagatggc tgacccatga
      181 cgtcttttcg ctggcccgtg ggtctcactt cgcctcggcg ttggagtttt tcatcttcga
      241 taccccgaaa gtcctcctgt tgctggccct ggtggtgttc ggggtcgggg tcgcccggtc
      301 ctactttacg ccggaacggg cacgccggat cctggcggga aagcgggagg cggtggggaa
      361 cgttttcgcg gcccttctcg ggatcgtgac ccccttctgc tcctgttccg cggtcccgat
      421 gttcatcggg ttcgtgacgg cgggagtccc gctgggtgtg acgttttcct tcctgatttc
      481 cgccccgatg gtgaacgaga tcgcactcgt gctcctgttc ggattgttcg ggtggaagat
      541 cgcggccctt tatctgggca ccggtcttgg gatcgcgatg atcgcgggat ggacgatcgg
      601 ccgcctcggc atggagaaac atgtcgagtc ctgggtgtac caggccattg ggatcggcgc
      661 ggagaagacc gaggaagagt cgatgtcgat cgcggatcgc atccggtacg ggtacgaggc
      721 cgtccgcgac atcgtgggga aggtctgggt gtacgtcgtc ctcggaatcg cggtcggcgc
      781 ggggatccat ggatatgtgc ccgaaaactt cttggcgtcg ttcatgggca gcgacgcctg
      841 gtggtcggtg cctcttgccg tgctgatcgg catcccgatg tattccaacg ccgcggggat
      901 catcccggtc gtccaggcgc tgttggccaa gggagcggcc ctggggaccg tcctggcgtt
      961 catgatggcg gtcatcgggc tttcccttcc agagatgatc atcctccgca aagtgctgaa
     1021 atttcggttg gtcgcgacat ttgccggcgt cgtgggggtc gggatcctga tcgttggatt
     1081 cctcttcaat cggatcctct gatgcgtcgt catttgagtg aatcaaggag aatgacatga
     1141 agacgctgca gatcctgggg accgggtgcc ccaagtgcaa gaaactcgcg gaaacaaccg
     1201 aggaggcggc gaagagcctc ggcatggagt accggatgga gaaggtgacg gacatccggg
     1261 ccatcatggg cttcggggtg ttgaccacgc ccgcccttgc ggtggacggc gtcgtgaagg
     1321 tggcgggaaa ggtgccctcc acggcggaga tccggaagat tctctcggtc tgaccgaccg
     1381 gtgccctttc tcttcgtgca gggaaaaaac gcgacgcagg atagtttcga cagcgctcct
     1441 cccacggcca tttgacaaga aatggtggag aggcgatgct gatcgccaga atggcgcccg
     1501 gt
//
LOCUS       DATGYW010000435         1746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_467150, whole genome shotgun sequence.
ACCESSION   DATGYW010000435 DATGYW010000000
VERSION     DATGYW010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_467150"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            307..897
                     /locus_tag="VK429_06075"
     CDS             307..897
                     /locus_tag="VK429_06075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HLN91412.1"
                     /translation="MRKPLMIAGVMLLCCGIAFGAETARKGGKPMVKLETSLGVIKVE
                     LYPDKAPVSVKNFLTYVKEGHYDGLIFHRVIRDFMVQGGGFTKEMKERGSKHAPIKNE
                     ADNGLKNDRGTLAMARTSVVDSATAQFFINVVNNDFLNHRAKTPQGYGYAVFGKVTEG
                     MDVVDKIRAVPTGNSGMFQDVPLQPVTITKATVLQE"
     gene            complement(938..1423)
                     /locus_tag="VK429_06080"
     CDS             complement(938..1423)
                     /locus_tag="VK429_06080"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HLN91413.1"
                     /translation="MYEKILVPLDGSDLAERAILHAQEIARGTRSEILLMQAVNLPMP
                     VVPEAVLVPDAKWLDEAKKEAAQYLEGIAARLRDEGIRVRTLLDERPPADAILHVATR
                     EEVDLIVMSTHGRGGFSRLLMGSVAESVFRATSRTVMLVKPERPAATAVKDEDWYLHI
                     P"
     gene            1465..>1746
                     /locus_tag="VK429_06085"
     CDS             1465..>1746
                     /locus_tag="VK429_06085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91414.1"
                     /translation="MLTLQSLDVLPVESGTRLDRFLRDRFPGVPSRSVRFAIEGGAVR
                     VGGAPSPKGRILREGEIVIVASLAEWKDWLPVPSDLPGASVVHEDPHVAV"
BASE COUNT          335 a          566 c          548 g          297 t
ORIGIN      
        1 taggtcgcca cctgcagccc caggttcttc tccacggcca tctgcaccgc gtccccgatc
       61 gacagcgtca gcgtatcggc gccggcggcg gagaggggac acgcgcacac gaatacgagg
      121 aggagcggca gtacacgcag cgatgagatc ttcatgggag tcggcatccg aatcattata
      181 gacgtatgaa cccgggaaac gatcccaagg ttaccacctg cttcgtaaga atcggcatga
      241 acgcttccac cgtgcggaag attcgaatac aatgaaaatc aaaatcaaag gaatcggggg
      301 tcttcgatgc ggaaaccgct gatgatcgcg ggggtcatgc ttctctgctg cgggatcgcc
      361 ttcggcgccg agaccgcccg caaaggaggc aagcccatgg tgaaactcga aacaagcctc
      421 ggggtgatca aagtcgaatt gtaccccgac aaggcgcccg tttccgtgaa gaactttctc
      481 acctacgtca aggaaggtca ttacgacggg ttgatcttcc accgcgtgat ccgggatttc
      541 atggtccagg gcgggggatt cacgaaggag atgaaggagc ggggatcgaa acacgcaccg
      601 ataaaaaacg aggcggacaa cgggttgaag aacgatcgcg gaacgctcgc gatggcgcgg
      661 acctcggtcg tcgactccgc gacggcgcaa ttcttcatca acgtggtgaa caacgacttc
      721 ctcaaccacc gggcgaagac cccgcaaggg tacggctacg ccgtgttcgg aaaggtgacc
      781 gaggggatgg acgtcgtcga caagatccgc gccgtgccca ccgggaactc cggcatgttc
      841 caggacgtcc ccttgcagcc cgtcaccatc acgaaggcga cggtccttca ggagtaagag
      901 aatccctccg gggccggtcg gccccggagg ggctccccta cggaatgtgc agataccagt
      961 cctcgtcctt caccgcggtg gccgcaggcc gttccggctt tacgagcatc accgtgcgcg
     1021 acgtcgcccg gaacacgctc tccgcgacgc ttcccatcag gaggcgggag aacccgccgc
     1081 gcccgtgcgt gctcatcacg atcaggtcga cctcctcccg ggtggccacg tgaaggatcg
     1141 cgtcggcggg aggccgttcg tccagcagcg tgcggacgcg gatcccctcg tcgcgcagtc
     1201 gggcggcgat cccttcgagg tactgcgcgg cctccttctt cgcctcgtcg agccacttgg
     1261 cgtccgggac caggacggcc tcggggacga cgggcatcgg gaggttgacg gcctgcatca
     1321 ggaggatttc gctgcgggtt ccccgggcga tctcctgcgc gtgcaggatc gcccgctccg
     1381 caaggtcgga gccgtccagc ggaacaagga tcttttcgta catggcggac cccccctttc
     1441 tttgaataca gtatacaccg taagatgctg actctccaat ccctcgacgt cctcccggtg
     1501 gagtccggga cccgtctcga ccggttcctg cgggaccggt tcccgggggt cccttcgcgc
     1561 agcgtgcggt tcgccatcga gggcggggcg gtccgggtcg gcggcgcccc ctcccccaag
     1621 gggcgcatcc tccgggaagg cgagatcgtc atcgttgcgt ccctcgcgga atggaaagac
     1681 tggctccccg tcccctccga tcttcccggg gcgtccgtcg tccacgaaga cccccacgtc
     1741 gccgtc
//
LOCUS       DATGYW010000436         2238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_81975, whole genome shotgun sequence.
ACCESSION   DATGYW010000436 DATGYW010000000
VERSION     DATGYW010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81975"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..>2238)
                     /locus_tag="VK429_06090"
     CDS             complement(55..>2238)
                     /locus_tag="VK429_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020875686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLN91415.1"
                     /translation="FVKAAIDEVVKTLLEAIVLVFLVMYLFMGNIRATLIPTIAVPVV
                     LLGTFAVLGLFGFSINMLTMFAMVLAIGLLVDDAIVVVENVERVMAEEGLSPREATAK
                     SMDQITSALIGIGLVLSAVFGPMAFFGGSTGVIYRQFSVTVIASMLLSVVVALVLTPV
                     LCASLLKPVPKGHEPAKSGFALFRPFFRWFDRIFNRLRGGYQEIVALILVRKMRYMVV
                     YLLIVVALVFLFLRMPTSYLPDEDQGFMYSQVVLPAGSTREQTEQVLNQLRDHFLVNE
                     KEAVASVFTVAGSGFSGAGQNVGLAFIMLRDWDLRRRADQKVNALVERAMGKFSKYRN
                     ALAFAFAPPAVRELGQAGGFDFQLQDRGGLGHEKLMAARNQLLGLAAKEPRLTRVRPN
                     GLEDVPQYRIDVDLDKGGALGVPIDAIHNTISASFGGAYVNDFIQGGRVKRVYVQADA
                     PYRMLPNDLDRLYVRNSAGMMSPFSSFASGHWFQGSPRLERFNSFPSMNIWGEAPRGK
                     SSGEAMQAMEGIVSKLPKGIGFDWTGLSYQERMAKSQAPMLFAFSIIVIFLCLAALYE
                     SWIVPITIVLALPLGVIGGVVATSLRGLPNGVYFQIGLLTVLGLTTKNAILIVQFAMA
                     KVDEGAGLIEATLEGARLRFRPIVMTSLAFGFGVLPLAMANGAGAGAQVAIGTGVLGG
                     MITATFLAIFFIPLFFVGVVQLFGKKKGARTEGSGPDAESPSEGR"
BASE COUNT          454 a          726 c          693 g          365 t
ORIGIN      
        1 cggtgagaag aacggccgtt atcgcaagga gtgaaaacag cttctttccc atcttcagcg
       61 cccctccgaa ggactctcgg cgtccggacc ggaaccttcg gtccgggcgc ccttcttctt
      121 tccgaacagt tgcacgaccc ccacgaagaa gaggggaatg aagaagatcg ccaggaaggt
      181 ggcggtaatc atccccccaa ggacgccggt gccgatggcc acctgcgctc ccgcgccggc
      241 cccgttggcc atggccaggg gaaggacgcc gaagccgaag gccagcgagg tcatgacgat
      301 cgggcgaaat ctcaatctcg ccccctcgag cgtcgcctcg atcaacccgg ctccttcgtc
      361 caccttggcc atggcgaact gaacgatcaa aatggcgttc ttggtcgtga gccccaggac
      421 ggtgaggagc ccgatctgga agtacacgcc gttcggcagc ccccgaagcg acgttgccac
      481 cacgccgccg atgaccccga gcggcaatgc cagcacgatc gtgatgggta cgatccagct
      541 ttcataaagt gccgccaggc agaggaagat cacgatgatg gaaaaggcga agagcatcgg
      601 ggcctgggac ttcgccatcc gttcctggta ggagaggccg gtccagtcga agccgatccc
      661 cttgggcagc ttcgagacga tcccttccat ggcctgcatc gcctcccccg agctcttccc
      721 gcgcggcgct tcaccccaga tattcatcga cgggaagctg ttgaaccgct caaggcgcgg
      781 cgatccctgg aaccaatggc cggaggcgaa ggaagagaac ggcgacatca tccccgcgct
      841 gttgcggacg tagagcctgt ccaggtcgtt cggcagcatg cggtacgggg cgtcggcctg
      901 gacgtatacc cgcttgaccc gtccgccctg gatgaagtcg ttcacgtagg ctccgccgaa
      961 cgatgccgag atggtgttgt ggatggcatc gatgggaact cccagggcgc cccccttgtc
     1021 caggtccaca tcgatccggt actggggcac gtcttccagt ccgttgggac ggacgcgggt
     1081 cagcctcggc tccttggcgg ccaagccgag cagctggttg cgggccgcca tcagcttttc
     1141 gtggcccaac ccgccccggt cctgcaattg gaagtcgaac ccgcccgcct ggccgagctc
     1201 acgcaccgcc ggcggcgcga acgcgaacgc cagcgcgttg cgatacttcg agaacttccc
     1261 catggcgcgt tccaccaggg cgtttacttt ctggtccgcg cgccggcgca gatcccagtc
     1321 cctgagcatg atgaatgcca gcccgacgtt ctgtcccgcg cctgaaaagc cgctgccggc
     1381 gaccgtaaag acggacgcta ccgcttcctt ttcattcacc aggaaatggt cccggagctg
     1441 gttcaggacc tgctcggtct gctctcgtgt cgagcccgcc ggcagcacca cctgggagta
     1501 catgaatccc tggtcctcgt cggggagata ggaggtgggc attcgcagga acaggaatac
     1561 cagggcgaca acgatcagga ggtaaacgac catgtagcgc atcttcctca caaggatcag
     1621 ggccacgatc tcctggtatc cgccccgtaa ccggttgaag atccggtcga accaccggaa
     1681 gaacggccgg aagagggcga agccggattt cgcgggctca tgccccttcg gcaccggctt
     1741 caggagcgac gcgcacagga ccggggtcag gaccagggcc accacgaccg acagcagcat
     1801 ggaggcgatg acggtgacgg agaactggcg gtaaatgacg ccggtcgagc cgccgaagaa
     1861 cgccatggga ccgaacaccg ccgagaggac cagtccgatc ccgatcaggg cgctggtgat
     1921 ctgatccatc gatttggcgg tggcttcccg gggggaaagt ccctcctcgg ccatgacccg
     1981 ttccacgttt tccaccacga cgatggcgtc gtccaccagg aggccgatgg ccaggaccat
     2041 cgcgaacatg gtcaacatgt tgatggagaa tccgaacaga cccaggacgg cgaacgtccc
     2101 caggagcacc acgggcaccg cgatggtcgg gatcagcgtg gcgcggatgt ttcccatgaa
     2161 aaggtacatc accaggaaga ccagcacgat cgcctcgagc agggtcttga ccacctcgtc
     2221 gatggccgcc ttcacgaa
//
LOCUS       DATGYW010000437         2163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_82014, whole genome shotgun sequence.
ACCESSION   DATGYW010000437 DATGYW010000000
VERSION     DATGYW010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82014"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..428
                     /gene="rpsH"
                     /locus_tag="VK429_06095"
     CDS             <1..428
                     /gene="rpsH"
                     /locus_tag="VK429_06095"
                     /inference="COORDINATES: protein motif:HMM:NF001109.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HLN91416.1"
                     /translation="GELVGGGGTMANTDHVSDLLARLRNAQQARFDQMEIPSTNLLQG
                     ITQILKEEGFIKGYRVVTEKNTSRLRIALKSTPETGYAIKGIRRMSRPGRRLYVGKDD
                     IPTVKNGFGIAIVSTSRGVMTGEKAKKLSIGGELLCEIW"
     gene            465..998
                     /gene="rplF"
                     /locus_tag="VK429_06100"
     CDS             465..998
                     /gene="rplF"
                     /locus_tag="VK429_06100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011340418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HLN91417.1"
                     /translation="MSRIGKKPVVLPAGVKVEAANGMLTVTGKKGRLARPIPGKVAIE
                     VKEGTATVVLLDKDAGNLFGMYRTILANMVEGVTDGFLRTLEIVGVGYKAESKGGALH
                     LALGYSHPVVFPLPAGVTAQVESNTVIKLSGFDKELLGETAARVRMLRKPDVYKNKGI
                     RYRGERLIKKVGKAAGK"
     gene            1039..1407
                     /gene="rplR"
                     /locus_tag="VK429_06105"
     CDS             1039..1407
                     /gene="rplR"
                     /locus_tag="VK429_06105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012529382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HLN91418.1"
                     /translation="MSQKNQRETARQNRKSRIRKRIFGTEQRPRLSVFRSAKHIYAQL
                     VIDSTGSTILAVSTLSPDLRAEIGDLDKSDAAKKVGQWIGKKALEKNIQQVVFDRNGF
                     LYHGRIKALADGARESGLVF"
     gene            1448..1948
                     /gene="rpsE"
                     /locus_tag="VK429_06110"
     CDS             1448..1948
                     /gene="rpsE"
                     /locus_tag="VK429_06110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HLN91419.1"
                     /translation="MKRVDPEGLDLKDRVVHISRVAKVVKGGRRFSFSAVVVVGDANG
                     HVGTGLGKANEVPDAIRKAVQNAKRSLIMVPLVEGTIPHGVTGEYGAAKVIIRPASPG
                     TGVIAGGGVRAVIESSGITNILTKSLGSNNPHNLVKATIEGLSQLRTAAQILAVRGPR
                     EEEATA"
     gene            1945..2139
                     /gene="rpmD"
                     /locus_tag="VK429_06115"
     CDS             1945..2139
                     /gene="rpmD"
                     /locus_tag="VK429_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012536094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HLN91420.1"
                     /translation="MSGKLRITLVRGLSGRTTYHRNVVKGLGITRLNRPVVRMDTPEI
                     RGMVEKIRFLVRMEEVGEAS"
BASE COUNT          477 a          619 c          739 g          328 t
ORIGIN      
        1 aaggcgagct ggtaggggga gggggcacaa tggcgaacac cgatcacgtg tcggatctgc
       61 ttgcgcggct acggaatgcc cagcaggccc gcttcgatca gatggagata ccctctacga
      121 acctccttca gggaatcacg cagatcctca aggaggaagg gttcatcaag gggtaccggg
      181 tcgtgaccga aaaaaacaca agccgcctgc gcattgccct caaatcgacc ccggaaactg
      241 gatacgccat caaggggatt cgccggatga gccggccggg acggcgcctt tatgtcggga
      301 aggacgacat cccgacggtg aagaacgggt tcggcatcgc catcgtctcc acgtcgcgcg
      361 gcgtcatgac gggggagaag gcgaagaagc tttcgatcgg cggcgagctg ctctgcgaga
      421 tctggtagac ggcttccggg ttctttccaa cgaggagtga aacgatgtcg agaatcggta
      481 aaaaacctgt ggtccttccc gccggagtca aggtggaagc agcgaatgga atgctgaccg
      541 tcaccgggaa gaaagggcgg cttgcccgac cgatcccggg gaaggtggcg atcgaagtga
      601 aggaggggac ggcgacggtc gtcctgctcg acaaggacgc cgggaacctc ttcgggatgt
      661 accggacgat cctggccaac atggtcgagg gcgttacgga cggcttcctg cgaaccctcg
      721 agatcgtcgg cgtgggctac aaggccgagt ccaagggagg cgcgcttcac ctcgcgctgg
      781 gatactccca cccggtcgtt ttccccctgc cggcgggggt gaccgcgcag gtcgaatcga
      841 acaccgtgat caagctgagc gggttcgaca aggaactgct cggggaaacg gccgcgcggg
      901 tccggatgct ccggaagccg gacgtgtaca agaacaaggg aatccgctac cgcggtgaac
      961 ggctgatcaa gaaggtcggg aaggcggcgg gcaagtagtg gacaacgcgc aattccttac
     1021 gacggggatc cgaacgccat gagccagaaa aatcagcggg aaaccgcacg acagaaccgg
     1081 aaaagccgga tccggaagcg gatcttcggc accgagcagc gccctcggtt gtccgtcttc
     1141 cgcagcgcga agcacatcta tgcccaactg gtgatcgact ccacggggtc caccatcctc
     1201 gcggtgtcca cgctctcccc cgatctccgg gcggagatcg gggacctcga caagagcgac
     1261 gccgcgaaga aggtcgggca gtggatcggg aaaaaggcgc tggagaaaaa tatccagcag
     1321 gtagtgttcg accggaacgg gttcctctac catggccgaa tcaaggccct ggcggacggc
     1381 gcccgcgaat ccgggttggt attctgatca tgagcgcaca ctttcacgtg gggacgggga
     1441 ggaaggcttg aaaagagtcg atccggaagg gctggattta aaagaccgcg tcgtgcacat
     1501 cagccgcgtc gccaaggtcg taaagggcgg gcgccgcttc tccttcagcg cggtggtcgt
     1561 cgtcggcgac gccaacgggc acgtcgggac gggtctcggg aaggcgaacg aggttcccga
     1621 cgcgatccgc aaggcggtgc agaacgccaa gcggtcgctg atcatggttc cgctggtgga
     1681 gggcacgatc ccgcacggcg tgaccggcga gtacggagcc gcgaaggtca tcatccggcc
     1741 cgcctccccg ggaaccggcg tcattgcggg cggcggagtc cgcgccgtga tcgaatccag
     1801 cgggataacg aacatcctga cgaagtccct gggaagcaac aatccccaca acctcgtgaa
     1861 ggcgacgatc gagggccttt cccagttgcg taccgcggca cagatcctcg cggtccgggg
     1921 tccgagagag gaagaggcga cggcatgagc ggaaaactgc gcatcaccct cgtgcggggc
     1981 ttgagcggga gaaccacgta ccaccgcaac gtggttaagg gactcgggat cacccgtttg
     2041 aaccgtccgg tcgtccggat ggacacgccg gagatccgcg ggatggtgga aaagatcagg
     2101 ttcctcgtcc ggatggaaga ggtgggagaa gcgtcatgaa actcacggat ctgcgccccg
     2161 caa
//
LOCUS       DATGYW010000438         2884 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_346233, whole genome shotgun sequence.
ACCESSION   DATGYW010000438 DATGYW010000000
VERSION     DATGYW010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2884
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346233"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            39..>2884
                     /locus_tag="VK429_06120"
     CDS             39..>2884
                     /locus_tag="VK429_06120"
                     /inference="COORDINATES: protein motif:HMM:NF015649.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BTAD domain-containing putative transcriptional
                     regulator"
                     /protein_id="HLN91421.1"
                     /translation="MPGLSVFSQRYFEDLSSILPFPSLLVLDDCHRIREDSPFFEMLR
                     EGISRLAPGIGVVLVSRNDPPPAFARDRANRLMETFGWEDLRLTLEEATGIVKLQRKG
                     RPPPGLVRDLFERTDGWAAGLVLLLGRTGMEGVTPRTVGPQMAAEIIDYFGSEIFRRL
                     DGERRDFLLRTAFLPRMTPSMAERLTGAERAGSFLSEMNRQNLFTKKYPQREPVYEYH
                     DLFREFLLQQAGSAFSMEEFASIRRAAAALLERAGYVEDAVVLFREAGDWKELSKLIL
                     SQGRYLVGQGRYKTLLEWLGALPKEVLIDDPWLLYWKGVCLMPFSPAESRARFEEALH
                     SFDGRREAPGVFRSWAGVVESIITPVENLTPLDGCISLLPRLLEKYGGLPSGEIGDEV
                     TCWMFRALSYRQYPRADVELWTPRAIAVAQTTTDKRLKFMLNLGFLVSFQITKDTREA
                     ERLFASLREMLRQPDATPLMRLSVDSMEAVCLVLSAQYERCLRVATEGLAFAENTGVH
                     VVDVFLQAYAAAAAFKLGDFETGNRFLDRMAATLDTMKPLSLGQFHHLAASEALHRRD
                     LIMASFHSRECLRLWEESGFTTHIHAALILAAHVHHALHEGEDAFRIVAETRRNGYEI
                     RNFYGVWASYLTEAYFHLERDDDAAAIGPLRKGLQVGRETGLFGASLRMQDMFVKVSA
                     KALEEGIEVDYVRELIRRNHLVPDPANPDLEQWPWPVKVYTLGRFGLLVDDRPVESGR
                     KVQQKPLALLKALLALGGREVPEGRLAELLWPEAEGDLAHHSLEVALSRLRKLLGKED
                     ALELKEGRLSLSNRQCWVDVWAFERFLGQAEKARKEGKGTVAIRLYEKALFLYTGPFL
                     QSEEMACAASPREKLRSGFLRAVAHLGQCYEDSERWEEAVSCYGKGIEADDLAEELYR
                     RLMVCHIRQGREVEALSVYRRCRKTLLSVLGVDPS"
BASE COUNT          504 a          844 c          965 g          571 t
ORIGIN      
        1 gcaagaggaa gcgtcttccg ctcctgaccc cggaccgtat gcccggcctg tcggtgttct
       61 cgcagcggta cttcgaagac ctctcctcga tacttccgtt cccctccctg ttagtgctgg
      121 acgactgcca ccgcattcgc gaggattccc cgttcttcga gatgctccgg gaggggatct
      181 cccgcctcgc tccggggatc ggcgtcgtcc tcgtcagccg caacgaccct cctcccgcct
      241 tcgcgcggga ccgggccaac cggctcatgg agacgttcgg gtgggaggat ctccgcctga
      301 ccctggagga ggcgacgggg atcgtgaaac tgcagcgaaa gggacggcct cccccggggc
      361 tggtgaggga tctgttcgag cggacggacg gctgggcggc gggtctcgtt ctcctgttgg
      421 ggaggacggg catggagggc gtcacacccc ggaccgtcgg gccgcagatg gcggcagaga
      481 tcatcgacta tttcggaagc gagatcttcc ggcgactgga cggggagcgg cgggactttc
      541 ttctgcggac cgccttcctg cccaggatga cgccgtcgat ggcggagcgg ttgacggggg
      601 cggagcgcgc cggatcattc ctgtcggaga tgaaccggca gaacctgttc accaagaagt
      661 atccgcagcg ggagccggtc tacgaatacc acgacctctt ccgggagttc cttctccagc
      721 aggcaggaag cgctttctcc atggaggaat tcgcatcgat ccgtcgggcc gccgccgccc
      781 tcctggaacg ggcaggatac gtcgaggacg ccgtggtgct cttccgcgag gcgggggatt
      841 ggaaagagct ctcgaaactg atcctgtccc agggcagata cctcgtcggg caggggcggt
      901 ataagacgct gctggagtgg ttgggggctc tccccaagga ggttctcatc gacgacccgt
      961 ggctgctcta ctggaaggga gtttgcctca tgcctttttc tcccgcggag agccgggccc
     1021 gcttcgagga ggccttgcat tcgttcgacg ggcgtcggga agcgcccggg gtcttccgat
     1081 cctgggccgg cgtggtcgaa tccatcatca caccggtgga aaatttaacc ccgctcgatg
     1141 gatgcatttc gctccttccg cgccttctcg aaaagtacgg cggcctcccg tccggcgaga
     1201 tcggggacga ggtcacctgc tggatgttca gggcgctatc ctatcggcag tatccccggg
     1261 cggacgtgga gttgtggacg cctcgcgcca tcgctgttgc ccagaccacc acggacaaac
     1321 ggctgaagtt catgttgaac ctcggtttcc tggtgtcctt tcaaatcaca aaggataccc
     1381 gggaagcgga aaggttgttc gcttccttga gggagatgct ccggcaaccg gatgccacgc
     1441 cgttgatgcg gctctcggtg gattctatgg aggcggtgtg tctggtctta agcgctcagt
     1501 acgagcggtg ccttcgggtt gcgaccgaag gacttgcctt cgcggaaaac acgggggtcc
     1561 acgtcgtaga cgtcttcctt caagcctatg cagccgcggc tgctttcaag cttggtgatt
     1621 tcgaaaccgg gaaccggttt ctcgacagga tggccgccac gctggatacg atgaaaccgc
     1681 tctccttggg ccagtttcac catctcgcag cttccgaggc gctgcaccgg cgtgatttga
     1741 taatggcctc ttttcattcg agagagtgtc tgagactttg ggaagagagc gggttcacca
     1801 cccacatcca cgctgcactt atccttgctg cccacgttca ccacgccctc catgagggcg
     1861 aggacgcatt ccggattgtg gcggagacgc gtcgtaacgg ctacgagatc cggaacttct
     1921 atggcgtttg ggcgtcgtac ctcaccgagg cgtatttcca tctcgaaaga gatgacgacg
     1981 cggcggcgat cggtccccta aggaagggcc tgcaggtcgg tcgcgaaacc gggctcttcg
     2041 gagcatctct ccggatgcag gacatgtttg taaaggtctc cgccaaggcg ctcgaagagg
     2101 ggatcgaggt cgactacgtc cgggaactca tccggcggaa ccatcttgtt ccggaccctg
     2161 cgaatccgga cctggagcag tggccctggc cggtgaaggt ctacacgctg gggcggttcg
     2221 gactcctggt ggatgaccgg cccgtcgagt ccggtcggaa ggtgcagcag aagccgctgg
     2281 cgctccttaa agcattgctt gcgctcggtg gacgagaggt gcccgagggg cggctcgccg
     2341 aactcctctg gccggaagcc gaaggagacc tggcccatca ctccttggag gtcgccttga
     2401 gccgattgcg gaagctcctg ggaaaagagg atgccctgga gctcaaggag gggcgccttt
     2461 ccctctcgaa ccggcaatgc tgggtcgacg tctgggcctt cgagcggttc ctggggcagg
     2521 cggagaaggc gaggaaggag gggaagggga cggtggcgat ccgcttatac gagaaggcgt
     2581 tgtttctata cacggggccc ttccttcaat ccgaggagat ggcctgcgct gcatcgccgc
     2641 gggaaaagct tcggagcgga ttcctgcggg cggtcgcaca cctcgggcag tgctatgagg
     2701 atagcgagcg atgggaagaa gcggtctcct gctacggtaa aggcatcgaa gcggacgacc
     2761 tggccgagga gctgtatcga cggctcatgg tctgccacat ccggcaggga cgggaggtgg
     2821 aagctctctc cgtctatagg cgctgccgga agacgttgtt gtcggtcctc ggtgtggatc
     2881 cttc
//
LOCUS       DATGYW010000439         2018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_346263, whole genome shotgun sequence.
ACCESSION   DATGYW010000439 DATGYW010000000
VERSION     DATGYW010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346263"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..1552)
                     /gene="ltrA"
                     /locus_tag="VK429_06125"
     CDS             complement(62..1552)
                     /gene="ltrA"
                     /locus_tag="VK429_06125"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019973420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003964 - RNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0000373 - Group II intron splicing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HLN91422.1"
                     /translation="MSEDASVNTDAAGWPDESTAYFAVRRMQTKLHGWAGADASRRFD
                     DLFNLVYDRAFLMHAWERVSSNAGSRTAGVDRATVAWIETHVGVVVFLDGIRESLKSG
                     GFRPVEVRQVMIPKRGSSGKLRKLGIPTVADRVVQTAVKAVLEPIFEADFLPCSYGFR
                     PNRRTHDAIAEIHHLASEPINYEWVVEADIAACFDEIGHTPLLERLRARIKDKRVVAL
                     VRAFLKAGILTELGDREETHAGTPQGGPLSPLLANIALSALDEHFDRQWQEQMGTSYR
                     RTKRRKNGLGNWRLIRYADDFVVMVHGERHHAEALREEVAAVLAPLGLRLSPEKTRVV
                     HIDEGFDFLGQNIRRQRKRGTSKYYVYTRPSKKAIQAIKDKVSSKTYRSTRYQDLDKL
                     IISLNQTLVGWATHFRHGVSKDVFSAVDNHAWGRLMRWIRAKYAGKNRLGMKELRRRF
                     CDVGWRIAHNGVAFTGASSVTITRYRYRGSRIPTPWTPNPAAAANG"
BASE COUNT          336 a          710 c          574 g          398 t
ORIGIN      
        1 cccgccgcac ccggcgtgcg aattactccg caccgggcgc tccacgtgtc ttgccggtgg
       61 gtcagccgtt ggcggcggct gccgggttcg gtgtccacgg ggtcgggatc ctgctgccgc
      121 ggtagcggta acgggtgatc gtgacgctgg atgcgccggt gaaggcgacc ccgttgtggg
      181 cgatcctcca tccgacgtcg cagaagcgac gtcggagttc tttcattccg agccggtttt
      241 tgcccgcgta cttggcccgt atccaccgca tcagccgacc ccacgcgtgg ttgtcgaccg
      301 cactgaacac gtccttggac accccgtgcc ggaagtgggt cgcccacccg accagggtct
      361 ggttgagact gatgatcagc ttgtccagat cctggtaccg ggttgacctg tacgtcttgg
      421 agctcacctt gtccttgatc gcctggatgg ctttcttgga cggtctggtg tagacgtagt
      481 acttcgacgt ccccctcttc cgctgcctgc ggatattctg gccgaggaaa tcgaagccct
      541 catcgatatg gactacccgg gtcttctcag gtgacagccg cagccccaag ggcgctagca
      601 cggccgccac ttcctcgcgc agcgcctcgg catgatgcct ttctccgtgg accatgacga
      661 cgaaatcgtc ggcgtagcgg ataaggcgcc agttgcccag gccgttcttt cggcgtttgg
      721 tccgccgata gctggttccc atctgttcct gccattgccg gtcgaaatgt tcgtccaacg
      781 ctgacagggc gatgttcgcc aacagcgggg agagtggccc gccttgtggg gtcccggcgt
      841 gtgtctcttc ccgatccccg agctccgtga ggatcccagc tttcaggaac gccctcacca
      901 gtgcgaccac gcgcttgtcc ttgatcctgg cccgcagcct ctcgagaagg ggggtgtgcc
      961 cgatctcgtc gaaacaggcc gcgatatcgg cctccacaac ccactcgtag ttgatgggct
     1021 cggatgccag atggtggatc tcggcgatcg cgtcatgggt acgccggttc gggcggaacc
     1081 cgtacgagca cggcaagaaa tccgcctcga aaatcggctc gagcaccgcc ttgaccgcgg
     1141 tctggacgac ccggtccgcg acggtgggaa tacctaactt tctcagtttc cccgacgacc
     1201 ccctcttggg gatcatcacc tgccgcacct cgaccggccg gaacccgcca gacttcagcg
     1261 actcccggat accgtccagg aacaccacga cccccacatg ggtctcgatc caggccaccg
     1321 tggcccggtc gacacccgcg gtccgtgacc cggcgttgct cgacacgcgt tcccacgcgt
     1381 gcatcagaaa cgcccggtca tagacgaggt tgaacagatc atcgaaccgg cgggaggcat
     1441 cagcccccgc ccaaccatgc aatttggtct gcatcctccg taccgcgaaa taggccgtac
     1501 tctcatccgg ccaccccgcg gcgtcggtgt tcaccgacgc atcttcggac attactctcc
     1561 ctccttgact gacacgctgc cacccttccc catgtacgtg gctctcccac gctcggagta
     1621 ctacggcggc tccgccccac ccgcgccttc ggctgacgtt gcgcctatcc ccacccaccc
     1681 caccggcttg tgggataacg tgtggaacga ccacgagcgg ttcccgtgtt cactgctgtt
     1741 cggtcaacgg gttaggcacc cggctatacc cctgcggctt cgccacggtt acgccgtaga
     1801 cattcaccgt ggcctcccaa cccaggcaaa acagacccga tcaggagttc tccgcccgtc
     1861 atgaaggacg gatacgcacc gcttaccagc ccacatccgc cggattagag ctggcgatca
     1921 gtcaagaggc gtaacgacac cggtttctct cgtatacctt cccgtctcgc tcaccgggcc
     1981 cgacccatcc ggcagtgctc ggccgacccg acttcgtc
//
LOCUS       DATGYW010000440         4231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_308054, whole genome shotgun sequence.
ACCESSION   DATGYW010000440 DATGYW010000000
VERSION     DATGYW010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4231
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308054"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VK429_06130"
     CDS             <1..511
                     /locus_tag="VK429_06130"
                     /inference="COORDINATES: protein motif:HMM:NF015142.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004721 - phosphoprotein phosphatase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HLN91423.1"
                     /translation="PGQVAERTPANVPGAGRVSERLFGLPGLTVVGRVAPGILRGAQP
                     EPEGYATLKAMGVRTVISLRTNHGERKAVEAAGMRYIEIPISLWKNVDPAAVQKALSV
                     MTDPANQPVFVHCSRGADRMGVVAAVYRMEVDGWSEAEAEAEMEAFGFHEFWSQFKEF
                     VRRYPEVRE"
     gene            complement(541..879)
                     /locus_tag="VK429_06135"
     CDS             complement(541..879)
                     /locus_tag="VK429_06135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HLN91424.1"
                     /translation="MIRRSSLPVLPAAPVDLMAVAVGDRQVILAWTEGGAGGLGFRIE
                     RAVCNSPCRAFVEIGEVGPHVAAFRDGSVIPRTTYSYRVQAWNAYGDSPFSNVVEVTP
                     PQVGTELPDD"
     gene            complement(1075..1707)
                     /locus_tag="VK429_06140"
     CDS             complement(1075..1707)
                     /locus_tag="VK429_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014260863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLN91425.1"
                     /translation="MLKILIADDHEVVRKGLGKVLAETLNPIKVDEARNGQETVNMVL
                     KSGYDLVVLDLKMPGKSGLEVLKEIKQHRPKLPVLILSMHPEEQFAIRAMRAGASGYL
                     TKECAGDELVLAIRKALNGERYISGSLAQILAEELDNDSGKPLHEILSDREYQVMLMI
                     ASGKPVGAIAKELCLSAKTISSYRTNILLKTRMKNNAEITHYAIQNKLVD"
     gene            complement(1700..3034)
                     /locus_tag="VK429_06145"
     CDS             complement(1700..3034)
                     /locus_tag="VK429_06145"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HLN91426.1"
                     /translation="MPPKTKSHLKAENPVARARLAEPEDKSANRPSGKRGGLPESDIA
                     ERKRIEEALKVSEIRYRRLFETAKDGILILDAATGRITDANPYLQELLGYSRTELLGK
                     MLWEIGPFRDITASKGAFRRLQRKEYIRYDNLPLETKEHQHKHVEFVSNVYQENGTRV
                     IQCNIRDITPRHHVEQILANASKELEKRVEERTAELLTANKLMKKMLDEGKRAEERIT
                     KSRERLRNLSARLQSLLEEERARISREIHDELGQALTALKLDLSLTRRSLASGGHAGQ
                     SAKVQELERTVNRIIRTVRKIATELRPGILDELGVGAAIEWLGKDFRNRTGIRCNVAV
                     KGVEKISDAVLSTAIFRIVQEALTNVMRHAAASEVKVGLGKMDGTLILEVRDNGIGIN
                     ERRIFDSKSLGIIGIRERVHLLGGEAVISGKPGEGTLVGVTIPLGKGAISNA"
     gene            complement(3091..>4231)
                     /locus_tag="VK429_06150"
     CDS             complement(3091..>4231)
                     /locus_tag="VK429_06150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012468447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fatty acid cis/trans isomerase"
                     /protein_id="HLN91427.1"
                     /translation="KLHGDRLAMPIEMGSDPGLFSALTDKHKKFAIEYYKARQDTYAA
                     LHYSGLGYDAIWKGNRASDAPLLTVYRHFDSASVHKGALGNLPKTLWVIDYPLLERVY
                     YALVAGFDVYGTVGHQLVERLYMDRLRIEGESYFLDFLPPETRKEIMQSWYLDTDLEK
                     MDYHQGALPSGIRFATPDPKREFVEHLVTSEINKETAITFDKINYIRSGEDYPAIPLN
                     YESPEDYLQGFRAVSRPGTPFVALANDHNANLAYMRIRLKNGKDVVATLVINRWHNNV
                     AFLLGEDKRLDPLKDDLDFIPGMIGSYPNLFFDIRQDDIPDFINLINFFDKSETSMAR
                     LAKYGISRSDNRFWETYDWFQKRFDEDEPVRGGLLDLNRYFHKAN"
BASE COUNT          767 a         1291 c         1200 g          973 t
ORIGIN      
        1 accgggccag gtggcggaga ggacgccggc aaacgtaccg ggagcggggc gcgtatcaga
       61 gcgtctcttc ggtctcccgg ggctcaccgt tgtcggtcgc gtggcacccg gaatcctccg
      121 gggcgcccag ccggagcccg aggggtacgc caccctcaag gcgatgggcg tcagaacggt
      181 gatcagcctt cgcacgaatc acggggagag gaaggcggtc gaggcagcgg ggatgcgata
      241 catcgagatc cccatcagct tgtggaagaa tgtcgacccg gcggcggtgc agaaggcact
      301 gtcggtgatg accgacccgg cgaaccagcc cgttttcgtc cactgctccc gcggggcgga
      361 tcgcatggga gtggtggcgg cggtctaccg gatggaggtc gacgggtgga gcgaagcgga
      421 ggcggaggcg gagatggagg cgttcggctt ccacgagttc tggtcacagt tcaaagagtt
      481 cgttcgccgg tacccggagg tccgcgagta aatccatccg gtgttcctca ttgctccatc
      541 ctagtcgtcc ggcagttccg tcccgacctg cggcggcgtc acctcaacca cattggagaa
      601 cggcgaatcg ccgtaggcgt tccatgcctg aacccggtag gagtaggtcg tacgaggtat
      661 gacggacccg tcgcggaagg ccgcgacatg cggccccacc tcgccgatct ccacgaatgc
      721 tctgcaaggg ctgttgcaga ctgcccgctc gatgcggaat ccgagtccgc cggccccgcc
      781 ttcggtccat gccagaatca cctggcgatc gccgacggcg accgccatca gatcgacagg
      841 cgccgcagga aggacgggaa gggaagatcg gcggatcatt tctcatcctc tccgctccag
      901 caggaattgg tcggtcccat ccaccccgtc gggcgaggaa atcaaccggc ctatagcatc
      961 tcccggaaag gatgccggac ggtaccgggg gctgtccgaa tcatgcctcg tcgtttgtcc
     1021 tgattttgga ccggtgttcg tcctatggca ggaaggggtg ccggagggtt cggatcaatc
     1081 caccagtttg ttctggatgg cgtaatgggt tatttcggcg ttgttcttca tcctcgtctt
     1141 cagcaggatg ttggtccgat agctgctgat cgtcttcgcg ctcaggcaca actccttggc
     1201 gatcgcgccg acgggtttgc cggaggcgat catgagcatc acctggtatt cccgatccga
     1261 tagaatctcg tggagaggct ttcccgagtc gttatccaac tcttccgcca ggatctgggc
     1321 gagggagcca ctgatgtatc tctcgccgtt cagcgctttc cgtatcgcga ggaccagctc
     1381 gtcacccgca cattccttcg tgaggtatcc ggaggcgcct gcgcgcatgg cccgtatcgc
     1441 aaactgctcc tccgggtgca tgctgaggat caggacgggc agcttcggcc ggtgctgttt
     1501 gatctccttc aacacttcca atccgctctt accgggcatc ttgaggtcca gtacgaccag
     1561 gtcgtatcca ctcttcaaga ccatgttcac tgtttcctgt ccgtttctcg cctcatcgac
     1621 cttgatcggg ttgagggtct ccgccagaac cttccccaat ccttttcgta cgacttcatg
     1681 atcatccgcg atcagtatct taagcattcg agatcgcccc ttttcccagg ggaatggtca
     1741 ctcccaccag ggtcccctca cccggtttcc cgctgataac ggcttcccct ccgagcagat
     1801 ggacgcgttc ccgaatcccg atgatgccaa gcgacttgga gtcgaatatc cgtctttcat
     1861 tgatcccgat gccgttgtct ctcacctcca ggatcagggt accgtccatc ttccccaggc
     1921 ccaccttcac ctccgacgcc gcggcatggc gcatgacatt cgtcagggcc tcctgaacga
     1981 tgcggaagat cgcggtggag aggacggcgt cggatatctt ctccactccc tttaccgcaa
     2041 cattgcagcg gatccccgtc cggttcctga aatccttccc caaccattcg attgcggcgc
     2101 ccacaccgag ttcatccagg atcccgggcc ggagctcggt cgcgatcttt cgcaccgtcc
     2161 ggatgatgcg gtttacagtc cgttcgagtt cctgaacttt cgcggactgc ccggcatgtc
     2221 cgccggaggc caggctcctt cttgtcagcg agagatccaa tttcaaggcc gtcaacgcct
     2281 gtcccagctc gtcgtggatt tcgcgcgaga tgcgcgccct ttcttcctcg agcagggatt
     2341 gcagacgcgc cgagagattc cgcaaccgct cgcgggattt cgtgatcctc tcctccgccc
     2401 gcttcccctc gtcgagcatc tttttcatga gtttgttcgc cgtcaacagc tcggccgtcc
     2461 gctcctccac gcgtttttcc agttccttgc tggcgttcgc caggatctgc tctacatgat
     2521 ggcgtggggt aatgtcgcgg atgttgcatt gaatcaccct cgtgccgttc tcctggtaga
     2581 cgttgctgac gaactccacg tgcttatgct gatgctcttt ggtttccagc ggcagattgt
     2641 cataacggat atattccttc cgctgcaatc tcctgaaagc gcccttgctg gcggtgatat
     2701 ccctgaaggg gccgatttcc cagagcatct tgccgagcag ttcggtgcga gaatacccca
     2761 gcagttcctg aaggtagggg tttgcgtcgg tgatccgtcc cgtggccgca tccaggatga
     2821 ggatgccgtc ttttgccgtc tcgaagagcc gccggtagcg aatctcggaa accttcagcg
     2881 cttcctcgat ccgcttgcgt tcggcgatgt cactctccgg cagccccccc ctcttgccgg
     2941 agggccggtt ggccgacttg tcttccggtt cggccaggcg cgcccgtgcg acgggattct
     3001 ccgccttaag gtgtgatttc gttttgggtg gcatcgacac ctccaagctc aggtgtattt
     3061 tcccgtctat tgccgatcat gtgcaactat tcagtttgct ttatgaaagt accggttcag
     3121 gtccagcagt ccccctctga ccggttcatc ctcgtcgaac cttttctgaa accagtcata
     3181 cgtttcccaa aatcggttat cggaccgact gatcccgtat tttgccagtc ttgccatgct
     3241 ggtttcgctt ttatcaaaga aatttatcag gttaataaag tcagggatat cgtcttggcg
     3301 gatgtcgaaa aacagattcg gataggaccc gatcatcccc gggataaaat ccagatcatc
     3361 tttcaaagga tccaaccgtt tatcctcccc caacaggaag gccacattgt tatgccagcg
     3421 atttataaca agcgtggcga cgacatcctt cccgttcttg aggcgtatcc tcatataggc
     3481 aaggttcgcg ttatggtcgt tggcgagggc gacaaacggt gtgcccgggc gtgaaacggc
     3541 ccggaatcct tgcaggtaat cttcggggga ttcatagttc aaagggatcg ccggataatc
     3601 ctccccggat ctgatgtagt tgatcttgtc gaacgtgatc gccgtttcct tgttgatctc
     3661 gctcgtaaca agatgttcga caaactcgcg cttggggtcg ggtgtcgcga aacggattcc
     3721 cgacggcagc gcgccctggt ggtagtccat cttctccaga tccgtatcca ggtaccacga
     3781 ctgcatgatc tctttccgcg tctccggggg gagaaaatcg aggaaatagc tttccccctc
     3841 gatccggagc ctgtccatgt agagccgttc gaccaactgg tgacctaccg ttccgtagac
     3901 atcgaacccg gcgacgaggg catagtaaac acgttccagg agcgggtaat cgatcaccca
     3961 gagggtcttc ggcagattcc ccaacgcccc cttgtgtacg gaagcgctgt cgaaatgacg
     4021 gtataccgtc agcaacggcg catcggatgc gcggttcccc ttccagatcg cgtcgtaacc
     4081 gaggccgctg taatgcaacg ccgcgtaggt atcctgccgg gccttgtaat actcgatcgc
     4141 gaacttcttg tgcttgtccg tcagggcgga gaacagtccg gggtcgctcc ccatctcgat
     4201 cggcatggcg agcctgtcgc cgtgaagctt c
//
LOCUS       DATGYW010000441         1568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_506006, whole genome shotgun sequence.
ACCESSION   DATGYW010000441 DATGYW010000000
VERSION     DATGYW010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_506006"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..562
                     /locus_tag="VK429_06155"
     CDS             <1..562
                     /locus_tag="VK429_06155"
                     /inference="COORDINATES: protein motif:HMM:NF014244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HLN91428.1"
                     /translation="VTLNPFPHIDPFGTVLLPAIMLLLGTGMVFGWAKPVPVNFRLLR
                     DQKRDPIYVAAAGVVTNLCLAALSGLLFRLLTAIDPALLLEAMSHGAAPLSDTPARAI
                     LVPLTLMCVVSVQFNVLLAIFNLIPIPPLDGGRIAVGLLPAGPSMALASVERYGTLIL
                     LLLLMVGPLGIIWRFVDMIATFILGG"
     gene            602..1567
                     /gene="trpS"
                     /locus_tag="VK429_06160"
     CDS             602..1567
                     /gene="trpS"
                     /locus_tag="VK429_06160"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004511884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HLN91429.1"
                     /translation="MSGMRPSGKLHLGHYLGVLVNWKKLQEENECFFFVADWHALTTE
                     YDRSSVIRESIDDMVVDWLASGIDPQKATIFIQSHVPEHAELHLLLSMITPLPWLERN
                     PTYKEQLREQTTRDLQTYGFLGYPVLQAADILMYDATRVPVGIDQVPHLELTREIARR
                     FNFLYKESLTIPEAYLTETSKMMGTDNRKMSKSYGNAILLSDTAEEVWGKVKTMVTDP
                     ARQRRTDCGNPDICNIFSYHKIFSDEATIAKVDAGCRSAGIGCIECKKWMFEGMEKVL
                     APVREKRRQIVESGVSVRDILADGTRRAREVAGAKMAEVRDAVRI"
BASE COUNT          274 a          548 c          482 g          264 t
ORIGIN      
        1 ggtgacgctc aacccgtttc cccacatcga tccgttcgga acggtcctcc tccccgccat
       61 aatgctcctg ctgggcacgg ggatggtgtt cggctgggcc aagccggtcc ccgtgaattt
      121 ccgcctcctg cgcgaccaga agcgggaccc catctacgtc gccgccgcgg gggtcgtcac
      181 gaacctctgc ctggccgccc tctccgggct cctcttccgc ctcctcaccg ccatcgaccc
      241 ggccctgctg ctcgaggcga tgtcgcacgg cgccgccccc ctgtcggata ccccggcccg
      301 cgccatcctg gtccccttga cgctcatgtg cgtcgtctcg gtgcagttca acgtgctgct
      361 ggccatcttc aacctgatcc cgatcccccc cctggacggc ggacggatcg ccgtcggtct
      421 gctcccggcg ggcccctcga tggcgctggc gtccgtcgag cggtacggca cgctgatcct
      481 tcttctgctt ctcatggtcg gcccgcttgg tataatctgg cggttcgtcg acatgatcgc
      541 gacattcatc ctgggcggat aacccaccac cgacggaggc gaggcgttgc ggaaacgggt
      601 cttgagcggc atgcggccga gcgggaagct ccacctgggg cactacctcg gggtcctggt
      661 caactggaag aagcttcagg aggagaacga atgcttcttc ttcgtcgccg actggcacgc
      721 gttgaccacg gagtacgacc gctccagcgt catccgcgag agcatcgacg acatggtcgt
      781 cgactggctc gcctccggga tcgatccgca gaaggcgacg atcttcatcc agagccacgt
      841 ccccgagcac gccgagctgc acctgctcct ctccatgatc acgccactgc cgtggctgga
      901 gcgcaacccg acctacaagg agcagctccg ggagcagacc acgcgcgacc tgcagacgta
      961 cggcttcctc ggctacccgg tcctccaggc ggccgacatc ctgatgtacg acgccacgcg
     1021 cgtccccgtc ggcatcgacc aggtcccgca cctcgaactc acccgcgaga tcgcccggcg
     1081 gttcaacttc ctgtacaagg agagcctgac gatccccgag gcgtacctga ccgaaacgtc
     1141 gaagatgatg gggaccgaca accggaagat gagcaagagc tacggcaacg cgatcctcct
     1201 ctccgacacg gcggaagagg tgtggggcaa ggtgaaaacg atggtcacgg atccggcccg
     1261 ccagcggcgc accgactgcg ggaacccgga tatatgcaac atcttctcct accacaagat
     1321 cttttccgac gaggcgacga tcgcgaaggt cgacgcgggg tgccgatccg ccggcatcgg
     1381 gtgcatcgag tgcaagaagt ggatgttcga agggatggag aaggtcctcg cccccgtccg
     1441 cgaaaagcgc cggcagatcg ttgaaagcgg agtttccgtg cgcgacatcc tggccgacgg
     1501 cacccgccgc gcgcgggagg tggcgggcgc caaaatggcg gaggtccggg acgctgtccg
     1561 gatctgac
//
LOCUS       DATGYW010000442         3584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_308194, whole genome shotgun sequence.
ACCESSION   DATGYW010000442 DATGYW010000000
VERSION     DATGYW010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3584
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308194"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..835)
                     /locus_tag="VK429_06165"
     CDS             complement(8..835)
                     /locus_tag="VK429_06165"
                     /inference="COORDINATES: protein motif:HMM:NF039473.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6502 family protein"
                     /protein_id="HLN91430.1"
                     /translation="METKIERAISAAVTNILRPLVRLLLRNGVPYRTFSDIAKRVYVD
                     VATEEFCIPGRKQSKSRVSILTGLSRKEVLRVRRLPATDDLGAGARYNRAARVIAGWV
                     RDRRFRDGSGNPGELPFEQGAASFRNLVKTYSGDAPARAVLDELLRVGTVQRTPGGKI
                     RLLERSYVPKTGEIDKIGILGVDASDLIATIDHNIRQPGTPFFQRKVCYDNLPMEVLP
                     GLKKKAADRGQALLESLDRWMSARDRDVNPTVPGTGRKRAGIGIYYFQENYREGGEA"
     gene            931..2181
                     /locus_tag="VK429_06170"
     CDS             931..2181
                     /locus_tag="VK429_06170"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015774309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HLN91431.1"
                     /translation="MTPMKTHLPQGSVGFVETKRFTFAEPPHEMPLDIGGKLGPITLA
                     YETYGKLNREKNNAVLVQHAFSGSAHAAGFLPGQDPSKEKPGWWDYLIGPGRALDTEK
                     YFVLCSNVIGSCYGSTGPSSVDPKTGRPYGLSFPVVTIGDMVRAQAHLLDHLDIERLL
                     AVIGGSMGGMQALQWAVDYPDRVASAIPIATTSRHSPQQIAFNHVGRAAILADPEFHE
                     GDYYGWRTVPERGLSVARMVGFITYLSDRKMHEKFGRMKQLAAAKVSGRQGKWAEGTI
                     GQHSSIEFSVEGYLKHQGEVFVFDRRFDANSYLCITKAIDIFDLSGASGRLAKAFENV
                     KSKFLIISFDTDWLYPTYQSQEIRNAILQNGLAVACLELSTIHGHDAFLIENEKPPEG
                     GKPGVKNKMIQVVRDFLGNVAARP"
     gene            2208..3092
                     /locus_tag="VK429_06175"
     CDS             2208..3092
                     /locus_tag="VK429_06175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011940689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HLN91432.1"
                     /translation="MPKKIVLSFLVVLLAAGLSACSVMQSTYQKKADEADTLTKRLAA
                     LQKNHDDLIAENAVLKSDLARMTLQNEKMTTDLSYVTDQRDKAIEEKEELDRILRSRS
                     DSLSQNISELRRRVDDLESENRKLKAENASLVKAREEQVQKVSSIYESLLEKMKSEIS
                     QGQVTISELKGKLTVTMVDAILFDPGKAEVKKGGREILGKIASILKDLSDKSIRIEGN
                     TDNVPISRALAQRYPTNWELSAARAINVTRFLQEQGIDPGNLSAVAYGEWKPVATNDT
                     AEGKAKNRRIEIVLVPKE"
     gene            3114..>3584
                     /locus_tag="VK429_06180"
     CDS             3114..>3584
                     /locus_tag="VK429_06180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010246726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HLN91433.1"
                     /translation="MIRKALLLKFLDAAYMQRWNDKIRPVELIELDKQAHKMIVAWFL
                     ARVEEDRGTPVNWTRLIEGGLFELLQRIVITDLKPQIFYKIKADTKRYRQLNEWVYGE
                     LRPLISPLGKAFCRRYQDHFLESEDTVERRILTAAHFYATRWEFLIVERANPGGY"
BASE COUNT          709 a         1098 c         1171 g          606 t
ORIGIN      
        1 acgggcatca tgcctctccc ccctcccggt agttttcctg gaaatagtag atgccgatcc
       61 cggccctttt ccttcccgta ccgggaacgg tgggattgac gtcccggtcc cgggcgctca
      121 tccaccggtc cagggattcc agcaaggctt gtccccgatc cgccgccttc tttttcaaac
      181 cggggagcac ctccatgggg aggttgtcgt aacagacctt cctctggaaa aacggggtgc
      241 cgggttgacg gatgttgtgg tcgatggtcg cgatcaggtc cgacgcgtcg acgccgagaa
      301 ttccgatctt gtcgatttcg ccggtcttcg ggacatacga ccgttcgagc agccggatct
      361 ttccgcccgg tgtccgttgg acggtcccca cccgcagcaa ttcgtcgagc accgcccggg
      421 cgggggcatc cccgctgtac gtctttacga ggttccggaa ggacgcggct ccttgctcga
      481 acggcagctc gcccgggttt cccgaaccgt cgcggaaccg gcggtcccgg acccagccgg
      541 cgatcacgcg cgcggcccgg ttgtagcgcg cgccggcgcc caggtcgtca gtggcaggga
      601 ggcgcctcac gcgcagcacc tctttccggg agagcccggt gaggatggaa acccgggact
      661 tggactgttt ccgccccggg atgcagaatt cctccgtggc gacatcgacg tagacccgct
      721 tcgcgatatc ggaaaacgtc cggtagggga cgccgttcct caggagaagc cggacaagag
      781 gccggagtat gttcgtgacg gccgcggaga tggccctctc gatctttgtt tccatattgg
      841 gaaaattatc ccaaattcat cgtcctgtca atccccgtat tcgatcgccg tccatccctc
      901 tgcgcgtttt cgaaggaatc ttttggtatc atgaccccca tgaaaacgca ccttccgcaa
      961 ggttccgtcg gattcgtcga gacgaagcgg ttcaccttcg ccgagccgcc ccacgagatg
     1021 cccctcgaca tcggcgggaa actcgggccc atcacgcttg cctacgagac gtacgggaag
     1081 ctcaaccggg agaagaacaa cgccgtcctg gtgcagcacg ccttctccgg gagcgcgcac
     1141 gccgccgggt ttcttccggg gcaggacccc tcgaaggaga agccggggtg gtgggactac
     1201 ctgatcgggc cgggccgcgc gctggatacg gagaaatatt tcgtcctctg ctcgaacgtg
     1261 atcgggtcgt gctacggcag cacggggccg tcctcggtcg acccgaaaac gggaaggccg
     1321 tacgggctgt cgttccccgt ggtgacgatc ggcgacatgg tgcgggcgca ggcgcacctt
     1381 ctcgaccacc tcgacatcga gcgtctgctg gcggtcatcg gcgggtcgat gggggggatg
     1441 caggcgctcc agtgggcggt cgactacccg gaccgcgtcg cgtcggccat cccgatcgcg
     1501 acgacctcgc gccactcgcc gcagcagatc gcgttcaacc acgtcggccg ggcggcgatc
     1561 ctggccgatc cagagttcca cgagggcgac tactacggat ggaggaccgt cccggagcgc
     1621 ggcctgtccg tggcgcggat ggtggggttc atcacctacc tctcggaccg gaagatgcac
     1681 gagaagttcg gccggatgaa acagctcgcc gcggcaaagg tgagcgggcg gcaggggaag
     1741 tgggccgagg ggacgatcgg gcagcactcc tcgatcgaat tttcggtgga agggtacctg
     1801 aagcaccagg gggaagtctt cgtcttcgac cgccggttcg acgccaactc gtacctgtgc
     1861 atcacgaagg cgatcgacat cttcgacctc tccggggcct cgggacgact ggcgaaggcg
     1921 ttcgagaacg tgaagtcgaa gttcctcatc atctccttcg acacggactg gctctacccg
     1981 acataccagt cgcaggagat ccgcaacgcg atccttcaga acgggctcgc cgtggcgtgc
     2041 ctcgagcttt ccacgatcca cgggcacgac gcgttcctca tcgaaaacga gaagcccccc
     2101 gaggggggca agcccggggt gaagaacaag atgatccagg tggtccggga tttcctcggc
     2161 aacgtcgccg cgcgaccgtg aaggctgttg agagaaggag ggtcgtgatg ccgaaaaaaa
     2221 tcgtcctctc gttcctggtc gtgctgctgg cggcaggctt gtccgcctgc tcggtgatgc
     2281 agtccaccta ccagaaaaag gcggacgagg cggatacgct cacgaagcgc ctcgccgcgc
     2341 tgcagaagaa ccacgacgac ctcattgcgg agaatgccgt gctcaagtcc gacctggcga
     2401 gaatgacgct ccagaatgaa aagatgacca ctgacctgtc ctacgtcacc gaccagcggg
     2461 acaaggccat cgaggaaaag gaggagcttg acaggatcct gcggtcgaga tccgacagcc
     2521 tctcgcagaa catctccgag ctgcgcagga gggtcgacga tcttgaatcg gaaaacagga
     2581 aactcaaggc ggagaacgcg agcctggtga aggccaggga ggagcaggtc cagaaagtca
     2641 gctcgatcta cgagagcctg ctcgaaaaga tgaagtcgga gatctcccaa gggcaggtga
     2701 cgatctcgga gctcaagggg aagctgacgg tcaccatggt cgacgcgatc ctcttcgacc
     2761 cggggaaggc cgaggtcaag aagggcgggc gcgaaatcct cggaaagatc gcatcgatcc
     2821 tgaaggactt gagcgacaag tcgatccgga tcgaagggaa cacggacaac gtgccgatca
     2881 gccgcgccct cgcgcagcgg tatccgacga actgggaact ctccgcggcg cgggcgatca
     2941 acgtcacgcg gtttctgcag gagcagggga tcgatcccgg gaatctttcg gccgtcgcct
     3001 acggggagtg gaagccggtc gccaccaacg acacggcgga ggggaaggcg aagaaccgga
     3061 ggatcgagat cgtccttgtg ccgaaggaat aggagcgccg ggaggccgcg cggatgatcc
     3121 ggaaagcgct gctgctgaag ttcctcgacg ccgcctacat gcagcgctgg aacgacaaga
     3181 tccggccggt cgagctgatc gagctcgaca agcaggcgca caagatgatc gtcgcctggt
     3241 tcctcgcgcg ggtcgaggag gatcgcggga cgccggtcaa ctggacccgg ctcatcgagg
     3301 gggggctctt cgagctcctc cagcggatcg tgatcaccga cctgaagccg cagatcttct
     3361 acaagatcaa ggcggacacg aagaggtacc ggcagttgaa cgagtgggtt tatggggagt
     3421 tacggcccct gatctcgccc ctcgggaagg cgttctgccg gaggtaccag gaccactttc
     3481 tcgaatcgga ggacacggtg gagcggcgga tcctcaccgc cgcccacttc tacgcgaccc
     3541 ggtgggagtt cctgatcgtc gagcgcgcga accccggcgg gtac
//
LOCUS       DATGYW010000443         2467 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_308239, whole genome shotgun sequence.
ACCESSION   DATGYW010000443 DATGYW010000000
VERSION     DATGYW010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2467
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308239"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(183..887)
                     /locus_tag="VK429_06185"
     CDS             complement(183..887)
                     /locus_tag="VK429_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014795191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN91434.1"
                     /translation="MLKVSGINVFYGDLQVIWDVSFEVREKEILVLVGANGAGKSTTL
                     KTISGLLKPRMGSIEFDGVRLDQLSPDKVIGQGVVHVPEARRLFREMSVEENLIMGSL
                     SPDAKKKRYETMEWVYELFPRMKERRKQAAGTLSGGEQQMCAIGRGLMALPKIMMFDE
                     PSLGLSPILVQEVFEIAKRINREGVTVMLVEQNVRQTLAMCDRAYVLENGRVVLEGTG
                     KTLMDNPHVKEAYLGI"
     gene            complement(880..1599)
                     /locus_tag="VK429_06190"
     CDS             complement(880..1599)
                     /locus_tag="VK429_06190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007781623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN91435.1"
                     /translation="MAYFRVEKLVKKFGGLMAVNEVTFDVEKGEIFGLIGPNGSGKTT
                     TFNMISGVYPPTSGRVLYRDREIQGMKSHRICHLGIGRTFQVVKPLGRMTVLDNVIAA
                     SFSRVNSMREARSTALRTVEFCGLSPVQEVLAKSLPIAGRKRLEIARAMATRPELLLL
                     DETAAGLNPTELVEAIELIRKIRENGTTVIIIEHIMHVIMTISDRIHAINFGQTIAEG
                     TPKEVAANPAVIEAYLGTDYA"
     gene            complement(1610..>2467)
                     /locus_tag="VK429_06195"
     CDS             complement(1610..>2467)
                     /locus_tag="VK429_06195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011697186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN91436.1"
                     /translation="TGQVSFGHAAFFGVGVYTAGLLFQHLQVSPWWGMAFGGIIAMLI
                     GLPFGAICFPLRGAYFALASLALGEGIRHVATIAENFTGGMVGIMIMPTFTSKVPYYY
                     IALGLAILSVASIQAVINSKPGYYFVSIREDQDAAASLGINTTLYKNISLAISAFWTG
                     MAGALYMNYMGFIDPHVVFSLHDYSVMAILVAIVGGVGTIYGPTIGAFIMVAFQEFFR
                     TGFFGLFDYLGKATGSSAFTTLSGAIHQAHVLGFGILVIVVILYLPNGVVGDWEKIKR
                     NVFRINPAR"
BASE COUNT          445 a          815 c          753 g          454 t
ORIGIN      
        1 cgatcgcccc gtcgatcgcc gaggtcgccc cgccgggccg cttcgccccc tcgaacaggt
       61 tcaccaccag catgtccgcc ttgaccgcgc ggatatctcc gaaaacagaa tcgatgcgca
      121 tcgttttatc ccctgggacc gatcgttgac cgttgatgat cctacggacg cattcgcgct
      181 gttcagatgc cgagatacgc ctctttgacg tgggggttgt ccatgagggt cttgccggtc
      241 ccctccagaa cgacccgtcc gttttcgaga acgtaggcgc ggtcgcacat ggcgagggtc
      301 tgccggacgt tctgctccac cagcatgacc gtgaccccct ctctgttgat ccgcttcgcg
      361 atctcgaaga cctcctgcac gaggatgggg gaaagcccaa gcgacggctc gtcgaacatc
      421 atgatcttcg gcagcgccat cagcccccgc ccgatcgcgc acatctgctg ctcccctccg
      481 ctcaacgtcc cggcggcctg tttcctccgc tccttcatcc gcgggaagag ctcgtacacc
      541 cactccatcg tctcgtaccg cttcttcttc gcgtcggggg agagggagcc catgatgagg
      601 ttctcctcga cggacatctc gcggaacagg cgacgcgctt cggggacgtg aacaaccccc
      661 tggccgatga ccttgtccgg tgaaagctgg tcgaggcgga cgccgtcgaa ctcgatggac
      721 cccatccggg gcttgaggag gcccgagatc gtcttgaggg tggtcgactt ccccgcgccg
      781 ttggccccca cgaggaccag gatctccttc tcgcgcacct cgaaggagac gtcccagata
      841 acctggaggt ccccgtagaa cacattgatg ccggatacct taagcatagt ccgtccccag
      901 gtacgcctcg atcaccgccg gattcgccgc cacttccttc ggcgttccct cggcgatcgt
      961 ctgcccgaag ttgatcgcgt ggatccggtc ggagatggtc atgatcacgt gcatgatgtg
     1021 ctcgatgatg atgacggtgg ttccgttctc acggatcttc ctgatgagtt cgatggcctc
     1081 gacgagttcg gtggggttca gccctgcggc cgtctcgtcg aggaggagga gctccggccg
     1141 ggtggccatc gcccgcgcga tctcaagccg cttgcgtccc gcgatcggca gggacttggc
     1201 gagcacctcc tggaccgggg agagcccgca gaactccacc gtccggagcg cggtgctgcg
     1261 cgcctccctc atggagttca cccgggagaa ggaggcggcg atgacgttgt ccagcacggt
     1321 catcctcccc aggggcttga ccacctggaa ggtcctgccg atccccaggt ggcagatccg
     1381 gtgggacttc atcccctgga tctcccggtc ccggtagagc accctgcccg acgtcggagg
     1441 gtacactccg ctgatcatgt tgaacgtcgt ggtcttcccg gagccgttgg gaccgatcag
     1501 gccgaagatc tcgcccttct ccacgtcgaa ggtcacctcg ttgaccgcca tcaggccgcc
     1561 gaatttcttg acgagttttt ccacccggaa gtacgccacg accgtctcct tatctcgccg
     1621 ggttgatgcg gaacacgttc cgcttgatct tctcccagtc gccgacgacg ccgttgggca
     1681 ggtacaggat gaccacgatg accaggattc cgaacccgag cacatgcgcc tggtggatcg
     1741 cgccggacag ggtggtgaag gccgaggatc ccgtcgcctt ccccaggtag tcgaagaggc
     1801 cgaagaaccc cgtccggaag aactcctgga aggccaccat gatgaacgct ccgatcgtgg
     1861 gcccgtagat cgttcccacg ccgcccacga tggcaacgag gatcgccatc acggagtagt
     1921 catggaggga gaagaccacg tgaggatcga tgaaccccat gtagttcatg tacagggcgc
     1981 ccgccatccc ggtccagaag gcggagatcg cgagggagat gttcttgtac agcgtcgtgt
     2041 tgatccccag actcgccgcc gcgtcctggt cctcccggat ggagacgaag tagtaccccg
     2101 gcttggagtt gatgaccgcc tgtatgctcg cgacgctgag gatggccaac cccagggcga
     2161 tgtagtagta gggaaccttc gaggtgaacg tgggcatgat catgatcccc accatcccgc
     2221 cggtgaaatt ctccgcgatc gtggcgacgt gccggatccc ctccccgagg gcgagcgacg
     2281 ccagcgcgaa gtacgctccc cgcaggggga agcagatcgc gccgaaaggc agcccgatca
     2341 gcatggcgat gatccccccg aaagccatcc cccaccaggg ggagacctga aggtgctgga
     2401 acaggaggcc cgccgtgtag acgccgacgc cgaagaaggc cgcgtggccg aaggagacct
     2461 gcccggt
//
LOCUS       DATGYW010000444         1513 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_308299, whole genome shotgun sequence.
ACCESSION   DATGYW010000444 DATGYW010000000
VERSION     DATGYW010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308299"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1406)
                     /locus_tag="VK429_06200"
     CDS             complement(<1..1406)
                     /locus_tag="VK429_06200"
                     /inference="COORDINATES: protein motif:HMM:NF013528.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HLN91437.1"
                     /translation="MDVITTHLNADFDTIASMLAACKIYPEAVCVLPGSQEETVKGFL
                     VQSAFYNLPMRKPREIDLDKVTRLILVDIRSRGRIGIFGELIGRPGVPVHVYDHHPDE
                     DSDVKGDVEVIRRVGSTTTILVQILMERGIPITADEATVMMLGIYEDTGSLGFPSTTV
                     DDYLAAAHLLSCGAKLSQVADILARDLTSGQISLLYDLIQGSRTYSIRGVQVVIAEAR
                     REEYVGDLALLVHKLRDMEAVSVLFVICQMGDRVVLVGRSRKPEVDAAAVMREFGGGG
                     HAYAASASVKDATTFQVREKILRVLEEKVIPRRSAADVMVSPARTVDAGETILEVHQA
                     LTRSNINAVPVMRSGAVVGILTRQVVEKAVYHGLGGERAGEYMNADYETAAPETQIER
                     IEEIIIGKNQRLVPVVRGKELLGVITRTGLLRFLYDMRDVELPGEGGDVDAEGAMAPR
                     KNVANLMRDRLPARVLDLL"
     gene            complement(1414..>1513)
                     /locus_tag="VK429_06205"
     CDS             complement(1414..>1513)
                     /locus_tag="VK429_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017472243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HLN91438.1"
                     /translation="MLGHADIATTQIYTHITPERLRDIHRKHHPRA"
BASE COUNT          234 a          537 c          482 g          260 t
ORIGIN      
        1 agcaggtcca gaacgcgcgc cgggagccga tcccgcatca ggttcgccac gttcttgcgc
       61 ggagccatcg ccccttccgc atcgacgtcc cccccttcgc cgggaagctc cacgtcccgc
      121 atgtcgtaga ggaagcgcag gagccccgtc cgggtgatga ccccaagcag ttccttccca
      181 cgcaccaccg ggaccagccg ctggttcttt ccgatgatga tctcctcgat ccgctcgatc
      241 tgcgtttcgg gcgccgccgt ctcgtagtcg gcgttcatgt actcccccgc ccgctccccg
      301 cccaggccgt ggtagacggc cttctccacc acctgccggg taaggatccc gaccaccgcg
      361 ccgctccgca tcaccggaac ggcgttgatg ttggagcggg tgagcgcctg gtgcacttcg
      421 aggatcgtct cccccgcatc cacggtgcgc gcgggggaca ccatcacgtc cgccgccgag
      481 cgcctgggga tcaccttctc ctccagcacg cggagaatct tctcccgcac ctggaacgtc
      541 gtcgcgtcct tcacggaggc cgaggcggcg taggcatgcc cgccgccgcc gaactcgcgc
      601 atcaccgcgg ccgcgtccac ctccggcttc cggctgcggc ccaccagcac cacccgatcc
      661 cccatctggc agatgacgaa gaggacgctc accgcctcca tgtcgcgcaa tttgtggacg
      721 aggagcgcca ggtcccccac gtactcctcc cgccgcgcct ccgcgatcac cacctggacc
      781 ccgcggatcg agtacgtacg cgaaccctgg atcaggtcgt acagcaggga gatctgaccg
      841 gaggtcaggt cccgggcgag aatgtcggcc acctgggaga gcttcgcacc gcacgagagc
      901 aggtgcgccg ctgcgaggta gtcgtccacc gttgtcgaag ggaagccgag cgagcccgtg
      961 tcctcgtaga tcccgagcat catcaccgtc gcctcgtccg ccgtgatcgg gatcccccgt
     1021 tccatgagga tctggacgag gatcgtggtg gtcgaaccga cgcgccggat cacctcgacg
     1081 tcgcccttca cgtcggagtc ctcgtcggga tggtggtcgt agacgtggac cgggacgccc
     1141 gggcggccga tcagttcccc gaagatcccg atgcggcccc ggcttcggat gtcgaccagg
     1201 atcaggcgag tcaccttgtc gaggtcgatt tcgcggggct tgcgcatcgg cagattgtag
     1261 aaggcggact ggacgaggaa ccccttgacc gtctcctcct gcgacccggg caggacgcag
     1321 accgcctcgg ggtagatctt gcacgccgcc agcatcgacg cgatcgtgtc gaagtccgcg
     1381 ttcaggtggg tggtgatgac gtccatggtg cggctacgcc cgggggtggt gcttgcggtg
     1441 gatgtcccgc agccgctccg gggtgatgtg cgtatagatc tgcgtggtcg cgatgtcggc
     1501 gtggccgagc att
//
LOCUS       DATGYW010000445         2072 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_82451, whole genome shotgun sequence.
ACCESSION   DATGYW010000445 DATGYW010000000
VERSION     DATGYW010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82451"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(67..1962)
                     /locus_tag="VK429_06210"
     CDS             complement(67..1962)
                     /locus_tag="VK429_06210"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HLN91439.1"
                     /translation="MKRKLAAILCAGAEGYSRLMGEDESGTLTTLKAHLQFIGSLVEK
                     HQGRVAAIHGDSLLAEFESVVDAVQCAVEIQTELKGRNEKEPEGSRMPFRIGVNLGDV
                     IQEGGNVYGDGVNVATGLKGLADPGGICISRSVHDNVKNKISVGYQSLGAHSVTNIAE
                     PVQVYRILPEPDAFGKAIGKAWYRLKQWQKVAFTLAVALLPVVANLVVKKYIDPTISS
                     PGIFSFFTEKTALPLPDNPSIAVLPFENMTGDPKQEYFTDGFTEEIITSLSKISSLFV
                     ISRNSSFTYKGKPVKLKKVSKELGVRYVLEGSFQKSGDRVRINAQLIDAISDQHLWAD
                     HYDRDMKDIFSLQDEIIFKILTALQVNLTSGEQARVWAKGTKNLEAYLNLMQVREILQ
                     GNVAGNARARQLIEETIALDPHYAQAFMFMGATHFQDFLYNMMALNKTTKSPKESLAQ
                     AIEWTQKALSMDDSLAEAHARLGHLYSLSLRHEESIVEVDKAMAMDPNSAVVHNYACI
                     IYRVAGKPAEAIPMCKKAIRLEPFAPGNYYANLGMAFFQNGTDCEEAVKACEKALKLA
                     PEGMMIHIWATTVFSACGREKEARKTAKELLRINPKFSVEAYTKRIPQHQKDKDRIAE
                     ALRKAGL"
BASE COUNT          368 a          637 c          589 g          478 t
ORIGIN      
        1 gggtgactcg aacgcccggc caaaggttta ggatccgtgg gcccatgaag ggtccttttc
       61 ctctcgctac agtcccgcct tgcgaagagc ttcggcaatc cggtccttgt ccttctggtg
      121 ttgcgggatc cttttggtat aggcctccac cgaaaatttc gggttgatcc ggagtagctc
      181 ctttgccgtt ttccgtgctt ccttctccct gccgcacgcg ctgaagacgg tggtcgccca
      241 tatgtgtatc atcatcccct cgggcgcgag tttgagcgcc ttttcgcacg ccttgacggc
      301 ttcctcgcaa tcggttccgt tctggaaaaa agccattcct aggttcgcat agtaattgcc
      361 gggggcgaag ggctcgaggc ggatcgcctt cttgcacatc gggatggctt ccgccggctt
      421 tccagcgact cggtagatga tgcacgcata attatgcact accgcggaat tggggtccat
      481 cgccatggcc ttgtccacct cgacgatgct ttcttcgtgc cggagggaca acgaatagag
      541 atggcccagc cgggcgtggg cttccgccag cgagtcgtcc atggacagcg ccttctgcgt
      601 ccattcgatc gcctgcgcca gggattcctt gggggatttg gtcgtcttgt ttaaggccat
      661 catgttgtac aaaaaatcct gaaagtgggt cgcgcccatg aacatgaagg cttgcgcata
      721 gtgcgggtcc agggcgattg tttcctcgat caactgccgg gcccgggcgt tgcccgccac
      781 attcccctgg agaatctccc gcacctgcat gaggttcagg taggcttcca ggttcttcgt
      841 ccctttcgcc cacacccggg cctgctcgcc gctggttagg ttcacctgca atgccgtcag
      901 gatcttgaag atgatttcat cctgcagcga gaagatatcc ttcatgtcgc ggtcgtagtg
      961 gtcagcccac aggtgttgat cggagatcgc atcgatcaac tgggcgttga tccgcacccg
     1021 gtcgcccgat ttctggaagc tcccctccag cacataccgg accccgagct ccttgctcac
     1081 cttcttcagc ttcaccggct tccccttgta ggtgaacgac gagttccggg agatgacgaa
     1141 cagggaggag atcttcgaca gggacgtgat gatctcttcg gtgaacccgt ccgtgaaata
     1201 ctcctgcttc gggtcgccgg tcatgttctc gaacggaagc acggcgatgg aagggttgtc
     1261 cggcagcggc aaggccgtct tttccgtaaa gaaggagaaa atcccgggag aggagatcgt
     1321 cgggtcgata tatttcttga ccaccagatt cgcgaccacc ggcagaagtg ccaccgcgag
     1381 agtaaacgct actttctgcc actgcttgag ccggtaccag gccttcccga tcgccttccc
     1441 gaacgcgtcc ggctccggca ggatgcgata cacctggacc ggttccgcga tgttcgtgac
     1501 gctgtgcgcc cccagggact gatacccgac gcttatcttg ttcttcacat tatcgtggac
     1561 gctccgggag atgcagatgc ctcccgggtc ggccagcccc ttcagaccgg ttgcgacgtt
     1621 gaccccgtcc ccgtagacgt tccctccttc ctggatcaca tccccgaggt tgaccccgat
     1681 ccggaagggc atccgggacc cttccggctc cttttcgttc ctccccttca gctcggtctg
     1741 tatttccacg gcacactgca ccgcgtccac cacgctttcg aactcggcaa ggaggctgtc
     1801 gccgtgaatc gccgcaacac gcccctggtg cttctcgacg agggagccga tgaactggag
     1861 atgggctttc agggtggtaa gggtcccgga ttcgtcctct cccatgaggc ggctgtaccc
     1921 ttcggcaccc gcgcacagga tggccgcgag cttccgcttc ataattggag atatagggga
     1981 aattgttcga gagcccgcat cgtgcctccc caactgcctg ggtggtgctg cgatcgtctc
     2041 gaggaagcac aaataaacgc tgtagggcga at
//
LOCUS       DATGYW010000446         2202 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_185964, whole genome shotgun sequence.
ACCESSION   DATGYW010000446 DATGYW010000000
VERSION     DATGYW010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2202
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185964"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..662
                     /locus_tag="VK429_06215"
                     /pseudo
     CDS             63..662
                     /locus_tag="VK429_06215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934959.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
     gene            674..1174
                     /locus_tag="VK429_06220"
     CDS             674..1174
                     /locus_tag="VK429_06220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91440.1"
                     /translation="MEQLSSALTVVHLLAVIAWLGGMIFHIVVLDPVFRKNEVSFQSA
                     YLLALMEGRFRKLVGTSIALLLASGAAKAYLMLGTTDALLHTREGRYVLLKAGLTAAM
                     LVIFAVCPKTKSCSPIPGVCDVASEGILAGKMDGTIRERSKVILPKVALGLGVAALVA
                     AVLLRG"
     gene            complement(1176..1580)
                     /locus_tag="VK429_06225"
     CDS             complement(1176..1580)
                     /locus_tag="VK429_06225"
                     /inference="COORDINATES: protein motif:HMM:NF033749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
                     /protein_id="HLN91441.1"
                     /translation="MFEWTERWSVGVDTIDAQHRELFAAINSLLREEGMPAPRDLAKV
                     LDFLEEYVNNHFGLEELYMRRLSYPGFPSHKGEHVAFINDFYDLRDEYDANGATPELA
                     DKMGRYMGDWLVNHIGKVDKALGAFLQEKARK"
     gene            complement(1593..1817)
                     /locus_tag="VK429_06230"
     CDS             complement(1593..1817)
                     /locus_tag="VK429_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013622913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HLN91442.1"
                     /translation="MESGHVALAITGMTCGHCVAAVKKALAAVPGVEAVEVTLSPPRA
                     VVSCDPSRTTVEMLLKATAEEGYPSTPAAG"
     gene            1886..>2202
                     /locus_tag="VK429_06235"
     CDS             1886..>2202
                     /locus_tag="VK429_06235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009180748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HLN91443.1"
                     /translation="MTENGTILVTGATGYVGARLVTRLLAKGYRVRASGRSLGRLRKH
                     PCANRPGVELFPADALDPASIAKACEGCAAAYYLVHSMMPGGGEFEEKDREAAQNMAR
                     AAT"
BASE COUNT          376 a          721 c          718 g          387 t
ORIGIN      
        1 ctgatcgggc tctggaaata caaaggcttt acgaaaaatg agtttttgct tctcattgca
       61 tcgaggagca actcgcggcg gcggccgcga aggcggcgga gacgttcggc ggcgtcgaca
      121 tcctcgtgaa caacgcgagc gcgatcagcc tgacgggaac gctgcagacc ccgatgaaac
      181 ggttcgacct gatgttcggc gtgaatgtcc gggggaccta cgccgcctcg caggcgctcc
      241 tgccgtacct cctgaaggcg aaaaaccccc atatcctgac gctgagcccc cccctttcca
      301 tggatccgaa gtggttcggc aaccattgcg cctatacgat ggcgaagtac gggatgagca
      361 tgtgcgtcct ggggatggcg gaagagttcc ggggagacgg cgtggcggta aacgccctgt
      421 ggccgaggac ggtgatcgcc accgcggcgt tagcgatgat ccccggcgtc gagctcagga
      481 attgccgcaa gccggagatc gtcgccgacg cggcgaatgg gatcctcacg cgcgacagcc
      541 gctcgtgcac cgggaacttc ttcctcgacg acgatgtgct cgccgccgaa ggggtgacag
      601 acctctcccg ctacgccgtc gagccgggcg ctccgctcct ccccgacctc ttcctcggct
      661 gaaaggaggg cgcatggaac agttgtcaag cgcgctgacc gtcgttcacc tgctggccgt
      721 catcgcgtgg ctgggaggga tgatcttcca catcgtcgtc ctggacccgg tgttccggaa
      781 gaacgaggtg agcttccaga gcgcgtacct tctcgccttg atggaaggcc ggttccggaa
      841 actggtgggg acctcgatcg ccctcctgct cgcctcgggc gccgcgaagg cgtacctgat
      901 gctggggacg accgacgcgc tccttcacac cagggaaggc cggtacgtcc tcctgaaggc
      961 tgggttaacc gccgcgatgc tcgtcatctt cgcggtctgc ccgaagacga agtcgtgctc
     1021 cccgatcccg ggagtctgcg acgtcgcctc cgaagggatc ctcgcgggga aaatggacgg
     1081 gacgatccgg gagcggtcca aggtgatcct cccgaaggtg gcgctggggc tgggagtggc
     1141 cgccctcgtc gccgccgtgc tgcttcgcgg gtaacttact tcctcgcctt ctcctgcagg
     1201 aatgcgccca gggccttgtc gaccttcccg atgtggttga ccagccagtc acccatgtag
     1261 cggcccatct tgtcggccag ctcgggggtt gcgccgttgg cgtcgtactc gtcccgcagg
     1321 tcgtagaagt cgttgatgaa cgccacgtgc tcccccttgt gggaggggaa cccagggtag
     1381 gagaggcggc gcatgtagag ctcctccagc ccgaaatggt tgttgacgta ctcctcgaga
     1441 aagtcgagaa ccttcgccag atcccgcggg gcgggcatcc cctcctcccg caacagggag
     1501 ttgatcgcgg cgaacagttc ccggtgctgg gcgtcgatgg tgtcgactcc caccgaccat
     1561 cgttccgtcc actcgaacaa gattccctcc ggttatccgg ccgccggggt ggaggggtat
     1621 ccctcctccg cggtcgcctt caaaagcatc tccacggtcg tcctcgaagg gtcgcaggaa
     1681 accaccgcgc gcggagggga caaggtcacc tcaaccgcct cgaccccggg taccgccgcg
     1741 agcgccttct tcaccgcggc gacgcaatgg ccgcacgtca tccccgtgat cgccagcgcc
     1801 acatgtccgc tctccatcgc ctctcccctt cccgcttcgc cggtgatgcc ggggtatcgg
     1861 aatattatat agtagactgc agcggatgac ggagaacggg acgatactcg tgacgggagc
     1921 caccggctac gtgggggccc gcctcgtcac acgcctgctg gcgaaagggt accgggtgcg
     1981 cgcctccggc cgttcccttg ggcgcctgcg gaagcatccc tgcgcgaacc ggcccggcgt
     2041 ggagctcttc ccggccgacg ccctggaccc cgcatcgatc gcgaaggcgt gcgaagggtg
     2101 cgcggcggcg tactacctcg tccattccat gatgccgggc ggaggggaat tcgaggagaa
     2161 ggaccgggaa gcggcgcaaa acatggcgcg ggccgccacg ga
//
LOCUS       DATGYW010000447         2437 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_507022, whole genome shotgun sequence.
ACCESSION   DATGYW010000447 DATGYW010000000
VERSION     DATGYW010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_507022"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..206
                     /locus_tag="VK429_06240"
     CDS             <1..206
                     /locus_tag="VK429_06240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013720232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HLN91444.1"
                     /translation="QVINGVLLPFVLLFVLKLINDRELMGVHVNSKAFNGIAWTTTVV
                     MIVLTVLLVAVTVFPGLPGTLGL"
     gene            complement(211..1470)
                     /locus_tag="VK429_06245"
     CDS             complement(211..1470)
                     /locus_tag="VK429_06245"
                     /inference="COORDINATES: protein motif:HMM:NF015413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HLN91445.1"
                     /translation="MALIGEVYVGDILGKVVLDPRGEEIGRVQDIAVEAGARFPRAVG
                     LFIEKGKTTRYLPWEELSIFNKRIISSRKTEAEIPEAAPSQEHLLIRKDLLDKQIVDI
                     DGAKVVRVNDVKLTEEGGAAYVTDVDVGMRGILRRLGVERRGGAFFETIRHPLRHQLI
                     SWQFLQPIESRLDRLTLSVSRDAVSDLHPADLAQIMSDLAPEERQDFFEKLDTETAAE
                     ALHELEPEVQADLISEMNKEQAADIIEQMPPDEAADVIADLPAEKAQELLQLMEKEEA
                     QDIHELLHHEEDTAGGLMTNEYLAWPPGITVGEALERFKTEAREIEHVYYIYVVEDER
                     LLGVVGLRDLLVEEPGKRLSEVMHAKLKTAHPETGQDTVAALISKYNLLALPVIDAEN
                     RLLGVVTVDDVVDLLLPPASRKKRRKM"
     gene            1566..>2437
                     /locus_tag="VK429_06250"
     CDS             1566..>2437
                     /locus_tag="VK429_06250"
                     /inference="COORDINATES: protein motif:HMM:NF024634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HLN91446.1"
                     /translation="MVSAARTSCEGFDAMMDHRWRNPYKTLPTLRAVVQGAYVAFFLL
                     AGYEFHLFYTQIVSGAAVTAHRAPAVEAFLPISALMSLKYFLLTGNFDEVHPAGLVIL
                     VAALVSAFLARKVLCSWVCPVGGISRALEWVGEKTIWKNRKKEVLLPVWADKALSAIK
                     YLLLAFFLYAVVLMMDAMAIMNFQRGTYNYAADAKMLLFFTEMTGVTAVTLAILALLS
                     IVVKNFWCRYLCPYGALLGLVSWVSPQRVVRDKQTCIDCKACTRACPVEILVHEKPSV
                     WTPECTGCMSCVAA"
BASE COUNT          350 a          845 c          778 g          464 t
ORIGIN      
        1 cccaggtgat caacggcgtg ctgctcccgt tcgtcctcct cttcgtgctc aagctgatca
       61 acgaccggga gctgatgggg gtgcacgtca attcgaaggc gttcaacggg atcgcgtgga
      121 cgaccacggt cgtcatgatc gtcctcaccg tcctgctggt ggcggtgacc gtcttccccg
      181 gacttcccgg aacgctcggc ctgtaggaag ctacatcttc cggcgcttct tccgggaggc
      241 gggcggaagg aggaggtcga cgacgtcgtc cacggtgacc acgccgagga ggcggttctc
      301 cgcgtcgatg accggcaagg cgagcaggtt gtacttggag atcagcgcgg cgaccgtatc
      361 ctgaccggtc tccgggtggg ccgtcttgag cttcgcgtgc atcacctccg acagccgctt
      421 ccccggctcc tcgaccagca ggtcccgcag gccgacgacg ccgagcagcc tctcgtcctc
      481 caccacgtag atgtagtaga cgtgctcgat ctcccgggct tccgtcttga accgctcgag
      541 cgcctccccc accgtgatcc ccggcggcca cgcgaggtac tcgttcgtca tgaggccccc
      601 cgcggtgtcc tcctcgtggt ggagcagctc gtggatgtcc tgcgcctcct ccttctccat
      661 gagctgcagg agctcctggg ccttctccgc ggggaggtcc gcgatgacgt ccgccgcctc
      721 gtccggcggc atctgctcga tgatgtcggc cgcctgctcc ttgttcatct cggagatgag
      781 gtccgcctgg acctccggct cgagctcgtg cagggcttcc gccgcggtct ccgtgtcgag
      841 cttctcgaag aaatcctgcc gctcctcggg ggccaggtcg ctcatgatct gggcgaggtc
      901 cgccgggtgg aggtccgaca ccgcgtcgcg cgacaccgac agcgtcagcc ggtcgagcct
      961 ggactcgatc ggctggagga actgccagga gatcagctgg tggcgcaggg ggtggcggat
     1021 cgtctcgaag aaggcgcccc cgcggcgctc gacgcccagc cgccgcagga tcccccgcat
     1081 ccccacgtcg acgtcggtga cgtaggccgc gccgccctcc tcggtgagct tcacgtcgtt
     1141 cacccgcacg accttggcgc cgtcgatgtc gacgatctgc ttgtcgagga ggtccttgcg
     1201 gatgaggagg tgctcctgcg agggcgccgc ctccgggatc tccgcttccg tcttccggga
     1261 ggagatgatc cgcttgttga agatggagag ctcctcccag gggaggtagc gcgtcgtctt
     1321 ccctttctcg atgaacaggc cgacggcccg cgggaaccgc gcccccgcct ccacggcgat
     1381 gtcctggacg cggccgatct cctcgccccg cgggtcgagg acgacctttc cgaggatgtc
     1441 gccgacgtac acctccccga tgagcgccat ctccctgttc cacctcctcc gaacacccgc
     1501 ttcagtgtac gttccgggtt tgaggaaggt caaggaacgg acgcacgggt ccgtgggaag
     1561 atacaatggt ttcggcagcc aggacttcct gcgagggatt cgacgcgatg atggaccacc
     1621 gatggcgcaa cccgtacaag accctgccca ccctgcgcgc cgtcgtccag ggagcgtacg
     1681 tcgccttctt cctgctggcg gggtacgagt tccacctctt ctacacgcag atcgtctccg
     1741 gcgccgccgt gaccgcccac cgtgcccccg cggtggaggc gttcctgccg atctccgccc
     1801 tcatgtcgct caaatacttc ctgctcaccg ggaacttcga cgaggtccac ccggccggcc
     1861 tcgtgatcct cgtcgccgcg ctggtctccg ccttcctcgc ccgcaaggtc ctctgctcgt
     1921 gggtctgccc ggtcgggggg atctcccggg cgctggagtg ggtcggggag aagacgatct
     1981 ggaagaaccg gaagaaggag gtcctgctgc cggtctgggc cgacaaggcg ctctccgcga
     2041 tcaaatacct gctcctcgcc ttcttcctct acgccgtcgt cctgatgatg gacgcgatgg
     2101 cgatcatgaa tttccagcgt gggacgtaca actacgccgc cgacgcgaag atgctcctgt
     2161 tcttcacgga gatgaccggc gtcacggcgg tcaccctcgc gatcctcgct ctcctgtcga
     2221 tcgttgtgaa gaacttctgg tgccggtacc tgtgcccgta cggcgcgctg ctcgggctgg
     2281 tcagctgggt ctccccccag cgggtcgtgc gggacaaaca gacgtgcatc gactgcaagg
     2341 cgtgcacccg ggcgtgcccg gtcgagatcc tggtccacga gaagccgtcc gtctggacgc
     2401 cggagtgcac cggctgcatg tcgtgcgtcg ccgcgtg
//
LOCUS       DATGYW010000448         1586 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_469088, whole genome shotgun sequence.
ACCESSION   DATGYW010000448 DATGYW010000000
VERSION     DATGYW010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469088"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..414)
                     /locus_tag="VK429_06255"
     CDS             complement(<1..414)
                     /locus_tag="VK429_06255"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF21 domain-containing protein"
                     /protein_id="HLN91447.1"
                     /translation="MGIVLLVAFCLLMEALFTGSEMVLVSADRNKLTERSRRGDRGAG
                     LALELLSKPERPLATTLTATNVFIVLSSVVVTSRLLPRFGEYASLVAVALVTPLVIVL
                     GEVVPKSFARPRADRLVSAAGRIIRLGEISLYPLVA"
     gene            complement(416..>1586)
                     /locus_tag="VK429_06260"
     CDS             complement(416..>1586)
                     /locus_tag="VK429_06260"
                     /inference="COORDINATES: protein motif:HMM:NF013741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HLN91448.1"
                     /translation="DLLKWKEEGNRRAERIAQMLSKPNRLIATIFLGNEIVNVAISSV
                     IAALILPHLPAGAGEGIALLVGTLGILLIGDVTPKCLVWPRARGFSLAAAGPLHAFSH
                     VVAPARSVLEKIAGGILFLLGERGGPQTREMISEAEFRALVDVGEETGTLDSEEKELI
                     HNIFEMTDRRAGEIMTPLPDVFMIPRDLPYEELVARYRRYRRSRIPVYEGERHNVVGV
                     LHFKQLLRPMAEGGKPPVWQDLVRPPYVVPEVQKLAPLLREFQRRKMHIAIVVDEYGE
                     TSGIVTLEDVLEELFGEIREERDREEREIVPRPDGSSLVLGKTPIRHFNDAFGTAIPD
                     LEFDTVAGFLLHEFGRMPAPGEKTSLEGIAFTVERMKGLRIVEVGVRPALTGTEE"
BASE COUNT          268 a          551 c          529 g          238 t
ORIGIN      
        1 cgcgaccaaa ggatacaggg aaatttcccc caggcggatg attcgcccgg ccgcggagac
       61 gaggcggtcc gcccggggcc gcgcgaaact cttcgggacg acctcgccga ggacgatgac
      121 gagcggggtg accagcgcga cggcgacgag cgacgcgtat tcgccgaatc ggggcaggag
      181 ccgcgaggtg acgaccaccg aggagaggac gatgaagacg ttcgtcgccg tgagggtggt
      241 ggcgaggggg cgctccggct tcgacaggag ttcgagcgcc aggccggctc cccggtcccc
      301 ccggcgggac cgttcggtga gcttgttcct gtccgccgag accagcacca tctccgatcc
      361 ggtgaagagc gcctccatca ggaggcagaa ggcgacgagg aggacgattc ccatcctatt
      421 cctccgtccc cgtcagggcg gggcgcacgc cgacctcgac gatccgcaac cccttcatcc
      481 gctccaccgt gaaggcgatc ccctccagcg aggttttctc ccccggagcc ggcatcctcc
      541 cgaactcgtg gaggaggaac ccggcgaccg tgtcgaattc caggtccggg atcgcggtcc
      601 cgaacgcgtc gttgaaatgg cggatcggcg tcttcccgag gacgagggac gaaccgtcgg
      661 ggcgaggcac gatctccctc tcttcccggt cgcgctcctc ccggatctcc ccgaacagct
      721 cctcgaggac gtcctccagc gtcacgatcc cggacgtctc cccgtactcg tccacgacga
      781 tggcgatatg catcttccgc ctctggaact cgcgcagaag cggcgcgagt ttctgcacct
      841 cggggacgac gtaggggggc cggacgagat cctgccacac cggcggcttc cccccctcgg
      901 ccatcgggcg gagcagctgc ttgaaatgga ggacgccgac gacgttgtgc cgctcgcctt
      961 cgtaaaccgg aatccgggac cggcggtagc ggcggtaccg ggcgaccagc tcctcgtacg
     1021 gcagatccct cgggatcatg aagacgtcgg gcaggggggt catgatctcc ccggcgcggc
     1081 gatcggtcat ttcgaagatg ttgtggatga gctccttctc ctccgagtcg agggtgccgg
     1141 tctcctcccc gacgtcgacc agcgcccgga actccgcctc ggagatcatc tcgcgggtct
     1201 gcggccctcc ccgctccccc aggaggaaga ggattccgcc ggcgatcttc tcgagcacgg
     1261 agcgcgcggg agcgaccacg tgggaaaacg cgtggagcgg gccggccgcc gccagcgaga
     1321 agccgcgggc ccgcggccac acgaggcact tcggcgtcac gtccccgatc agcaggatcc
     1381 ccagcgtacc cacgagaagc gcgatgccct cgccggcccc ggccggaaga tgcggcagga
     1441 tcagtgcggc gatgacggag gagatcgcca cgttcacgat ctcgttcccg aggaagatcg
     1501 tcgcgatcag ccggttgggc ttcgagagca tctgcgcgat ccgctcggcc cggcggttcc
     1561 cctcctcctt ccacttcagg agatcc
//
LOCUS       DATGYW010000449         1754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_346950, whole genome shotgun sequence.
ACCESSION   DATGYW010000449 DATGYW010000000
VERSION     DATGYW010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1754
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346950"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1456
                     /locus_tag="VK429_06265"
     CDS             <1..1456
                     /locus_tag="VK429_06265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013178440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cation-transporting P-type ATPase"
                     /protein_id="HLN91449.1"
                     /translation="FASHRKRMATIHSSVADWTVRVKGAPQEVLRRCSRIRWGGEDRA
                     IGEAETAQVNAANDDLARAGLRVLAVAERRLPASPAGDEAGEVERDLTLLGLVAMMDP
                     PRPEVIEAVSRCHRAGIRIVMITGDYALTAESIARRVGILRTPEPRLLNGAELDGMGE
                     EALKGALRDEVILARVTPEHKLRVVNALQEMGHIVAVTGDGVNDAPALKKADIGVAMG
                     LSGTDVAKEAADMVLADDNFASIVNAVEEGRAVFANIKKFLTYIFTSNTPEAVPFILF
                     AFTAGRIPLALNVMQILSIDLGTDLVPALALGAEPPEPGVMDRPPRSLSEHAITGSLL
                     LRAYLFLGLIQSAAAMAAFYFVFWTNGYRGRWIDLPSDGPLYRAATAMTLAAVVATQV
                     GNLFAQRTERASVFHSGFFRNRLVWVGIATEVGVLLLIVYVPFLQSIFGTAGFPAQGW
                     GFLLLCVPVLLLADEGRKALLRFRERATNPGGAP"
     gene            1453..>1754
                     /locus_tag="VK429_06270"
     CDS             1453..>1754
                     /locus_tag="VK429_06270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011957771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HLN91450.1"
                     /translation="MKIIVIGCGRMGAGLAQTLSLQGHAVTVVDVDPASFDRLGPSFK
                     GHTVAGSAVDRETLLAAGMERADGLAAVTASDEANVVAARLAMQVFHVPRVVARLY"
BASE COUNT          252 a          591 c          636 g          275 t
ORIGIN      
        1 cttcgcctcc caccggaagc ggatggcgac gatccattcg tcggtggccg attggacggt
       61 ccgggtgaag ggcgcccccc aggaggtgct ccggcgctgc tcgcgcatcc gttggggagg
      121 agaagaccgg gcgatcgggg aagcggaaac agcgcaggtg aacgcggcca acgacgatct
      181 cgcccgggcg gggctgcgcg tgctggcggt cgccgagagg cgcctgccgg cctcccccgc
      241 aggcgatgag gccggggagg tcgagcggga cctcaccctc ctgggcctcg tggcgatgat
      301 ggaccccccc cggccggagg tcatcgaggc ggtgtcccgg tgccaccgcg ccgggatccg
      361 gatcgtcatg atcaccggcg actatgcgct gacggcggag agcatcgccc ggcgggtcgg
      421 gatcctgcgc accccggaac cccgcctgct gaatggcgcc gagctggacg ggatggggga
      481 ggaggccctc aaaggggcgc tccgggacga agtgatcctc gcccgggtga cgccggagca
      541 caagctgcgg gtggtcaacg ccctgcagga gatggggcac atcgtggcag tgaccgggga
      601 cggggtgaac gacgcccccg cgctgaaaaa agccgacatc ggggtggcga tgggcctctc
      661 ggggacggac gtggccaagg aggccgccga catggtcctg gccgacgaca acttcgcctc
      721 catcgtaaac gcggtggagg aagggcgcgc cgtcttcgcc aacatcaaga agttcctcac
      781 ctacatcttt acgagcaaca cccccgaggc ggtgccgttc atcctcttcg ccttcaccgc
      841 ggggcgcatc ccgctggcgc tcaacgtcat gcagatcctg tcgatcgacc tggggaccga
      901 cctcgtcccc gccctggcgc tgggggccga gccgcccgag ccgggggtga tggaccggcc
      961 gccccgcagc ctgtcggagc acgcgatcac ggggtccctc cttctgcggg cctacctctt
     1021 ccttggcctg atccagagcg cggcggcgat ggcggcgttc tacttcgtct tctggacgaa
     1081 cggataccgg gggagatgga tcgatctccc ctcggacggg ccgctctacc gggccgccac
     1141 cgcgatgacc ctggccgccg tcgtcgccac ccaggtgggg aacctctttg cccagcggac
     1201 cgagcgcgcc tcggtcttcc actccggttt cttccggaac cgtctcgtct gggtcgggat
     1261 cgccacggag gtgggggtcc tgctcctgat cgtctatgtc ccgttcctgc aatccatctt
     1321 cggaacggcg gggttccccg cgcagggatg gggattcctt ctcctgtgcg tccccgtgct
     1381 gctgctggcc gacgagggcc gcaaggcgct gctccggttc cgggagcgcg cgaccaaccc
     1441 gggaggtgcg ccttgaagat catcgtcatc ggctgcggcc ggatgggtgc ggggctcgcg
     1501 cagacccttt cgttgcaggg ccacgcggtg accgtggtgg acgtggaccc ggcgtccttc
     1561 gaccgcctgg ggccgtcctt caagggacat acggtcgccg ggagtgccgt cgaccgggag
     1621 acgcttcttg ccgcggggat ggagcgcgcc gacgggctgg cggcggtgac cgcaagcgac
     1681 gaggccaatg tggtcgccgc gcggctggcg atgcaggtct tccacgtccc acgggtggtg
     1741 gcccgactct acga
//
LOCUS       DATGYW010000450         1917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_34357, whole genome shotgun sequence.
ACCESSION   DATGYW010000450 DATGYW010000000
VERSION     DATGYW010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34357"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..878
                     /locus_tag="VK429_06275"
     CDS             <1..878
                     /locus_tag="VK429_06275"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004179907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HLN91451.1"
                     /translation="RELLFTTPGIPEFISGVILYDETVRQRSADGTPFTKVLERQGIV
                     PGIKVDEGAKALVGFPGEKITAGLDGLQGRLPEYRTLGARFAKWRAVIDIGAGIPTRY
                     CLQANAHALARYAALCQEAGLVPIVEPEVLMDGAHTIDRCEEVTTEVLSLVYSELTAH
                     RVALEGTLLKPNMVVSGKGCATQAGAAQVAEATIRTLSRVVPPAVHGIVFLSGGQTPR
                     QATENLSSMNAMGKHPWELSFSYGRALQDPVLKAWRGKAANIPAAKDAFLLRARLNGA
                     ARYGKYSRDMEQAAS"
     gene            946..>1917
                     /locus_tag="VK429_06280"
     CDS             946..>1917
                     /locus_tag="VK429_06280"
                     /inference="COORDINATES: protein motif:HMM:NF017197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF748 domain-containing protein"
                     /protein_id="HLN91452.1"
                     /translation="MKWLEGVRSKPRIRKGLIAVGVVFLIYVLFGFLALPPILKSVLS
                     NTLSETFHRKTTIQSIRVNPFELSLSVRGLTISERDAPGTWISAGDIYANLQLASVIR
                     GGPVLSEVRVTRPFVNIVRRPDGSYNFSDLIEQFGKKREKRKEEERVLKYSFNNIRVI
                     DGSLDFDDGPKMNRHEVRKIQIAIPFLSNLPYYVDRYVQPSFSAVVNGDPVSFVGKTK
                     PFTESLETTFDLNVVDLDITNYLEYVPLQREYEIPSAILSVDAVLSFMQHKSKPPTLR
                     AEGDVILKDVRVRGRDKGPMLYLPLIKASISPSDLAAREFRLAALQFQ"
BASE COUNT          375 a          577 c          608 g          357 t
ORIGIN      
        1 accgggaact cctcttcact accccgggca tcccggagtt catcagcggc gtgatccttt
       61 acgacgagac ggtccggcaa cgttccgccg atgggacgcc gttcacgaag gtacttgagc
      121 ggcaggggat cgtaccgggg atcaaggtcg acgaaggggc gaaggcgctg gtcgggtttc
      181 ccggggagaa gatcactgcg gggctggacg ggctgcaggg gcgcctgccg gaatatcgga
      241 cgctgggcgc ccgtttcgca aagtggcgcg cggtgatcga catcggggcc ggaatcccga
      301 cgagatattg cctccaggcc aacgctcacg cgctggcccg ctacgccgca ctgtgccagg
      361 aagcggggct cgtccccatc gtggagccgg aggtgctgat ggacggcgcc cacacgatcg
      421 accggtgcga ggaggtgacc accgaagtgc tctcgctggt ctactcggaa ttgacggccc
      481 atcgggtggc gctcgaggga acgctgctga agccgaacat ggttgtttcc gggaaggggt
      541 gtgcgaccca ggcgggagcg gcgcaggtgg cggaagcgac gatacgaacc ctctcccgcg
      601 tcgtcccgcc ggccgtccat ggcatcgtct tcctctccgg aggccagacc ccgcgccagg
      661 ccacggagaa tctgagctcc atgaacgcga tggggaagca cccatgggaa ctgagtttct
      721 cctacgggag ggcgctgcag gatcctgtgc tgaaagcatg gaggggaaag gcggcgaata
      781 tcccggcggc gaaggatgcg ttcctcctgc gcgcaaggtt gaacggggcg gcccgttacg
      841 ggaaatactc tcgggatatg gagcaggcgg catcgtaacc tcgtcagagg gtgacattcc
      901 tggttccgat aagagggtaa cctcaggggc aggaggggac cggtgatgaa atggctggag
      961 ggcgtccggt cgaagcccag gatccggaag ggcttgatcg cggtgggggt cgttttcctc
     1021 atctacgtcc tcttcgggtt cctcgccctc ccgcccatcc tcaaatccgt cctttcgaat
     1081 accctctccg aaacattcca ccggaaaacg acgattcaga gcattcgggt aaatcctttc
     1141 gaactgtccc tctccgtgcg gggactcacg atttcggagc gggacgctcc gggtacctgg
     1201 atttccgcgg gggatatcta tgcgaacctt caactcgcgt cggtgatccg gggaggtcct
     1261 gtcctcagcg aggtccgggt cacccgcccc ttcgtgaaca tcgtccggcg cccggacggc
     1321 tcctacaact tttccgacct gatcgaacaa ttcgggaaaa aacgcgagaa acggaaagaa
     1381 gaagagaggg tattaaagta ttcctttaat aacatccggg ttatcgacgg gagccttgac
     1441 ttcgacgacg gcccgaaaat gaaccggcac gaggtccgga agatccagat cgccatcccg
     1501 ttcctgtcga accttccgta ttacgtcgat cggtacgtgc agccatcctt ttccgcggtg
     1561 gtcaacgggg atccggtctc cttcgtgggg aagaccaagc cgttcacgga atcgttggag
     1621 acgacgttcg atctgaacgt cgttgacctc gatatcacga actacctcga atacgtccct
     1681 ttgcaacggg agtacgaaat cccttccgcc atcctcagcg tcgacgcggt cctctccttt
     1741 atgcagcaca agagcaagcc ccccaccctt cgcgcggaag gggacgtgat actgaaggat
     1801 gtccgcgtcc ggggcaggga caagggcccc atgctttacc tgcccctgat caaggcgtcg
     1861 atatcgccct cggacctggc ggcgcgtgag ttccgcctcg ccgctctcca gttccag
//
LOCUS       DATGYW010000451         2578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_309607, whole genome shotgun sequence.
ACCESSION   DATGYW010000451 DATGYW010000000
VERSION     DATGYW010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2578
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309607"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            258..1055
                     /locus_tag="VK429_06285"
     CDS             258..1055
                     /locus_tag="VK429_06285"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HLN91453.1"
                     /translation="MFKGSGRAFLSAFLMTIIAGNAFGALPFITDDADPLGKGTSQVE
                     LWYTRSTDKETVDGSTVKADRNLPGATFGYGVADPLDLTLGFAREWDKVTVDGASSND
                     PGSALFTISTKWRLYENEKTRYRFAVKPLVGYSYHVGGTGDDHTVSLGGWILATKEHD
                     SFAVTLNVGYFYNNYGSAADRDASRSGIWIVSALATYEVLKGLKLGFDLGASTNKDRA
                     DSTIPAYALAGAIYTLNGNVDLGLGLKFGITKPEPDFSGTAGVTIKF"
     gene            1149..2078
                     /locus_tag="VK429_06290"
     CDS             1149..2078
                     /locus_tag="VK429_06290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007221249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HLN91454.1"
                     /translation="MTVVRKIRKVWRAKPTIEGAGVHLKRVFGNQEVPQLDPFLLLDD
                     FRSDDPSKYLPGFPWHPHRGIETITYVLQGDVEHGDSMGNKGDISAGDVQWMTAGSGI
                     LHQEMPKGDARGRMGGFQLWANLPASHKMMDPRYREVKRSQIPEVALEGGAKVKIISG
                     RVNGVEGPVRDIVTDPEYLDVTVPKGASFQHAMKRGHTVFAYVVEGSGYFDPGRDPYL
                     REEVGRNYFDMDRQCLCGSETLVLYGDGDAVSVTAEGKTVRFLLVAGKPIGEPVAWYG
                     PIVMNTAEEIRIAFDEYRRGTFIKGGKRSRPTP"
     gene            2213..>2578
                     /locus_tag="VK429_06295"
     CDS             2213..>2578
                     /locus_tag="VK429_06295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91455.1"
                     /translation="MEGRNYWMPRLGIPLAGMMLIGCFVPVAYGVYKIYDTGNHEVLV
                     INVKENPATLYKVTLQTIQDRKITKITKRDDKEMVITGESEKRQVTVKINPLPRDNSQ
                     VIISLEKGPDPKRQREIAVS"
BASE COUNT          583 a          684 c          809 g          502 t
ORIGIN      
        1 ttctgtttca agggatctgc ggggagcttg acggagggag tcggaacgga ctgcaaaccc
       61 cttgcaaacg actggcatga tcggggtggg catgcgggta ctcgtggacg gtgttgacgg
      121 gggaaacccc ttcatgcctc aattattctt gctggaccgg acaccggcgg atgtggtgac
      181 gacgagggga taaaggaggc atcttggctc gtcgggatcg ttcttattac caaatccggt
      241 gtctgcagag ctatgggatg ttcaagggat cgggaagggc atttctctcc gctttcctca
      301 tgacgataat tgcgggaaat gcgttcggag cactcccgtt catcaccgat gatgccgacc
      361 ccctgggcaa agggacctcg caggtcgaac tgtggtacac aaggtccacc gacaaggaaa
      421 ccgtcgacgg ctccaccgtg aaagccgaca ggaatctgcc gggagcgacc ttcggctacg
      481 gggtggccga tccgctcgac ctgactctcg ggttcgcgag ggaatgggac aaggttaccg
      541 tggacggcgc ctcctcgaac gaccccggaa gcgctctttt taccatcagt acgaaatggc
      601 ggttatatga aaacgaaaaa acgaggtacc gtttcgcggt gaaacccctg gtcgggtact
      661 cgtatcatgt gggcggaacg ggcgacgacc acaccgtctc cctcggtgga tggatccttg
      721 caaccaagga gcacgactcg ttcgctgtca ccctgaacgt ggggtatttc tacaacaatt
      781 acggatccgc ggcggaccgt gacgccagca ggagcggtat ctggatcgtt tccgccctcg
      841 cgacgtacga agttctcaag ggattgaaac tggggttcga cctgggggca tcgaccaaca
      901 aagacagggc ggacagcacg ataccggcct atgcactggc cggagccatc tacaccctga
      961 acgggaacgt cgacctcggc ctggggctta aattcggcat caccaaaccc gaaccggatt
     1021 tttcgggaac tgccggggtt accatcaagt tctgattcga aagaatcgtt cttgacccgc
     1081 aatcgttgca gacagttgtc tcctcaaatc ctataatcgg atcgagatcg cgtagaggag
     1141 gagcagcgat gaccgtcgta aggaaaatcc ggaaggtgtg gcgggccaaa ccgacgatcg
     1201 aaggggccgg tgtccacctc aagcgtgtct tcggcaacca ggaggtgccc cagctcgatc
     1261 ccttcctgct cctcgacgac ttccgttcgg acgacccatc gaaatatctc cccggttttc
     1321 cttggcaccc gcaccggggg atcgagacga tcacctacgt tctccagggg gatgtggagc
     1381 acggcgacag catgggcaac aagggggata tttccgccgg cgatgtccag tggatgaccg
     1441 ccgggagcgg catcctccac caggagatgc cgaagggcga cgcacggggg cgcatggggg
     1501 ggttccagtt gtgggccaac ctgcccgcgt cccacaagat gatggacccg cgataccggg
     1561 aggtgaagcg cagccagatc ccggaggtcg ccctggaggg cggtgcgaag gtgaagatca
     1621 tttccggacg ggtgaacgga gtggaaggtc cggtccggga catcgtgacc gacccggagt
     1681 acctcgatgt caccgtcccg aagggggcga gtttccagca tgcaatgaag aggggacata
     1741 cggtctttgc gtatgtcgtc gaagggagcg gctacttcga cccaggccgg gatccttacc
     1801 tccgggagga ggtggggcgg aactatttcg atatggaccg gcagtgcctt tgcggttccg
     1861 aaacgctcgt cctctatggg gatggagatg cggtttccgt aaccgccgag ggaaaaacgg
     1921 tccgttttct tcttgttgcg ggaaagccga tcggcgagcc ggtggcatgg tacggtccga
     1981 tcgtgatgaa taccgcagag gagatccgga tcgccttcga cgagtacagg agggggacct
     2041 ttataaaagg gggcaagcga tcccgcccaa ccccttgata ttcatggtgg cccctcccag
     2101 aatggaactg gggacacgag ggttttcagt caacttggac ccgggttttc gtttgccatc
     2161 acgcttctgt tctcgatatg atggcaatac cttgacggga aaggagcctg ggatggaggg
     2221 acgcaactac tggatgccga ggttgggtat cccgctggcg gggatgatgc tgattgggtg
     2281 ttttgtcccg gttgcctatg gggtatacaa aatttacgac acagggaacc acgaggtcct
     2341 cgttatcaat gttaaggaga atccggcgac actctacaaa gtcacccttc agaccatcca
     2401 agataggaaa atcaccaaga tcaccaagcg agacgataag gagatggtca tcaccgggga
     2461 aagtgagaag cgccaggtga cagttaaaat caaccctttg ccaagagata acagccaggt
     2521 aatcatctcg ttggaaaagg ggcccgatcc caagcgccaa cgggaaatcg ccgtgtcg
//
LOCUS       DATGYW010000452         2345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_415816, whole genome shotgun sequence.
ACCESSION   DATGYW010000452 DATGYW010000000
VERSION     DATGYW010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415816"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            151..1590
                     /locus_tag="VK429_06300"
     CDS             151..1590
                     /locus_tag="VK429_06300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011564094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HLN91456.1"
                     /translation="MTLSPSESYSITMRLEIQNKVGMLGKVTTAIGTAGGDIGAIDLS
                     GHGKGTVIRDITARARGIEHAQEIINTMKQIPGVKVVNVSDRTFLMHLGGKIEVHNKI
                     PVKTRNDLSMAYTPGVARVCMAIHKDVKKSFSLTIRRNAVAVVSDGTAVLGLGDIGPE
                     AAMPVMEGKAMLFKEFAGIDAWPICLNTKDTEEIIRVVKALEPTFGGINLEDISAPRC
                     FEIEERLKADMGIPVFHDDQHGTAVVVLAALLNSLKIVKKRIEDMKIVVAGVGAAGVA
                     CSKIIMNAGARNIIGVDRIGAIYKGRKQHMNFMKEWYAEHANPFNEKGKLSDVIAGAD
                     MFIGLAGPGLITVDDLKKMAKDPLVFAMANPDPEIMPEEAAPYVRIMATGRSNYPNQI
                     NNVLCFPGIFRGALDSRATGINEEMKLAAAYAIASCVGKEELSEDYIIPSVFNRKVSP
                     IVAKEVSRAAHRTKVARRTSKTYMEIHLD"
     gene            1595..>2345
                     /locus_tag="VK429_06305"
     CDS             1595..>2345
                     /locus_tag="VK429_06305"
                     /inference="COORDINATES: protein motif:HMM:NF014877.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase"
                     /protein_id="HLN91457.1"
                     /translation="MAPVNPLIFREYDVRGLVGRDLHRDAVVLLGKGYGTLVAAEGVR
                     TVALGRDCRLSSPGFRDAIAEGLLSAGLKVIDVGVCPTPVLYFAIHHFGADGGVMITG
                     SHNPPEFNGFKLCVGTGTLYGERIQELRRVIERGAFREGKGEIVSREIIPEYRKFVAG
                     SLSIPRKLKVVVDAGNGTAGAVAPDLFREMGMEVTELFCDPDGRFPNHFPDPTVPENL
                     RFLREKVREAGADVGVGYDGDADRIGTVDEKG"
BASE COUNT          462 a          704 c          816 g          363 t
ORIGIN      
        1 gtccgagcgg aggaacccgg acacggtaga ccgggagatc ggattttcga gaggacgcat
       61 tccggcattg cgcttgaatt gcccggtgcg cgcgcctaaa atacgccact atacccgcac
      121 caccagcctg cagaggggag aatcacagcc atgacgcttt ctccaagcga aagctacagc
      181 atcacgatgc ggttggagat ccagaacaag gtcggcatgc tcggcaaggt gaccaccgcg
      241 atcggcaccg ccggcgggga catcggggcg atcgacctct ccggccacgg gaagggaacg
      301 gtcatccggg acatcaccgc gcgggcccgg gggatcgagc acgcgcagga gatcatcaac
      361 accatgaagc agatcccggg tgtcaaggtc gtgaacgttt cggaccggac cttcctgatg
      421 cacctcggcg ggaagatcga ggtccacaac aagatcccgg tgaagacccg gaacgacctc
      481 tccatggcgt acaccccggg cgtcgcgcgc gtgtgcatgg cgatccacaa ggacgtgaag
      541 aagtcgttct ccctgacgat ccggaggaac gcggtggccg tcgtttcgga cggcacggcg
      601 gtgctggggc tgggggacat cggccccgag gcggcgatgc cggtcatgga agggaaggcg
      661 atgctcttca aggagttcgc cgggatcgac gcctggccga tctgcctcaa cacgaaggat
      721 accgaggaga tcatccgggt cgtcaaggcg ctcgagccca ccttcggcgg gatcaacctc
      781 gaggacatct ccgcgccgcg ctgcttcgag atcgaggagc gcctgaaggc cgacatgggg
      841 atccccgtgt tccacgacga ccagcacggg acggcggtgg tcgtgctggc cgcgcttctg
      901 aactccctga agatcgtcaa gaagcggatc gaggacatga agatcgtggt ggcgggtgtc
      961 ggagccgccg gggtggcgtg cagcaagatc atcatgaacg ccggcgcgcg caacatcatc
     1021 ggggtggacc ggatcggggc gatctacaag gggcgcaagc agcacatgaa tttcatgaag
     1081 gagtggtacg cggagcacgc gaacccgttc aacgagaagg ggaaactctc ggacgtgatc
     1141 gcgggcgccg acatgttcat cggcctggcg ggcccggggc tcatcacggt ggacgacctg
     1201 aagaagatgg cgaaggaccc gctcgtcttc gccatggcga accccgaccc ggagatcatg
     1261 ccggaggagg cggcgccgta cgtccggatc atggcgacgg ggcgctccaa ctacccgaac
     1321 cagatcaaca acgtcctgtg cttcccgggg atcttccgcg gggcgcttga ttcgcgggcc
     1381 acgggcatca acgaggagat gaaactcgcc gcggcgtacg cgatcgcctc gtgcgtcggc
     1441 aaggaggaac tttccgagga ttacatcatc ccgtcggtct tcaaccggaa agtatcgccg
     1501 atcgttgcca aggaggtctc ccgcgccgcg caccggacca aggtggcgcg ccggacctcc
     1561 aagacttata tggaaatcca cctcgattga ccgaatggcg ccggtcaatc cactgatctt
     1621 ccgcgagtac gacgtccgcg gcctggtggg gagggatctt caccgggacg cggtcgtcct
     1681 gctcgggaag gggtacggaa cgctcgtggc cgcggaaggc gtccggacgg tggcgctcgg
     1741 gcgcgactgc cgcctttcct ctcccgggtt ccgggatgcg atcgcggagg ggctcctctc
     1801 cgccggactg aaggtgatcg acgtgggcgt ctgcccgacg cccgtgcttt atttcgccat
     1861 ccaccatttc ggcgcagacg gtggcgtcat gatcacgggg agccacaacc ccccggagtt
     1921 caacggcttc aaactgtgcg tcgggaccgg tacgctgtac ggggagcgga tccaggaact
     1981 gcggcgcgtc atcgagcggg gggcgtttcg ggaagggaag ggagagatcg tctcccggga
     2041 gatcattccg gaataccgga agttcgtcgc ggggtccctg tcgatcccgc ggaaactcaa
     2101 ggtggtcgtc gacgcgggaa acggcacggc cggggccgtg gcacccgacc tgttccggga
     2161 gatgggaatg gaggtcaccg agctgttctg cgatccggac ggccggttcc ccaaccactt
     2221 tccggacccc acggtaccgg agaacctccg gttcctccgg gaaaaagtga gggaagccgg
     2281 ggcggatgtc ggggtcgggt acgacggcga cgcggaccgg atcgggacgg tcgacgagaa
     2341 gggga
//
LOCUS       DATGYW010000453         1659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_507747, whole genome shotgun sequence.
ACCESSION   DATGYW010000453 DATGYW010000000
VERSION     DATGYW010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_507747"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1343)
                     /locus_tag="VK429_06310"
     CDS             complement(<1..1343)
                     /locus_tag="VK429_06310"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HLN91458.1"
                     /translation="MTVLFTDLTGYTAMCERLDPEDVKEVMSRIFGEIAQVVTKYEGV
                     IEKFIGDAAMALFGVPRAHEDDPVRAIKAAMEIHELVEALGPQVRAMGCRPLSMHTGI
                     DTGLVVTGGVDAGKGATGVTGDTVNLASRLSGMGKAGEILVGPYTYRIAERYFDFEAL
                     EPTPVEGKADPVRIYRVLSRKDQPSKIHRLTGLRAELIGRKAEMAQLSEAVEKLRKGK
                     GSIIGICGDAGTGKSRLVEEFKATLDLKEIQWREGQAYAYSQNVPYFPVTDMMKRALR
                     IEEGDPPSKIREKVESRIERLVGRREDIIPYIGSLLGLSYPEIEGTSPDSWKHRLHKA
                     VQEYLSAAVRIAPTVFCLEDIHWGDPSSIDLLRAILSEGRHPALFLCLYRPPFTLFPS
                     HMGGAVGDTYREIRLKHLSPPDALEMTRSLLKTGDVPLELRRFVQEKAEGNPFYL"
BASE COUNT          305 a          539 c          466 g          349 t
ORIGIN      
        1 tccaggtaga aggggttccc ttccgccttc tcctggacga aacggcgaag ttccaacggt
       61 acatccccgg ttttcagcag ggatcgcgtc atctccaggg cgtccggtgg cgacaggtgc
      121 tttagccgga tctcccggta cgtatccccc acggcgccgc ccatatggct ggggaagaga
      181 gtgaagggtg gccggtacag gcagagaaag agcgccggat gccttccttc cgacaaaatc
      241 gcccgtagca ggtcgatcga agaagggtcg ccccagtgga tgtcctcgag gcagaacacc
      301 gtgggtgcta tcctcaccgc ggcggacaga tattcctgga ccgccttatg caaacggtgc
      361 ttccaggaat cggggctcgt cccctcgatt tcgggatagg agaggcccaa caggcttccg
      421 atgtaaggga tgatatcctc ccgtcttccg acgagacgct cgatccggct ctccaccttc
      481 tcccggatct tcgagggagg atcgccctcc tcgatcctca gcgccctctt catcatgtcc
      541 gttacgggga aataggggac gttctgggaa taggcgtagg cctgcccctc ccgccattgg
      601 atctccttga gatccagcgt ggccttgaac tcctcgacaa gccggctttt gcccgtgccc
      661 gcgtccccgc agatgccgat gatcgacccc ttccctttcc gcagtttttc gaccgcctcg
      721 gagagttgag ccatttcggc cttccggccg atcaactccg cccgcaaacc ggtcagccga
      781 tggatcttgc tgggctgatc cttccgggag aggacccggt agatccggac cggatccgcc
      841 tttccttcga ccggggtggg ttccaatgcc tcgaaatcga aatacctctc cgctatgcga
      901 taggtgtacg gcccgaccag gatctccccc gccttcccca tgccgctcag gcgggacgcc
      961 aggttgacgg tgtcccccgt aacgccggtt gcccctttcc ccgcatccac tccgccggtg
     1021 accacgaggc cggtgtcgat cccggtgtgc atcgacagtg gcctgcagcc catggctctc
     1081 acttgcgggc ccagcgcctc gaccaactcg tggatctcca tggctgcctt gatggctctc
     1141 accggatcat cttcatgggc cctgggaact ccgaagaggg ccatggcagc atcgccgatg
     1201 aacttctcga tgaccccctc gtacttcgtt acgacttggg cgatctcccc gaagatccgg
     1261 ctcatgactt ccttgacatc ttccggatcg agtcgctcgc acatggccgt ataccccgtc
     1321 aggtcggtga acagtacggt cacatgccga cgctcgcttt ccggttcgga aaggaccccc
     1381 ggatcgtccg cttcacccag cgtctgtccg catgcgccgc agaaacgaaa accgacggga
     1441 ttttcggatt ggcactttgg gcacttcatc ggaatccctc ccgcccaggg gcgggaggcg
     1501 gtttcttctg tcggtgggaa tggtcgagag cccgcatcac gacttccagc ttgccgggac
     1561 ggttctgcga ttgtctcgag agattacgaa tcgaagtagt aaaacaatat tatattaata
     1621 atgagagtca gtcaaccacg ggctgtcaac acaggtacc
//
LOCUS       DATGYW010000454         1648 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_416002, whole genome shotgun sequence.
ACCESSION   DATGYW010000454 DATGYW010000000
VERSION     DATGYW010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416002"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1648)
                     /gene="priA"
                     /locus_tag="VK429_06315"
     CDS             complement(<1..>1648)
                     /gene="priA"
                     /locus_tag="VK429_06315"
                     /inference="COORDINATES: protein motif:HMM:TIGR00595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005658 - alpha DNA polymerase:primase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HLN91459.1"
                     /translation="TLHAASLPDLAGDLSPTPGQETALARIGVAVASGRHAVFVLHGV
                     TGSGKTEVYLRAVEQVRATGRQAIFLVPEIALTPQLLGRVRSRFRDGVAVLHSGLTPA
                     ERSSQWRKIRDGEVFLCVGARSAIFSPFPSVGLVVVDEEHDAAYKQEDGVRYQARDLA
                     LLRGRMEDAVVLLGSATPSAESFHRVRSGAATLLSLPERIGGSGMPEISVVDLKERTD
                     RRGADRYFSPELEAAIEATLARGEKAMLFLNRRGFAAALTCLECGTTVQCPNCQVALT
                     YHREHEALLCHYCNVMRKEPETCAKCGGHKLAQVGIGTERLLSWVSKRWKEARVARLD
                     SDVTRKRGAYAEVLSGMQRGEVDILVGTQMIAKGHDFPEITFVGVLLADLSLSFPDFR
                     ASERTFQILTQVAGRSGRGDRPGKVLFQTMAPESPAIRKAAEHDYAGFMEDELSAREA
                     MGYPPFGRMLLLRLSGAKQDAAREAADLVTGALSGPMSAHGVRLLGPAPSPIARVKRR
                     FHYQILLVAPPDLPVGDLFPELLRPLRERVRKSGVRLEADV"
BASE COUNT          259 a          575 c          594 g          220 t
ORIGIN      
        1 acgtcggcct ccaggcgcac gcccgacttg cgaacccgct cgcggagcgg gcgcaggagc
       61 tccgggaaga ggtcccccac cggcagatcg gggggcgcca ccagcaggat ctggtagtgg
      121 aagcggcgct tgacccgggc gatcggcgag ggggcggggc ccaggaggcg aactccatgg
      181 gcggacatcg ggccggaaag cgcaccggtt acaaggtcgg ccgcctcgcg cgccgcgtcc
      241 tgcttcgctc ccgaaaggcg aaggagcagc atccggccga agggggggta ccccatcgcc
      301 tcccgcgcgg agagttcgtc ctccatgaat ccggcgtagt cgtgctccgc cgccttgcgg
      361 atggccgggc tctccggcgc catcgtctgg aagaggacct tgcccggccg gtcgccgcga
      421 cccgaacgtc ccgcaacctg ggtcaggatc tggaaggtgc gctccgacgc ccggaagtcg
      481 gggaacgaca gggagaggtc ggccagcagc accccgacga aggtgatctc ggggaagtcg
      541 tgccccttgg cgatcatctg cgtcccgacg aggatgtcca cttccccccg ctgcatcccg
      601 gagaggacct ccgcatacgc gccgcgcttt cgggttacgt ccgagtcgag ccgcgcgacc
      661 cgcgcctcct tccaccgctt cgagacccag gagaggagcc gctcggtgcc gattcccacc
      721 tgggccagct tgtgcccgcc gcacttcgcg cacgtttccg gctccttgcg catcacgttg
      781 cagtagtggc acaggagcgc ttcgtgctcg cggtggtacg tcagcgccac ctggcaattc
      841 gggcactgca ccgtggtccc gcactcgagg cacgtgaggg cggcggcgaa cccgcgccgg
      901 ttcaggaaga gcatcgcctt ctcgccgcgc gcaagggtcg cctcgatcgc cgcctcgagc
      961 tcgggggaga agtagcggtc ggcgccgcga cggtccgtgc gctccttgag atcgaccacg
     1021 gagatttccg gcattccgct tccgccgatc cgctcgggga gggaaagcag cgtcgcggcg
     1081 ccgctccgaa cccggtggaa cgactcggcg gaaggggtgg cggagcccag caggacgacg
     1141 gcgtcctcca ttcggccccg cagaagggcg aggtcccgcg cctggtaccg gacgccgtcc
     1201 tcctgcttgt acgcggcgtc gtgctcctcg tccacgacca cgagacccac ggacgggaag
     1261 ggggagaaga tggcggagcg cgcccccacg cagagaaaca cctcgccgtc gcggatcttc
     1321 ctccactggg aggaccgctc cgccggggtg agcccgctgt ggagcaccgc gacgccgtcg
     1381 cggaagcggg agcggaccct gccgagcaac tggggggtga gggcgatctc ggggacgaga
     1441 aagatcgcct ggcggcccgt ggcgcgcacc tgctcgaccg cacgcaggta gacctcggtc
     1501 ttcccggaac cggtcacgcc gtgcagcacg aagacggcgt gcctcccgga ggcgacggcg
     1561 accccgatcc gcgcaagcgc ggtctcctgg ccgggcgtgg gcgagaggtc ccccgcaagg
     1621 tcgggaaggg acgcggcatg gagggtca
//
LOCUS       DATGYW010000455         1535 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_249429, whole genome shotgun sequence.
ACCESSION   DATGYW010000455 DATGYW010000000
VERSION     DATGYW010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249429"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1535
                     /locus_tag="VK429_06320"
     CDS             <1..>1535
                     /locus_tag="VK429_06320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015723939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLN91460.1"
                     /translation="VNPAGQVGAEPAPKGQEFTYAVRAQGRLQTEEEFGRIVIRASPD
                     GSILRLKDVARVELGAQTYSQNGRLNGKPAALVALYQMPGTNAIESVKGTRKLMEELK
                     TRFPDDLDYTVCLDTTLAVSEGINEIVHTLFEALALVIIVVFIFLQGWRATLIPLLAV
                     PVSLVGTFALFPLFGFSINTLSLFGLVLAIGLVVDDAIVVVEAVEHHIERGMAPKEAA
                     LKAMEEVSGPVIAIAIILSAVFIPTAFIPGITGRLYQQFAVTIAVSVILSAFNALSLS
                     PALAALLLKPKKKGTGLLQKFYDGFNRVFGRTTDGYVSACNLAIRKSGLSLLFLVGVV
                     VITGLLGKSLAASFLPEEDQGYLFAGVQLPDASSLQRTDDVARKAEEIIMKTPGVKDC
                     ATVVGYNMLSGVTQTYSTFFFINLEEWAKRKKPEEQYNAIKDHISRELRKIPGAIGFA
                     FPPPAIPGIGTSGGVTFILEDRAGKDLPFLAENVNKFMEAARKRPELANVNTTFLPSV
                     PQI"
BASE COUNT          270 a          533 c          476 g          256 t
ORIGIN      
        1 gtgaatcccg ccgggcaggt cggcgcggaa ccggcaccaa aagggcagga gttcacctac
       61 gcggtccgcg cgcaggggcg gctccagacc gaggaggagt tcggccggat cgtgatccgc
      121 gccagccccg atggctccat cctccgcctg aaggacgtgg cccgcgtcga actgggcgcg
      181 cagacgtaca gccagaacgg ccgcctcaac gggaagccgg cggccctggt cgccctctac
      241 cagatgccgg gcaccaacgc catcgaatcc gtgaagggca cccggaaact gatggaggag
      301 ctgaaaaccc gcttccccga cgacctggac tacacggtct gcctcgatac caccctggcg
      361 gtctccgaag ggatcaacga gatcgtccac acgctgttcg aggcgctcgc cctcgtcatc
      421 atcgtggtgt tcatcttcct ccaggggtgg cgggcgaccc tcatcccgct cctggcggtc
      481 ccggtgtcgc tggtcgggac gttcgccctc ttcccgctgt tcggcttctc catcaacacc
      541 ctctcgctct tcgggctggt cctcgccatc gggctcgtcg ttgacgacgc catcgtcgtc
      601 gtggaggcgg tggagcacca catcgagcgc ggcatggcgc cgaaggaggc ggccctcaag
      661 gcgatggagg aggtgtccgg gccggtcatc gccatcgcga tcatcctctc cgccgtcttc
      721 atcccgaccg ccttcatccc ggggatcacc gggcggctct accagcagtt cgccgtgacg
      781 atcgccgtct cggtcatcct ctcagcgttc aacgcccttt ccttgagccc cgcgctggcg
      841 gcgctgctgc tgaagccgaa gaagaagggg accgggctgc tgcagaagtt ctacgacggg
      901 ttcaaccggg tcttcggtcg gaccacggac ggatacgtaa gcgcctgcaa cctggcgatc
      961 cggaagagcg ggctgagcct cctcttcctg gtcggggttg tggtgatcac cgggctcctc
     1021 ggaaagtcgc tcgccgccag cttcctcccc gaggaggacc aggggtacct cttcgccggc
     1081 gtgcagctgc cggatgcctc ctccctgcag cgcaccgacg atgtcgccag gaaggccgag
     1141 gagatcatca tgaagacgcc gggggtgaag gattgcgcca ccgtcgtcgg gtacaacatg
     1201 ctgagcggcg tcacccaaac ctacagcacc ttcttcttca tcaacctgga ggagtgggcg
     1261 aagcgcaaaa aacccgagga gcagtacaac gcgatcaagg accacatttc ccgggaactg
     1321 cgcaagatcc cgggggccat cggattcgcc ttccccccgc ccgccatccc cggaatcggg
     1381 acttcgggag gggtcacgtt catcctcgaa gaccgggccg gcaaggacct cccgttcctc
     1441 gcggagaacg tcaacaagtt catggaggcg gcgcgcaaac ggcccgagct ggccaacgtc
     1501 aacaccacgt tcctcccctc ggtgccccag atctt
//
LOCUS       DATGYW010000456         1778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_249434, whole genome shotgun sequence.
ACCESSION   DATGYW010000456 DATGYW010000000
VERSION     DATGYW010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1778
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249434"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VK429_06325"
     CDS             <1..188
                     /locus_tag="VK429_06325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009303166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HLN91461.1"
                     /translation="HRQAAKACALLKAKAVIPMHYGTFPILEQTADRFVAELERVSPG
                     TRPIVLAPGEETTVVGA"
     gene            complement(373..1068)
                     /locus_tag="VK429_06330"
     CDS             complement(373..1068)
                     /locus_tag="VK429_06330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008869416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HLN91462.1"
                     /translation="MASVRIRWFGHSGFSIRDGKTVLVDPWFEGNPKAPGGVDSVHGA
                     DLLLLTHDHFDHAGDAVALARKTGALVVAIFELAGEMKAKGVPEAQLLHGGGGMNVGG
                     TVSVLGFEITMTEAHHSCGLGAPVGYVLQTPSGLTIYHAGDTGIFAGMALIGELYPID
                     VAMLPIGSVFTMDHRQAAKACALLKAKAVIPMHYGTFPILEQTADRFVAELAKVSPGT
                     RAIVLSPGEETTV"
     gene            1301..>1778
                     /locus_tag="VK429_06335"
     CDS             1301..>1778
                     /locus_tag="VK429_06335"
                     /inference="COORDINATES: protein motif:HMM:NF012509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91463.1"
                     /translation="MTVNAAIAVRSEVAVRPFRRGAASLSSGNFGIAVTAADTHGFSL
                     GGKMGLLSRALRHFPAVSGVEIRVCNEAPVGSGIGASSALLVALMLATGRLTGIPCRR
                     NEIAGAAMEIEAAHLKSLTGRQDHLAALRGGLQGIRFSPGRADVSRLPPWGPAGTML"
BASE COUNT          289 a          604 c          599 g          286 t
ORIGIN      
        1 atcaccggca ggcggcgaag gcgtgcgccc tcctcaaggc caaagcggtg ataccgatgc
       61 actacggaac gttcccgatc ctcgagcaga ccgccgaccg gttcgtcgcg gaattggaga
      121 gggtctcgcc gggcacgcgc ccgatcgtcc tcgccccggg ggaggagacg acggtcgtgg
      181 gagcttgatg ccgcgtttca taaatgcggt gccgtatcgg gaagacagca cggaagggtc
      241 acgctccggg agggtccggc ggagtcgccg caggaggggg ggcgcagtga ggtaaagcgc
      301 agccgtgcag gttcatcgca cggcgagcca cgaacggagc cccgccctcc gaggcgacgc
      361 agctgacccc gctcagaccg tcgtctcttc tcccggagac agcacgatcg cgcgagttcc
      421 cggagaaacc ttcgccaatt ccgcgacgaa ccggtccgcg gtctgctcga ggatcgggaa
      481 cgttccgtag tgcatcggta tcaccgcttt ggccttgagg agggcgcacg ccttcgccgc
      541 ctgccggtga tccatcgtga agacggaccc gatcggaagc atcgccacgt cgatcgggta
      601 cagttcgccg atgagcgcca tgccggcgaa gatccccgtg tcgccggcgt ggtagatggt
      661 gaggcccgac ggggtttgta gcacgtagcc gaccggggct cccagcccgc atgagtggtg
      721 cgcctccgtc atcgtgatct caaatcccag gacgctgacc gtcccgccca cgttcatccc
      781 gccccccccg tggaggagct gggcctcggg gacacctttt gccttcattt cccccgccag
      841 ctcgaagatc gccacgacga gggcccccgt tttcctcgcc agcgcgaccg cgtcgcctgc
      901 gtggtcgaag tggtcgtgcg tgaggagcaa caggtccgcg ccgtgcacgg agtccacccc
      961 tcccggcgcc ttcgggttcc cctcgaacca cgggtcgaca agcaccgtct tcccgtcccg
     1021 aatggaaaag ccggaatgcc cgaaccagcg gatccgcacc gatgccatgg ccgccctcct
     1081 tcgctcgatg ggagtgtcgt aattcctata taacggtacg gcgcccgatc cgtaaaggga
     1141 aaatggtccc tactcgccac agggcgcccg tgataaaaag gggatggcat gacaacgaac
     1201 agcgtcggca catttcgccc cttccgggtg gtggttccca accgcgtgga catcgcgggg
     1261 ggggccctcg atatctaccc cttgcctgat cggggacgcg atgacggtga acgccgccat
     1321 cgcggtccgc agcgaggtcg ccgtgcgccc gttccgacgc ggtgcggcaa gcctgtcctc
     1381 gggaaatttc gggatcgcgg tcaccgcggc cgacacccac ggcttctccc tcggggggaa
     1441 gatgggtctt ctctcccggg ccctgcgtca tttcccggcg gtgtccggtg tcgagatccg
     1501 ggtgtgcaac gaagcgccgg tcggttccgg gatcggcgcg tcgtccgccc tgctggtcgc
     1561 cctgatgctg gcgaccggaa ggctgaccgg gatcccgtgc cgccggaacg agatcgccgg
     1621 cgcggcgatg gagatcgagg cggcccacct gaagagcctg accggccggc aggaccacct
     1681 ggcggcgctg cgcggcggcc tccaggggat ccggttttcc cccgggcggg ccgacgtgag
     1741 ccgtctccct ccatgggggc cggcagggac gatgctac
//
LOCUS       DATGYW010000457         2823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_310266, whole genome shotgun sequence.
ACCESSION   DATGYW010000457 DATGYW010000000
VERSION     DATGYW010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2823
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310266"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..1395)
                     /locus_tag="VK429_06340"
     CDS             complement(160..1395)
                     /locus_tag="VK429_06340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012529271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HLN91464.1"
                     /translation="MRLPIEFYIARKYLLAKRKQTFISIITFISIGGVTVGVMALIIV
                     LAVMGGFERELKERILGATAHAHITSLNGSIENPFAVTEKVRKVDGVVAASPYIFTPM
                     MIASGSGAVGGVLRGVDTATVGDVTRLRRDLRVGRLEDLHRATKDGLPGVLLGKELAG
                     NLGVGRGDVIEVLVPGGTITPLGAFPKTARFRVVGVSESGMYEYDATFAYVDFEEAGR
                     LLGMEGRATGIEVKVRDVYEAGAVARRIRSALGYPFWAKDWMQSNRNLFSALKLEKVV
                     MFVILVLIVMVAAFNIISTLIMVVMEKTKDIAVLMTLGATRRSIRRIFAIEGLIIGVA
                     GTALGTVLGALLCVLLQRYRFISLPSDVYYISTLPVALEPGTVLLVVVSSVLICFLAT
                     LYPAVQASRVDPAEAIRYE"
     gene            complement(1402..>2823)
                     /gene="lysS"
                     /locus_tag="VK429_06345"
     CDS             complement(1402..>2823)
                     /gene="lysS"
                     /locus_tag="VK429_06345"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015719080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HLN91465.1"
                     /translation="GRNPWPNDQAPGWTNAGARAAAEGRTPDELAARPIRVDVAGRVM
                     GLRRFGKAAFLVLSDRSGRLQAYLKKDHLGEEAYDLFLKSVDAGDIVWVDGPLFLTRT
                     GELTVEASSFRLLAKAIRPLPEKWHGLSDIETRYRQRYVDLIVNEEVREIFRRRARIV
                     AFIRSFLTTRDFLEVETPMMQTVAGGATARPFVTHHNALDMDLYLRIAPELYLKRLLV
                     GGFERVFEINRNFRNEGIDTQHNPEFTMIEFYQAYATYTEMMALTEEMLSSLATELFG
                     APRFTYQGETVDFTPPWERLTVAQAAARHGGFPEERLSDEAFLRETAGRLGVKDAATA
                     SPGNLLVAIYEEVAERKIVGPTFVTEYPIDVSPLSRRNDERPGIVDRFELIVRGREIA
                     NAFSELNDPVDQRERFDEQIRKRERGDEEAHFMDEDYLRALEHGMPPAAGEGIGIDRL
                     VMLLTDSPSIRDVILFPQLRKEG"
BASE COUNT          467 a          992 c          908 g          456 t
ORIGIN      
        1 aggatctgga gcagcgtcgt tttcccggcg cccgaaatcc cgaccacccc ggccgtctcc
       61 ccccgcgcga gggagaggga gacccccttc agcacctcga tgtcgtaccc gtcgcggtgg
      121 aacaccttcc gcacctcccg ggcctccagg gcgggcgttt cactcatacc ggatcgcctc
      181 cgcggggtcc acgcgggacg cctgaaccgc gggatacagg gtggcgagga agcagatcag
      241 gacggagctg acgaccacga gaaggacggt ccccggttcg agggcgacgg gaagggtcga
      301 gatgtagtag acgtcgctcg gaaggctgat gaaccggtac cgctggagaa gaacgcacag
      361 cagcgcgccg aggacggtcc ccagggccgt tccggcaaca ccgatgatca gcccctcgat
      421 ggcgaagatc ctgcggatcg agcgtcgggt cgcccccagc gtcatcagga cggcgatgtc
      481 cttcgtcttc tccatcacga ccatgatcag ggtggagatg atgttgaagg ccgcgaccat
      541 cacgatgagg acgaggatga cgaacatgac caccttttcg agcttcaggg cggagaagag
      601 gttccggttg ctctgcatcc agtccttcgc ccagaacgga tacccgaggg ccgaccggat
      661 ccgccgggcg accgcgccgg cctcgtagac gtccctcacc ttgacctcta tccccgtggc
      721 gcgcccctcc attcccaaca ggcgtccggc ctcctcgaag tcgacgtagg cgaaggtggc
      781 gtcgtactcg tacatccccg actcggaaac gccgacgacg cggaaccggg ccgtcttcgg
      841 gaacgccccg agcggggtga tcgtgccgcc gggcaccagg acctcgatca cgtccccccg
      901 tcctacgccg aggttccccg cgagctcctt ccccaggagg acgcccggca gtccgtcctt
      961 cgtcgcccga tggagatcct cgagccgccc gacccggagg tcgcgccgca ggcgggtgac
     1021 gtcgccgacc gtcgccgtgt ccacgccgcg gagcacgccg ccgacggcgc cgctccccga
     1081 ggcgatcatc atcggggtga agatgtacgg ggaggccgcg accacgccgt cgaccttgcg
     1141 caccttctcc gtcacggcga acgggttctc gatgcttccg ttcaggctgg tgatgtgggc
     1201 gtgcgcggtg gccccgagga tccgctcctt cagctcgcgc tcgaacccgc ccatcaccgc
     1261 gagtacgatg atcagcgcca tcactccgac ggtgaccccg ccgatcgaga tgaaggtgat
     1321 gatcgagatg aacgtctgct tccgcttcgc cagaaggtac ttccgggcga tgtagaactc
     1381 gatgggaagg cgcaccctcc cctacccctc tttccggagc tgggggaaca ggatcacgtc
     1441 gcggatcgac ggggagtcgg tgagcagcat cacgagccgg tcgatcccga tcccctcccc
     1501 ggccgccggc ggcatcccgt gctcgagcgc ccggaggtaa tcctcgtcca tgaaatgggc
     1561 ctcctcgtcg ccccgttcgc gcttgcggat ctgctcgtcg aaccgttccc gctggtccac
     1621 cgggtcgttc agctcggaga aggcgttggc gatctcccgt ccgcggacga tcagctcgaa
     1681 ccggtcgacg atccccggcc gttcgtcgtt gcgacgcgag agcggagaga cgtcgatcgg
     1741 gtattccgtg acgaaggtcg gcccgacgat cttcctctcg gccacctcct cgtagatcgc
     1801 caccagcaga ttcccggggg acgccgtcgc cgcgtccttc accccgagcc gcccggccgt
     1861 ctcccgcagg aacgcctcgt cggagaggcg ctcctcgggg aaccccccgt ggcgggccgc
     1921 ggcctgcgcc accgtcaggc gctcccaggg cggggtgaag tcgaccgtct ctccctggta
     1981 ggtgaacctc ggcgctccga acagctccgt cgccagggag gagagcatct cctccgtcag
     2041 cgccatcatc tccgtatagg tggcgtacgc ctggtagaat tcgatcatcg tgaattcggg
     2101 gttgtgctgg gtgtcgatcc cctcgttccg gaagttccgg ttgatctcga agacgcgctc
     2161 gaacccgccg accaggagac gcttcagata gagttccgga gcgatccgca ggtacaggtc
     2221 catgtcgagg gcgttgtggt gggtcacgaa cgggcgcgcc gtcgctcccc ccgccaccgt
     2281 ctgcatcatc ggggtctcga cctcgaggaa gtcccgcgtc gtcaggaagg agcggatgaa
     2341 ggcaacgatc cgcgcacgtc gccggaagat ctcccggact tcctcgttga cgatcaggtc
     2401 cacgtaccgc tgccggtagc gggtctcgat gtcggagagc ccgtgccact tctcgggaag
     2461 gggacggatc gccttcgcca acaggcggaa gctcgaagcc tcgacggtca actcgcccgt
     2521 ccgggtgagg aacaggggcc cgtccaccca gacgatgtct cccgcgtcga cggatttcag
     2581 gaagaggtcg tacgcctcct ccccgaggtg atcctttttc aggtacgcct gcagccggcc
     2641 cgaccggtcg gacaaaacga ggaaagccgc cttcccgaag cgccgaagac ccatcacccg
     2701 cccggcgacg tccacccgga tcggccgcgc ggccagttcg tccggggtcc gcccttccgc
     2761 ggcggcgcgg gcccccgcgt tggtccaccc cggggcctgg tcgttcggcc aaggattgcg
     2821 ccc
//
LOCUS       DATGYW010000458         2064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_508095, whole genome shotgun sequence.
ACCESSION   DATGYW010000458 DATGYW010000000
VERSION     DATGYW010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_508095"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..277
                     /locus_tag="VK429_06350"
     CDS             <1..277
                     /locus_tag="VK429_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012471621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HLN91466.1"
                     /translation="MEQYAREGMEAFLTAHFDGLPGVETRMASGVPYREIVREARECG
                     AGLIVIGTHGRTGVERVIFGSTAEKVVRMAPCPVLSVREGGKEFVHP"
     gene            315..1598
                     /gene="eno"
                     /locus_tag="VK429_06355"
     CDS             315..1598
                     /gene="eno"
                     /locus_tag="VK429_06355"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HLN91467.1"
                     /translation="MTMIVDVHGREVLDSRGNPTVEVEVLLESGAEGTAIVPSGASTG
                     TREAVELRDGDPKRFMGKGVTKAVRNVNRVIAPKLIGYDATEQVLVDRMLIDLDGTEN
                     KGKLGANAILGASIAVARAAAEACGLPLYRYLGGVGGCTLPVPMMNILNGGSHADNNM
                     DIQEFMVMPVGAKSFSEALRMGVETFHNLKKVLKGKGLNTNVGDEGGFAPQLRSNAEA
                     IEVILEAVAKAGYRPGRDVCIALDSAASEFREKGKYVFRKSDKSKRDSAQMVAFYENL
                     CRQYPIISIEDGFSEDDWEGWKMFTDAMGKKIQIVGDDVFVTNPSILRKGIAKGVANS
                     VLIKLNQIGTVTETIEAIEMAKRAGWTAIVSHRSGETEDSTIADLVVGLSTGQIKTGS
                     ASRTDRIAKYNQLLRIEEELGPAARFDGRGVFYNL"
     gene            1600..>2064
                     /locus_tag="VK429_06360"
     CDS             1600..>2064
                     /locus_tag="VK429_06360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006002470.1"
                     /note="catalyzes the interconversion of 2-phosphoglycerate
                     and 3-phosphoglycerate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HLN91468.1"
                     /translation="MKRPFVALIIMDGWGHREEKEGNAVALADTPFFDRLWAGFPRTL
                     IHASEERVGLPAGQMGNSEVGHLNLGAGRVVYQDLVRISKSVRTGDFFRNPALCAAMD
                     AAMGNGKALHLVGLLSDGGVHSLHTHLYALLRMAKERGVPRVCLHPVFDGRDT"
BASE COUNT          380 a          617 c          742 g          325 t
ORIGIN      
        1 gatggaacag tacgcccgcg aggggatgga ggcgttcctc acggcccact tcgacgggct
       61 cccgggagtg gagacccgga tggcttccgg cgttccctac cgggagatcg ttcgcgaagc
      121 ccgggaatgc ggggccgggc tgatcgtcat cgggacgcac ggccgcaccg gggtggagcg
      181 cgtgatcttc ggcagcacgg ccgagaaggt cgttcgcatg gcgccgtgtc ccgtgctttc
      241 ggtccgggaa ggtggaaagg aattcgttca tccgtaattc gaaccaccta tttcgctcgg
      301 aggaggaacg ccccatgacg atgatcgtcg atgtgcacgg aagggaggtc ctggactccc
      361 gcgggaaccc gaccgtcgag gtcgaggtgc tgctggagtc cggcgcggaa gggacggcga
      421 tcgtcccctc cggcgcgtcg accgggaccc gcgaggccgt ggagctgcgc gacggcgacc
      481 cgaagcggtt catggggaag ggcgtgacga aggcggtccg caacgtgaac cgggtgatcg
      541 cacccaagct gatcggatac gacgcgacgg agcaggtcct ggtcgaccgg atgctgatcg
      601 acctcgacgg caccgaaaac aaggggaagc tgggggcgaa cgcgatcctc ggcgcctcga
      661 tcgcggtggc ccgggcggcg gcggaggcgt gcggccttcc gttgtaccgg tacctcggcg
      721 gcgtcggagg gtgcaccctc cccgtcccga tgatgaacat cctgaacggc ggctcccacg
      781 ccgacaacaa catggacatc caggagttca tggtgatgcc ggtgggggcg aagagcttct
      841 ccgaggcgct ccggatgggg gtcgagacgt tccacaacct gaagaaggtg ctgaagggga
      901 aggggctgaa cacgaacgtc ggcgacgagg gagggttcgc cccccagctg cggtccaacg
      961 ccgaggcgat cgaggtgatc ctggaggcgg tcgcgaaggc cgggtacagg ccggggaggg
     1021 acgtctgcat cgccctcgac tccgccgcct ccgagttccg cgagaagggg aaatacgtgt
     1081 tccgcaaatc cgacaaatcg aagcgggact cggcgcagat ggtcgcgttc tacgagaatt
     1141 tgtgccggca gtacccgatc atctcgatcg aggacggctt ctccgaggac gactgggaag
     1201 gatggaagat gttcacggac gcgatgggga agaagatcca gatcgtgggt gacgacgtct
     1261 tcgtcaccaa tccctcgatc ctgcggaagg ggatcgcgaa gggggtggcc aactccgtcc
     1321 tcatcaagct gaaccagatc ggcaccgtga cggagacgat cgaggcgatc gagatggcga
     1381 agcgcgcggg gtggaccgcc atcgtgtccc atcgatccgg cgagaccgag gacagcacga
     1441 tcgccgacct cgttgtgggg ctctccaccg gacagatcaa gaccggctcc gcctcgcgga
     1501 ccgaccggat cgcgaagtac aaccagttgc tccggatcga ggaggaactc ggcccggcag
     1561 cccggtttga cgggcgggga gtgttctata atctctgaga tgaaacgtcc gttcgtcgcg
     1621 ctgatcatca tggacggctg gggccatcgc gaggagaagg aagggaacgc ggtggccctt
     1681 gccgacacgc cgttcttcga ccggctttgg gcggggttcc cccgaaccct gatccacgcc
     1741 tcggaggagc gcgtgggact tccggccggc cagatgggga actccgaggt cgggcacctg
     1801 aacctcgggg cgggacgggt tgtgtaccaa gacctcgtcc ggatctcgaa gtccgtccgg
     1861 accggcgatt tcttccggaa ccccgctctt tgcgccgcca tggacgcggc gatgggaaac
     1921 gggaaagcgc tgcacctggt gggcctgctc tccgacggcg gcgtgcactc ccttcacacg
     1981 cacctttacg cgctgcttcg gatggcgaag gagcgcggtg tcccgagggt gtgtctccac
     2041 cccgtgttcg acgggcggga cact
//
LOCUS       DATGYW010000459         1527 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_186644, whole genome shotgun sequence.
ACCESSION   DATGYW010000459 DATGYW010000000
VERSION     DATGYW010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186644"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..951
                     /locus_tag="VK429_06365"
     CDS             <1..951
                     /locus_tag="VK429_06365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase family protein"
                     /protein_id="HLN91469.1"
                     /translation="LIAGGTKASFLGNRGRTATIITTGGHFTSSVIESMARSRFPRLS
                     GRNRTFSLLDPLPDLVRALNEYRPAVIGSYPTALAVLAGEQAAGRLRIRPALALSGAE
                     RLSPAAAERIKASFHCPLHDTYAASEFMGIAFDCRYGHLHLNADWVILEPVDAALRPV
                     PPGTPSHSTLLTNLANRVQPILRYDIGDSITMLTTRCPCGSPLPLVRPEGRRDEILYL
                     ESPDGGEKPILPLVLATIVEETEGILSYQVIRAGPGRLRVRVDEAPGYDRTRVCNDLL
                     RHLREYLSSMNLGSVVVELTGERPVRDPSGGKLRQFYAER"
     gene            1007..1081
                     /locus_tag="VK429_06370"
     tRNA            1007..1081
                     /locus_tag="VK429_06370"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1039..1041,aa:Val,seq:cac)
     gene            complement(1167..>1527)
                     /locus_tag="VK429_06375"
     CDS             complement(1167..>1527)
                     /locus_tag="VK429_06375"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HLN91470.1"
                     /translation="VRLAEGDFLEDPLGGPYDFVWISQILHAYSGSDCVKLLRRARSA
                     LVPGGRAAVQEFLLSEGKTSPPGPVFFSVHMVAVTGGGRAYTAREIAAMMKAAGFRNI
                     SADRPDPRGVGILRAFR"
BASE COUNT          253 a          525 c          486 g          263 t
ORIGIN      
        1 ctgatcgcgg gcgggaccaa ggcttctttc cttggaaacc ggggccgtac ggctaccatc
       61 atcacaacgg gggggcactt taccagttcc gtcatcgagt ccatggcccg gtcccgcttc
      121 ccgagactgt ccggccgcaa ccggacgttc tcccttctgg atcccctgcc cgacctcgtg
      181 cgtgcgttga acgagtaccg gcccgcggtc atcgggagct atcccaccgc gctggccgtt
      241 cttgccgggg agcaggcggc gggccgcctg cggatccggc cggccctggc gctttccggg
      301 gcggagcggc tttctcccgc cgccgcggag cggatcaagg cgtcctttca ctgcccactg
      361 cacgacacgt atgccgcctc ggaattcatg gggatcgcat tcgactgccg gtacggccac
      421 cttcacctca acgctgactg ggtcatcctg gaaccggtgg atgccgcgct gcgtcccgtt
      481 ccgccgggga caccctccca ttccaccctg ctgaccaacc tggcgaaccg ggtccagccg
      541 atcctccgtt atgacattgg ggacagcatc acgatgctca ctacccgatg tccatgcggc
      601 agcccgctcc ccctggttcg gcccgagggg cggcgtgacg agatcctgta cctcgaatcg
      661 ccggatggag gggagaaacc gattcttccc ctggtgctgg ccacgattgt agaagagacg
      721 gaaggaatcc tgagttatca ggtgatccgg gcagggccgg ggcgtcttcg cgtgcgcgtc
      781 gacgaggccc ccggatacga tcgcacgcgg gtctgcaatg acctcctccg ccatctccgg
      841 gagtacctgt cctccatgaa cctcgggtcc gtggttgttg aactgaccgg ggaaaggccg
      901 gttcgcgacc catcgggcgg gaaactgcgc cagttctacg ccgagcggtg aggtgagaaa
      961 aaaccgttga acgggtcacg ggggaaggta caataggggt ctcttggggc gcttaactca
     1021 gcggtagagt gccaccttca cacggtggaa gtcacaggtt caagtcctgt agcgcccacc
     1081 atgagaacca aagcctctcc tgcatcggag gggcttttcc tttcccccgg atggagggcg
     1141 ctccttccct tcggagcgcc gccgtcctac cggaacgccc gcaggatgcc gacgccgcgt
     1201 gggtcggggc gatcggcgga gatgttccgg aatcccgccg ccttcatcat cgccgcgatc
     1261 tcccgggccg tgtacgcccg tccgcccccg gtcaccgcca ccatgtggac ggagaagaag
     1321 accggccccg gtggggaggt cttcccctcc gagagcagga actcctggac tgccgcacgc
     1381 cctcccggga ccagggcgga ccgcgcccgg cgcagcagct tcacgcagtc cgacccggag
     1441 taggcgtgca ggatctggga gatccacacg aagtcgtacg gcccgcccag gggatcctcg
     1501 aggaaatccc cctcggcgag gcgcacc
//
LOCUS       DATGYW010000460         3356 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_470316, whole genome shotgun sequence.
ACCESSION   DATGYW010000460 DATGYW010000000
VERSION     DATGYW010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3356
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_470316"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VK429_06380"
     CDS             complement(<1..386)
                     /locus_tag="VK429_06380"
                     /inference="COORDINATES: protein motif:HMM:NF019003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase
                     selenoprotein B family protein"
                     /protein_id="HLN91471.1"
                     /translation="MAPVDYIPRIRDNYARLGYKTYSWVVNADTPPWAPLSKPLSRCR
                     LGLAASGGIYATGQVAFHYKDDTSFREIPTDVDTKDLRATHFAYDLSDARTDPNVVFP
                     IDTLRRLVREGFLGGLASRFYTFMGG"
     gene            complement(442..1818)
                     /locus_tag="VK429_06385"
     CDS             complement(442..1818)
                     /locus_tag="VK429_06385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018290521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HLN91472.1"
                     /translation="MIDRAIPLLYLAAAASFILALKWLSSVPTARRGVVVGAAGMALA
                     VAGTLMKPEIESYRWIAVAFVAGTAIGVPMAMMPMTAVPQRTALSHAFGALAAALVGA
                     AEFYLQAPAIDRFTMGALVLEVLLGSLTFTASLMAFGKLQEILPTRPITWRHQNILNF
                     TLLGLAVASGAYLVARPDAIRLFPVFGGLALVFGVMLIIPIGGADMPTVISLLNSYAG
                     LSAAAMGFVLDNKLLIIAGALDGSSGFILSVIMCRAMNRSFTNVLFGAFGQVQATTGA
                     SQEQRTVHSATPEEAAGVLQAASRVIVVPGYGMAVAQAQHKVRELYEALTKAGIDVRF
                     AIHPVAGRMPGHMNVLLAEANIPYDRLVEMEEVNSDFPQADVALVIGANDVTNPAARH
                     DRNSPIYGMPILDVDKARTVMVIKRSMSPGFAGIENELYFMDRTLMVFGDAKAVVGNI
                     AKEFTGGA"
     gene            complement(1815..2111)
                     /locus_tag="VK429_06390"
     CDS             complement(1815..2111)
                     /locus_tag="VK429_06390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011685108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HLN91473.1"
                     /translation="MSPSLEMGLYVFVLATFLGLEIIRRVSPLLHTPLMSLTNAISAI
                     TIVGSILVAGEQKTTLSTVLGTLAVTCSMINIVGGYLITYRMLRMFRKSGKDRR"
     gene            complement(2131..3264)
                     /locus_tag="VK429_06395"
     CDS             complement(2131..3264)
                     /locus_tag="VK429_06395"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015151531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HLN91474.1"
                     /translation="MKIAVPREIREGERRIALVPESCRKLVKAGIEVSIESGAGAQAF
                     FPDDAYREAGASVGENAASVLGGADFILKVQAPAPYPSAGAHEVDAMREGAILLCTLM
                     PSRHPDAVARLAARRVTSFATDRIPRITRAQSMDTLSSMANISGYKAILVAANALPRY
                     FPMLTTAAGTVLPAKVFVIGAGVAGLSAVATARRLGASVEATDTRPVAKEQVESLGAR
                     FVGVDTGENAQDASGYARELSDDFYRKQAELLADRCAASDVVITTALIGGVKAPRLIT
                     AEMVHGMKPGSVIVDAAAEGGGNCALTRPGETIVEGGVTICGPLNLPAEMPWHASTLY
                     SRNLAAFVLAFWKDGRFTLDLDDEILRGALVTHGGEVRLPTVN"
BASE COUNT          554 a         1106 c         1149 g          547 t
ORIGIN      
        1 atcccgccca tgaacgtgta gaagcggctc gccagcccgc cgaggaaccc ctcccgaaca
       61 agacggcgca gcgtgtcgat cgggaagacg acgttcgggt ccgtgcgcgc gtcggacagg
      121 tcgtaggcga agtgggtggc gcgcagatcc ttcgtgtcga cgtccgtcgg gatctcccgg
      181 aacgaggtgt cgtccttgta gtggaacgcc acctggccgg tggcgtagat cccccccgag
      241 gcggccaacc ccagccggca tcgcgacaac ggtttggaaa gcggcgccca cggaggggtg
      301 tcggcgttga cgacccagct gtaggtcttg tagcccagcc gcgcgtaatt gtcgcggatc
      361 ctcggaatgt agtctacggg tgccatgggg ttctcccgga ttccatagta tcccaagccg
      421 tcccgttcgt ctcgtgccgg atcaggcgcc tccggtgaat tccttcgcga tgtttccgac
      481 aaccgctttg gcgtcgccga agaccatcag cgtccggtcc atgaaataca gctcgttctc
      541 gatccccgcg aatcccgggc tcatgctccg cttgatcacc atcaccgtgc gcgccttgtc
      601 cacgtcgagg atcggcatcc cgtagatcgg actgttcctg tcgtggcgcg ccgcggggtt
      661 cgtgacatcg ttggcgccga tcacgagggc cacgtcggcc tgcgggaagt cggagttcac
      721 ctcctccatc tcgaccagcc ggtcgtaggg tatgttcgcc tcggcgagga gcacgttcat
      781 gtgccccggc atccgtcccg ccaccgggtg gatggcgaac cgcacgtcga tacccgcctt
      841 cgtcagcgct tcgtacagct cccggacctt gtgctgcgcc tgggcgacgg ccatgccgta
      901 gccggggacg acgatcacgc ggctcgcggc ctgcaggacc ccggcggcct cttccggcgt
      961 ggcgctgtgg acggtgcgct gctcctggga ggccccggtc gtcgcctgca cctggccgaa
     1021 agcgccgaac agcacgttgg tgaacgagcg attcatcgcc cggcacatga tcaccgacag
     1081 gatgaagccg gaggagccgt cgagcgcgcc ggcgatgatc agcagcttgt tgtcgagcac
     1141 gaaccccatc gctgcggccg acaggcccgc gtaggagttg aggagggaga tcaccgtcgg
     1201 catatccgcg ccgccgatgg ggatgatgag catcaccccg aacacgagcg cgaggccccc
     1261 gaaaaccggg aacagccgga tcgcgtccgg gcgggcgacg aggtatgctc ccgacgccac
     1321 cgcgaggccg aggagcgtga aattgaggat gttctggtgc cgccacgtga tggggcgggt
     1381 ggggaggatc tcctggagct tcccgaacgc catcagcgat gcggtgaagg tgagggagcc
     1441 gaggagcacc tcgaggacca gcgctcccat ggtgaagcgg tcgatggcgg gagcctgcag
     1501 gtagaattcg gccgctccca ccagcgcggc cgcaagggcc ccgaaggcgt gggagagagc
     1561 ggtccgctgc ggcacggcgg tcatcggcat catcgccatc gggacgccga tggcggtgcc
     1621 cgcgacgaag gcgaccgcga tccaccggta gctttcgatc tccggcttca tcagcgtccc
     1681 ggcgaccgca agcgccatcc cggccgcccc cacgaccacg ccccgacggg ccgtggggac
     1741 cgacgagagc cacttgagcg cgaggatgaa ggacgcagcc gcggcgagat agaggagggg
     1801 gatcgcccgg tcgatcatcg gcggtccttc ccgcttttcc tgaacatccg gagcatgcgg
     1861 taggtgatca ggtatccgcc gacgatgttg atcatggaac aggtcacggc gagggtgccg
     1921 aggacggtgg agagggtcgt cttctgctcg ccagcgacca ggatggagcc gacgatcgtg
     1981 atggccgaga tggcgttcgt cagggacatc aggggggtgt gaaggagcgg cgacaccctg
     2041 cggatgatct ccagaccgag gaaggtggcc agtacgaaga cgtagagtcc catttcgagg
     2101 gatggactca tggttcctcc ttggtgtccg tcaattcacc gtggggagtc tgacctcgcc
     2161 tccgtgggtc acgagggcgc cccgcaggat ctcgtcgtcc aggtcgaggg tgaaccgtcc
     2221 gtccttccag aaggcaagga cgaacgccgc caggttgcgc gagtaaagcg tgcttgcgtg
     2281 ccagggcatt tcggcgggga gattgagggg accgcagatc gtcacgccgc cctcgacgat
     2341 cgtctccccc ggacgggtca gtgcgcagtt gcctccgccc tcggcggccg cgtccacgat
     2401 caccgagccc ggcttcatcc catgcaccat ctccgcggtg atgagcctgg gcgccttcac
     2461 gccgccgatc agcgccgtcg tgatgacaac gtccgacgcc gcgcaccggt ccgcgagaag
     2521 ctccgcctgc ttcctgtaga agtcatccga gagctcccgg gcgtaccccg aggcatcctg
     2581 ggcgttctca ccggtgtcga cccccacgaa cctcgccccc aggctctcca cctgctcctt
     2641 cgccacggga cgcgtgtcgg tggcctccac gcttgctccg aggcgacgcg cggtggcgac
     2701 cgccgagagc cccgccaccc ccgcgccgat cacgaagacc ttcgcgggga gcacggttcc
     2761 ggcggcggtc gtgagcatcg ggaagtaccg tggaagcgcg ttggcggcga ccaggatcgc
     2821 cttgtacccg gagatgttcg ccatggagga gagggtgtcc atcgattgcg cgcgggtgat
     2881 gcggggaatc cggtccgtgg cgaaggaggt gacccggcgg gccgccagcc ttgccaccgc
     2941 gtcggggtgg cgcgaaggca tcagggtgca aaggagaatc gccccctcgc gcatcgcgtc
     3001 gacctcgtgc gcgccggcgg acgggtaggg ggcgggggcc tgcaccttca ggatgaagtc
     3061 cgccccgccc agcaccgatg cggcgttttc cccgacggaa gctcccgcct cgcggtaggc
     3121 gtcgtcggga aagaacgcct gcgccccggc gccgctctcg atcgatacct cgatgcccgc
     3181 tttcaccagc ttccggcacg actcggggac gagggcgatt ctccgttctc cctcccggat
     3241 ctcccgtgga accgcgatct tcatggcccc cccgttcctc gggcggctgc aggatagtgg
     3301 accggatggg aatagtttag cggagtagcg ctcggaaacc tattcgctcc ggtgag
//
LOCUS       DATGYW010000461         1567 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_470468, whole genome shotgun sequence.
ACCESSION   DATGYW010000461 DATGYW010000000
VERSION     DATGYW010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_470468"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1027
                     /locus_tag="VK429_06400"
     CDS             <1..1027
                     /locus_tag="VK429_06400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014552167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HLN91475.1"
                     /translation="SRIPGGSSGGTAAAVAAAMCFAGVGTDTGGSIRQPASLCGVVGV
                     KPTYGRVSRYGMIAFASSLDQGGPIARTVADAAALLGVIAGYDRRDSTCVDIPVPDYL
                     AAVESPVKGLRVGLPKEYYEGEGLSPEVRAAVEKALMALTDQGAVVVEVSLPHTSFAL
                     STYYLIAPAEASSNLARYDGVRYGYRSEGATGLIEMMSRTRAEGFGDEVKRRIMIGTY
                     ALSAGYYDAFYGKAQKVRTLIRDDFAKAFEAADVLLTPTAPTPAFRLGEKTGDPLTMY
                     LSDIYTIPCNLAGIPGISVPCGFSAEGLPIGAQLLSKSFREETLFTAAGAIERALPLR
                     RVAPLEG"
     gene            1034..>1567
                     /locus_tag="VK429_06405"
     CDS             1034..>1567
                     /locus_tag="VK429_06405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     GatCAB subunit B"
                     /protein_id="HLN91476.1"
                     /translation="MAFETVIGLEVHAQLSTKSKIFCACSTAFGAAPNENTCPVCTGM
                     PGVLPVLNRKAVEFTIRTALATSCAVQRRSVFARKNYFYPDLPKAYQISQYELPIALG
                     GHVDIEVDGGTKRIGITRIHMEEDAGKLVHEGEFAGAQASLADLNRCSVPLMEIVSEP
                     DMRTPEEGGAYLRRLHDI"
BASE COUNT          243 a          534 c          544 g          246 t
ORIGIN      
        1 gtcccgcatc ccgggcggct cttcgggggg aacggcggcg gcggtggccg ccgcgatgtg
       61 cttcgccggc gtcgggaccg acaccggcgg atcgatccgc cagccggcct ccctgtgcgg
      121 cgtggtgggc gtcaagccga cgtatggccg ggtatcgcgc tacgggatga tcgccttcgc
      181 gtcctcgctc gaccagggcg gcccgatcgc gcggaccgtg gccgacgcgg cggcgctgct
      241 cggcgtgatc gcggggtacg accggcgcga ttcgacctgc gtggacatcc cggtgccgga
      301 ctacctcgct gccgtggaga gcccggtcaa ggggctccgc gtcggccttc cgaaagagta
      361 ttacgagggc gaggggcttt cccccgaggt ccgtgcggcg gtggaaaagg cgctgatggc
      421 gttgaccgat cagggcgccg tcgtggtgga ggtctcgctt ccgcacacgt cgttcgccct
      481 ctccacgtac tacctcatcg cccccgcgga ggcgtcgtcc aacctcgcgc ggtacgacgg
      541 cgtccggtac ggatacaggt cggaaggggc gaccggcctg atcgagatga tgtcgaggac
      601 gcgggcggag gggttcggcg acgaggtgaa gcgccgcatc atgatcggca cctatgcgct
      661 ctccgcaggc tactacgacg ccttctacgg gaaggcgcag aaggtccgaa ccctgatccg
      721 ggacgatttc gcgaaggcgt tcgaggcggc ggacgtgctc ctcaccccca ccgccccgac
      781 cccggcgttc cgcctcgggg agaagacggg cgatcccctc acgatgtacc tgtccgacat
      841 ctacacgatc ccgtgcaacc tggcaggcat cccggggatc tccgtgccgt gcggcttttc
      901 cgcggaggga cttcccatcg gggcgcagct tctctcgaaa tcgttccggg aggagacgct
      961 cttcaccgcg gccggggcga tcgagcgcgc ccttccgttg cggcgcgtgg cgccattgga
     1021 gggataggaa ccgatggcgt tcgagacggt catcgggctg gaggtccacg cccagctctc
     1081 cacgaagagc aagatcttct gcgcctgctc gacggcgttc ggggccgccc ccaacgagaa
     1141 tacctgcccc gtgtgcaccg gcatgccggg cgtgctcccg gttctcaacc gcaaggccgt
     1201 ggaattcacg atccgcacgg cgctcgccac ctcctgcgcg gtgcagcgca ggagcgtctt
     1261 cgcccggaag aactacttct acccggacct ccccaaggcg taccagatct cgcagtacga
     1321 gctgccgatc gccctcggag gccacgtcga catcgaggtc gacggcggga cgaagcggat
     1381 cgggatcacg cggatccaca tggaggagga tgcagggaag ctcgtccacg aaggggagtt
     1441 cgccggcgcc caggcgtcgc tcgcggatct caaccggtgc tccgtccccc tgatggagat
     1501 cgtctccgaa cccgacatgc gcacgccgga agagggcggc gcgtacctgc ggcgcctgca
     1561 cgacatc
//
LOCUS       DATGYW010000462         1579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_416737, whole genome shotgun sequence.
ACCESSION   DATGYW010000462 DATGYW010000000
VERSION     DATGYW010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416737"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1522
                     /locus_tag="VK429_06410"
     CDS             <1..1522
                     /locus_tag="VK429_06410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007294532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HLN91477.1"
                     /translation="SQWTIFLLFVFLFLNTEYKDNDVLPYAVNLFLRLDPLMAGAATL
                     AGRALIGLVWPALVLTLLTVLLGRFFCGWFCPLGAVIDATDATVFRKARRKDAVPVSW
                     RRYKFLVLFFLAASSLFTMQWVFLFDPISILIRTFTVSVFPALNLVLHRIFDSLYRAP
                     GPIPAVSEPVYGFLKAHFLAFEQPVFRTSVIVGFLFLGILAAEKYQRRFWCRNLCPLG
                     ALLALTGRFGLFRRRITEAGCTRCGLCEADCRMGAIGGDVAVTDHGECIECMDCQAIC
                     PTEVIRFSGKEGRKSAAVDLTRRGVLAAAALGAVTVPFFRVEAHGKARDPLLIRPPGA
                     LPEGEFLARCTRCGECMRVCIANGLQPTWFEAGIEGMWSPILVPRIGYCEFNCTLCGQ
                     VCPTGAIRRLPLPEKRKTKLGLAYVDRSRCLPWKGQSDCIVCEEHCPTPSKAIVFKEE
                     RTLTTGGEWRMFKKPYIDEDLCVGCGICETKCPLTDRAAVLVTSRGETRSTGVLAR"
BASE COUNT          236 a          516 c          517 g          310 t
ORIGIN      
        1 ctcgcaatgg acgatcttcc tcctcttcgt gttcctgttc ctcaacacgg agtataagga
       61 caacgacgtc ctcccgtacg cggtcaacct gtttctccgg ctcgatcccc tgatggcggg
      121 ggccgccacc cttgcggggc gggcgctcat cggactggtc tggcccgcgc tggtcctcac
      181 gctgctcacc gtcctgctgg gccgcttctt ctgcggatgg ttctgcccgc tcggcgccgt
      241 gatcgacgcc acggatgcga cggtgttccg gaaagcccgg cggaaggacg cggtgcctgt
      301 atcctggagg aggtacaagt tcctcgtcct cttcttcctc gccgcctcct cgctgttcac
      361 gatgcaatgg gtcttcctct tcgatccgat cagcatcctc atccggacgt tcaccgtctc
      421 cgtcttcccc gcgctgaacc ttgtactcca ccggatcttc gacagtctct accgggcgcc
      481 cgggccgatc cccgcggttt cggaaccggt ctacgggttc ctcaaagctc acttcctcgc
      541 gttcgaacag ccggttttcc ggacctctgt gatcgtggga ttcctcttcc tcggcatcct
      601 cgccgcggaa aagtaccagc ggcggttctg gtgccggaac ctgtgtcctc tcggggcact
      661 gctggcgctc acgggacggt tcggactctt tcgccggcgg atcacggagg cggggtgcac
      721 ccgctgcggc ctttgcgaag cggactgccg catgggggcg atcggtggcg acgtcgccgt
      781 gaccgaccac ggcgagtgca tcgagtgcat ggattgccag gcgatctgtc ccacggaggt
      841 gatccgcttc tccggcaagg aggggcgcaa gtcggcggcc gtagatctca cccgccgggg
      901 tgttctcgcc gcggccgcgc tcggtgcggt cacggttccc ttcttccggg tggaggcgca
      961 cgggaaggcg cgggacccgt tgctgatccg gcccccaggc gcgttgccgg aaggggagtt
     1021 cctcgcccgc tgcacccggt gcggggaatg catgcgggtc tgcatcgcga acggcctgca
     1081 gccgacctgg ttcgaggcgg gcatcgaagg gatgtggagc ccgatcctcg tgccgcggat
     1141 cgggtattgc gaattcaact gcacgctctg cggacaggtc tgccctaccg gcgcgatccg
     1201 gcgccttccg ctcccggaga aaaggaagac gaagctgggc ctcgcctacg tcgaccggag
     1261 ccgttgcctc ccgtggaagg gacagtccga ctgcatcgtc tgcgaggagc attgcccgac
     1321 accaagcaag gcgatcgtct tcaaggaaga gaggacgctg acgacgggcg gcgagtggag
     1381 gatgttcaag aagccgtaca tcgacgagga tctctgcgtc gggtgcggga tctgcgagac
     1441 gaagtgtccg ctgaccgatc gcgccgccgt gctcgtcacc tcccggggag aaacccgttc
     1501 gacgggggtt ctcgcgagat gaaaacgcgg ttccgggtgt ggaaattggc tccatcggcg
     1561 agtatcatgc cccgatgac
//
LOCUS       DATGYW010000463         2316 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_347484, whole genome shotgun sequence.
ACCESSION   DATGYW010000463 DATGYW010000000
VERSION     DATGYW010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347484"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            72..440
                     /locus_tag="VK429_06415"
     CDS             72..440
                     /locus_tag="VK429_06415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011142262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HLN91478.1"
                     /translation="MPLSFLGFLAIGVVTGAVSGMFGIGGGIFVIPAMVWLYGFDQKM
                     ATGTSLGMLLPPIGIAAFWQYYRADLVNVPAALLLVAGFVAGSYFAAGYTIGLPQLLV
                     KRAFGGLMIVMGVIYILTAR"
     gene            467..543
                     /locus_tag="VK429_06420"
     tRNA            467..543
                     /locus_tag="VK429_06420"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:501..503,aa:Pro,seq:cgg)
     gene            complement(607..1368)
                     /locus_tag="VK429_06425"
     CDS             complement(607..1368)
                     /locus_tag="VK429_06425"
                     /inference="COORDINATES: protein motif:HMM:NF014325.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HLN91479.1"
                     /translation="MGDTSIRATSTGVLIVFLRQLRLPVLLFVAFIFLCVLAYSNLEG
                     ITWQDALFWIFHPHAIHYDKVRDATKFFSLMVYIGVFAFQIWVAERMLVTIFRKQGRE
                     AWKLMVNEANLEKVRDHFIICGYGQVGRTVVDQLDRMNIPFVLIETNEGLYHQLLKEG
                     IPVVHGDSKRHDTLQAAGIVRARGICIVIDNDADNLYITVTAKAMNPKLRIITRAGQQ
                     RYAQAMRNSGADEVIIPEYEGGLMVGRMIEKYSIV"
     gene            1528..>2316
                     /locus_tag="VK429_06430"
     CDS             1528..>2316
                     /locus_tag="VK429_06430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013704621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLN91480.1"
                     /translation="MKTEPRAGFTTIGTPAQGLTGATLGFFIGFAAVSLFGPTAKSLK
                     GIMDLSPLEVGFLVAAPSLSGSLLRIPFSAWVDTTGGKKPFLVLLLLSIIGMAGLFLT
                     LRSYYPARMTPSFYPLILMLGILCGCGIATFSVGIGQVAYWFPKARQGTALGTYAGIG
                     NLAPGIFTFLLPFALVTVGLTRCYLYWLVFLAAGAVVYAVIGRNAWYFQLMARGATAG
                     EARAESALHGQEIFPSGNLVNSLLLSARNWKTWALMAIYFTTFGG"
BASE COUNT          429 a          711 c          660 g          516 t
ORIGIN      
        1 acggaaacgt agcgggaaaa cagcacgtta ccgtatttat gcaacgcaac acctagaagg
       61 aggatctcct cttgcccctt tccttcctcg gcttcctggc gatcggcgtg gtgaccggcg
      121 ccgtgtccgg catgttcggg atcggcggcg gcatcttcgt catcccggcg atggtctggc
      181 tctacggatt cgaccagaag atggcgacgg ggacctccct ggggatgctc ctccccccga
      241 tcggcatcgc ggccttctgg caatattaca gggcggacct ggtgaacgtc ccggccgcac
      301 tcctgctggt cgcgggtttc gtcgccggtt cctacttcgc cgcggggtat acgatcgggt
      361 tgccgcagct cctcgtgaag cgggccttcg ggggactgat gatcgtgatg ggggtgatct
      421 acatattgac ggcgcggtag gccgttgcta ccatcactct ttccatcggg atgtggctca
      481 gcctggtaga gcacctggtt cgggaccagg gggtcgctgg ttcaaatcca gtcatcccga
      541 ccatgatttc aaaaggttac gacatcccgg gtcgtaacct ttttcatttt gcgatgatga
      601 tgattcctaa acgatggaat atttctcgat cattcttccc accatcaagc ccccctcgta
      661 ctcggggatg atcacctcat ccgcaccgga attccgcatg gcctgggcgt accgctgctg
      721 gccggcccgg gtgatgatcc tcaatttcgg gttcatcgct ttggcagtca cggtgatgta
      781 gaggttgtcc gcatcgttgt cgatcacgat gcagatcccc cgcgctctca caatccccgc
      841 tgcctgcaac gtgtcgtgtc gcttcgagtc tccatggacg accgggatac cttccttgag
      901 cagctggtgg tacagccctt cgttcgtttc gatgaggaca aaggggatgt tcatgcggtc
      961 gagttgatca acgacggttc tgcccacctg accgtaaccg caaatgatga aatggtcccg
     1021 gaccttttcg aggttcgcct cgttgaccat cagtttccac gcctcccttc cctgctttcg
     1081 gaaaatggtg acgagcatcc gctccgcgac ccagatctga aaggcgaaca ccccgatata
     1141 gaccatcagg gagaagaact tcgtggcgtc ccttaccttg tcgtaatgga tcgcatgggg
     1201 atggaagatc cagaacaggg cgtcctgcca cgtgatccct tccaggttcg agtaggccag
     1261 cacgcagagg aagatgaagg caacaaacag caggacaggc agccgcaact gccggaggaa
     1321 gacgatcagg acgccggtcg atgtcgctcg aatcgacgta tcccccatgt tgcattgcat
     1381 ggagccgagg atttttcgcc ggtttgttac ccctatatcg atactataac aaatccacca
     1441 ggacagatcc ggccgcatcc cgaaaaacat gcgattccgg tagaatcctg attggcctct
     1501 ggaataattt cgggagggaa ggccaaaatg aaaacggaac cgcgcgcagg cttcacaacg
     1561 atcggaacgc cggcccaggg actgaccgga gccacccttg ggttcttcat cggttttgcc
     1621 gcggtctcac tcttcggtcc aaccgcgaag agcctcaaag ggatcatgga cctcagcccc
     1681 ctcgaggtcg gtttcctcgt ggccgcccca tccctttctg gatccctgct ccggatcccc
     1741 ttctccgcct gggtcgatac caccggtggg aagaagccct tcctggtcct cctcctcctc
     1801 tccatcatcg gcatggccgg gctttttctg accctccgct cctattatcc agcccggatg
     1861 accccctcgt tctacccgct gatcctgatg ctcgggatat tgtgcgggtg cgggatcgcc
     1921 acgttttccg tcggtatcgg ccaggtggcg tactggtttc caaaggcccg gcaggggacg
     1981 gcgctgggta cctacgccgg gatcgggaac ctcgcccccg gaatcttcac attcctcctg
     2041 cccttcgccc tggtgaccgt ggggcttacc cggtgctatc tgtattggct cgtattcctc
     2101 gcagcggggg ccgtcgtgta cgcggtcatc ggccggaacg cctggtactt ccagttgatg
     2161 gcacggggag cgacggcggg cgaggcgagg gcggaatcag cgctccacgg ccaggaaatc
     2221 ttcccgtccg gcaaccttgt gaacagcctt cttctctcgg cgaggaactg gaaaacgtgg
     2281 gcgctcatgg caatctactt cacgaccttc ggcggg
//
LOCUS       DATGYW010000464         1580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_83446, whole genome shotgun sequence.
ACCESSION   DATGYW010000464 DATGYW010000000
VERSION     DATGYW010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83446"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..927)
                     /locus_tag="VK429_06435"
     CDS             complement(85..927)
                     /locus_tag="VK429_06435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HLN91481.1"
                     /translation="MAFSGRKSAGVGPAKDPAEGKRPIPGVRNVVAVASGKGGVGKST
                     ISANLAVALARTGARVGLLDADIYGPSVPTLFHLKGHRLAGEDGMIVPAEAEGLKIVS
                     IGFLLEDDSPVIWRGPMLMKALEQFLHGTKWGELDYLVIDLPPGTGDVQISLVQMTPV
                     AGAVVVTTPQDLALIDVKKAVRMFEKVGVPILGVVENMSYFLCPHCGGRSEIFGHGGA
                     RKACGEMGLRFLGEVPLEMALRAASDAGELLVATAPDAPAARAIAKAAADSAAALAVL
                     DTLR"
     gene            1051..>1580
                     /locus_tag="VK429_06440"
     CDS             1051..>1580
                     /locus_tag="VK429_06440"
                     /inference="COORDINATES: protein motif:HMM:NF015013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HLN91482.1"
                     /translation="MTDRPGRQMGRAAALMMGSVLLSRILGYARDAVIAWQHGATIET
                     DAYFVAFTIPDFLNYLLAGGSLSITFIPIFARYMAEGKEEEGFRSFSAIATVMGVGML
                     FFIVLGEFLAGRVIPLLAPGFPPAQAALAARLTRIVLPAQIFFYIGGLLMAMQYARKQ
                     FFLPALAPLIYNAGIIA"
BASE COUNT          228 a          587 c          487 g          278 t
ORIGIN      
        1 tggaatgaga ggggcactcc gaatttcatg agtgtccctc ttttgttgga gttctaggaa
       61 cgtcccggtt ctggggatct gttgtcagcg cagggtgtcg aggacagcga gggcggcggc
      121 ggaatccgcc gccgccttcg cgatcgcccg cgccgcgggc gcgtccgggg cggtcgccac
      181 cagcagttcc cccgcgtccg aagccgcccg cagcgccatc tcgagcggga cctccccgag
      241 gaaccgcagc cccatctccc cgcacgcctt ccgcgcgccg ccgtgcccga aaatctcgct
      301 gcgtcccccg cagtgcgggc acaggaagta gctcatgttc tcgaccacgc cgaggatggg
      361 gacgccgacc ttctcgaaca tccgcaccgc cttcttcacg tcgatcagcg ccaggtcctg
      421 cggcgtcgtg accaccacgg ccccggccac cggcgtcatc tggacgaggg agatctggac
      481 gtccccggtt cccggcggca ggtcgatgac gaggtagtcg agctcccccc acttcgtccc
      541 gtggaggaac tgctccagcg ccttcatcag catcgggccg cgccagatga ccgggctgtc
      601 gtcctcgagg aggaatccga tcgaaacgat cttcagcccc tccgcctcgg ccggcacgat
      661 catcccgtcc tcgcccgcga gccggtgccc cttgaggtga aacagggtcg gcacggaggg
      721 accgtagatg tcggcgtcga gcagcccgac gcgggccccg gttcgcgcca gcgccaccgc
      781 gaggttcgcg ctgatcgtcg acttccccac gccccccttc cccgacgcga cggcgacgac
      841 gttgcgcacg cccgggatcg gccgcttccc ctccgccgga tccttcgccg gcccgacgcc
      901 ggcggacttc cttcctgaaa acgccatgtc gctcacctcg cgcgttgatg caccggatga
      961 tagcagggcg gacgcatctt ccgcttgacc gtcgtcaagg ggacgatttt gcggtggagc
     1021 cctccactcc cttcgattat agtttcaagg atgaccgacc gcccgggccg acagatgggg
     1081 cgcgccgcgg cgctgatgat ggggtcggtg ctcctctccc ggatcctcgg gtacgcccgc
     1141 gacgccgtga tcgcctggca gcacggcgcc accatcgaaa cggacgccta cttcgtcgcg
     1201 ttcacgatcc ccgacttcct caactacctg ctggcgggcg gctcgctctc catcaccttc
     1261 atcccgatct tcgcgcggta catggcggag gggaaggagg aggagggatt tcgctccttc
     1321 tccgcgatcg ccacggtgat gggggtcggc atgctcttct tcatcgtgct gggcgagttc
     1381 ctcgcgggcc gcgtcatccc cctcctcgcc cccggttttc cgcccgcgca ggcggccctc
     1441 gcggcgcgac tgacgcgcat cgtactcccc gcgcagatct tcttctacat cggagggctc
     1501 ctgatggcga tgcagtacgc ccggaagcag ttcttcctcc ccgcgctggc ccccctgatc
     1561 tacaacgccg ggatcatcgc
//
LOCUS       DATGYW010000465         1531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_35344, whole genome shotgun sequence.
ACCESSION   DATGYW010000465 DATGYW010000000
VERSION     DATGYW010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35344"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1295
                     /locus_tag="VK429_06445"
     CDS             <1..1295
                     /locus_tag="VK429_06445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019122977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HLN91483.1"
                     /translation="PMDPLVPFLLFGSFGALLFLNFPIAAALGISSVLVIAVFDLAPL
                     ELIPQQLLSATDSWTLLAVPFFILAGNILGKTAISERLIRLSRVVVGQFPAGLAMVAV
                     IVSIFFAGISGSGPADTAALGAILIPGMVAAGYDRRSAAALMAAGGGIGIIIPPSIAL
                     VIYGVVANASISKLFIAGILPGILVGLSLFVVSYLLFGKDPNIRPEKRGSLREIGAAF
                     KDAAWGLLAPIIILGGIYGGIFTATEAATVAVVYGVIVGFFIHRDLKLSDLPEILIDT
                     GVTTGVVMLLVCTASVFAWVLNTSGVAAAAASGLMRLASGKFVGLLLINGVLLIAGCF
                     MDAISIFYILLPILLPVVNALGIDLVHFGIVMTVNMAIGQITPPVGVNLFVACGIARI
                     SMKEISRAVLPMVAAQTAALLVISFWPDLSLFLTRFMR"
BASE COUNT          210 a          530 c          487 g          304 t
ORIGIN      
        1 gaccgatgga tccactcgtc cctttcctcc tgttcggctc cttcggggcc ctcctgttcc
       61 tcaacttccc cattgcggcg gcgctgggga tctcgagcgt cctcgtgatc gccgtcttcg
      121 acctcgcgcc gctggagctc atcccgcagc agctcctgag cgcgaccgac tcgtggaccc
      181 tcctcgcggt gccgttcttt atcctcgccg ggaacatcct cgggaaaacg gcgatctcgg
      241 aacggctgat ccggctttcg cgggtagtgg tcggccagtt ccccgccggg ctggcaatgg
      301 tcgcggtgat cgtctccatc ttcttcgccg gcatctccgg ctccggcccc gccgacacgg
      361 cggcgctagg ggcgatcctc atcccgggga tggtggcggc gggatacgac cggcgctccg
      421 cggcggccct catggcggcc gggggaggca tcggcatcat catcccgccg tcgatcgcgc
      481 tcgtgatcta cggtgtggtg gcgaacgcct ctatctcgaa gctgttcatc gccgggatcc
      541 tgccggggat cctggtcggc ctctccctgt tcgtcgtctc gtaccttctc ttcgggaagg
      601 acccgaatat ccggccggaa aagcgggggt cccttcggga gatcggcgct gcgttcaagg
      661 acgccgcgtg gggtctgctc gcccccatca ttatcctcgg cggcatctac gggggcatct
      721 tcaccgccac ggaggcggcc accgtcgcgg tcgtctacgg cgtgatcgtc gggttcttca
      781 tccaccggga cctgaagctc tccgacctgc cggagatcct gatcgacacc ggggtcacca
      841 cgggggtggt gatgctgctc gtgtgcaccg cctcggtctt cgcctgggtg ctcaacacct
      901 cgggcgtcgc cgccgcggcc gcttcggggc tgatgcgcct ggcctccggg aagttcgtcg
      961 ggctgctgct gatcaacggt gtccttctga tcgcgggctg cttcatggac gccatctcga
     1021 tcttctacat cctgcttccg atccttctgc ccgtggtcaa cgccctcggg atcgacctcg
     1081 tccacttcgg gatcgtgatg acggtgaaca tggcgatcgg ccagatcacg cctccggtcg
     1141 gggtcaacct cttcgtcgcc tgcgggatcg cccgcatatc gatgaaggag atctcccggg
     1201 ccgtcctccc gatggtggcc gcgcagaccg cggcgctcct cgtcatcagt ttctggcccg
     1261 acctctcgct cttcctcacc cggttcatgc ggtagcgcac cgggaggatc cggcgcagcc
     1321 gaagggggag ggaggcgccc cactcccgga cgaactacac tccctggggt accctcaccg
     1381 taggaataat gaaggccggt gcgcagccgt gcaggttcac cgtacggcga accacgaacg
     1441 gagccccgcc ctccgaggcg acggagccgg aaggggaatc ccgggggtac agcgccttca
     1501 gggatcgata taattgatcg cagggggata c
//
LOCUS       DATGYW010000466         1831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_136766, whole genome shotgun sequence.
ACCESSION   DATGYW010000466 DATGYW010000000
VERSION     DATGYW010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_136766"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VK429_06450"
     CDS             complement(<1..228)
                     /locus_tag="VK429_06450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HLN91484.1"
                     /translation="MDEKPGAAIPRDLPFADASGRQVRLGDYLGDGPVLLTLNYYTCP
                     MLCPLTFRNLAATMEQVKGLSLERDYRVVTVS"
     gene            complement(348..1751)
                     /locus_tag="VK429_06455"
     CDS             complement(348..1751)
                     /locus_tag="VK429_06455"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011286757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLN91485.1"
                     /translation="MSVTLTFLGGAREVTGSCILVQTARNRFLVDCGMFQGGGESDRK
                     NARRMPVPPGSIDFVLSSHAHIDHSGLLPKLVRDGFRGPIHCTPATADLLGVMLPDAG
                     HIQEKEAEWQTRKRERGGMGEVPPLYTEADALAVLPALRPVPYGKSFPPGPGVSAAFL
                     DAGHILGSAIVTVTVADEGKEKKLVFSGDLGHRGLPIVRDPTPVLRADALVIESTYGN
                     RLHKGMEDTVEEFVRAVDDTLHRKKGNVVIPSFAVGRAQDILYLLTDLTRKGRLSGIT
                     LYIDSPLATEATRITMRHPECYDEETREVFAWRDAHPDALEVVLVRNTEESRELNSLR
                     GGAILMAGSGMCDAGRIKHHLKHNLWRKECSVIIVGFQAQGTLGRKIVDGAKRVRIFG
                     EEIAVAADVYTIGGLSAHADRDDLLAWAGQFQAPPGNVFVAHGEESVSLEFAGTLKEK
                     LGWPAQVPSPGQPLVLR"
BASE COUNT          297 a          613 c          627 g          294 t
ORIGIN      
        1 gcttaccgtg acaacgcggt aatccctctc aagggaaagc cctttcactt gctccatcgt
       61 tgcggcgagg tttcggaacg tcagaggaca gagcatcgga catgtgtagt aattgagggt
      121 gaggaggacc gggccgtcgc cgagatagtc ccccagtcgg acctgcctcc cggacgcatc
      181 ggcgaacgga aggtcgcgcg gaatggccgc gccgggcttc tcgtccactc cgacctcctg
      241 caggatggca tcctgcgggt cggccgcatg gacaaccccg ggaaggaaca gcaggaaagc
      301 gaacgacacg gcggcgagac gccttctccg aaccggccgg gacccgttca tcggaggacg
      361 aggggctggc cgggagaggg gacctgcgcg ggccacccga gcttctcttt cagcgtcccg
      421 gcgaattcga gggagacgga ctcctcgccg tgggcgacga agacgttccc ggggggagcc
      481 tggaactgcc ccgcccacgc gaggaggtcg tcccggtcgg cgtgcgccga cagaccgccg
      541 atcgtgtaca cgtccgcggc cacggcgatc tcctcgccga agatcctcac ccgtttggcg
      601 ccgtcgacga ttttccggcc gagggtcccc tgggcctgaa acccgacgat gatgacgctg
      661 cactccttcc gccagaggtt gtgcttcagg tggtgcttga tccttcccgc gtcgcacatc
      721 ccgctccccg ccatcaggat cgcccccccg cgcagggagt tcagctcgcg ggactcctcc
      781 gtgttcctga ccaggacgac ctccagcgcg tcggggtgag cgtcccgcca ggcgaagacc
      841 tcccgcgtct cctcgtcgta gcactcgggg tggcgcatgg tgatccgcgt ggcctcggtg
      901 gccagcgggg agtcgatgta caacgtgatc cccgacaggc gcccttttcg cgtcaggtcg
      961 gtgaggaggt acaggatgtc ctgcgcccgc cccacggcga acgacgggat gacgacgttc
     1021 cccttcttcc tgtggagcgt gtcgtcgacg gcgcgtacga actcctccac cgtgtcttcc
     1081 atccccttgt ggagccggtt gccgtaggtc gattcgatga cgagggcgtc ggcccgcagg
     1141 acgggggtcg ggtcgcgcac gatcggcaac ccccggtgcc cgagatcccc ggagaagacg
     1201 agtttcttct ccttcccctc gtcggcgacg gtcacggtga cgatcgccga tcccaggata
     1261 tgcccggcgt cgaggaaggc ggcggagacc cccggcccgg gggggaacga tttcccgtaa
     1321 ggaacggggc gcagcgcggg gaggacggcc agcgcgtcgg cctcggtgta gagcggcgga
     1381 acctccccca tccctccacg ctcccttttc cgggtctgcc actccgcttc cttctcctgg
     1441 atgtgcccgg cgtcgggaag catcacgccg aggaggtcgg cggtggcggg ggtgcagtgg
     1501 atggggcctc gaaaaccgtc ccgcacgagt ttcggcagca ggccggagtg gtcgatgtgg
     1561 gcgtgggagg agaggacgaa gtcgatcgac ccgggaggga ccggcatccg gcgggcgttc
     1621 ttccggtcgc tctcccctcc cccctggaac atcccgcaat cgacgaggaa ccggttgcgc
     1681 gccgtctgca cgaggatgca ggagccggtg acctcccgcg ccccgcccag gaacgtcaag
     1741 gtgacgctca ttgcaccacc ctcgtgagga tccaggagac gacggagagg aggatggatc
     1801 cggccaccgc cccgaggaag ccgttgacat g
//
LOCUS       DATGYW010000467         1622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_347604, whole genome shotgun sequence.
ACCESSION   DATGYW010000467 DATGYW010000000
VERSION     DATGYW010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347604"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1622)
                     /locus_tag="VK429_06460"
     CDS             complement(<1..>1622)
                     /locus_tag="VK429_06460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91486.1"
                     /translation="ASIGLAFYNDSDSEGASIDPQIDGSNLPISAYRNRIDTPSRFNG
                     LTVGQPLGEALWTIVGQYAKDSTSTADGPRYHNGDYNPTKDPYSFHGGPSRCVKGSVI
                     IISDGEPCNDGNLPTSYAGFDILNYADKTSINCQQDNCLAAPDFSATTIPACGTGGNV
                     GGLEDVALFAHTTDLRSETFGGSPPIENKQNLDIYVIRAFGTDNSNLLKYAAINGSFD
                     DKNGNGVPDPGEYSTPGTNGSAYFPADDGSAIEQALRDIFVNILKRATSGTAASVLAS
                     GEGSGANLVQAVFYPRRRFFDEVVEWTGTLTNLWYYVDPFFGNASIREDSDKSTDESD
                     PRVLNLFTDNTLEFFFDQASQTTKANEFANSSTTGNKTGTPAVIPFEEVHSIWEAGAF
                     LHSSSASSRSIFTAIDTAVPRTKLFFNDNNATTVSALASWLNAASVAEATDIMRYVRG
                     KDDVNGDGVIDYRQRTVPFPAISSLDNTTWKLGDIINSTLKIASRIPLNTYDRTYGDM
                     TYRDFTRSSDYLKRGMVFVGANDGMLHAFKLG"
BASE COUNT          269 a          468 c          536 g          349 t
ORIGIN      
        1 tcccagcttg aaggcgtgga gcatcccgtc gttggcgccg acgaacacca tcccccgctt
       61 cagatagtcg gaggaacggg tgaaatcccg gtaggtcatg tcgccgtacg ttcgatcata
      121 cgtgttgaga gggatgcggg atgcgatctt cagggtcgag ttgatgatgt ccccaagctt
      181 ccaggtcgta ttgtctaaac tcgaaatggc ggggaacgga acggtccgtt gccggtagtc
      241 gatcacgccg tcgccgttga cgtcatcctt cccgcggacg taccgcatga tgtcggtggc
      301 ctcggcgacg ctggccgcgt tcagccagct cgccagtgcg gaaaccgtgg tggcgttatt
      361 atcgttgaag aacagtttcg tccgtggaac cgcggtgtcg atcgcggtga agatcgatcg
      421 cgaggacgcg ctgcttgagt ggaggaacgc cccggcctcc cagatcgaat ggacctcctc
      481 gaacgggatc acagcaggag ttcccgtctt gttgccggtg gtggagctgt ttgcgaattc
      541 gttcgccttg gtggtctggc tcgcctggtc gaagaagaat tcgagcgtgt tgtcggtgaa
      601 caggttcagc actcgaggat cgctctcgtc tgtggatttg tccgaatctt cccggatcga
      661 ggcgttgccg aagaacgggt ccacgtagta ccagaggttc gtgagcgtac cagtccactc
      721 gacgacctcg tcgaagaacc tgcggcgggg atagaacacc gcctggacga ggttcgctcc
      781 gctaccctcc cccgacgcca ggaccgaagc cgcggtgccc gatgtggccc tcttgaggat
      841 gttcacgaag atgtcccgca gcgcctgctc gatggcgctc ccgtcgtcgg ccgggaaata
      901 cgcactcccg ttcgtccccg gcgtcgagta ctccccgggg tcgggcactc cgttcccgtt
      961 cttgtcgtcg aaggagccgt tgatggcggc gtatttcagc aggttggagt tgtcggtccc
     1021 gaaggcccgg atgacgtaga tgtcgaggtt ctgtttgttt tcaatcggag ggcttcctcc
     1081 aaacgtctcg ctccgcaggt ccgtggtgtg ggcgaagagc gcgacgtcct cgaggcctcc
     1141 tacgttcccc ccggtaccgc aggccgggat ggtggtggcg gaaaaatcgg gcgccgccag
     1201 gcagttgtcc tgctggcagt tgatcgacgt cttgtcggcg tagttgagaa tgtcgaaccc
     1261 ggcgtagctg gtcgggaggt ttccgtcgtt gcatggctcc ccgtccgaga tgatgatgac
     1321 gctccccttg acgcatcggg aggggccgcc gtggaaggag tacggatcct tggtcggatt
     1381 gtaatccccg ttgtggtatc gggggccgtc ggcggttgag gtactatcct tggcatactg
     1441 cccgacgatg gtccacaggg cctcccccag gggctgcccc accgtcaacc cgttgaaccg
     1501 cgacggggtg tcgatacggt tccggtacgc cgagatcggg aggttgctcc cgtcgatctg
     1561 cggatcgatg gaagcgccct cgctgtcgct gtcgttgtaa aaggcaagcc cgatggatgc
     1621 cc
//
LOCUS       DATGYW010000468         2265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_417355, whole genome shotgun sequence.
ACCESSION   DATGYW010000468 DATGYW010000000
VERSION     DATGYW010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417355"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1068
                     /gene="pilM"
                     /locus_tag="VK429_06465"
     CDS             <1..1068
                     /gene="pilM"
                     /locus_tag="VK429_06465"
                     /inference="COORDINATES: protein motif:HMM:TIGR01175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus assembly protein PilM"
                     /protein_id="HLN91487.1"
                     /translation="ASMGLFGSKDLVGLDIGSSSVKMAHVKAVGAENRLRKFGVFPLP
                     PDAIVDGAIMDHGAVVEGIKTALRELKIHEKEVAISLSGHSVIIKKVQLPTTTAEELE
                     ESIQWEVEQYIPFDIKDVKIDFQVIGPLRDDPSRMDVLLVAAKTDLINDYISVVRDAG
                     LVPRIVDIDSLAAGNAFELTHPVSDDQVPMIVNVGASFMNINILHAGVPLFTRDVPMG
                     GGMYTTEIQKQIAVSFETAEEYKAGRKDPGERSEKVTEIMKVVSNLLATEAQRSCNFF
                     SATYPDRLVTKVYLTGGASRSKFLKEMLAEKIGVDVEIFDPFEGLVVDEKAVDPSGIA
                     QLNTSATVSVGLALRNLEARG"
     gene            1065..1598
                     /locus_tag="VK429_06470"
     CDS             1065..1598
                     /locus_tag="VK429_06470"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HLN91488.1"
                     /translation="MIRINLVRGKRKKRRELSVGSAWIALPLVILAGTIYFHTTVSGK
                     ISRLDADIVKANADIERLKKEIGEVEKFKARKAELQKKVDIISNLQKGRTGPVRHLEA
                     LSAAIPEKCWIDSLGVKDGKVTLSGVALNNYTIANFMTALGQTGRFRDVVLGAAEQAT
                     VAGVKLVKFNLTFQAVN"
     gene            1627..2244
                     /locus_tag="VK429_06475"
     CDS             1627..2244
                     /locus_tag="VK429_06475"
                     /inference="COORDINATES: protein motif:HMM:NF016253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HLN91489.1"
                     /translation="MALKLGDLSKVPPRQKVLLAVLFCGLVVAGYYYLYYREASQRIG
                     AMETQLAGLQSKIREQQAIAGNLRSFQEEVKRLETQLSFLLEQLPNSAEIPSLLKSVS
                     DLGKESGLDFLRFAPSGEIKKDFYAEIPVSISVNGDYHSFALFTDKVAHYPRIVNLSN
                     IAFSSPKPSGDNLVLVTVNCTATTYRFLEQQAAPAPGAGGQGKKK"
BASE COUNT          462 a          694 c          714 g          395 t
ORIGIN      
        1 gcgtcgatgg ggctgttcgg cagcaaagat cttgttgggc tggacatcgg ttcgagttcc
       61 gtcaagatgg cccacgtcaa ggcggtgggc gccgagaacc ggctgaggaa gttcggggtc
      121 ttcccccttc cgcccgacgc gatcgtcgac ggggcgatca tggaccacgg cgccgtcgtc
      181 gaggggatca agaccgccct gcgggagttg aagatccacg agaaggaggt cgccatctcc
      241 ctctccgggc actccgtcat catcaagaag gtgcagctgc ccacgacgac cgccgaggag
      301 ctcgaggagt cgatccagtg ggaggtggag cagtacatcc ccttcgacat caaggacgtc
      361 aagatcgact tccaggtgat cggtccgctg agggacgacc cctccaggat ggacgtcctc
      421 ctggtggcgg cgaaaaccga cctgatcaac gattacatct ccgtcgtgag ggatgccggc
      481 ctcgtccccc ggatcgtcga catcgactcg ctggccgcgg ggaacgcctt cgagctcact
      541 catccggttt ccgacgacca ggtgccgatg atcgtcaacg tcggagcgtc gttcatgaac
      601 atcaacatcc tgcacgcggg agtccccctc ttcacgcggg acgtcccgat gggcgggggg
      661 atgtacacca ccgaaatcca gaagcagatc gccgtcagct tcgagacggc ggaagagtac
      721 aaggcgggaa ggaaggatcc cggggagcgc tcggagaagg tcaccgagat catgaaggtc
      781 gtttccaacc ttctcgccac cgaggcgcag aggtcctgca acttcttctc cgcgacgtac
      841 cccgaccgcc tggtgacaaa ggtgtacctg accggcgggg cgtccagatc caagttcctg
      901 aaggagatgc tggcggaaaa gatcggggtc gacgtggaga tcttcgatcc gttcgagggc
      961 ctggtggtgg acgaaaaagc cgtcgacccg tccgggattg cccaactcaa cacctccgca
     1021 acggtgtcgg tcggccttgc gctgcggaac ctggaggctc gcggatgatc cggatcaacc
     1081 tggtccgtgg gaagcggaag aagcgcaggg agctgagcgt cgggtccgcc tggattgcgt
     1141 tgccgctggt gatcctggca gggacgatct acttccacac cacggtctcg ggaaagatct
     1201 cgagactcga cgcggacatc gtgaaggcca acgccgacat cgagcgcctt aaaaaagaga
     1261 tcggcgaggt cgaaaagttc aaggcccgga aggcggagct ccagaaaaag gtggacatca
     1321 tctccaacct gcagaagggg cgcaccggcc ccgtccgcca cttggaggcg ctctcggccg
     1381 cgatcccaga gaaatgctgg atcgactcgc tgggggtgaa ggatggaaaa gtcacccttt
     1441 ccggcgtcgc cttgaacaac tacacgatcg cgaacttcat gaccgctctc gggcagaccg
     1501 gccgcttccg cgatgtcgta ttgggagccg ccgagcaggc gacggtggcg ggcgtgaaac
     1561 tcgtgaagtt caacttgacg ttccaggcgg tcaactgaac gccccatccc cgggagaaga
     1621 tacggaatgg cgctaaaact tggcgatctt tcgaaggtgc cgccccggca aaaggttctg
     1681 cttgccgtcc tgttctgcgg cctcgtcgtc gcggggtact actatctgta ttatcgggag
     1741 gcgtcccagc ggatcggcgc gatggagacc cagttggcgg gtcttcagag caagatccgg
     1801 gagcagcagg cgatcgccgg gaacctgcgt tccttccagg aagaggtcaa gcggctcgag
     1861 acgcagctgt cgttcctgct cgagcagctt ccgaattcgg cggagatccc ctccctgttg
     1921 aaaagcgttt cggacctcgg gaaggaatcg gggcttgact tccttcgttt cgccccctcc
     1981 ggcgagatca agaaggattt ctacgccgag atccccgtgt cgatctccgt caacggcgac
     2041 tatcacagct tcgccctctt caccgacaag gtggcgcact acccccggat cgtgaacctg
     2101 tccaacatcg ccttttcctc cccaaaaccg tccggagaca acctcgtcct ggtgaccgtc
     2161 aactgcacgg cgacgaccta ccgcttcctc gagcagcagg cagcacccgc tcccggggcg
     2221 gggggccagg ggaagaaaaa atgaggccct ctcccgggcg gcacc
//
LOCUS       DATGYW010000469         2092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_417438, whole genome shotgun sequence.
ACCESSION   DATGYW010000469 DATGYW010000000
VERSION     DATGYW010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2092
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417438"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..843
                     /locus_tag="VK429_06480"
     CDS             124..843
                     /locus_tag="VK429_06480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015722164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HLN91490.1"
                     /translation="MKPRKILLLLVFAAVVAAFYFLDLGKYVTLESLKANRALLTDLR
                     MAHAVLFAGIFVLVYIVQTAFSLPGAAILSLAAGAIFGVLQGTLFVVSGATVGAIFAF
                     LVSRTLLRDWVVKKFGGRMEGIDRGLRENGLSYLLFLRLVPAFPFFLVNLACGVTGLP
                     LRTYALGTLFGILPGSLVFVNAGASLAAIETVRQVASPRVLGSFALLGLFALLPAIID
                     AAKKRREKDVLPVDRGGTGKG"
     gene            1214..1567
                     /locus_tag="VK429_06485"
                     /pseudo
     CDS             1214..1567
                     /locus_tag="VK429_06485"
                     /inference="COORDINATES: protein motif:HMM:NF013766.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase"
     gene            1616..1825
                     /locus_tag="VK429_06490"
     CDS             1616..1825
                     /locus_tag="VK429_06490"
                     /inference="COORDINATES: protein motif:HMM:NF045255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91491.1"
                     /translation="MYPYFTDFLASTAVTRVNGYVAGYGTCESLRGELDGLKLSAAGR
                     KRLEGIVCSHDATKGRSSGAACPAG"
     gene            1902..>2092
                     /locus_tag="VK429_06495"
     CDS             1902..>2092
                     /locus_tag="VK429_06495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003496195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HLN91492.1"
                     /translation="METYYDPEDLAAFGGIGKDAPELAKKFFDYYDEVFKEGELTERE
                     KALIALAVAHAVQCPYCIDA"
BASE COUNT          362 a          619 c          731 g          380 t
ORIGIN      
        1 ctcgaagaag gccgccgggt cgtactactc cgggaaactg ttttccgtcc ggacgaagaa
       61 gatcctgcgt ttcctcttcg acctgaaggg gagggcgtgc acgccggaag aagaggtgtc
      121 cggatgaaac cccggaagat cctgctcctc ctcgtattcg cggcggtcgt ggcggcgttc
      181 tacttccttg acctggggaa gtacgtgacg ctggaaagcc tgaaggcgaa tcgggcgctc
      241 cttacggatc tgcgcatggc gcatgctgtc ctgttcgccg ggatcttcgt gctggtctac
      301 atcgtccaga cggccttctc cctccccggg gcggccatcc tctccctcgc cgcgggggcg
      361 atcttcgggg tcctacaggg gacgctgttc gttgtctcgg gtgccaccgt cggcgccatc
      421 ttcgctttcc tggtcagccg gacgctgctt cgggactggg tcgtgaagaa attcggcggg
      481 cggatggagg ggatcgaccg ggggctgcgg gagaacggcc tctcctacct cctcttcctg
      541 cggctggtcc cggcgttccc gttcttcctg gtcaacctgg cgtgcggcgt cacgggactg
      601 ccgcttcgga cctacgccct gggcacgctg ttcgggatcc tgccggggag cctggtcttc
      661 gtgaacgcgg gggcgagcct cgccgctatc gaaaccgtgc gccaggtcgc atccccccgg
      721 gtgctgggat cgttcgccct gctgggactg ttcgccctcc tccccgcgat catcgatgcc
      781 gcaaagaagc gccgggagaa ggatgtcctc ccggtcgatc ggggggggac gggaaaggga
      841 taaactggta gcacacccgg cacggggcgg aaggattccg taaatgatgc gaccgatgtg
      901 caagtggaac cggtcgggga accgcgaaat gaggggaggg tcaccggtga agaggacgac
      961 gcgttctttc tggcgcggca caaggccact ccttttcgga acgatcgctt cggggatcgt
     1021 cgcggcgtac ttcctggcgc cggttccggg aagaggcacg gtgtttttcc aaccgggacc
     1081 ggaggggacg gcgatgacaa ggaagtcggg ggacgggacg gtgcgtcgat ccgcggaggt
     1141 acctccgatc gatgcatccc tgcccggagt gacggagaca gcgaccttcg ccttgggctg
     1201 attctggggt ccggactccc ggttcgggag tcttcccgga gtcctccgca cccgcgtcgg
     1261 gtacacgggg ggatcgacgg agaaccccac gtatcacaac ctcggggacc acatcgaggc
     1321 ggtcgaggtg atcttcgatc cgtccgtgat cacctacggg gaattgctcg atgtcttctg
     1381 ggcgagccat gatccgcggg aacgtccctg gaagcggcaa tacatgtccg cgatctttac
     1441 ccgcggcgac gaacagaaaa accttgcgat ccgggcgagg agcagcgagg ccgcccggaa
     1501 aaacgggaag atctatacgg aggtcctgca ggcttccagg ttctacccgg ccgaggcgta
     1561 tcaccagaag ttcgcgctcc gggggaggcc ggacctcctg aaggagtacg aggcgatgta
     1621 cccgtatttc acggatttcc tcgcctccac cgccgttacc cgggtcaacg ggtacgtggc
     1681 tggctacggg acgtgcgagt cccttcgggg ggagctcgac gggctcaaat tgtccgccgc
     1741 gggaaggaag cgtctggaag gtatcgtgtg ttcgcacgat gcaacgaaag ggagaagctc
     1801 cggggcggcg tgtccagcgg gctgatctcc gcgcgagaat ggcataatgt caggtacccg
     1861 gcggcgtccg cgggccagct tacgggaacg ggaggtcagg aatggagacg tactatgacc
     1921 cggaggatct cgcagcgttc ggcgggatcg ggaaggacgc gccggagctg gcgaagaagt
     1981 tcttcgacta ctacgacgaa gtcttcaagg agggggagct cacggagcgg gagaaggcgc
     2041 tgatcgccct cgcggtggcg cacgcggtcc agtgccccta ctgcatcgac gc
//
LOCUS       DATGYW010000470         2140 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_347766, whole genome shotgun sequence.
ACCESSION   DATGYW010000470 DATGYW010000000
VERSION     DATGYW010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2140
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347766"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..304)
                     /locus_tag="VK429_06500"
     CDS             complement(<1..304)
                     /locus_tag="VK429_06500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012099185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase II"
                     /protein_id="HLN91493.1"
                     /translation="MREKPVTPERAREHGLSDAEYGTVLGILGRTPSLTELGIFSVMW
                     SEHCSYKSSRIHLRKFPTKGPRVLQGPGENAGIVDIGDGLAVVFKMESHNHPSFIEP"
     gene            complement(301..1002)
                     /gene="purQ"
                     /locus_tag="VK429_06505"
     CDS             complement(301..1002)
                     /gene="purQ"
                     /locus_tag="VK429_06505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013781245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HLN91494.1"
                     /translation="MKTAVLVFPGSNCDHDAYHALKHVVGVDAEFVWHKRSSLGGFDA
                     VVIPGGFTYGDYLRSGAMAKLSPVMGAVRRFAEDGGPVIGICNGFQILLESGLLPGAM
                     IVNDSLRFVCDYVHLRAGTDRTPFTRGIPEGSILKMPVAHYQGNYYADGRTLSSLEER
                     GQVVFRYCDPDGNVTAESNPNGSARNIAGICNEGGNVLGMMPHPERSAEEVLGSADGR
                     RLFDAMVAWLEEKPA"
     gene            complement(1013..1255)
                     /gene="purS"
                     /locus_tag="VK429_06510"
     CDS             complement(1013..1255)
                     /gene="purS"
                     /locus_tag="VK429_06510"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HLN91495.1"
                     /translation="MKAKIYVTLKRGVLDPQGKAIRASLSHLGIDGVEDVRVGKFMEI
                     TLKEMGIEEARRRLDEACRRLLANTVIEEYRIEIGE"
     gene            complement(1252..>2140)
                     /gene="purB"
                     /locus_tag="VK429_06515"
     CDS             complement(1252..>2140)
                     /gene="purB"
                     /locus_tag="VK429_06515"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010640386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HLN91496.1"
                     /translation="GIHAEPVTFGWKMALWADEVRRDISRLVRARDVISVGKISGAVG
                     TFANIDPTVEEYVCRKLRLSPAPASTQVIQRDRHAEVFATLAIVASSLDKFSTEIRHL
                     QRTEVLEVEEYFSAGQKGSSAMPHKRNPVLSENISGLSRLLRGYSVTAMENMALWHER
                     DISHSSAERVIAPDATILLHFALGRFRGMMEKLLVYPDRMRKNLESTHGLLYSQRVLL
                     ALTAKGFSRESAYEVVQRSAMKSWKTGRPLAALLWKDRDVRAALSKKEFDALFDIDYY
                     LKNIDGIIDRVFARKGGKA"
BASE COUNT          344 a          719 c          688 g          389 t
ORIGIN      
        1 acggctcgat gaaggagggg tggttgtggc tctccatctt gaagaccacc gcgagtccgt
       61 cgccgatgtc gacgatcccg gcgttttccc cgggaccttg caggacgcgg gggcccttcg
      121 tcgggaattt cctcagatgg atccgcgaac tcttgtagga gcagtgctcg ctccacatga
      181 cggagaagat cccgagctcc gtgaggctcg gggtgcgccc gaggatcccg aggaccgttc
      241 cgtattccgc gtccgagagg ccgtgctccc gcgcgcgttc cggggtaacc ggtttctccc
      301 tcatgccggc ttctcctcga gccaggcgac catcgcgtcg aacaggcggc gtccgtcggc
      361 gctccccagc acctcctccg cgctccgttc cgggtggggc atcatgccga ggacgttgcc
      421 tccctcgttg cagatcccgg cgatgttccg cgcggagccg ttcgggttgg actccgccgt
      481 cacgttccca tccgggtcgc agtagcggaa gacgacctgg ccccgctcct cgagagagga
      541 caaggtcctc ccgtccgcgt aataattccc ctggtaatgc gccacgggca tcttgaggat
      601 cgatccctcc gggattcccc gcgtgaacgg cgtgcgatcc gtgcccgcgc gcaggtggac
      661 gtagtcgcag acgaaccgga gggagtcgtt cacgatcatc gcccccggga gaagacccga
      721 ttcgagcagg atctggaaac cgttgcagat cccgatgacc ggtcccccgt cttcggcgaa
      781 ccggcgcacc gcccccatca cgggagagag cttcgccatc gccccggagc gcaggtagtc
      841 gccgtaggtg aagccgcccg ggatgacgac ggcgtcgaac ccgccgaggg aggatcgctt
      901 gtgccagacg aactccgcgt ccaccccgac cacgtgcttc agggcgtgat aggcatcgtg
      961 gtcgcagttg gatccgggga acacgaggac ggcggtcttc atcgcttttc ccctactccc
     1021 cgatctcgat ccggtactct tcgatcaccg tgttcgccag gaggcgtctg cacgcctcgt
     1081 cgaggcggcg acgcgcttcc tcgatcccca tctccttcag ggtgatctcc atgaactttc
     1141 cgacgcggac atcctccacc ccgtcgatcc cgaggtggga gagcgacgcg cggatcgctt
     1201 tcccctgcgg gtcgaggacc ccccgcttta gcgtgacgta gattttcgcc ttcacgcctt
     1261 ccctcccttt cgagcgaaca cccggtcgat gatcccgtcg atgttcttga ggtagtagtc
     1321 gatgtcgaac agcgcgtcga actccttttt cgacagcgcg gcgcgcacgt ccctgtcctt
     1381 ccagagaagc gccgcgagcg gccgcccggt cttccacgac ttcatcgcgg agcgctggac
     1441 cacctcgtac gccgattccc tcgagaaccc cttcgcggtc agggcgagga gcacgcgctg
     1501 cgagtagagc agcccgtggg tactctcgag gtttttccgc atccggtccg gatagacgag
     1561 gagcttctcc atcatcccac gaaaccggcc gagggcgaag tggaggagga tggtggcgtc
     1621 gggggcgatg acccgctccg cggaggagtg gctgatgtcc cgctcgtgcc agagcgccat
     1681 gttctccatc gccgtgacgg agtagccgcg cagcagccgc gagaggccgg agatgttttc
     1741 ggagaggacc ggattccgct tgtgcggcat ggcggaggac cctttctggc ccgcggagaa
     1801 gtactcctcc acctcgagga cctcggtccg ctgcaagtgc ctgatttccg tcgagaactt
     1861 atcgagagac gaggcgacga tggcgagcgt ggcgaacacc tcggcgtgcc ggtcccgctg
     1921 gatcacctgg gtggaggcgg gggcgggcga gagccggagc ttccggcata cgtactcttc
     1981 cacggtggga tcgatgttgg cgaaggttcc caccgccccg gagatcttcc cgaccgagat
     2041 cacgtcgcgc gcgcggacga ggcgggagat gtcgcggcgc acctcgtcgg cccacagcgc
     2101 catcttccac ccgaacgtca ccggctcggc gtggatgcca
//
LOCUS       DATGYW010000471         1738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_417505, whole genome shotgun sequence.
ACCESSION   DATGYW010000471 DATGYW010000000
VERSION     DATGYW010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417505"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1232
                     /locus_tag="VK429_06520"
     CDS             <1..1232
                     /locus_tag="VK429_06520"
                     /EC_number="6.5.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016872811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HLN91497.1"
                     /translation="GGLAAMDPEHGVISPGGIGFDINCGMRLCLTNLTYGEVQPRIRD
                     LVDRIAGRVPAGVGAEGTVRVTRDEFRQAVEQGARWAVKRGFGWKEDLERTEEGGCLP
                     GADASRVSEKAVDRGYRQIGTLGSGNHYLEIQVARAENVFDQETAGAFGIVLPDQVVV
                     MFHCGSRGFGHQVATDYLRVFLAAMQVKYHIHVPDRELACAPFLSPEGQDYFAAMKCA
                     VNMSFVNRQVILHRIREVFSEVFGKDPKDLGMRQVYDVSHNTAKIERHVFGGKPRELL
                     VHRKGATRAFGPGMPGLPDVYRDTGQPVILGGSMETGSYLLAGVDTGDCTFFTTAHGS
                     GRAMSRTAARKRYRGRQLQEQMEERGIYVRTASWSGLAEEAGPAYKNIDDVVEATERA
                     GLSRRVVRLLPVGNVKG"
     gene            1229..1666
                     /locus_tag="VK429_06525"
     CDS             1229..1666
                     /locus_tag="VK429_06525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009455074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="archease"
                     /protein_id="HLN91498.1"
                     /translation="MTPRYRYLEGIATADVAFEACGATLEETFLAAADATLNVMVEEI
                     GAVAPRELREISVAADSLDLLLFELLQELVYHKDAGRLLLRVRDLRIEESGSGFRLHA
                     DAIGETIDPERHSLLADVKAVTLYRLVVERIPDGWRAVVVLDV"
BASE COUNT          289 a          564 c          624 g          261 t
ORIGIN      
        1 tcggcggcct cgccgcgatg gaccccgagc acggtgtgat ctcccccggc ggaatcggct
       61 tcgacatcaa ctgcggaatg cggctctgcc tcacgaacct gacgtacggg gaagtccagc
      121 cgcggatccg agaccttgtg gaccggatcg ccgggcgcgt ccccgccggc gtgggggccg
      181 aggggaccgt ccgggtcacc cgggacgagt tccggcaggc ggtggaacag ggggcccggt
      241 gggcggtgaa gcgcggattc gggtggaagg aggacctcga gcgcaccgag gaagggggat
      301 gccttcccgg cgccgacgcc tcgcgggtga gcgagaaggc ggtcgaccgt gggtaccggc
      361 agatcggcac cttggggtcg gggaaccatt acctggagat ccaggtcgcc agggccgaaa
      421 acgtcttcga tcaggagacc gcgggagcct tcggcatcgt cctccccgac caggtagtcg
      481 tcatgttcca ctgcggcagc cgcgggttcg gccaccaggt ggcgaccgac tacctccggg
      541 tcttcctcgc ggcgatgcag gtgaagtacc acatccacgt tcccgaccgg gagctggcgt
      601 gcgccccgtt cctctccccg gaggggcagg actacttcgc ggcgatgaag tgcgccgtca
      661 acatgtcctt cgtcaaccgg caggtcatcc tccaccggat ccgcgaggtc ttctccgagg
      721 tgttcgggaa agacccgaag gacctcggga tgcgccaggt ctacgacgtc tcgcacaaca
      781 cggccaagat cgagcggcac gtcttcgggg ggaaaccgag ggaactgctc gtgcaccgga
      841 agggggcgac ccgggcgttc ggtcccggga tgccggggct ccccgatgtc tatcgggaca
      901 cgggccagcc ggtgatcctc ggcggaagca tggagaccgg gtcgtacctg ctggcgggag
      961 tcgacaccgg cgattgcacg ttcttcacca ccgcgcacgg cagcgggcgg gcgatgagcc
     1021 ggaccgcggc cagaaaacgg taccgcggac gccagcttca ggagcagatg gaggaacggg
     1081 ggatctacgt gcggacggcg agctggtccg gcctcgccga ggaggcgggt cccgcctaca
     1141 agaacatcga cgatgtggtc gaggcaaccg agcgcgcggg gctcagccgc cgggtggtcc
     1201 gcctcctccc ggtgggcaac gtgaagggat gaccccgcgg taccgatacc tggaagggat
     1261 cgccacggcg gacgtcgcgt tcgaggcgtg tggcgcgacg cttgaagaga cgtttctcgc
     1321 cgcagcggac gctacgctca acgtgatggt ggaggagatc ggggcggtcg ccccaaggga
     1381 gctccgggag atctccgtcg ccgccgattc cctcgatctc ctcctgttcg aactcctcca
     1441 ggagctcgtc taccacaagg acgccggccg gctcctgctg cgggtgcgtg atctgcggat
     1501 cgaggagagc ggatcggggt tccgtctcca cgccgatgcg atcggggaga cgatcgaccc
     1561 cgaaaggcac tccctcctcg cggacgtcaa ggcggtgacc ctgtatcgcc tcgtggtgga
     1621 gagaatcccg gacggatggc gcgccgtcgt cgtcctcgac gtctgaagac gcccccccct
     1681 tcccctcatc cgcgtggtat caggcacctg cctcggcggg gaaccagtga cgcgtccg
//
LOCUS       DATGYW010000472         2065 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_35902, whole genome shotgun sequence.
ACCESSION   DATGYW010000472 DATGYW010000000
VERSION     DATGYW010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2065
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35902"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1666
                     /locus_tag="VK429_06530"
     CDS             <1..1666
                     /locus_tag="VK429_06530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020735391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLN91499.1"
                     /translation="AGFYRRIDAGYERLLSLSLRHRGAVALVALAVMLSAIPLYGLIR
                     QDYLPANADEGEFNLNVTAPQGTSLAGMDGIMNDIVAEIRTVPGVRMVLSTAGGGWIG
                     GVSEARAYIRLAPHGERVFSLSRLLASTAGGDPLAAFRGNRSQLEVMQEVRRRLRKYR
                     DLRVSVRNITGFNIGGGSFDIDFVLRGPDLNALSTYAESLRDRQEALGLLDADTTLRL
                     DKPELRVEIDRARAADLRVDPEQIGTAVRLLVGGDEEVSRFKDPSNNEDYKVQLRLRE
                     EDRADPGTIGRLLVPREGGGVAQLDSVARIERVPSASRIDRLDRQREVRLRASVAPGF
                     ALADRLAALRGAVASMNLPAAYTTRVSGRGRELERTFGEFVWAFALSIVFMYMILASQ
                     FENLVHPFTILLSIPLCVPFALLSIWLMGNTLNLYSALGILVLFGVVKKNAILQIDHM
                     NNLRAGGMDKEPAILQGNRDRLRPILMTTLTFVAGMLPLAVGSGPGAEERRVIAVVVI
                     GGQTLSLLLTLLATPVVYSLLDDLALSFRRRKGFAIRSLFWWNEPR"
     gene            1698..>2065
                     /locus_tag="VK429_06535"
     CDS             1698..>2065
                     /locus_tag="VK429_06535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91500.1"
                     /translation="MEPSKIVARYRNGRTLKGTTQNFFPNKPDFHVSRHGGTGPEDVI
                     EVKLEELKAIFFVRDFTGNAKHVERKQLAPGERPQGRLMEVTFKDGEVIVGTTSGYDA
                     KRTGFFLFPIDPSANNARVFL"
BASE COUNT          335 a          665 c          706 g          359 t
ORIGIN      
        1 ggccggtttc tatcggcgga tcgacgccgg atacgagcgg ttgctctccc tatccctccg
       61 gcaccggggg gccgtggcgc tggtcgcgct ggccgtcatg ctttcggcca tccccctgta
      121 tggcctgatc cgccaggact accttcccgc gaatgcggac gagggggagt tcaacctgaa
      181 cgtcaccgcc ccgcaaggca ccagcctggc cggaatggac gggatcatga acgacatcgt
      241 cgccgagatc cggacggtgc ccggggtgcg gatggtgctc tcgaccgcgg ggggagggtg
      301 gatcggcggg gtgagcgagg cgagggcgta catccggctc gccccgcacg gggagcgcgt
      361 cttctcgctc tcccggctgc tggcgagcac cgcggggggg gatccactgg ccgcgttccg
      421 ggggaaccgc tcccagctgg aggtgatgca ggaagtgcgc cggagactcc gcaagtatcg
      481 cgatctccgc gtctcggtcc ggaacatcac cggattcaac atcggcggcg gatccttcga
      541 tatcgacttc gttctcaggg gaccggacct caacgcgctt tcgacgtacg cggagagcct
      601 gcgcgaccgc caggaggccc tcgggcttct cgacgccgac acgacgctcc ggctcgacaa
      661 gcccgagctg cgggtcgaga tcgaccgggc ccgcgccgcg gaccttcgcg tcgacccgga
      721 gcagatcggt acggcggttc ggctcctggt cggcggggac gaggaggtct cgcgcttcaa
      781 ggatccctcc aacaacgagg actacaaagt gcagctccgg ctccgcgagg aggaccgggc
      841 cgaccccggg acgatcggga ggctcctggt cccgcgggag ggtggcgggg tggcgcagct
      901 cgacagcgtc gcgcggatcg agcgggtccc gagcgcgtcg aggatcgacc gtctcgaccg
      961 gcaacgcgag gttcgcctcc gggcctcggt ggctcccggg ttcgcactgg ccgaccggct
     1021 ggcggcgttg cgcggcgcag tggcctcgat gaatttgccg gccgcctaca ccacgcgcgt
     1081 ttccgggcgg gggcgggagc tcgagcggac gttcggcgag ttcgtctggg cttttgccct
     1141 gtcgatcgtc ttcatgtaca tgattctcgc ctcccagttc gagaacctgg tccatccctt
     1201 caccatcctg ctctccattc cgctctgcgt gcccttcgcg cttctctcga tctggcttat
     1261 gggaaacacg ctgaacctct actcggccct cgggatcctc gtcctgttcg gcgtggtcaa
     1321 gaaaaacgcg atcctccaga tcgaccacat gaacaacctg cgggcggggg ggatggacaa
     1381 ggagccggcg atcctccagg ggaaccggga ccgccttcgg ccgatcctca tgacgacgct
     1441 caccttcgtg gccgggatgc tcccgctggc ggtcggctcc gggccgggcg ccgaggagcg
     1501 acgtgtgatc gccgtcgtcg tgatcggagg ccagacgctc tcgctcctgc tcacgctgct
     1561 cgcaacgccg gtcgtctact cgctgctcga cgacctggcg ctctcgttcc ggcgacgcaa
     1621 gggatttgcc atccgttcat tattttggtg gaatgagccg aggtaaggcg cttcaagccg
     1681 gaggacgggg gaatcccatg gaaccatcga aaatcgttgc ccggtatcgc aacgggagaa
     1741 ccttgaaggg caccacgcag aacttctttc ccaacaagcc ggactttcat gtcagtcgcc
     1801 acggagggac cggtccggaa gacgtcatcg aggtgaaact cgaggaactg aaggcgatct
     1861 tcttcgtccg ggatttcacg gggaacgcga agcatgtgga aaggaagcaa ctggcccctg
     1921 gcgagcgtcc gcagggccgg ctgatggagg tcaccttcaa ggacggggag gtgatcgtgg
     1981 ggacgacgag cggctacgac gcgaagcgca cggggttttt cctgttcccg atcgatccgt
     2041 cggcaaacaa cgcgcgggtc ttcct
//
LOCUS       DATGYW010000473         1521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_509570, whole genome shotgun sequence.
ACCESSION   DATGYW010000473 DATGYW010000000
VERSION     DATGYW010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_509570"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..628)
                     /locus_tag="VK429_06540"
     CDS             complement(<1..628)
                     /locus_tag="VK429_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN91501.1"
                     /translation="MTEEPRKIRVSVIPKPPKTVEETGLSLGFLVELACKTLYFGGVM
                     SLSSLSEQLALPVSVSNDVMEFLKKERLAEVKKGGDIRAAYTYALTDLGRERAREYLQ
                     LSGYFGAAPVTLAQYTEVARKQTVRKMAVNRESMDRAFEGVILTPGLLERLGPAVNSG
                     RSIFLYGPSGNGKTFIAERLAKVMSGNVFIPHALCVDNQVIRVFDPVNH"
     gene            complement(621..923)
                     /locus_tag="VK429_06545"
     CDS             complement(621..923)
                     /locus_tag="VK429_06545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91502.1"
                     /translation="MRRTILFLAICILAAAPGLAAEKPAAGGGSHSLRMEELEVRGLR
                     EKPEVLYLPVHRGIAIPSPVRYDLFLEDMARPVFPGEVLPEALGADGIPRQGASID"
     gene            complement(920..>1521)
                     /locus_tag="VK429_06550"
     CDS             complement(920..>1521)
                     /locus_tag="VK429_06550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91503.1"
                     /translation="YATLYTGLADWQRGETKASIRLMEEGLRIADAGVEEEAPGEFAE
                     LAGKVRVAVGENWAEQFRKTRLLVPLDKSLAIKDRFFRRALDAFERVESEAPLEVALQ
                     ASMLSGDLLVEYGKAILASQRPKGLKGSDREEYEEALRDRARSLYERSLDRYAGALDR
                     LEDEEGPADLAVPIRKRLETAQVLLEETMTAKAKEGKGP"
BASE COUNT          248 a          525 c          468 g          280 t
ORIGIN      
        1 agtggttcac cgggtcgaac acgcggatga cctggttatc cacgcagaga gcgtggggga
       61 tgaagacatt cccgctcatg accttcgcca gccgctcggc gataaacgtc ttgccgttcc
      121 ccgagggccc gtagaggaag atggagcgcc cggagttgac cgcggggccc aggcgttcca
      181 gcaggccggg ggtcaggatg accccctcga aggcgcggtc catcgactcg cgattcaccg
      241 ccatcttccg gaccgtctgt ttcctcgcca cctccgtgta ctgcgcgaga gtgacggggg
      301 ccgcgccgaa gtacccggag agctggaggt actccctggc cctctcccgt ccgaggtcgg
      361 tgagcgcgta cgtgtatgcg gcacggatgt ccccaccctt cttcacctcg gccagccgct
      421 cctttttcag gaattccatc acgtcgttcg acacgctgac gggaagcgcc agctgctcgg
      481 agagggacga cagggacatc acgccgccga aatagagggt cttgcacgcg agctccacga
      541 ggaatccgag ggagagcccg gtctcctcga cggtcttcgg tggcttgggt atcacggaca
      601 cgcgaatctt gcggggttct tcagtcaatg gacgctcctt gtcttgggat tccgtcggcc
      661 cccagggctt ccggcaggac ctccccgggg aagaccgggc gtgccatgtc ttccaggaac
      721 aggtcgtacc ggacggggga tggaatcgcg attccccggt gaacggggag atagaggacc
      781 tcgggcttct cccggaggcc gcgcacctcc agttcctcca tccggaggga atgcgaccct
      841 ccacccgcgg ctggcttttc cgcagccaag ccgggggcgg cggcgagaat acagatcgcg
      901 aggaacagga ttgtacgcct catggaccct tcccttcctt cgccttcgcc gtcatcgtct
      961 cttccaggag cacctgcgcg gtctccagcc gcttccggat cggaactgcg aggtctgcgg
     1021 gcccctcctc gtcctcgagc cggtccagcg cgccggcgta ccggtcgagg gatcgttcgt
     1081 agagcgatct cgcacgatcc cgcaacgcct cttcgtattc ttcgcggtcg cttcccttga
     1141 ggcccttcgg ccgctgggag gcgaggatcg ccttcccgta ctccacaagg agatcgcccg
     1201 aaagcatgga ggcctgcagc gccacctcga gaggtgcctc gctctccacc ctttcaaagg
     1261 cgtcgagggc acgccggaag aaccggtcct tgatggcgag gctcttgtcg agagggacca
     1321 gaaggcgcgt cttgcggaac tgctctgccc agttctcccc gacggcaacg cgtaccttcc
     1381 ccgccaattc agcgaactcc ccgggtgctt cctcttccac gcccgcgtcc gctatccgca
     1441 gcccttcctc catcaggcgg atcgacgcct tcgtctcccc ccgctgccag tccgccagcc
     1501 ccgtgtacaa agtggcgtac g
//
LOCUS       DATGYW010000474         3043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_187663, whole genome shotgun sequence.
ACCESSION   DATGYW010000474 DATGYW010000000
VERSION     DATGYW010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3043
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187663"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VK429_06555"
     CDS             complement(<1..279)
                     /locus_tag="VK429_06555"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HLN91504.1"
                     /translation="MRKTVILSLATIVLAVFCVAGISSAKEKGGEKVGIKLGAVPNVK
                     TQANGEATFVLAKDGGTIHYKLKVGKLENGTMAHIHEVGDNGSPAAILA"
     gene            complement(323..940)
                     /locus_tag="VK429_06560"
     CDS             complement(323..940)
                     /locus_tag="VK429_06560"
                     /inference="COORDINATES: protein motif:HMM:NF038013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HLN91505.1"
                     /translation="MAILSEARKESHDIPEPTVTVEPGIYKEWWANPAVVGLMGFATT
                     TMATGLHNVGYWGAGPTLAMAIAFGGTAQFVAGVVDLRKGSLFGGSAFMAYGAFWWSL
                     VVLDYLLPKTGITSGPNELLGYFLMWSLFTLSFFIASFKVGRHLNILFGLLLLAFLLL
                     DGVVIGRIPAAVAGGEIFITGLVAWYIATAILVNGVHGRKVLPHS"
     gene            complement(1188..1772)
                     /locus_tag="VK429_06565"
     CDS             complement(1188..1772)
                     /locus_tag="VK429_06565"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HLN91506.1"
                     /translation="MYRKAATIFSKGDPSNALFIIKTGRVRILSLSDKGTETIVHILK
                     EGAIFGELLLSEEKRAFTAVAGTDALVTVLSKGSLVEILAAIPTVSKNFIRLLSKRLT
                     KVEMEFGDFGHTWSYNRLAKILLQICEEHGKETPQGIMIPLRLTHEDLANLIGTTRET
                     VTTQMIRFRRMGLVKRQDRFLVINKPRLEEFSRS"
     gene            complement(1881..2654)
                     /locus_tag="VK429_06570"
     CDS             complement(1881..2654)
                     /locus_tag="VK429_06570"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HLN91507.1"
                     /translation="MRTERANIMKFRPKEQDRRARLLGGSELFLGLTAEESRKVSRRM
                     DEKRFPRGATIFRKDDPSDSLFALKEGLVKLVSHSAKGAETILYILRPTDIFGELLHV
                     EGRRPFNALAVTDVLVGVLSREDFIDLLSAIPRIRLNFIRILSRRLAFVEKGVGEFSH
                     TRSHQRLAKVLLQICAEHGVETPWGVRVHPSLTHAVLADMIGTTRGTVTNQLNRFHRM
                     GLVWSHRRHLVVNRRRMTAYVQSGGIRHRGKWLRLDKVA"
BASE COUNT          608 a          948 c          857 g          630 t
ORIGIN      
        1 ggcaaggatc gcggcggggg acccgttgtc gccaacctcg tggatgtgcg ccatggtgcc
       61 gttctcgagc ttgcccacct tcagcttgta atggatcgtg ccgccgtctt tcgccaggac
      121 gaacgtcgcc tccccgttcg cctgggtttt cacgttgggg acggcgccca gcttgatgcc
      181 gaccttttcc ccaccctttt cttttgcgga agagatgccg gccacgcaaa aaacggccaa
      241 gacgatcgtt gccaacgaga ggatcacggt cttgcgcatg tcgaatacct cctgtccaga
      301 tggtttctcc gccgggttgc cgtcacgaat gcgggaggac cttcctcccg tgaacaccat
      361 ttaccaggat ggcggtcgcg atataccagg ccaccaggcc ggtgatgaag atctcccctc
      421 ccgcaacggc cgccgggatc ctgccgatca ccacgccgtc gaggagcagg aaggccagca
      481 gcaatagacc aaacaggata tttagatgcc ttccgacctt gaacgatgca atgaagaagg
      541 acaacgtgaa cagggaccac atgaggaaat acccgaggag ttcgttcggg cccgacgtaa
      601 tcccggtttt ggggagcaga tagtccagga cgaccaggga ccaccagaag gcgccatacg
      661 ccatgaacgc ggaacccccg aacaggctcc ctttccgcag gtcgacgaca ccggcgacga
      721 actgcgcggt gcctccgaac gcgatcgcca tcgccaaggt cgggccggcg ccccaatacc
      781 cgacgttgtg caaccccgtg gccatggtcg tcgtggcgaa ccccatcaag cccaccaccg
      841 ccggattcgc ccaccactcc ttgtagattc ccggctcgac ggttaccgtc ggctccggga
      901 tgtcatggga ctccttcctt gcttccgata ggattgccat tgcctttcct cccttttcgc
      961 ggacggtgga atccgccgtc ccgcatctcc tgtcccgttg cccgccgcac cggcagggaa
     1021 aggatttccg ttccctgtcc ccccctttct ttctgaccgt aagataacag tgggggggga
     1081 gaacgtttgt gaaagcttgt acaaaaatga ttatttgtta gacggtaggt aagcggggtg
     1141 tatccacccg acgcgttccg gctcgtgccg gcagcagtga gcggggatca ggagcggctg
     1201 aattcctcga gtcgaggctt gttgataacg aggaagcggt cctgacgctt cacgagcccc
     1261 atgcgccgga accggatcat ctgggtcgtg accgtctccc gggtggtccc gatcaggttc
     1321 gccaggtcct cgtgcgtcag gcgcaagggg atcatgatcc cctgtggggt ctccttgccg
     1381 tgctcttcgc agatctggag caggatcttc gcaaggcggt tgtaggacca ggtgtgcccg
     1441 aaatccccga attccatctc caccttcgtc agccgcttcg agagcagtcg gatgaaattc
     1501 ttcgatacgg tggggatggc ggcaaggatt tccaccagac ttcccttcga gaggacggtg
     1561 accagggcat ccgtaccggc gacggcggtg aaggcccgct tctcttcgga gaggaggagt
     1621 tccccgaaga tcgcgccttc cttaaggatg tgcacgatcg tttcagtccc tttgtccgaa
     1681 agggagagaa ttctcaccct tccggtctta atgatgaaga gagcgttcga cgggtcgccc
     1741 ttggagaaaa tcgtggcggc tttccgatac atccgctcgg cgcacaggcg tgcgatcctc
     1801 tgtgactcgg tttcggaaat cccctggaac aactcgacgg ctgtgttact ggataacggc
     1861 ataaccccac attacaaccg ctatgcgact ttatccagtc gaagccactt tccgcggtgt
     1921 cgaatacccc ctgattgcac ataggccgtc atgcgtcggc ggttcacgac gaggtgacgc
     1981 ctatggctcc ataccaggcc catccggtgg aagcggttca gctggttcgt gacggttccc
     2041 cgggtggtgc cgatcatgtc cgcaaggacc gcgtgcgtca gcgacgggtg gaccctgacc
     2101 ccccagggag tttccactcc gtgttcagcg caaatctgaa ggaggacctt tgccaaccgc
     2161 tgatgagacc ttgtgtggct gaattcccca acccctttct cgacaaaggc caggcgcctt
     2221 gacagaatcc ggatgaaatt caggcggatc cggggaatcg ccgacagaag atcgataaaa
     2281 tcttcccgtg aaaggacgcc gacaaggaca tccgtcacgg ccagggcatt gaaaggacgc
     2341 ctcccctcga cgtggaggag ctccccaaag atatcggtcg gccggagaat gtagagaatc
     2401 gtctccgcac cctttgccga gtgggaaacg agttttacca acccttcctt cagagcaaag
     2461 agggaatcgc tgggatcgtc cttccggaag atcgtcgctc cacgcgggaa gcgcttctca
     2521 tccattcgcc gggagacctt tcgggactcc tccgccgtaa ggcccaggaa cagctcggaa
     2581 cccccaagga gcctcgcccg cctgtcctgc tccttcggcc ggaacttcat gatattcgcc
     2641 cgttccgtcc tcatcgcaac cgcatcgcca cgccgccttg cggcacctcc gcagagatgt
     2701 ttcatatcgc tctcctgttc cttcgccctc ttgcttcgca aactttgtct tcccctaatt
     2761 cgacgctatt ggacgcccgg aggtaacgcc gtgaaagctt atacaaggat ttattttgtt
     2821 ttcgtctggc cgccccatcg gggaaccacg catcctgagg gatccgcgtc agactcccgg
     2881 gaaaggtctc atcgccaatg taaaatgatt tattcagggg gccccgccgg gacgcttcct
     2941 ccttgccggt ggaaggcgaa tacctcaccc catgtcgggt cttgagaaag agatattcaa
     3001 tggaaaccac gcttcggggg attgcgccaa tccgcaatcc ccc
//
LOCUS       DATGYW010000475         1893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_250023, whole genome shotgun sequence.
ACCESSION   DATGYW010000475 DATGYW010000000
VERSION     DATGYW010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_250023"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..767
                     /locus_tag="VK429_06575"
     CDS             <1..767
                     /locus_tag="VK429_06575"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91508.1"
                     /translation="LAARPEGRDAIPAPPGSEPDRGGNTVNPLLSAEGITKSFGPTRV
                     LSGVTLAVAPGEPVGLFGPNGSGKTTLVNILSGLLPPDAGTVRFDGKEITRLPLDARY
                     RLGIARTFQIPHPYPALSVREAVRVALAVSAGKGKEGGGSREDEEGPAEDLLARTGLF
                     NQRFVPCAQLSQGCLRRLEFARALACRPKLLILDEIFSALSTADEEDLMALLRAENRD
                     GGTAFLLVSHNPPLLKSLCRRILVLGEGRIVRERTV"
     gene            767..1531
                     /locus_tag="VK429_06580"
     CDS             767..1531
                     /locus_tag="VK429_06580"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91509.1"
                     /translation="MTGGTSTLKVRDLTVAFGQVVAVRDVSVTARKGETVAIFGANGS
                     GKTTFLKAVAGLVPATRGKVSWRGEDVTALPAHERAARGMRYVSDRSRVATRMTVLEN
                     LEAGAWLLPASRWSAAREHVFSLFPALAEKARSPAGVLSGGERQMLILGRALVAEPTL
                     LLMDEPFLGLSREVRDRLLSVIEGTLKGRATILFAEHDAEGAYRLLDRYVVFRNGSLV
                     HEGTRSDVADAKDLVSLLYRHFRPGESPGETIGEGT"
     gene            1563..1748
                     /locus_tag="VK429_06585"
     CDS             1563..1748
                     /locus_tag="VK429_06585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91510.1"
                     /translation="MGGKVGGEKGNAERETVSVTVTLPAALVDQMKEFCRNCRVPRDI
                     VVERALVEYFREGDMSH"
BASE COUNT          293 a          609 c          701 g          290 t
ORIGIN      
        1 gcctcgcggc tcggccggaa ggaagggacg cgatccccgc gccgccgggg tcggagccgg
       61 accggggagg gaacacggtg aacccgcttc tgtcggcgga agggatcacg aaatcgttcg
      121 gccccacgcg agtcctctcc ggggtcaccc tggcggtcgc ccccggggaa ccggtggggc
      181 tgttcggccc gaacgggtcg gggaagacca ccctcgtcaa cattctctcg gggcttcttc
      241 cccccgacgc cggcacggtc cggttcgacg ggaaggagat cacccggctt ccgctcgacg
      301 cccggtaccg gctcggcatc gcgcggacct tccagatccc tcacccatac cccgcccttt
      361 ccgttcgcga ggcggtgcgc gtcgccctcg cggtcagcgc cgggaaaggg aaggaagggg
      421 gcgggtcccg ggaggacgag gagggaccgg ccgaggatct cctcgcccgg acgggactgt
      481 tcaaccagcg gttcgtcccg tgcgcccagc tgtcccaggg gtgcctccgc cgcctcgagt
      541 tcgcgcgggc gctggcgtgc cggccgaagc tgctgatcct cgacgagatc ttctccgcgc
      601 tctctaccgc ggacgaggag gacctgatgg cgctgctgcg cgcggagaat cgcgacggag
      661 ggacggcgtt ccttctggtc tcccacaacc cgccgctcct gaaaagcctc tgcaggcgca
      721 tcctcgtgct cggggagggg cggatcgtgc gggagaggac cgtatagtga ccggggggac
      781 gtccacgctg aaggtccgcg acctcaccgt cgccttcggt caggtggtgg cggtgcggga
      841 cgtctccgtc acagcgagaa agggggaaac ggtggcgatc ttcggcgcaa acggctcggg
      901 aaagaccacc ttcctcaagg cggtggcggg gctggtcccg gccacgcggg gaaaggtctc
      961 gtggcggggc gaggacgtta cggcgcttcc ggcccacgag cgggccgcgc gggggatgcg
     1021 gtacgtctcc gaccggtctc gggtggcgac gcggatgacc gtcctcgaga acctcgaggc
     1081 cggcgcgtgg ctccttcccg cctcccggtg gagcgcggcg cgcgagcacg tgttctccct
     1141 cttccctgcg ctggccgaga aggcgcggtc tcccgcggga gtgctctcgg gcggagagcg
     1201 ccagatgctg atcctcgggc gggcgctggt ggcggagccg acgcttctcc tgatggacga
     1261 gccgttcctc gggctctccc gggaagtccg cgaccggctg ctctccgtga tcgaaggaac
     1321 gttgaagggg cgggcgacga tcctcttcgc cgagcacgac gcggaagggg cgtaccggct
     1381 cctcgaccgg tacgtcgttt tccggaacgg ctccctggtc cacgagggga cgcggtcgga
     1441 cgtcgccgac gcgaaggatc tggtctcgct gctctacagg catttccggc cgggggaatc
     1501 ccccggggag acgatcggcg agggaaccta agggggcgag cctccttacg aaagggaaaa
     1561 ccatgggcgg gaaggtcggc ggggaaaagg gaaacgcgga gagggaaacg gtatcggtga
     1621 cggtgacgct gccggcggcg ctggtcgatc agatgaagga attctgccga aactgccgcg
     1681 tgccgcgcga catcgtcgtg gagcgcgcgc tggtcgaata tttccgcgaa ggggacatga
     1741 gccactgagt gcagcgtctc cgggactccc attcgggggt gccccccgtt cttcctactg
     1801 agggggtacc ccagggagtg tagacattat ggagtgaccg gccccatcgc atataacgtg
     1861 ggttagcctg gcggagcccg gccagagcca cat
//
LOCUS       DATGYW010000476         1687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_417730, whole genome shotgun sequence.
ACCESSION   DATGYW010000476 DATGYW010000000
VERSION     DATGYW010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417730"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..724)
                     /gene="tig"
                     /locus_tag="VK429_06590"
     CDS             complement(<1..724)
                     /gene="tig"
                     /locus_tag="VK429_06590"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HLN91511.1"
                     /translation="MKNSVDAVSGVERKITVEIPAEEVDRRIEQEFTELRRMVPVRGF
                     RKGKAPMEMVKRMFRDSVEAEVSEHLVKESLTEVVKEKDLKVLSMGAVDGAKLVAGED
                     FVFSATVEVIPEIEAKDYKGIPVYKEKVTVTDEDVAAAIERLRTPYAHFMPDEGRKAR
                     IGDLAEFGFTATAGDETVDSNDNVSVVLSNGIPFGKEFEEKMLGVGAGDTRAFEITFP
                     AEHPVPKYAGKTVAFEVKVANVR"
     gene            complement(771..852)
                     /locus_tag="VK429_06595"
     tRNA            complement(771..852)
                     /locus_tag="VK429_06595"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(817..819),aa:Leu,seq:tag)
     gene            complement(930..1325)
                     /locus_tag="VK429_06600"
     CDS             complement(930..1325)
                     /locus_tag="VK429_06600"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HLN91512.1"
                     /translation="MNMFRRERRAKERHRPLATVVFTVRSGKDPGRVSSPVTGDAQDV
                     SPMGMSVVTPRLAPDGIHIMYDTLMTFRNRIDATIFPEGKPPVRVQGTVVWFRAAETP
                     PGFYIFGMRFDQEAPSLEELRLAARKDPE"
     gene            complement(1322..>1687)
                     /locus_tag="VK429_06605"
     CDS             complement(1322..>1687)
                     /locus_tag="VK429_06605"
                     /inference="COORDINATES: protein motif:HMM:NF025690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HLN91513.1"
                     /translation="KWRKRPSGPPEAAGVVGDLKNLGVPDIVQTLHLGLKTACVRVTG
                     KGGEGKIWFEIGRIRHAELGSLSGELAFYEMLRWQEGPFVIAHAQSTKLRTIEMDEMQ
                     LMMEGLRRLDEERKEGPVG"
BASE COUNT          269 a          599 c          487 g          332 t
ORIGIN      
        1 cgcggacgtt ggcgaccttc acctcgaacg ccacggtctt tccggcgtat ttcggcacgg
       61 ggtgctccgc cgggaaggtg atttcgaagg cacgggtgtc cccggcgccg accccgagca
      121 tcttttcctc gaactccttc ccgaacggga tgccgttgga aaggacgacc gacacgttgt
      181 cgttgctgtc caccgtttcg tcgcccgcgg tcgccgtgaa cccgaactcc gccagatcgc
      241 cgatccgggc cttccgccct tcatcgggca tgaagtgcgc gtacggggtc cggaggcgct
      301 cgatcgccgc cgccacgtcc tcgtcggtca cggtcacctt ctccttgtag acggggatcc
      361 ccttgtaatc cttcgcctcg atttccggga tcacctccac cgtggccgag aagacgaaat
      421 cctcccccgc gaccagcttg gcgccgtcca cggcgcccat ggaaagcacc ttgaggtcct
      481 tttccttcac cacctcggtg agcgactcct tcaccaggtg ctccgacacc tcagcctcga
      541 ccgagtcgcg gaacatccgc ttcaccatct ccatcggggc cttccccttg cggaacccac
      601 gaaccggaac catccggcga agttccgtga actcctgctc gatccggcgg tccacctctt
      661 ccgccgggat ttcgaccgtg atcttccgtt cgacgccgga aacggcgtcc acgctgtttt
      721 tcatcgcttt acggttcccc ttttccattc gatgatgttc gtcggcaacc tggtgcgaga
      781 ggagggactt gaaccctcac ggttgcccac cggatcctaa atccggcgcg tctgccattc
      841 cgccactctc gccccgttcg acggcgccaa atgtgacagt atagacgatt ctcccggccg
      901 cctcaacgcc gcacaaccgg gggtgccggt tattcggggt ctttcctggc ggcgagccgg
      961 agctcctcga gggacggcgc ctcctggtcg aaccgcatgc cgaagatgta gaagcccggc
     1021 ggcgtctccg cggcacggaa ccagaccacg gtcccctgca cccggacagg cggtttcccc
     1081 tccggaaaaa tggtggcgtc gatccggttc cggaaggtca tgagggtgtc gtacatgatg
     1141 tggatgccgt ccggggcgag gcggggagtc accacggaca tccccatggg ggagacgtcc
     1201 tgggcatccc cggtgacggg ggaagaaacc cgcccgggat cctttccgct gcgaacggtg
     1261 aagacgacgg tggccaatgg acgatgccgc tcctttgctc ttcgttcccg gcggaacatg
     1321 ttcatcctac cgggccttcc ttcctctcct cgtcgagacg gcgcagccct tccatcatga
     1381 gctgcatctc gtccatctcg atcgtgcgga gtttcgtcga ctgcgcgtgc gcgatgacga
     1441 acggcccctc ctgccagcgc agcatctcgt agaaggccag ctcccccgag agactgccca
     1501 actcggcatg ccggatccgt ccgatctcga accagatctt cccttcgccg ccctttccgg
     1561 tgacgcggac gcaggcggtc ttcaggccca gatgaagcgt ctggacgata tcggggactc
     1621 cgaggttctt caggtcaccc accacccccg cggcctcggg ggggcccgac ggcctcttgc
     1681 gccactt
//
LOCUS       DATGYW010000477         1781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_36119, whole genome shotgun sequence.
ACCESSION   DATGYW010000477 DATGYW010000000
VERSION     DATGYW010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36119"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..470
                     /locus_tag="VK429_06610"
     CDS             <1..470
                     /locus_tag="VK429_06610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015887341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HLN91514.1"
                     /translation="RRTAMAVAEKVGISRVIAEVLPDRKAHEIRALQAEGKVVAMAGD
                     GINDAPALAQADVGIAMGTGADIAVEAGDLVLMGGELRGVADAISLSRATLRNIRQNL
                     FWAFAYNVVLIPVAAGVLYPSFRLLLNPVYAAAAMGLSSVTVVTNALRLRRFR"
     gene            484..1668
                     /gene="rnd"
                     /locus_tag="VK429_06615"
     CDS             484..1668
                     /gene="rnd"
                     /locus_tag="VK429_06615"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016891 - RNA endonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HLN91515.1"
                     /translation="MEKEPKGRVVTDPSEFRDLVAMMRTSGKVGFDTEFVGERTYFPR
                     LCLIQLGTETMSVAVDPLVVGDLSPLDDLLFDESVLKLVHAGWQDLKIVHQRTGRVPA
                     PVFDTQIAAALLGLPAQAAYASVVHEFLRVEVKKGHSYSDWAARPLSPSQLAYALDDV
                     RYLPALHDRMVERLGREGRLSWIEPEIAALSSPASYETDPWLEYRRVKGWAALDRRRL
                     AVLRALIAWREGEARRRDVPRRRVLADESALAIARSKPANEEALRRVRGLEWKAGGGS
                     PAAVLALVRDALALPEDRLPESPPSRPRGNGDRGSIVALLGALVRSRSRVHRVAPEVL
                     TNADELERLASGEREGIAVLSGWRRDLLGKELLALLEGRLSLVIHRGEVALEERDATA
                     KR"
BASE COUNT          255 a          573 c          672 g          281 t
ORIGIN      
        1 accggcgcac cgcgatggcg gtcgcggaaa aggtcggtat ctcccgggtg atcgcggagg
       61 tcctcccgga ccggaaggcg cacgagatcc gggcgctcca ggcggagggg aaggtcgtcg
      121 cgatggcggg ggacgggatc aacgacgccc cggcgctcgc gcaggccgac gtcggcatcg
      181 cgatggggac cggcgcggac atcgccgtgg aggcggggga cctggtgctg atgggagggg
      241 agctgcgggg ggtggccgac gccatctcct tgagccgcgc caccctgcgc aatatccggc
      301 agaacctatt ctgggcgttc gcctacaacg tggttctcat cccggtcgcc gcgggagtac
      361 tctatccctc gttccggttg ctgctgaacc cggtgtacgc cgccgccgcg atggggctct
      421 cctcggtgac ggtcgtcacc aacgccctgc ggttgcgtcg attccgatag gaaaagaggg
      481 ggaatggaga aggaaccgaa ggggcgggtc gttacggacc cgtcggagtt tcgcgacctg
      541 gtcgccatga tgcgtacctc cggaaaggtc gggttcgaca ccgagttcgt gggggagcgg
      601 acctacttcc cccggctctg cctgatccag ctcggcacgg agacgatgtc cgtcgcggtc
      661 gaccctctcg tggtcggcga tctgtcgccg ctcgacgacc tgctcttcga cgaatcggtc
      721 ctcaagctgg tgcacgccgg gtggcaggat ctgaagatcg tccaccagcg gaccgggcgt
      781 gtccccgcac cggtcttcga cacccagatc gccgcggccc tcctcgggct tcccgcccag
      841 gcggcgtacg cgtcggtggt ccatgagttc ctgcgagtcg aggtgaaaaa ggggcactcg
      901 tactccgact gggccgcgcg gcccctctcc ccgtcccaac tcgcgtacgc cctggacgat
      961 gtccggtatc tgcccgcgct gcacgaccgg atggtcgaac ggctggggcg ggaagggcga
     1021 ctctcgtgga tcgaacccga gatcgccgcg ttgtcctcgc ccgcatccta tgagacggac
     1081 ccctggctgg agtaccgccg cgtcaagggg tgggcggccc tggaccgtcg acgactggcg
     1141 gtgctccggg ccctgatcgc gtggcgggag ggggaggcga ggcgccggga cgtcccccgc
     1201 cgccgcgtgc tggccgacga aagcgcgctg gcgatcgccc gaagcaagcc cgcgaacgag
     1261 gaggcgctgc gtcgcgtgcg cggcctggag tggaaggccg ggggtgggtc gccggcggcc
     1321 gtcctggcct tggtgcggga cgcccttgca ttgccggagg atcggctccc ggagtccccc
     1381 ccttcgcggc cccgcggcaa cggggaccgc ggatcgatcg tggcgctcct gggcgcgctc
     1441 gtgcgctccc gatcgcgcgt gcaccgggtc gcgccggagg tgctgacaaa cgccgatgag
     1501 ctggagcgac tcgcgtccgg ggagcgggaa gggatcgcgg tgctatccgg gtggcggcgc
     1561 gatctactgg ggaaggaatt gctcgccctg ctcgaggggc ggctctccct cgtgatccac
     1621 cggggggaag ttgccctcga ggagagggac gccacggcga agcggtgaag ggattctcga
     1681 tgggaagaaa tgcgtctctc ctggccgctc tcttgctgac gggtagcgtc ctgttcacac
     1741 agggaggatg tgcggtgggc gtgagcgccg ggaagggcgc c
//
LOCUS       DATGYW010000478         3269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_137647, whole genome shotgun sequence.
ACCESSION   DATGYW010000478 DATGYW010000000
VERSION     DATGYW010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3269
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137647"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..237)
                     /locus_tag="VK429_06620"
     CDS             complement(<1..237)
                     /locus_tag="VK429_06620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018130329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91516.1"
                     /translation="MLGNFLKKMFGTQNERVLDRIRPTVDRVNALESSIRPLSDERLA
                     AKIAEFRQRAENGEPLEDLLPETFAVVREAGKRVL"
     gene            complement(263..1144)
                     /locus_tag="VK429_06625"
     CDS             complement(263..1144)
                     /locus_tag="VK429_06625"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HLN91517.1"
                     /translation="MSGDHLFTFRVGYAGRSREVRVGRTAAMVAASVLGVLFVLLTQG
                     IYDIRDNISKLHELRALRERVSEQNLALYHLDAKFEGLSAEVERLRAMDNRIRSLVKA
                     NDSLWRKSSAGVGGAETPEVSVANRLDKLLDLKFDRMKKDLLVQVNDLDVLGETLDSR
                     RLLLESVPGGWPVRGTLSSVFGVRTSPFTETPVFHHGLDIVARTGMPVAASAPGVVVK
                     SGYEAQYGNTVVIDHGAGYRSVYAHMSSTSVEEGALVNRGEELGKVGSTGRSTGPHLH
                     YEVRVNGLPVNPARFLN"
     gene            complement(1251..1442)
                     /locus_tag="VK429_06630"
     CDS             complement(1251..1442)
                     /locus_tag="VK429_06630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013249094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91518.1"
                     /translation="MVNNDKMVRCPRCNGAMVFERFQDMLTLFYSWRCVNCGEIVDPV
                     VSKNREPARGTNKKKAVGE"
     gene            1582..>3269
                     /locus_tag="VK429_06635"
     CDS             1582..>3269
                     /locus_tag="VK429_06635"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HLN91519.1"
                     /translation="MAKKRLGEYLLETGLLSEEALARALGEQRSKRGKLGEVIVGLGL
                     ATEQEIAQALSLQLGIPTIDLKNSPVEPQAIELIQEKVSRKHLIIPVAIEQRDLHIAM
                     ADPLSFEAFEDVRFASGFTIKPFIAPRSDILWAIDQHYHLGSSLSTIVKDIVDERQIE
                     VVQDSQDAEGRDLDDLRKKSEAAPVIRMVNLIVATAVDQGASDIHVEPTKTALQIRHR
                     VDGLLRKTMDLPKWVQGAVVSRIKIMARMDIAEKRLPQDGRIGVRVGGRNLDLRVSTV
                     PANYGEKVVIRILDSANANIPLELIGFSAGEMAKMVDIISRPQGIVLITGPTGSGKTT
                     TLYGILNRIKSVEDNITTIEDPIEYELPGINQVAVQEKIGLNFAVMLRSMLRQDPDII
                     MVGEMRDLDTTTIAVQAALTGHLVLSTIHTNSSVATITRLRDLGVPSYLIASTIVGIV
                     AQRLVRKVCVKCRVKSDPTELDILRLGISANIPVYRGAGCTECSGTGYKGRTGIYEIL
                     TFTQPIRDLIAGNATENEIRQAAISRGMVTLGRSALEKVTSGITTTDEVYRVVET"
BASE COUNT          632 a         1050 c         1044 g          543 t
ORIGIN      
        1 gaggacgcgc ttccctgcct ccctgacgac ggcgaacgtt tcgggaagga ggtcctccag
       61 cggttcaccg ttctctgccc gctggcggaa ttcggcgatc ttggcggcaa gccgttcgtc
      121 ggagagaggg cggatcgatg actcgagcgc attcacccgg tccacggtcg ggcggatccg
      181 gtcgaggacc cgctcgttct gcgtgccgaa catctttttc aggaagtttc cgagcatgat
      241 ggggggcccc gcggatgatc cgtcagttca ggaagcgcgc ggggttcacc gggaggccgt
      301 ttacgcggac ctcgtaatgc aggtggggcc cagtggaacg ccccgtggag ccgactttcc
      361 ccaattcctc tcccctgttg accaacgccc cctcttcgac gctggtcgac gacatgtggg
      421 catagacgga acggtacccc gcgccgtggt cgatgacgac cgtgttcccg tactgcgcct
      481 cgtagccgct tttcaccacg acgcccgggg ccgaggccgc gaccggcatc cccgtccggg
      541 cgacgatgtc caggccgtgg tggaagacgg gggtttcggt gaacggggag gtgcgcaccc
      601 cgaacacgga ggagagggtc ccgcggacgg gccagccgcc cggaacgctt tcgaggagca
      661 gcctgcggct atcgagggtt tcgccgagga cgtcgaggtc gttcacctgg accaggaggt
      721 ctttcttcat ccggtcgaac ttcaggtcga ggagcttgtc gaggcggttc gcaacggaga
      781 cctcgggggt ctccgccccg ccgaccccgg cggacgattt cctccagagg gagtcattcg
      841 ccttcacgag cgaccggatc cggttgtcca tggcccggag ccgctcgacc tcggccgaaa
      901 gaccctcgaa cttggcgtcc agatggtaca gcgcaaggtt ctgctcggac acccgctcgc
      961 gcaaggcccg caactcatgc aatttcgaaa tgttgtcgcg gatatcgtag atcccttggg
     1021 tcaaaaggac gaacaggacc ccgaggacgg aggcggcgac catcgcggca gtgcgcccga
     1081 cccggacttc gcgggatcga ccggcatacc cgacgcggaa tgtgaacaga tgatcgccgg
     1141 acaacgcacc ccacccccat tgcggaaagg aaaagagatg gcagggtagc acaccgggat
     1201 cgccgctgtc aacgtaatga aaacagaaag aaaatcggca ggatgcatta tcattcgccc
     1261 accgccttct tcttgttggt cccgcgggcc ggctcccggt tcttcgatac gaccgggtcc
     1321 acgatctcgc cgcagttcac gcacctccac gagtagaaca aggtcagcat atcctggaag
     1381 cgctcgaaca ccatcgcgcc gttgcagcgg gggcaccgca ccatcttgtc gttattgacc
     1441 attttccctt ccctcccttc gactttacga tgcaccggga acgggtcggt ttcaattcca
     1501 ggttgcggat ccttccaccc ttattatagg atggcggttg tccgtgggga acccttctgc
     1561 ggcgaggaga acctcgagaa aatggcgaag aaacggctgg gggaatacct cctcgagacc
     1621 ggcctcctga gcgaggaggc ccttgcgaga gccctggggg agcagcgctc gaagcgggga
     1681 aagctcgggg aggtgatcgt cggcctcgga ctggccacgg aacaggagat cgcccaggcc
     1741 ctctccctgc agctcggcat ccccacgatc gacctgaaga acagccccgt ggagccccag
     1801 gcgatcgagc tcatccagga aaaggtgtcc cggaagcacc tcatcatccc cgtcgcgatc
     1861 gaacagcgcg acctgcacat cgcgatggcc gacccgttga gcttcgaggc gttcgaggat
     1921 gtccggttcg cctccggctt caccatcaag ccgttcatcg ccccccggtc cgacatcctc
     1981 tgggccatcg accagcatta ccacctcgga tcgtccctca gcaccatcgt caaggacatc
     2041 gtggacgagc gccagatcga agtggtgcaa gactcccagg acgcggaggg gagggacctc
     2101 gacgatctgc ggaagaagtc cgaggccgcc cccgtcatcc ggatggtgaa cctgatcgtc
     2161 gccacggcgg tcgaccaggg ggcctccgac atccacgtgg agccgacgaa gacggccctc
     2221 cagatccgtc accgggtcga cgggctcctt cgcaagacga tggatcttcc gaagtgggtc
     2281 cagggggcgg tcgtgtcgcg gatcaagatc atggcgagga tggacatcgc cgagaagcgg
     2341 ctcccgcagg acggccggat cggcgtccgc gtgggggggc gcaacctcga cctgcgggtc
     2401 tccacggtcc cggccaatta cggggagaaa gtggtcatcc ggatcctcga ctccgccaac
     2461 gcgaacattc cgctggaact gatcggtttt tccgccgggg aaatggcgaa gatggtggac
     2521 atcatctccc gtccgcaggg gatcgtcctc atcacggggc ccacggggtc gggaaagacg
     2581 accactctct acgggatcct gaaccggatc aaatccgtcg aggacaacat cacgacgatc
     2641 gaagacccga tcgagtacga actgccaggg atcaaccagg tggcggtaca ggagaagatc
     2701 ggcctcaact tcgccgtcat gctccgctcg atgctgcggc aggacccgga catcatcatg
     2761 gtgggggaga tgcgcgacct ggatacgacc acgatcgccg tccaggcggc cctcacgggg
     2821 cacctggtgc tctccacgat ccacaccaac tcctccgtgg cgacgatcac ccggctgcgc
     2881 gacctcgggg tgccctccta cctgatcgcc tccacgatcg tcgggatcgt ggcgcagcgc
     2941 ctggtccgca aggtctgcgt gaaatgcagg gtgaagtccg accccacgga gctggacatc
     3001 ctccggctgg ggatctccgc caacattccc gtctaccgcg gggccggatg tacggagtgc
     3061 agcggcacgg ggtacaaggg acgcaccggg atctacgaga tcctgacgtt cacccagccg
     3121 atccgggacc tgatcgcggg caacgcgacg gagaacgaga tccgccaggc ggcgatttcc
     3181 agggggatgg tgacgctcgg ccgcagcgcg ctggaaaagg tgacctccgg catcacgacg
     3241 accgacgaag tgtatcgggt ggtggaaac
//
LOCUS       DATGYW010000479         1678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_311921, whole genome shotgun sequence.
ACCESSION   DATGYW010000479 DATGYW010000000
VERSION     DATGYW010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311921"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..852)
                     /gene="mdh"
                     /locus_tag="VK429_06640"
     CDS             complement(<1..852)
                     /gene="mdh"
                     /locus_tag="VK429_06640"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011421278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HLN91520.1"
                     /translation="MARKKIALIGGGQIGGVLAQLCAQRELGDVVLFDIVEGLPQGKC
                     LDIAEVGPVEGFDVSLKGTNNYADIAGSDVVIVTAGLPRKPGMSRDDLIGVNSKIMSQ
                     VAEGIKTYAPNSFIIVISNPLDAMVTLCQKITGFPYNRIIGQAGVLDSARFAAFIAWE
                     LGVSVRDVTAMTLGGHGDDMVPLIRFTSVAGIPVMELLEKKYGNAAKAKEAMDAMVNR
                     TRKAGGEVVALLKTGSAFFSPASAAIAMVESILKDQKRVLPSCVYLNGEFGVKGYFVG
                     VPAVLGAG"
     gene            complement(962..>1678)
                     /locus_tag="VK429_06645"
     CDS             complement(962..>1678)
                     /locus_tag="VK429_06645"
                     /inference="COORDINATES: protein motif:HMM:NF039580.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate acyltransferase"
                     /protein_id="HLN91521.1"
                     /translation="KDGALRTPRLGLLDYMTRAFDPMGGRDIVFIPVGINYDRTLEDR
                     SQVLALGTEAPRRGAGFAAATSLKFLLRNLLLMLQGRWYRFGYACVNFGSPLSMRAYS
                     RERGIDLRTLPREERFLEVGKLAASLMRSVGRVVPVLPVSLVATALLRFPGGCCSELE
                     LKAEALRVIEELSGAGAHIYIPRADQDYAVTVGLRMLTLRKLVSENDGLYKPVPEEIP
                     LLLYYANSIRHLFPETGVRG"
BASE COUNT          295 a          552 c          541 g          290 t
ORIGIN      
        1 gccggctccc agcacggccg gcacaccgac gaagtacccc ttcaccccga actcgccgtt
       61 caggtagacg cagctcggca ggacccgctt ctggtccttc aggatcgact cgaccatggc
      121 gatcgccgcc gacgccgggg agaagaaggc ggagccggtc ttcaggaggg cgaccacttc
      181 gccgccggcc ttccgggtcc ggttcaccat cgcgtccatg gcctccttcg ccttggcggc
      241 gttgccgtat ttcttctcca gcagctccat gacagggatc ccggccacgg aggtaaaccg
      301 gatgaggggg accatgtcgt cgccgtgacc gcccagggtc atcgccgtca cgtcccggac
      361 ggagacgccg agctcccagg cgatgaaggc ggcgaaacgg gccgaatcga ggacgccggc
      421 ctgcccgatg atccggttgt aggggaatcc ggtgatcttc tggcagaggg tcaccatcgc
      481 gtcgagcggg ttggagatga cgatgatgaa ggagttcggg gcgtacgtct tgatcccctc
      541 ggcgacctgc gacatgatct tcgagttgac gccgatcagg tcgtcgcggc tcatcccggg
      601 cttgcggggg agccccgcgg tgacgatcac aacgtcggag ccggcgatgt ccgcgtagtt
      661 gttggtcccc ttcagggaga cgtcgaaacc ttccaccggg ccgacttccg cgatgtcgag
      721 gcatttcccc tggggcaatc cttcgacgat gtcgaacagc acgacgtcgc cgagttcgcg
      781 ttgggcgcac agctgtgcca gcacgccgcc aatttgaccg ccgccgatga gagcaatctt
      841 ctttcttgcc atcgctgcct ccttcgggat gtgaggttgg gtcgagctga aatcattgac
      901 cgggactata ccacaatcga aagtatactg tgtacaatag attccccctc ccgatatgcc
      961 cctacccccg gacgcctgtt tccgggaaca ggtggcggat cgagttcgcg tagtacagga
     1021 gcaggggaat ctcttccgga acgggcttgt acagtccgtc gttctccgac acgagtttcc
     1081 gaagtgtgag catccgcagc cccaccgtga cggcgtaatc ctggtccgcg cgcgggatgt
     1141 agatgtgcgc ccccgcgccg gacagttcct cgattacccg gagagcctcc gctttcagct
     1201 ccagctcgct gcagcacccg cctgggaagc gcaggagcgc cgtcgcgacc agggagacgg
     1261 ggaggaccgg gaccacccgc cccacggagc gcatcagcga cgccgcgagc tttcccacct
     1321 ccaggaaccg ctcttccctg gggagggtgc gcaggtcgat gccgcgttca cggctgtacg
     1381 cgcgcatcga tagaggcgac ccgaagttga cgcacgcgta cccgaatcgg taccagcgcc
     1441 cctgcagcat gaggagaagg ttccgcaaga ggaacttgag ggaggtggcg gcggcgaagc
     1501 cagcgccacg tcgcggtgcc tccgtcccga gcgcgagcac ctggctgcga tcctcgaggg
     1561 tccggtcgta gttgatcccc accgggatga agacgatgtc ccgacccccc atcgggtcga
     1621 acgcccgggt catgtagtcg agcagcccga gccggggcgt gcgcagcgcc ccgtcttt
//
LOCUS       DATGYW010000480         3206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_417936, whole genome shotgun sequence.
ACCESSION   DATGYW010000480 DATGYW010000000
VERSION     DATGYW010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3206
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417936"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1451
                     /gene="dnaK"
                     /locus_tag="VK429_06650"
     CDS             <1..1451
                     /gene="dnaK"
                     /locus_tag="VK429_06650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018047119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HLN91522.1"
                     /translation="DAGRIAGLEVLRIVNEPTAAALAYGLDKKKEGRIAVFDLGGGTF
                     DISILEVGDNVVEVKSTNGDTHLGGDNIDQRLIEWIIAEFRKDQGIDLSKDRTVLQRL
                     KEGAEKAKIELSSVMETEISLPFITADASGPKHLQLKLSRAKFEQMVQDILDRTLKPC
                     EMAVRDAGVPVGKIDEVVLVGGSTRIPKVVEMVKKFFGKDPHQGVNPDEVVAAGAAVQ
                     AGVLGGTVKDLLLLDVTPLSLGIETLGGVMTKLIERNTTIPVRKSEVFTTASDGQPSV
                     EIHVLQGEREMAGDNRTLGRFHLDGIPAAPRGVPQVEVTFDIDANGILHVNAKDKGTQ
                     KEQKITITASTGLNKDEIDNMVKQAESHAEEDRKRKAAIEARNHLDSLVYNTEKTLKE
                     HRDKVPAETAAKVEAALTEAKEALKSEDEAVLKAAAEKLIHESHALAEHMYKQASSAQ
                     GEGAAAGGSAPGEGKAPEGDVVDAEYEDPAKK"
     gene            1517..1969
                     /locus_tag="VK429_06655"
     CDS             1517..1969
                     /locus_tag="VK429_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015745303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HLN91523.1"
                     /translation="MAIVRFWDPMKELSSLQNRMNRVFEETFGSPLYRGEQPGVGTWS
                     PAVDIFETSDEIIVKAEVPGLAKDQIHVEVENGVLTLHGERKFEREVKEENYHRVERT
                     YGAFHRSFSLPGSVDAEKVRAEMKDGILEVRLGKREQAKPKQITVAVK"
     gene            2040..3023
                     /locus_tag="VK429_06660"
     CDS             2040..3023
                     /locus_tag="VK429_06660"
                     /inference="COORDINATES: protein motif:HMM:NF013705.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HLN91524.1"
                     /translation="MDPKKDYYRILGVPEGASAEEIRKAFRRLAKKHHPDVNPGDKAA
                     EARFKEANEAHEVLSDRKKREEYDAIRQGGFAGGFQGAGPFGAPGQASGGFRAESFDL
                     GDLFGDVFRGGGARFSHPGRGNDIRVELSVDFLDMVRGAVREIRYPRPRVCGQCGGTG
                     RAGRRGCPACYGRGVTESEERVKIRIPAGARDGATIRVPSKGEERAAPGESGDLQVEL
                     RMLAHPYFRREGNDILLEAPIRFSEAVKGARIEVPTIDGPVTLTIPPGSSSGRKLRLK
                     GRGVPTPGTAERGDQYVVLQVVVPSERPEEFLRLVDRIAGFEEKDPRGHWN"
BASE COUNT          612 a          942 c         1223 g          429 t
ORIGIN      
        1 aggacgccgg ccgcatcgcc ggcctcgagg tgctgcgcat cgtcaacgag ccgaccgcgg
       61 cggcgctggc gtacggcctc gacaagaaga aggagggccg gatcgcggtg ttcgacctcg
      121 gcggcggcac cttcgacatc tccatcctcg aggtggggga caacgtggtc gaggtgaagt
      181 cgacgaacgg agacacccac ctgggcgggg acaacatcga ccagcggctg atcgaatgga
      241 tcatcgccga gttcaggaag gaccagggga tcgacctgtc gaaggaccgc accgttctcc
      301 agcggctgaa ggagggggcg gagaaggcga agatcgagct ctcctccgtg atggagaccg
      361 agatcagcct gccgttcatc accgcggacg cgtcggggcc gaagcacctg cagctgaagc
      421 tgtcgcgggc gaagttcgag cagatggtcc aggacatcct cgaccgcacc ctgaagccgt
      481 gcgagatggc ggtgcgcgac gcgggcgtcc ccgtgggcaa gatcgacgag gtcgtcctcg
      541 tgggcggctc gacccgcatc ccgaaggtcg tggagatggt gaagaagttc ttcggcaagg
      601 acccgcacca gggcgtcaac cccgacgagg tcgtcgcggc gggcgcggcg gtgcaggcgg
      661 gcgtgctcgg cgggacggtg aaggacctgc tcctcctcga cgtgaccccg ctgtcgttgg
      721 ggatcgagac gctgggcggc gtgatgacga agctgatcga gcggaacacg acgatccccg
      781 tgcgcaagag cgaggtcttc acgaccgcct cggacggcca gccgagcgtg gagatccacg
      841 tcctccaggg ggagcgcgag atggccgggg acaaccggac gctcgggcgg ttccacctcg
      901 acgggatccc ggcggcgccg cgcggcgtcc cgcaggtcga ggtgaccttc gacatcgacg
      961 cgaacggcat tcttcacgtg aacgcgaagg acaaggggac gcagaaggag cagaagatca
     1021 cgatcaccgc gtcgaccgga ctcaacaagg acgagatcga caatatggtg aagcaggcgg
     1081 agtcgcacgc ggaggaggac cggaagcgga aagcggcgat cgaggcgcgc aaccacctcg
     1141 attcgctggt gtacaacacg gagaagacgc tgaaggagca ccgggacaag gtcccggcgg
     1201 agacggcggc caaggtggag gccgcgctca cggaggcgaa ggaggccttg aagtcggagg
     1261 acgaggccgt gctcaaggcc gcggccgaga agctgatcca cgagtcccac gccctcgcgg
     1321 agcacatgta caagcaggcg tcttccgcgc agggcgaggg ggcggccgcg gggggaagcg
     1381 ctcccgggga agggaaggct cccgaaggcg acgtcgtcga tgcggagtac gaggatcccg
     1441 cgaagaagta ggcgggttat aaaacaacgc gacccgtcac ggcggccatc cggcggcggg
     1501 ggagaggagg aggaccatgg cgatcgtgcg gttttgggac ccgatgaagg agttgtcgtc
     1561 gctgcagaac cggatgaacc gggtgttcga ggagaccttc gggtcgccgc tgtatcgcgg
     1621 cgagcagccg ggggtcggga cgtggtctcc cgccgtggac atcttcgaga ccagcgacga
     1681 gatcatcgtc aaggccgagg tcccgggcct tgcgaaggac cagattcacg tcgaggtcga
     1741 gaacggcgtg ctgacgctgc acggggagcg gaagttcgag cgggaggtga aggaggagaa
     1801 ctaccaccgg gtggagcgca cctacggcgc cttccaccgg tccttctcgc tgccgggctc
     1861 cgtggacgcc gaaaaggtcc gcgccgagat gaaggacggc atcctcgagg tgcgcctcgg
     1921 gaagcgggag caggcgaagc cgaagcagat caccgtcgcc gtgaagtgac gcggcgcatc
     1981 gatcgggtac ccccgggggg tcgccccggg ggtatccgcg acgccgccgg gagaggctga
     2041 tggacccgaa gaaggactat taccggatcc tgggggtccc ggaaggcgcc tcggcggagg
     2101 agatccggaa ggcgttccgg cggctggcga agaagcacca cccggacgtc aatcccggcg
     2161 acaaggcggc cgaggcgcgc ttcaaggagg cgaacgaggc ccacgaggtc ctgagcgacc
     2221 ggaagaagcg ggaggagtac gacgcgatcc gtcaaggagg attcgcgggc ggcttccagg
     2281 gtgccgggcc gttcggcgcc ccagggcaag cctccggggg gttccgggcg gagtcgttcg
     2341 acctcgggga tcttttcggg gacgtgtttc gcggcggcgg ggcgcgtttt tcgcaccccg
     2401 gccgggggaa cgacatccgg gtcgagcttt ccgtcgactt cctcgacatg gtccgggggg
     2461 cggtccgcga gatccggtat ccccggcccc gcgtgtgcgg gcagtgcgga ggaaccggac
     2521 gcgccgggcg acgggggtgc cccgcatgct acggacgcgg ggtgaccgaa tccgaggagc
     2581 gcgtcaagat ccggatcccc gcgggagcga gggacggcgc cacgatccgc gtcccttcga
     2641 agggggagga acgggcggcc ccgggggaga gtggtgacct gcaggtcgag ttgcgcatgc
     2701 tggcgcaccc gtacttccgc agggagggga acgacatcct tcttgaagcc ccgatccgct
     2761 tctcggaagc ggtcaagggg gccaggatcg aggtgccgac catcgacggc cccgttaccc
     2821 tgacgatccc ccccggctcc tccagcggca ggaagctgcg tctcaaggga aggggggttc
     2881 cgacccccgg cacggcggaa cggggggacc agtacgtcgt gctccaggtg gtcgtcccgt
     2941 cggaacggcc ggaggagttc ctccggctgg tggaccgcat cgccggattc gaggagaagg
     3001 atccccgggg gcattggaac tgaaacgtct ataatggaat caatatttgg tgagcctttg
     3061 acgggaacta agggagggat ggaggaaaca tggggaacac gctgaaaacg acgctcctgc
     3121 tggcggtcct cacggtcctg ttcgtgctcg tgggaaaggc gatcggggga cagtccggta
     3181 tggtaatcgc cttcgggctg gcgatc
//
LOCUS       DATGYW010000481         1990 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_347962, whole genome shotgun sequence.
ACCESSION   DATGYW010000481 DATGYW010000000
VERSION     DATGYW010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347962"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            309..1133
                     /locus_tag="VK429_06665"
     CDS             309..1133
                     /locus_tag="VK429_06665"
                     /inference="COORDINATES: protein motif:HMM:NF039473.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6502 family protein"
                     /protein_id="HLN91525.1"
                     /translation="MEENVTKAIAAAITNLLRPVVMFLLRNGVPYQTFADIAKRVYVD
                     LATEKFDIPGRKSSKSRVAILTGLSRREVLRVKRLPAQDDLGALDRINRAARVISGWV
                     VDRRFSDESGQPADIPFDGGTVSFQQLVKLYSGDAPARAVLDELMRVGVVERTPDGKI
                     HLLQRSYIPNAGEIDKIAMIGSDPSDLFSTIDHNICHPEAPFFQRKVNYDNLPSEALP
                     ELKKLAGEQSQALLERVDRWMSERDRDVNPQVAGTGRKRAVVGIYYFEEDYRGENE"
     gene            1172..>1990
                     /locus_tag="VK429_06670"
     CDS             1172..>1990
                     /locus_tag="VK429_06670"
                     /inference="COORDINATES: protein motif:HMM:NF039822.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5666 domain-containing protein"
                     /protein_id="HLN91526.1"
                     /translation="MLLLTLASFTFSACGGTGTDLAGGGSSGTGVSTGAITGYGSVFM
                     NGMEFFTDSQVAPGFVTMKTFMGMDNSSMMDRDLFHVGMVVTIHHGPNDNNAQQIEYQ
                     NNLQGRIAAKNSNTLTVLGQTVVVDDPAIFASLFLNEIVEVSGFVDSAGRIRASYIAM
                     VPCSMMMGMCTAGQFEVKGYVSGFSSSGFRLGPLPGGAGTTVAVSFAPAVGAGLADGM
                     YVQVVTIDPQPVSGSITATQINKLIPRTEFPNNAVTDLEGLVTATPSGSGSALSF"
BASE COUNT          428 a          563 c          590 g          409 t
ORIGIN      
        1 atcatgacca tccccccgtg atcggttcga ggtgcgccat gcacttcaga ccgatttgag
       61 atggggggaa gtttgatggg gaaagccgca cggaacgcaa acccggcaca aacggattat
      121 tgagggggtg gtggggaaac ctgtgggagt tcgagtccat ccttcggcat catatcaata
      181 actaaaggga atcctgattt tcgccgagtt ctgtttttcg taaaatgtcc ccgtgcattc
      241 cccccgtcga tccggctaaa gaaaataatt attgacaatg gcatatattt gggactatgg
      301 tcccaaatat ggaagagaac gtcacaaaag ccattgccgc agccatcacg aatctgctcc
      361 gccccgtggt gatgttcctc ctgcggaacg gcgttcccta ccagaccttc gccgatatcg
      421 ccaagcgcgt ctatgtggac ctggccacgg agaaattcga tatcccggga cggaaatcct
      481 ccaaatcgcg ggtagccatc ctcaccggcc tttcccggag agaagtattg cgcgtgaagc
      541 ggcttccggc ccaggacgat cttggggccc tggatcggat caaccgggcg gcgcgtgtca
      601 tttcgggctg ggtggtggac cgcaggttca gcgacgagtc gggacaaccg gcggatattc
      661 cgttcgacgg gggaaccgtt agctttcagc aactcgtcaa attgtatagc ggggatgcgc
      721 cggcccgcgc ggtgctcgat gaactgatga gggtcggcgt cgtcgagcgg acccccgacg
      781 ggaagattca cctgctccaa cgttcgtaca tcccgaatgc gggggaaatc gacaagattg
      841 ccatgatcgg cagcgaccct tcggaccttt tctcgacgat cgatcacaat atctgccatc
      901 cggaagcccc cttcttccag aggaaagtca attacgacaa cctcccttcc gaagcacttc
      961 ccgagctgaa gaaactggcg ggggaacaat cgcaggcgtt gctggaacgc gtggaccggt
     1021 ggatgagcga gcgggaccgg gacgtaaacc cccaagtagc cgggacgggc cgaaagcggg
     1081 cggtggtcgg gatctactac tttgaagagg actacagagg agaaaacgaa tgatgagtcc
     1141 cgcgagacga acctcccgac tcctgatcgg ggtgttattg ctgacgttgg cttcctttac
     1201 attttccgcc tgcgggggga ccggcactga tttagcgggc gggggaagca gcggaaccgg
     1261 cgtcagtacg ggggccatca ccggatacgg cagcgttttt atgaatggga tggaattctt
     1321 caccgacagc caggtggccc caggcttcgt cacgatgaaa acgttcatgg ggatggacaa
     1381 ttcctccatg atggacaggg acctgtttca cgtagggatg gtcgtgacca tccaccatgg
     1441 tcctaacgat aacaacgcgc agcagatcga ataccagaac aatctccagg ggcgcatcgc
     1501 cgccaagaat tccaataccc tcacggtcct cggacaaacc gtcgttgtag acgaccccgc
     1561 aatctttgcc tctctcttct tgaacgaaat tgtagaggtc agcgggttcg tggattccgc
     1621 cggccggatt cgcgcgtcct acatcgccat ggtgccctgc tccatgatga tggggatgtg
     1681 cactgccggc cagttcgagg tcaaggggta cgtttctggc ttttcttcct ccggtttccg
     1741 gctcggcccg ctgcccggtg gggcagggac gaccgtggcg gtttcgtttg ccccggcggt
     1801 gggtgcgggg ctggccgacg ggatgtacgt ccaggtcgtc accatcgatc cgcagccggt
     1861 atccggatcg atcaccgcca ctcagatcaa taaactcatc ccgcgaacgg aatttccaaa
     1921 taatgccgta accgacctcg aagggttggt caccgcgact ccgagcggtt ccggaagcgc
     1981 cctctccttc
//
LOCUS       DATGYW010000482         2998 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_188050, whole genome shotgun sequence.
ACCESSION   DATGYW010000482 DATGYW010000000
VERSION     DATGYW010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2998
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188050"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1334)
                     /locus_tag="VK429_06675"
     CDS             complement(<1..1334)
                     /locus_tag="VK429_06675"
                     /inference="COORDINATES: protein motif:HMM:NF015692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HLN91527.1"
                     /translation="MDSQTGTILSTLLKKRLKTLGYPSLRKFHADRPGIGLSYEVLRQ
                     VVYCGHLPRPETLFRILGSMQFSSSQVRKICGMHYGDYLPISSPVPDASLPSRAQAAA
                     GTQESPADPGASSPAGQSRQENEPSSAPPEEPGEILSRLRASLQRIPVSGNEDIWEMV
                     EALARIAEQKVRRSTGRQAEQPLLFAGEPEAIYQFLVRKNRISPFLSRGENLTLDFVE
                     GIDYRDRFRGALLGSAIGEALGGLTQGLTPRDVEELFGEFDALPVIASARRAAAPRDS
                     LLLSVARSLLPDGILDPGRTADAIARASRRDDPPGLSGFARNLLERGLPWHEAGENAA
                     ESMPAVLVLPIALLRAGNFRRLKLETGILASLTHIHPTAIAGAIAQACAVARILHTPA
                     STLDVISFSRALTPVVSGIEPERGARPRIGRSATTVGRKLGAELPALLLRRAP"
     gene            complement(1487..>2998)
                     /locus_tag="VK429_06680"
     CDS             complement(1487..>2998)
                     /locus_tag="VK429_06680"
                     /inference="COORDINATES: protein motif:HMM:NF024581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HLN91528.1"
                     /translation="LIETARIAATDPAIAPISFVSNALAPALFGEMPLPEILYVHKTL
                     WWTHLLIAFGFLASIPLTKMIHMGTGTASVFLRTSRPKGALQPIPNIEEEENPGVAAV
                     TDFSWKQLLSADGCTKCGRCQDECPAFAAEMPLSPRDVVLKTKDQLGLDLYGSLVPSA
                     TDVDKATGKRIVPDFVREVLHPEEIWACTTCRACMQACPVMIEHIDMIVDVRRGYVAA
                     SKVPDTVKTALRKMGDTGNPWGLPQDDRIAWAAGLDVPFAAEKKEFEYLYWVGCAGAY
                     DPRNQKVTRAIVSLLNRAGVSYATLGLEEMCCGESARRMGEEGLFQLGMVEMVKEVFA
                     GYKVKKVITQCPHCFNTFRNEYPQFGVDIEVLHHSVLLRDLISRGKLLPRNANNVALA
                     FHDSCYLGRHNDIYDAPREALAAIPGVTINEMKRNREEGFCCGAGGGGMWMESPGKRI
                     NHLRFGQAMATGANAVGSACPYCLMMFDDAIKFNNLDDSVKAKDIAELVAESL"
BASE COUNT          499 a          966 c         1003 g          530 t
ORIGIN      
        1 ggggcgcgcc gcaggaggag agcggggagc tccgcaccca gtttccttcc caccgtcgtg
       61 gccgatctcc cgatcctcgg ccgggccccc ctttcgggct cgattccgga gacgacgggg
      121 gtgagcgccc gggagaagga gatcacgtcg agggtggatg cgggagtgtg gaggattctc
      181 gcgaccgcgc atgcctgcgc gatcgccccc gcgatggccg tcgggtggat gtgcgtcagg
      241 gaggcgagaa tgcccgtctc cagcttgagc ctcctgaaat tcccggcacg gagcagcgca
      301 atggggagga cgagcactgc gggcatgctc tccgcggcgt tttcccctgc ctcatgccag
      361 gggagtccgc gctcgaggag gttgcgcgcg aaccccgaaa ggcccggtgg atcgtcccgg
      421 cggctcgcgc gggcgatcgc gtcggccgtc ctcccagggt cgaggattcc gtccggcagg
      481 agggacctgg cgaccgacaa caggagagag tcgcgcggcg ccgcggcacg gcgcgcggac
      541 gcgatgaccg gcagggcgtc gaactcaccg aacagttcct cgacgtccct gggtgtcaga
      601 ccctgcgtga ggccgccgag cgcttcgccg atcgcggagc ccagcagcgc gccgcggaag
      661 cggtcccgat agtcgatccc ctcgacgaaa tcgagcgtga ggttttcgcc gcgggagaga
      721 aacggggaga tccggttctt ccggacgagg aactggtaga tcgcctcggg ctccccggcg
      781 aacagcagcg gctgctccgc ctggcgaccg gtgctacggc ggaccttctg ctccgcgatt
      841 cgcgccagcg cctcgaccat ctcccatata tcctcgttgc cggaaaccgg gattctctgg
      901 agggaggcgc ggaggcggga gaggatctct cccggttcct ccggaggcgc tgacgacggc
      961 tcgttctcct gccgggactg cccggcagga gatgacgcgc ccggatccgc cggagattcc
     1021 tgggtcccgg cggctgcctg cgcgcgggag gggagggagg cgtcggggac gggggaagag
     1081 atcgggagat aatccccgta gtgcatcccg cagatctttc ggacctggct ggatgagaat
     1141 tgcatcgacc ccaggatcct gaacaaggtt tccggcctcg ggaggtgacc gcagtagacg
     1201 acctgtcgca gcacctcgta gctcaggcca atgccaggac gatcggcgtg gaacttccgg
     1261 agggagggat accctaaggt tttcaggcgt ttcttcagca gggtcgagag gatggtcccg
     1321 gtttgggagt ccatggccgc catcctcctt ttctcgcgat ttcctttatc tccagttccg
     1381 gcagttatta ttgcatgccg gcaggaaggg ttggaaaaga aaaaacggaa gttgccatat
     1441 gacagcttcc gttgtaatcc aggattccag cccgttcaac gccccgttat agcgactccg
     1501 ccaccagttc cgcgatgtct ttcgccttaa ccgaatcatc gaggttgttg aacttgatcg
     1561 cgtcgtcgaa catcatgagg cagtaggggc acgctgaacc gacggcgttc gcgccggtgg
     1621 ccatcgcctg cccgaagcga aggtggttga tccgctttcc aggggactcc atccacatcc
     1681 caccgcctcc ggcgccgcag cagaaccctt cctcgcgatt cctcttcatc tcgttgatcg
     1741 tgacgcccgg gatggcggca agggcctccc ggggggcgtc gtagatgtcg ttgtgcctgc
     1801 cgaggtagca cgagtcgtgg aatgcgagcg ccacgttgtt cgcattccgg gggaggagtt
     1861 ttccccggga gatcaggtcg cgcaaaagga cggagtggtg gaggacctcg atgtccaccc
     1921 cgaactgggg gtactcgttc cggaaggtgt tgaagcagtg ggggcactgc gtgatgacct
     1981 tcttcacctt gtatccggcg aacacctcct tcaccatctc gaccattccc agctggaaca
     2041 gcccttcctc ccccatccgg cgcgcggact ccccgcagca catctcctcg agcccgagag
     2101 tcgcgtaact caccccggcc cggttcagca gggagacgat ggcgcgggtg accttctggt
     2161 tgcgcgggtc gtacgccccc gcgcatccga cccagtacag gtactcgaac tccttcttct
     2221 ccgcggcaaa ggggacgtcc agccccgccg cccatgcgat ccggtcgtcc tggggcagcc
     2281 cccaagggtt cccggtatcg cccatcttcc gcagcgccgt cttcacggtg tcggggactt
     2341 tcgacgctgc cacgtaccct cgtcggacgt ccacgatcat gtcgatgtgc tcgatcatca
     2401 cggggcacgc ctgcatgcag gcgcggcagg tggtgcacgc ccagatctct tccgggtgga
     2461 ggacctcgcg gacgaaatcg gggacgatcc gtttccccgt ggccttgtcc acgtccgtcg
     2521 ccgacgggac gaggctcccg tagagatcca gccccagctg gtccttcgtc ttcaggacca
     2581 cgtcccgggg agacaggggc atctccgccg cgaacgccgg gcattcgtcc tggcaccggc
     2641 cgcacttggt gcacccgtcc gcggagagga gctgcttcca ggaaaaatcg gtgaccgcgg
     2701 cgacgccggg attctcctcc tcctcgatgt tcgggatcgg ctgaagagcc cccttcgggc
     2761 gggaagtccg caggaaaacg ctcgccgttc ccgtccccat gtggatcatc ttcgtcaggg
     2821 ggatcgaggc gaggaacccg aaggcgatca gcaggtgcgt ccaccagagc gtcttgtgca
     2881 cgtacaggat ctccgggagg ggcatctccc cgaagagggc cggcgcgagc gcgttgctga
     2941 cgaaggagat cggggcgatc gccggatcgg tcgcggcgat gcgggccgtc tcgatcag
//
LOCUS       DATGYW010000483         2086 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_312322, whole genome shotgun sequence.
ACCESSION   DATGYW010000483 DATGYW010000000
VERSION     DATGYW010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_312322"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            11..130
                     /locus_tag="VK429_06685"
     CDS             11..130
                     /locus_tag="VK429_06685"
                     /inference="COORDINATES: protein motif:HMM:NF023816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91529.1"
                     /translation="MKISDEVVVVSYGEKIAEDRPLAIQKNREVIRVYLGDDE"
     gene            174..911
                     /locus_tag="VK429_06690"
     CDS             174..911
                     /locus_tag="VK429_06690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015722823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN91530.1"
                     /translation="MLRIKNVESGYGRLKVLKKVTLHIGAGEIVTIIGANGAGKTSLL
                     RTVSGLIPARSGEILFDMKEIGKLPPERIVFLGCSLVPEGRQLFAPMTVKENILLGAY
                     PQFRRKRGDQARDDLERVYGLFPRLRERERQLAGTLSGGEQQMLAIARALMARPKLIM
                     MDEPSMGLAPLVIKDIFSIVTRLRREGNTVLLVEQNAKAALGIADRGYVLETGRIIME
                     GTAEDLLSNREVQRAYLGRDLDSEGTM"
     gene            928..>2086
                     /locus_tag="VK429_06695"
     CDS             928..>2086
                     /locus_tag="VK429_06695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020880855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase"
                     /protein_id="HLN91531.1"
                     /translation="MYWEPDKECMDREELEQLQLERLQSTLNRVYAHVPFYRKKFDAL
                     GISPEEIGSLSDLSRLPFTTREDVRGNYPYGLFAVPLREVVRIHASSGTTETSSVVGY
                     TRNDISMWSKLVARVLVAGGVTKDDVVQVSFRYGLFTGGFGLHYGAERLGASVIPASS
                     GNTARQIQIMKDFKTTALVSTPSYAMLVADTIREMGIPVSALSLKYGLFGGEPWSEKM
                     RMEIQDALGIVATDNYGLSEVIGPGVSGECLERNGLHINEDHFLVEVIDPKTLQPVPP
                     GQTGELVITTLTKEAFPMVRYRTRDLTSLQPGDCPCGRTGRRMSRLAGRTDEMLIIRG
                     MKVSPAKIESLLFEIEGSEPNYRIVIDRKGAMDEVTVLVEAAGEASYGQERR"
BASE COUNT          394 a          634 c          732 g          326 t
ORIGIN      
        1 gtcgctcgtc atgaagatct ccgacgaggt cgtcgtggtg agctacgggg agaagatcgc
       61 cgaggaccgt cccctcgcga tccagaagaa ccgggaggtg atccgggtgt acctggggga
      121 cgacgagtga aggggacaac ggcgggagcg ccggcttcgg gatcgaggga cgcatgctga
      181 ggatcaagaa cgtcgagtcc ggatacggca ggctgaaggt gctcaaaaag gtcacgttgc
      241 acatcggggc cggagagatc gtcacgatca tcggggcgaa cggcgccggg aagaccagcc
      301 tcctgaggac ggtctcggga ctgatcccgg cacggtcggg cgaaatcctc ttcgacatga
      361 aggagatcgg gaaattgccc ccggagagga tcgtcttcct cggctgctcg ctcgtgcccg
      421 agggacgcca gctcttcgct cccatgacgg tgaaggagaa catcctcctg ggcgcctacc
      481 cgcaattccg tagaaagcgc ggcgatcagg ccagggacga cctcgagcgc gtctacgggc
      541 tctttccccg cctcagggag cgcgagcggc agctcgccgg gacgctctcc ggaggcgaac
      601 agcagatgct cgcgatcgcg agggcgctca tggcccgccc gaagctgatc atgatggacg
      661 agccctcgat ggggctcgcg ccgctggtca tcaaggacat cttctcgatc gtcacgaggc
      721 tccggagaga gggcaacacg gttctgctcg tcgaacagaa cgcgaaggcc gccctgggca
      781 tcgcggaccg cgggtatgtt ctcgaaaccg gcaggattat catggaaggg acggcggaag
      841 acctgctctc gaaccgcgag gtgcaacggg cctaccttgg ccgggatctg gactcggaag
      901 gaacgatgta acggatcgga gggcggaatg tactgggaac cggacaagga gtgcatggat
      961 cgggaggagc tcgagcagct ccagctcgag cggctgcaat cgacgctcaa ccgcgtttac
     1021 gcgcacgtcc cgttctaccg gaagaagttc gacgcgctcg ggatctcccc ggaggagatc
     1081 gggtcgctct ccgacctctc ccggctgccg ttcacgacga gggaggacgt gaggggaaat
     1141 tacccctacg ggctgttcgc ggtcccgctt cgggaggtcg tccgcatcca tgcctcgtcc
     1201 ggcacgacgg agacgtcgtc ggtcgtgggc tacacgcgca acgacatctc gatgtggagc
     1261 aagctggtgg cccgcgtcct cgtcgccggc ggggtgacca aggacgacgt cgtccaggtc
     1321 tccttccggt acggcctgtt cacggggggg ttcgggctgc actacggcgc ggagcgtctc
     1381 ggcgcctcgg tgatcccggc gtccagcgga aacaccgcgc gccagatcca gatcatgaag
     1441 gacttcaaga cgacggcgct ggtgtccacc ccttcctacg cgatgctggt cgccgacacg
     1501 atccgcgaga tggggatccc cgtttcggcg ctctccctca agtacggcct cttcggaggg
     1561 gagccgtggt ccgagaagat gcgcatggag atccaggacg ccctcgggat cgtcgccacg
     1621 gacaattacg ggctttccga ggtcatcggg ccgggggtct cgggagagtg cctcgagcgc
     1681 aacggcctgc acatcaacga ggaccatttc ctcgtcgagg tcatcgaccc gaaaaccctt
     1741 caacccgtgc cgcccggcca gacgggggag ctcgtcatca cgacgctgac gaaggaggcg
     1801 ttcccgatgg tccggtaccg gacccgggat ctcaccagcc tccagccggg ggattgcccg
     1861 tgcgggcgga cggggcgcag gatgagccgg ctggcgggca ggacggacga gatgctgatc
     1921 atccgcggaa tgaaggtgtc ccccgccaag atcgagtccc tgctcttcga gatcgagggg
     1981 agtgagccga actaccggat cgtgatcgac cggaagggag cgatggacga ggtcacggtc
     2041 ctcgtcgagg ccgccgggga ggcgtcgtac gggcaggaac gccggc
//
LOCUS       DATGYW010000484         1856 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_138227, whole genome shotgun sequence.
ACCESSION   DATGYW010000484 DATGYW010000000
VERSION     DATGYW010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138227"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="VK429_06700"
     CDS             complement(<1..228)
                     /locus_tag="VK429_06700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91532.1"
                     /translation="MVRSVRFIHADVKAGTGLAVEAEGTDADGDPVQFEIAWQKNGEP
                     AGTGNRLATPLKRGDKVSVTVTPFDGKERGKS"
     gene            complement(459..1019)
                     /locus_tag="VK429_06705"
     CDS             complement(459..1019)
                     /locus_tag="VK429_06705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91533.1"
                     /translation="MKILRNEKGFALVFVMILAVIALVMTLAMLLMVSRGSYVSGQQK
                     RYRTALEASRGGAEAMMEAIAARGSILPAYPNLDQKASLVPKLVNGTNSWGTLDNTIT
                     INTATPATYDMTIDLGMYRVYVKVVDTVVGNTGLSTGLLKSGVVTTSPSEISGMAIPY
                     LYTIEVLSQSTTNPTERSKLSVLYQY"
     gene            complement(1021..>1856)
                     /locus_tag="VK429_06710"
     CDS             complement(1021..>1856)
                     /locus_tag="VK429_06710"
                     /inference="COORDINATES: protein motif:HMM:NF027400.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HLN91534.1"
                     /translation="PDPLKLNDSPNNPPKAVVSLDNANIPAGLTVNGSDYLVIKSTSV
                     GSGSAAGKWTTLQAWGGTRSWGSSEEDLDPNDRVIVLSPTLNHRTLVTPGTGILFSAA
                     ASYAPADNLTVTNIVYGVDSANLNFPWNRADYYIDNVLPTVVPQRCAPNTGVLVKRVV
                     SQADGTLATPLPLLDCVADMEVIYGRDTNGDKMVDVWVNDISALPADTIRTELAEVRV
                     HILAQEGQRDDTYTHPVNPILVGSPDLGTSFGRPFFIDNFRNYRWKVYTVVVKPRNLA
                     N"
BASE COUNT          362 a          563 c          533 g          398 t
ORIGIN      
        1 ggactttccc cgctccttgc cgtcgaacgg agtaaccgtc accgagacct tgtcgccccg
       61 tttcagagga gtcgcaagac gattcccggt gcccgcgggt tcgccgttct tctgccacgc
      121 gatctcgaac tgcacggggt ctccgtcggc gtcggtgcct tccgcttcca cagcgagccc
      181 ggtcccagcc tttacgtcgg cgtggatgaa ccggacactc cggaccaccg ggggagagtt
      241 ccggtccacg gcgcccggtg cacgcgcggg ctcccctgca accaccgatc ccccgccctg
      301 ttgcccggtc ggcgtggcga ttacattccc tgcggatgaa gttgcaggca tgggcggcgg
      361 cgccggagca ggggccttcc ggtcgcctga gcatccggca ggcaggagca gggcgatcag
      421 caggataagg gcatattggg aaaccatcgg catgggtctc aatattgata gaggacggaa
      481 agcttcgagc gttcggtggg gttcgtcgtg ctctgcgaga gcacctcgat cgtgtacagg
      541 tatggaatcg ccatcccgga tatttcgctt gggctggtcg taacaacgcc cgatttcaac
      601 aaccccgtgc tcaggccggt gtttccaacc accgtgtcga caaccttcac gtatacgcgg
      661 tacattccca agtcgatcgt catgtcataa gttgcggggg tagccgtgtt gattgtgatc
      721 gtattgtcca gggtacccca cgaattcgta ccattaacga gtttcggcac caaagaggct
      781 ttctggtcca gattggggta agccgggaga atgctcccac gagctgcgat tgcttccatc
      841 atcgcttccg cgccgccacg gctcgcctcg agggcggtgc ggtaccgttt ctgctgaccc
      901 gatacatagg agccgcgcga taccattaac agcatcgcca acgtcatcac gagcgcgatc
      961 acggcgagga tcatgacgaa gaccaacgcg aacccttttt cgttccgcag gattttcatg
     1021 tcaattcgcc aggttccttg gtttgacaac gaccgtgtag accttccagc ggtagtttcg
     1081 gaaattatcg atgaagaagg gccttccaaa actcgtccct aaatctggcg atccgacaag
     1141 gatcggattt accggatggg tgtaggtatc gtcccgctgc ccttcctgcg cgagaatatg
     1201 gactcgaacc tccgccaact ccgtgcgaat cgtatccgcg gggagcgcag agatgtcgtt
     1261 aacccaaaca tccaccatct tgtccccatt ggtatcgcgc ccgtagatca cctccatgtc
     1321 ggcgacgcag tcgagcaatg gaaggggcgt agcaagagtc ccgtccgctt ggctcacaac
     1381 ccgcttcacc aggacgccgg tgttcggggc gcaacgttga ggcaccactg tcggcagcac
     1441 attatcgatg tagtagtccg cccggttcca ggggaaattc aagttcgcgc tatcgacccc
     1501 gtagacgata ttcgttacgg tcagattatc ggcaggagca taactcgccg ctgccgagaa
     1561 aagtatcccc gtccccggcg tgacaagcgt ccgatggttg agggtcgggg agagcacgat
     1621 gacacgatca ttcggatcaa ggtcctcctc agacgacccc caacttcgtg tgccccccca
     1681 cgcctggagg gtcgtccatt ttcctgccgc gcttcccgat cctacgcttg tcgatttgat
     1741 gactagatag tcggatccat tcaccgtgag ccccgccgga atgtttgcgt tatcaagact
     1801 tactacagcc ttcgggggat tgttcgggga atcgttcagt ttcagcgggt cgggct
//
LOCUS       DATGYW010000485         2778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_418391, whole genome shotgun sequence.
ACCESSION   DATGYW010000485 DATGYW010000000
VERSION     DATGYW010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418391"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..988
                     /locus_tag="VK429_06715"
     CDS             <1..988
                     /locus_tag="VK429_06715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HLN91535.1"
                     /translation="IDAGLPLVQCLDILGQQQENPTFKKVILKIKEDVESGSTFADAL
                     SKHPTVFDSLFVNLVAAGEVGGMLDTILSRLADYIEKSMKLAKKIKGAMVYPSTILAV
                     AVIVTVVLLVYVIPIFAKMFADFGQGLPGPTQFVLALSDFTRKYFLLVVVFIFLLVAA
                     FRWYYRQETGRRNVDRLLLRLPVVGSLLQRIAVARFSRTLGTMVSSGVPILESMDIVA
                     KTAGNKIIEEAIVKARMSISEGKTIAEPLAESKVFPPMVTQMVAVGEATGALDAMLTK
                     IADFYDDEVDAAVEAMTALLEPMLMVFLGVVIGGLVIAMYLPVFKLAGAVGG"
     gene            993..2678
                     /locus_tag="VK429_06720"
     CDS             993..2678
                     /locus_tag="VK429_06720"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN91536.1"
                     /translation="MARDPGGGAEGTRAGGRNLLLIRTGITFALLASVVSVQVRSPEL
                     LLTGGFQLLYFAVLLSYGWLLLRYAAWGSVDLPLYAVFLQAVADVAFISIVVFATGLY
                     DSVFSFMFVVVILLGSLERYLRGAVGWALLSSAAYTVLVYLQMRGILLPPGFEATSIP
                     FPQFARSAVTHSTAFLLTGVLSGLLGEEIRKGKEKVRDRDDVIQKLESFHKHVIDNIP
                     SGLLTIDTKGRVNLVNDTACAILGRTREDTVGKPMGQVLAGIEGWEEREGRDDSRIPR
                     AEIRFLRADGTELFLGFSTSPMKDAEGHAIGRVVIFQDLTPIRQMEERVRIADRLAGV
                     GELAAGLAHEIRNPLASIAGSSQLLRESAASSGESATLLDIIGRESQRLNGLITDFLA
                     YTGPSQRDTMRLDVAALLRDVAEAVRAGEARGKGVAVELATLPALVVEGDGEQLKQVA
                     WNLVRNAVQAAPAGGKVMIDGFEQIRHGSRYVVAMVVDTGAGIAPGILEKIFNPFFTT
                     KEGGTGLGLSISQRIVHQHKGFIEVRQAPGKGCAFSVFLPAASARSGEGIGDG"
     gene            2671..>2778
                     /locus_tag="VK429_06725"
     CDS             2671..>2778
                     /locus_tag="VK429_06725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009661230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLN91537.1"
                     /translation="MADRSVTVVGAGLAGSEAALRLSRAGLAVDLYEMRP"
BASE COUNT          435 a          889 c          946 g          508 t
ORIGIN      
        1 gatcgacgcg ggtctccccc ttgtccagtg cctcgacatc ctcgggcagc agcaggagaa
       61 cccgacgttc aagaaggtga tcctgaagat caaggaggac gtggagagcg gctccacttt
      121 cgccgacgcc ctttccaagc acccgacggt cttcgattcc cttttcgtca acctcgtcgc
      181 cgcgggagag gtgggcggga tgctcgacac gatcctgtcg cgtctcgcgg attacatcga
      241 gaagtcgatg aagctcgcca agaagatcaa gggggcgatg gtctacccgt cgacgatcct
      301 cgccgttgcc gtcatcgtca cggtcgtcct gctcgtgtac gtcatcccga tcttcgcgaa
      361 gatgttcgcc gatttcggcc aggggctccc cggtcccacc cagttcgtcc tcgcgctcag
      421 cgacttcacg cgcaaatatt tcctgctcgt cgtcgtcttc atcttcctgc tcgtcgcggc
      481 gttccgctgg tactaccggc aggaaaccgg tcgaaggaac gtcgaccggc ttctgctgcg
      541 gctcccggtc gtcggctccc tgctgcagcg gatcgcggtc gcgcggttct cgcggaccct
      601 cgggacgatg gtcagcagcg gcgtccccat cctcgagagc atggacatcg tggcgaaaac
      661 cgcggggaac aagatcatcg aggaggcgat cgtcaaggcc cgcatgagca tcagcgaggg
      721 gaagacgatc gcggaaccgc tggccgagag caaggtgttc ccgccgatgg tgacccagat
      781 ggtcgccgtg ggcgaggcca cgggcgccct cgacgcgatg ctgaccaaga tcgccgactt
      841 ctacgacgac gaggtcgacg cggccgtcga ggcgatgacg gcgctcctcg agccgatgct
      901 gatggtcttc cttggcgtgg tgatcggcgg actggtcatc gcgatgtacc tgccggtgtt
      961 caagctggcg ggagccgtcg ggggataatc gattggcccg tgaccccggg gggggagccg
     1021 aggggacgcg ggcggggggg agaaaccttc tcctgatccg taccgggatc acgttcgccc
     1081 tgctggcgtc cgtggtttcg gtgcaggtcc gctcgccgga gctgctgctc acgggtgggt
     1141 tccagcttct ctacttcgcc gtccttctct cctacgggtg gctgcttctc aggtacgccg
     1201 cctggggaag cgtcgacctc ccgctgtacg ccgtcttcct tcaggcggtc gcggacgtcg
     1261 ccttcatctc catcgtcgtc ttcgcgaccg gcctgtacga cagcgtcttc tccttcatgt
     1321 tcgttgtcgt gatcctgctc gggagcctcg agcggtacct tcgcggggcg gtgggatggg
     1381 cgctcctttc ctccgctgcg tacaccgtcc tcgtctacct gcagatgcgc gggattctcc
     1441 tgccgcccgg tttcgaggcg acgtccatcc cgtttcccca gttcgcccgt tccgcggtga
     1501 cgcactccac ggcgttcctc ctcacggggg tcctttccgg actcctcggc gaggagatcc
     1561 ggaaggggaa ggagaaggtc cgcgaccgtg acgacgtgat ccagaaactg gagagcttcc
     1621 acaagcacgt gatcgacaac atcccgtccg gcctcctcac gatcgacacg aagggaaggg
     1681 tgaacctggt gaacgacacg gcgtgcgcca ttctcggcag gacacgggag gatacggtcg
     1741 ggaagccgat ggggcaggtc ctcgcgggga tcgaggggtg ggaggagagg gagggcaggg
     1801 acgattcccg gattccccgc gcggagatcc ggtttctgcg ggccgacggc acggaactct
     1861 ttctcggctt ctcgacctct ccgatgaagg acgccgaggg gcacgcgatc ggccgcgtgg
     1921 tgatcttcca ggacctgacc cccatccggc agatggagga acgcgtccgg atcgcggatc
     1981 gcctggccgg ggtgggggag ctcgccgcag gtcttgcgca cgagatccgg aatcccctcg
     2041 catcgatcgc cggatcttcc cagctgctcc gggagtcggc ggcctcctcc ggcgaatctg
     2101 cgaccctcct cgacatcatc gggagggaaa gccagcggtt gaacggcctc atcaccgatt
     2161 tcctcgccta taccggccct tctcaaaggg acacgatgcg cctcgacgtg gcggcgctgc
     2221 tccgggacgt cgccgaggcg gtccgcgcgg gggaggcccg ggggaaaggc gtggcggtcg
     2281 aactcgccac tcttccggcg ctcgtggtgg agggggacgg ggagcagctg aagcaggtgg
     2341 cgtggaacct cgtccgcaac gcagtgcagg ccgccccggc ggggggaaag gtgatgatcg
     2401 acggcttcga gcagatccgc cacgggtcca ggtatgtcgt cgcgatggtg gtcgacaccg
     2461 gggccgggat cgccccgggg atcctcgaaa agatcttcaa cccgttcttc acgaccaagg
     2521 aaggggggac ggggctaggt ctctccatct cccagaggat cgtccaccag cacaagggat
     2581 tcatcgaggt tcgccaggcg ccaggcaagg gatgcgcctt ctcggtgttc ctcccggcgg
     2641 cctcggcgag aagcggggag gggatcggcg atggctgacc gctccgtgac ggtcgtgggc
     2701 gcgggtctcg ccggttcgga ggcggccctg cgtctgtcgc gcgccggcct cgcggtcgac
     2761 ctgtacgaga tgcgtccc
//
LOCUS       DATGYW010000486         1584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_510394, whole genome shotgun sequence.
ACCESSION   DATGYW010000486 DATGYW010000000
VERSION     DATGYW010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_510394"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..625
                     /locus_tag="VK429_06730"
     CDS             <1..625
                     /locus_tag="VK429_06730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91538.1"
                     /translation="SEMASQRYAVRIVPGATFDISAGYESYTYKGLFQSTLNPAFVYP
                     SVDNNDEVQTIFGIVDWAFVPGWTLEVAGKNIRHDKSDPGDANRGEVGVRYTYNEKKD
                     VAGFSAAFVSADQAKNEYQEYRGFASYSPSKLRVTLDALTQRYKEEINGKKNQYQVVA
                     TAGYQVLASLQLSGNLTYTQSPNFQEDWAGLVRLNYDFATTTTGGKK"
     gene            622..1092
                     /locus_tag="VK429_06735"
     CDS             622..1092
                     /locus_tag="VK429_06735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HLN91539.1"
                     /translation="MTRRMPFPAVFGAVLIALLFGCSAVSQTPSVPPKHPEDLPQGRV
                     DCLECHQDVSTGALKPYAMVRHSRVFIDTHGTYARQGQNLCASCHAPAFCQTCHARKE
                     EMKPDTKMGDRPDRRAPHRGDYLVTHRMDGRLDPGSCFRCHGNKSDARCKQCHQ"
     gene            1154..>1584
                     /locus_tag="VK429_06740"
     CDS             1154..>1584
                     /locus_tag="VK429_06740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91540.1"
                     /translation="MLILLAALAVGAGCSTAESPGGSSTNMNHVLPSGSSVDGWLVTP
                     SGGTHASTATQDYLANNGSIGCTQCHGSDLTGGISGVSCFGNPIGCHHDPVANWVTPA
                     VHGATAKKAPGSSGFASCQICHGKSFSGGGAKVPCFTCHEV"
BASE COUNT          294 a          527 c          510 g          253 t
ORIGIN      
        1 cagcgagatg gcctcgcagc ggtatgcggt ccggatcgtg cccggcgcga ccttcgacat
       61 ctccgcgggc tacgaatcgt atacgtacaa ggggctgttc cagtccacgc tgaacccggc
      121 gttcgtgtac ccttcggtgg acaacaacga cgaggtccag acgatcttcg gcatcgtgga
      181 ttgggcattc gttcccggct ggaccctgga ggtggcgggg aagaacatcc ggcacgacaa
      241 gtcggatccc ggggacgcta accgcggaga ggtcggggtg cgctacacgt acaacgaaaa
      301 gaaagacgtc gcggggttct ccgccgcctt cgtatccgcc gaccaggcga agaacgagta
      361 ccaggaatat cgcggcttcg cctcctactc gccctccaag ctccgggtga ccctggacgc
      421 cctcacccag cggtacaagg aggagatcaa cgggaagaag aaccagtacc aggtggtcgc
      481 cacggccggg taccaagtcc tcgcctcctt gcagctttcc ggaaacctga cgtatacgca
      541 aagccccaac ttccaggaag actgggcggg gttggtccgg ttgaactacg atttcgcgac
      601 gacgaccacg ggaggaaaga aatgacccgt cgcatgcctt tcccagccgt tttcggggcg
      661 gtcctgatcg ccctgctctt cgggtgttcc gcggtctcgc agaccccgtc ggtgccgccg
      721 aagcaccccg aggatctgcc gcaggggcgg gtcgactgcc tcgagtgcca ccaggacgtc
      781 tccaccgggg ccctcaagcc gtacgccatg gtccgccact cccgcgtctt catcgatacc
      841 cacggcacgt acgcgcggca ggggcagaac ctgtgcgcct cgtgccatgc cccggcgttc
      901 tgccagacgt gccacgcccg gaaggaagag atgaagcccg acacgaagat gggcgatcgc
      961 ccggaccgca gggcgccgca ccggggcgac tacctggtca cccatcggat ggacgggcgc
     1021 ctcgaccccg gctcctgctt ccggtgccac gggaacaaga gcgacgcgcg ctgcaagcag
     1081 tgccaccagt agaacgggag gggacatgat ttcgaggacg cgttctttcc gggaaccctg
     1141 gaaaccgatc ggggtgctga tccttctggc agcgttagcg gtgggcgccg gttgctccac
     1201 cgcagaatcc cccggcgggt ccagcacgaa catgaaccac gttctcccgt ccggcagttc
     1261 cgtcgacggg tggttggtca ccccttccgg cgggacgcat gcgagcaccg cgacgcagga
     1321 ctacctcgcc aacaacggga gcatcggctg cacgcagtgc cacggttcgg atctgacagg
     1381 ggggatctcc ggggtctcct gcttcggcaa cccgatcggg tgccaccacg atccggtcgc
     1441 gaactgggtc accccggcgg tacacggggc gaccgccaag aaggcccctg gcagttccgg
     1501 gttcgcctcc tgccagatct gtcacgggaa gagcttctcc ggaggcgggg cgaaggttcc
     1561 ctgcttcacc tgccacgagg tgag
//
LOCUS       DATGYW010000487         4144 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_188937, whole genome shotgun sequence.
ACCESSION   DATGYW010000487 DATGYW010000000
VERSION     DATGYW010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4144
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188937"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..224
                     /locus_tag="VK429_06745"
     CDS             <1..224
                     /locus_tag="VK429_06745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="fibronectin/fibrinogen-binding protein"
                     /protein_id="HLN91541.1"
                     /translation="GIPGSHVLVKRIAGKEVPREVIEEAARLAVLHSRAKGSRNVPVF
                     LAEARHVSKFKGAKPGLVRITKYSTVSVR"
     gene            complement(301..1206)
                     /locus_tag="VK429_06750"
     CDS             complement(301..1206)
                     /locus_tag="VK429_06750"
                     /inference="COORDINATES: protein motif:HMM:NF016131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HLN91542.1"
                     /translation="MTGTKTGGTIGESMRGDPEDPLGRRLGALVRQWPDLARAAEVYR
                     VTLPLLRNVRPIAAPIPLTEDQARRKLAEGHYLLHGVTLVFDQGGARGLMLGLARNLE
                     EAGLVAVSPIRSALEGDRLDLEELLGHVAEGNYPSLAALAKQLALHPPLLWTLAQSAL
                     KPTLRAWCGEFAPLVHTAGEWEKACCFICGALASLGELQGNEQGKHLRCGQCGADWKI
                     PRLQCIYCGNEDTSLLGILSPEGRRENVRVEMCDKCHGYLKVIPRFAPCSPEELAVED
                     LSTLYLDCLAQERGYRRPPPRQEEP"
     gene            complement(1203..2117)
                     /gene="nrfD"
                     /locus_tag="VK429_06755"
     CDS             complement(1203..2117)
                     /gene="nrfD"
                     /locus_tag="VK429_06755"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HLN91543.1"
                     /translation="MSPEVHIPGWDWYYVAMYFFIGGVSAGAYFIGTLAELFGGERHR
                     EISRTGFYIAFPLILLTPPLLIADLGRPARFWHLLFHAKSGFPYINLQSPLSVGSWAL
                     LLFGGMAFLSFLDNLVSEGKLQSAPFVKAYSRIPRKWYAIVGSIAGFFVAGYTGVILN
                     VTARPFWAATDPLVGALFVASGASTGAAAIYLVMTWRKQLADPGLPGFDLFDRLAKLL
                     ELFLAVAMVVLAGKYAAPLMKGFTAVMFWGGAVLLGTLLPLVAGWYVTRTAESRIPAE
                     RLAAVLAVLVLVGGALLRISMVHAGQVQ"
     gene            complement(2114..2935)
                     /locus_tag="VK429_06760"
     CDS             complement(2114..2935)
                     /locus_tag="VK429_06760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007504961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HLN91544.1"
                     /translation="MPKGMFVDTSICTGCKACQVACKEWNALPHEPGHFRFDPVEKRP
                     VAVNFTGDSYDNTGALGATDWRHVRFIEQFSEDRSRARWFFSSDSCKHCNDAGCLNAC
                     PTGAIVRTDLGNVFIRQDVCIGCKYCIPSCPYGVISLSEVTGTVHKCTLCNDRIHNGL
                     GTACAKACPTGSISYGEVAELRSAADKRLVQLKGLGYGEANIYGYKEAGGLNVFYLFL
                     DRPQVYGQQEAVVAPQHRLPISSAVTIAGALALGGAALVSFRERGSREKDEEVKK"
     gene            complement(2936..>4144)
                     /locus_tag="VK429_06765"
     CDS             complement(2936..>4144)
                     /locus_tag="VK429_06765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012873823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HLN91545.1"
                     /translation="RSDSWFSFLLGKRLKELYKDSTNDRDWAIRNLLWNYEPEAAEAA
                     EWRIKDEPSAYKLLKEINGFTWEDRKPLSTFANLKEDGSTACGAWIYTGVIPEEGKNR
                     GKSRKGDDWISPNWGFAWPANRHIMYNRASADASGKPWSEKKKLVYWDPAADSGTKDP
                     AGKPVPGKWVAPSGEGIDFQPTKPPGFRGKDNGLGFDWLSGSDAFIMRSDGKAWLFAP
                     AGLVDGPLPAHYEPYESPVKNLLYRQQSNPVAKVWNVEGNPYHKVADPSFPIVLSTYR
                     LTEHHLTGAMSRWLPWLAELMPELFCEISPELAAERKVRNGEYVTIRTARGEVEARAL
                     VTRRMRPFLVDGKTVHEIGLPWHWGWQGTAQGDVVNNLTPLVGDPNVSIHEGKVFTCD
                     LRAGKKGGRA"
BASE COUNT          726 a         1355 c         1351 g          712 t
ORIGIN      
        1 aggggatccc gggaagccat gtactggtga agcgcatcgc cggaaaagag gtcccccgtg
       61 aagtgatcga agaggcggca cggctggcgg ttctccacag cagggcaaag gggtcccgga
      121 acgtcccggt cttcctcgcg gaggcccggc acgtctccaa gttcaagggg gcaaaaccgg
      181 gactggtccg cattacgaaa tactccaccg tctccgtgcg ataagtctaa aaccagcgcc
      241 cgttcattta gttaaccgga tattcctgtt ccattgacaa ggcgacggcc ccggccgcgg
      301 tcaaggctcc tcctgccggg gcggcgggcg acggtagcct cgctcttgcg cgaggcaatc
      361 caggtaaagg gtggagaggt cctcgaccgc cagttcttcg ggagaacagg gggcaaagcg
      421 gggaatcacc ttgagatagc cgtggcactt gtcgcacatc tccacccgga cgttctcgcg
      481 ccggccttcc ggggaaagga tgccgagcag ggaggtgtcc tcgttgccgc agtaaatgca
      541 ctgtagccga gggatcttcc agtccgcgcc gcactgcccg cagcgcaggt gcttgccctg
      601 ctcgttgcct tgaagctcgc caagagaggc gagagcaccg cagatgaaac agcaggcctt
      661 ctcccactcc cctgcggtgt ggacgagagg cgcgaattcc ccgcaccagg cccggagggt
      721 gggcttgagc gcggattggg ccagcgtcca caggaggggg ggatgcagcg ccagctgttt
      781 cgctagggcg gcgagggacg ggtaattccc ctccgccacg tgcccgagca gttcctcgag
      841 gtccaaccgg tctccctcca gcgcggaccg gatcggggag acggcaacca gtcccgcctc
      901 ttccaggttc cgcgccaagc caagcatcag tccgcgagct ccaccttgat cgaagaccag
      961 ggtgacgccg tggaggagat agtgcccctc cgccaatttc cttcgcgcct gatcctccgt
     1021 cagcgggatc ggcgctgcga tcgggcggac atttctgagg agagggaggg tgacccggta
     1081 tacctcggcg gcccgcgcga gatccggcca ttggcggaca agggcaccca gccgccgtcc
     1141 cagcggatct tccggatccc cccgcatcga ctccccgatg gtcccgccgg ttttcgtccc
     1201 ggtcactgca cctgcccggc gtggaccatg ctgatgcgta gaagggcgcc gcccacgagc
     1261 acgaggacgg cgaggaccgc cgccaaccgt tccgccggta ttcgactctc ggcggttcgg
     1321 gtcacatacc agcccgccac cagcgggagc aatgtgccca gcagcacggc accgccccag
     1381 aacatcacgg cggtgaatcc cttcatgagg ggagcggcgt actttccggc caggacgacc
     1441 atggcgaccg ccaggaaaag ttcgaggagc tttgcgaggc gatcgaacag gtcgaacccg
     1501 gggagcccgg ggtcggcgag ttgcttccgc caggtcatca ccaggtagat ggccgccgcc
     1561 ccggtcgagg ccccggacgc gacgaagagc gcgccgacca ggggatcggt ggccgcccag
     1621 aacgggcgag ccgtcacgtt caagatcacg ccggtgtacc cggcgacgaa gaagccggcg
     1681 atggagccca caatcgcata ccatttccta gggatgcggc tgtatgcttt tacgaacggc
     1741 gcgctttgaa gcttcccttc ggacaccagg ttgtcgagga aggaaagaaa tgccatcccc
     1801 ccgaagagga ggagcgccca ggaaccgacg gagagggggg attgcaggtt gatgtaggga
     1861 aagccgcttt tcgcgtggaa gagcaggtgc cagaaccgcg ccggccgacc gagatcggcg
     1921 atcaggagcg gcggggtcag caggatcagc gggaatgcga tatagaatcc ggtgcggctg
     1981 atctcgcggt gcctctcgcc gccgaacagc tccgccagcg tgccgatgaa ataggccccc
     2041 gccgacacgc ctccgatgaa gaagtacatc gcgacgtagt accaatccca tcccggtatg
     2101 tggacttcgg ggctcatttc ttcacctcct cgtccttctc cctggatccg cgttcccgga
     2161 agctcaccag cgcggcgcct ccgagggcaa gcgcgccggc gatcgtcacc gccgatgaga
     2221 tcggaaggcg atgctgcggc gccaccaccg cttcctgctg gccgtacacc tgcgggcgat
     2281 ccaggaaaag gtagaacacg ttcaggccgc cggcctcctt gtacccgtag atgttcgcct
     2341 cgccgtagcc cagacctttg agttggacta gacgcttgtc ggcggcgctc ctgagttcgg
     2401 cgacctctcc gtaggagatc gaccccgtcg ggcacgcctt cgcgcaggcg gtccccagcc
     2461 cgttgtggat gcggtcgttg cacagcgtgc acttgtggac ggtgcccgta acttcgctca
     2521 gcgagatcac gccgtagggg caggaaggaa tgcagtactt gcagccgatg cagacgtcct
     2581 gccggatgaa gacgttcccc aggtcggtcc ggacgatggc gccggtgggg caggcgttca
     2641 ggcagccggc gtcgttgcaa tgcttgcacg aatcgctcga aaaaaaccat cgcgcgcggg
     2701 agcggtcctc gctgaactgc tcgatgaagc ggacgtgccg ccagtcggtg gcacccaacg
     2761 cgccggtgtt gtcgtaggag tcgccggtga agttgacggc gaccggacgc ttctccacgg
     2821 gatcgaaccg gaaatggccg ggttcgtggg gaagggcgtt ccattccttg cacgccacct
     2881 ggcatgcctt gcaaccggtg cagatggagg tgtcgacgaa catccctttc ggcatttagg
     2941 cccgacctcc tttcttcccc gcgcggaggt cgcaggtgaa aaccttcccc tcgtggatcg
     3001 agacgttggg gtcccccacc aggggggtca ggttgttcac cacgtctccc tgggcggtgc
     3061 cctgccagcc ccagtgccac ggcaggccga tttcgtggac ggttttcccg tcgacgagga
     3121 agggccgcat ccgccgtgtg acgagcgccc tggcctcgac ctccccccgg gccgtccgga
     3181 tcgtgacgta ctccccgttc ctgaccttcc gttcggccgc cagctccggg gagatctcgc
     3241 agaagagctc gggcatcagc tccgccagcc aggggagcca gcggctcatc gccccggtga
     3301 ggtgatgctc ggtgagccgg taggtggaga ggacgatcgg gaaggaagga tcggcgacct
     3361 tgtgatacgg gttcccctcc acgttccaca ccttcgccac ggggttggac tgctgccggt
     3421 agagaaggtt tttcaccggg gattcgtacg gctcgtaatg agccgggagc gggccgtcca
     3481 ccagccccgc cggcgcgaac agccacgcct tgccgtccga ccgcatgatg aaggcgtcgc
     3541 tgccgctcaa ccagtcgaag cccagcccgt tatcctttcc ccggaatccc gggggcttcg
     3601 tgggctggaa gtcgatcccc tcgccggagg gggccaccca cttgcccgga accggtttgc
     3661 ccgcgggatc cttcgtcccg ctgtcggccg cggggtccca gtacaccagc ttcttcttct
     3721 cggaccacgg cttgcccgag gcatcggcgg aggcgcggtt gtacatgatg tggcggttcg
     3781 ccggccaggc gaacccccag ttcggggaga tccagtcgtc ccccttgcgg gacttcccac
     3841 ggttcttccc ttcctcgggg atcaccccgg tatagatcca ggcgccgcag gccgtggagc
     3901 cgtcctcttt caggttggcg aacgtggaaa gcggcttcct gtcctcccag gtgaagccgt
     3961 tgatctcctt caggagcttg taggccgaag gctcgtcctt gatccgccac tccgccgctt
     4021 ccgcagcctc cggctcgtag ttccataaga ggttccggat cgcccagtcg cggtcgttcg
     4081 tcgaatcctt gtacagctcc ttgagccgct tgcccaggag gaagctgaac caggagtcgc
     4141 tgcg
//
LOCUS       DATGYW010000488         4758 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_312568, whole genome shotgun sequence.
ACCESSION   DATGYW010000488 DATGYW010000000
VERSION     DATGYW010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4758)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4758)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4758
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_312568"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1891)
                     /locus_tag="VK429_06770"
     CDS             complement(<1..1891)
                     /locus_tag="VK429_06770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013292189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HLN91546.1"
                     /translation="MSYIEALLNSRFIGWIFRHRFIKFGTVGGSGVLINLGVLYLGQE
                     YLFTAIESPSMRLNVSLGLAILCATGNNFTWNRLWTWEDRRHGSDKPLLLQFGQYTLA
                     CLFGILLQLAFTKILAAHVHYLLANFTAILAAGIFNYLVNDAWTFGLGKLLSIPTREN
                     RPLRIWFCIVTGIAVFTYFFGLDSQHIPKNGDEYPYTNITRVTAESGALLPLQSTMEH
                     MRNTKPPMLFWQGIASTHWGQRWTLWNLRYPSVLYTLLTATMVFLLARKLSGRPEAGF
                     LAMSTFLAFFSTYRYGRPFLTNPPEVFWLFLPFFALLYWRPASFSSRFVFPVVSGVAV
                     GVCLLYKSFALAIPAGLGLAAGFWQHRDYRVGTFLARDAWKIFVVMAISLAVFGLWFV
                     FDPDPQAVWREFIVQENLGKIDKSSGGYLSHLLWGGSSIWSLALGYPLNAGLLAFPVA
                     ALFIGAFSRRAALADGEKLLWIWVLVLFLVFSLPSQRSSRYLLAAMPALAVLLALDWD
                     RIDRKAFVASIITTAAFVAVLAYASIRLRHYFAGVPLHGAAYWALLAVTGIVLAVALL
                     TPALTRACLNAGILLAFLSLAAFLRPFDGPMGSYGPEAQRWAQGKEVWVPYNFNAKYE
                     RYRFML"
     gene            complement(1888..3135)
                     /locus_tag="VK429_06775"
     CDS             complement(1888..3135)
                     /locus_tag="VK429_06775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011799749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HLN91547.1"
                     /translation="MTDGMDINFQRKIDRFVGVPVCALLSLVERLRRRRPVADPPKRI
                     LVLLLSEMGSLVLARPMFSYLKSRYPNASIHVMVFEKNREVLDLLAVVPETDVLTLND
                     RSIGAFASDSIGILRRMRSLRFDVVIDCELFARVSSIFSYLSGAPVRVGFHPHTQEGL
                     YRGSYINRPVLYNPYRHIARQFLALAAALESDTCPVSKDAPSADSVGMPMLDIGPVER
                     GEMAERLDADFPAIRGKKLVLVYPSGGILPIRAWPLEHYRRLCAALLGEGYAIGIIGL
                     QSDRSYAQVLQDDCRSPLCIDLTGYTKSVRELVVLFYRASLLITNDGGPVHFSTLTPI
                     PSIVFFGPETPVLYGSLAKNAHSFFLSVPCSPCLTAYNHRTSPCDGDNQCLNRIDPEQ
                     VVARARMMLESPRGTGAAAGDDG"
     gene            3202..4170
                     /locus_tag="VK429_06780"
     CDS             3202..4170
                     /locus_tag="VK429_06780"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLN91548.1"
                     /translation="MARITIRPLSPEDLDRVSDIETRISVRPRRGFLEKRFAAAPDDF
                     IACAALTDGNLAGYAFARLQEGEFGTRDAMAVLDVLGVAPDAQGEGIGKAVIAEVERQ
                     MRARGIGTLRTQVDWGNPAMIRFFSATGFLLAPVQILERDTSALREEIREVGSAGADA
                     RTPIRAGGDYYEALSRDRVPVRSLKEDDLEAVVRIDRKLTGRDRSAYYAAKLREMLTE
                     SGIRVSLVAEDDGFVVGFVMARVDFGEFGKVDKAAVLDTIGVHPGFAGTGIGHALLSQ
                     LFLNLATLQVETVLTQVSPENIDLQRFLYYCGFHPSQRLMLSKTIA"
     gene            complement(4212..4643)
                     /locus_tag="VK429_06785"
     CDS             complement(4212..4643)
                     /locus_tag="VK429_06785"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HLN91549.1"
                     /translation="MLIARMAPGPSHTLEIRVRFGETDPYGVAYFAAILDYFKRGMDE
                     FLRSRGISPNLAYRNRKRNYGFPVVATQCRYRAPIRFDDLLTLRTRVARVEENGVTFG
                     FSLFRTEAGKDILAAEGKISCRAIDATWKTIPLPPELKAVL"
BASE COUNT          965 a         1439 c         1588 g          766 t
ORIGIN      
        1 gaagcatgaa ccggtaccgt tcgtacttgg cgttgaaatt atacggcacc cagacttcct
       61 ttccctgcgc ccaccgttgc gcctcggggc cgtagctgcc catcggcccg tcgaaggggc
      121 ggagaaatgc ggccagcgaa aggaaggcca gcaagatgcc ggcgttcagg cacgcgcggg
      181 tcagcgccgg cgtgaggagg gcgacggcca ggacgatccc cgtgaccgcc agcagcgccc
      241 aataggcggc cccgtgcagc ggaacgccgg cgaagtagtg ccgcaggcgg atggaagcat
      301 aggcgagaac ggcgacgaag gcggccgtcg taattatgct cgccacgaac gccttgcggt
      361 cgatccggtc ccagtcgagg gcgagcagga ccgccagcgc cggcatcgcc gcgagcagat
      421 aacggctcga gcgctgactt ggcaggctga acaccaggaa aaggaccagc acccagatcc
      481 agagcagttt ttccccatcg gccaacgcgg cgcgccggga gaacgccccg atgaacagcg
      541 ccgcgaccgg aaaggccagc aacccggcgt tcagcgggta tcccaacgcc aggctccaga
      601 tgctggagcc gccccacagc aggtgggaga ggtacccgcc ggacgacttg tcgattttcc
      661 cgaggttctc ctggacgatg aattcccgcc acacggcctg cgggtcgggg tcgaacacaa
      721 accacaaacc gaagacggcc agtgaaatcg ccatcacgac gaagatcttc cacgcgtccc
      781 tggcgaggaa cgttccgacg cggtagtcgc ggtgctgcca gaatcccgcg gccagaccca
      841 ggcctgcggg gatcgccaac gcgaaggact tgtacagcag gcagaccccc acggcgacac
      901 ccgacacgac gggaaaaacg aagcgcgaag aaaaggaggc ggggcgccag tagagcaggg
      961 caaagaacgg aaggaaaagc cagaacacct cgggaggatt ggtcagaaaa ggtcgcccgt
     1021 agcgataggt ggagaaaaaa gcgagaaacg tcgacatggc gaggaaaccg gcctccggcc
     1081 ggccggacaa tttcctggcc agcaggaaca ccatcgtggc cgtcaacagg gtgtacagga
     1141 cgctcgggta tcgcaaattc catagcgtcc agcgttgccc ccagtgggtg gacgcgatcc
     1201 cctgccagaa gagcatcggc ggcttggtgt tgcgcatatg ctccatggtg gactggagcg
     1261 gcaggagtgc cccgctctcc gcggtcacgc gggtgatatt ggtatagggg tattcatcgc
     1321 cgttcttggg gatgtgctgg ctgtccagtc cgaaaaaata ggtgaagacg gcgatccccg
     1381 tgacgataca gaaccagatc cgaagcggac ggttttcgcg ggtggggatc gacaacagtt
     1441 tgcccaggcc gaaggtccat gcgtcgttga ccaggtaatt gaagattccg gctgccagga
     1501 tcgcggtgaa gttcgccagc aggtagtgaa catgagcggc cagtatcttg gtgaatgcca
     1561 gttgcagcag gatcccgaac aggcaggcta gcgtgtattg cccgaactgg agaagcaacg
     1621 gcttgtcgct gccgtgcctc cggtcttccc aggtccacag acggttccag gtgaaattgt
     1681 tccccgtggc gcagaggatg gcgaggccaa gggagacgtt gagccgcatg gacggggatt
     1741 cgatcgcggt gaacaggtac tcctgtccga gatataagac tccaagattg atcaggacgc
     1801 cggagccgcc gaccgtcccg aacttgatga accgatgccg gaagatccac ccgatgaacc
     1861 gcgagttcag cagtgcctcg atatagctca tccgtcgtcg cctgccgccg caccggtgcc
     1921 tcggggggat tcgagcatca tccgcgccct tgcaaccacc tgttccgggt cgatccgatt
     1981 caggcactgg ttatcgccgt cgcagggcga ggtccgatgg ttgtacgcgg tgagacaagg
     2041 cgagcagggc accgacagga aaaaagagtg ggcatttttc gccagggacc cgtagagcac
     2101 cggtgtctcc gggccgaaga acacgatcga cgggatgggc gtgagcgtcg agaagtgcac
     2161 cgggcccccg tcgttggtga tcagcagcga cgctcggtaa aacaggacca ccagttccct
     2221 gaccgacttc gtgtagccgg tcaggtcgat gcaaaggggg ctccggcagt cgtcctggag
     2281 gacttgcgcg taggaacggt cggattgcag tccgatgatc ccgatcgcat acccttcgcc
     2341 aagcaacgcg gcgcagaggc gacggtaatg ttcgagcggc caggcgcgga tcggaaggat
     2401 gccgccgctc gggtagacca gcaccagctt tttcccccgg atcgcgggaa aatcggcgtc
     2461 cagtcgctcc gccatctccc ctcgttccac cggcccgata tcgagcatgg gcatcccgac
     2521 ggaatcggcc gatggcgcgt ccttggagac cggacaggtg tcggattcga gcgcggccgc
     2581 cagcgccagg aactggcgtg ctatgtgccg atagggattg tacaagaccg ggcgattgat
     2641 ataggagccg cggtacaggc cttcctgggt gtgggggtgg aagccgaccc gcacgggtgc
     2701 gccggaaagg taggagaaga tgctgctgac ccgggcgaac agctcgcagt cgatcaccac
     2761 gtcgaaacgg agagagcgca tcctgcgcaa tatgccgatg ctgtcggacg caaacgcgcc
     2821 gatggaccgg tcgttcaacg tcagcacgtc ggtttccgga acgaccgcga gcaggtccag
     2881 cacttcgcgg tttttctcga ataccatgac gtgtatggag gcgttcggat accgactctt
     2941 cagatacgag aacatcgggc gggcgagcac caggctgccc atctccgaca gcaggaggac
     3001 caggatccgt ttcggtgggt ccgcgaccgg ccgtctccgg cgcagacgct cgaccaggga
     3061 caacagggcg caaacgggca ccccgacgaa acggtcgatt tttcgttgaa aattgatgtc
     3121 cattccgtca gtcacgtgaa agaatatcta ccggtcgccc ccggatacat tatcacaccg
     3181 acagcaagga ggtaggagcg aatggcccgc atcacgatcc ggccgctctc cccggaggac
     3241 ctggaccggg tttccgacat cgaaacgcgg atctcggtgc gcccgagaag gggtttcctc
     3301 gagaagcggt tcgctgcggc gccggacgac ttcatcgcct gcgcagccct tacggacgga
     3361 aatctcgccg ggtacgcctt cgcccggctc caggaaggcg aattcggcac ccgggatgcc
     3421 atggcggttc tcgatgtcct cggtgtcgcc cccgacgccc agggggaggg gatcgggaag
     3481 gcggtcatcg ccgaagtgga acggcagatg cgggcccgtg ggatcgggac gctgcggacc
     3541 caggtcgact ggggaaaccc cgcgatgatc cgcttcttct ccgccacggg attcctcctc
     3601 gcgcccgtcc agatcctcga gcgggacacc tccgcgttgc gtgaggagat ccgggaggtc
     3661 gggagcgcgg gggcggatgc gcgaacgccg atacgtgccg gcggggacta ctacgaagcg
     3721 ttgtcccgtg accgcgtccc ggtgcgctcg ctgaaagagg acgacctcga ggcggtcgtc
     3781 cggatagacc ggaagctcac cggccgggac cgctccgcct actacgccgc caagctccgg
     3841 gagatgctga cggaatccgg gatccgggtg tcgctcgtgg ccgaggacga cgggttcgtc
     3901 gtcggattcg tcatggcgcg ggtcgacttc ggggaattcg gcaaggtcga caaggccgcc
     3961 gtcctggaca cgatcggggt tcacccgggc ttcgcgggta ccgggatcgg gcacgccctg
     4021 ctctcccagc tcttcctgaa cctcgccacc ctccaggtcg agaccgtgct cacgcaggta
     4081 tcccccgaga acatcgacct gcagcgcttt ctgtactact gcggcttcca cccttcccaa
     4141 cggctgatgc tgagtaaaac gatcgcgtaa aagggcgggg cggcccggag gccaccccgc
     4201 ccgccgccaa atcagagaac cgccttcagc tcggggggca acgggatcgt cttccaagtc
     4261 gcgtcgatgg cccggcacga tatcttccct tccgcggcga ggatgtcctt ccccgcctcg
     4321 gtgcggaaga gggagaagcc gaaggtgacg ccgttttcct cgacccgcgc gacgcgggtg
     4381 cgcaacgtaa ggaggtcgtc gaaccggatg ggggcgcgat agcggcattg ggtcgccacc
     4441 acggggaacc cgtagtttcg cttccggttc cggtaggcga ggttgggaga gatgccgcgt
     4501 gaacggagga attcgtccat cccgcgcttg aagtagtcta ggatcgccgc gaagtacgcc
     4561 acgccgtacg ggtcggtctc gccgaaccgg acgcggatct cgagggtgtg ggagggaccg
     4621 ggcgccattc tggcgattag catcccctct ccgccatttc ttgtcaaatg gacgttgtag
     4681 accgagtgcc ctgcctgcgc ggcaggcagg gatcgggtag gggaaaatgt cttgacacgt
     4741 taattggtat tgtggtac
//
LOCUS       DATGYW010000489         1804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_418863, whole genome shotgun sequence.
ACCESSION   DATGYW010000489 DATGYW010000000
VERSION     DATGYW010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418863"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1754)
                     /locus_tag="VK429_06790"
     CDS             complement(<1..1754)
                     /locus_tag="VK429_06790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HLN91550.1"
                     /translation="MAYLDYRNRIKRVDFSKNEKVVEIPNLIQVQQESYAEFLQADVP
                     PEKRRDVGLQTVFKGIFPITDYNGRASLEFLSYAIGELKWSEEECRERGVTYAAPIKV
                     TVQLVIFDVDEKTGARTIRDVKEQEVFFGEIPLMSERATFIINGTERVIVSQLHRSPG
                     VFFEHDKGRSHASGKVLFSARIIPYRGSWLDFEFDHKDALYIKIDRKRKFPIAVLLRA
                     FGRTTEELLRIFYDAEEVTLQGEKYAKDFRPELMVGLKMPVEVRHPGKPGEIAFKKGV
                     KISKKRVERYAREGVVFGRILLPSDDLIGKVVVSDIADPATGEVLVECGQQITPEILG
                     KLWEKNVEKLTIFTLENSDRAVWEGLVSDKIKTREEALKEIYKKMRPGDPPTKDAAKT
                     LFENMFFNPERYSLSRVGRLKLDHKLGITESDLEKTVLTQEDILRVIRYLIGLKNGVG
                     EADDIDNLGNRRVRTVGELIENQFRMGLVRVERAIREKMGLQDIETLMPHDIINAKPV
                     SAVIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYG
                     RICPIETPEGPNIGLIASL"
BASE COUNT          296 a          584 c          561 g          363 t
ORIGIN      
        1 agcgaggcga tcagcccgat gttcggcccc tccggagtct cgatcggaca gattcgcccg
       61 tagtgcgtcg gatggacgtc ccgcacctcg aatcccgcgc gctcccgggt caggccgccg
      121 ggcccgaggg cggagacgcg ccgcttgtgg gtcacctcgg agagaggatt cgtctggtcc
      181 atgaactgcg acagctggga cgacccgaag aactccttga tgaccgcgga caccggcttc
      241 gcgttgatga tgtcgtgggg catcagcgtc tcgatgtcct gcagccccat cttttcgcgg
      301 atggcgcgct ccacgcggac cagccccatc cggaactggt tctcgatcag ctcgccaacg
      361 gtgcggacac ggcggttccc gaggttgtcg atgtcgtccg cctccccgac gccgttcttc
      421 aggccgatca ggtagcggat gacccgaagg atgtcctcct gcgtcaggac cgttttctcg
      481 aggtcgcttt ccgtgatccc gagcttgtgg tcgagcttca ggcggccgac ccgcgacagg
      541 ctgtaccgct cgggattgaa gaacatgttc tcgaagagcg tcttggcggc gtccttcgtg
      601 ggggggtcgc ccgggcgcat cttcttgtag atctccttca gggcctcctc gcgggtcttg
      661 atcttgtcgg agaccagacc ctcccagacg gcgcggtcgg agttctcgag cgtgaagatg
      721 gtaagctttt cgacattctt ctcccacagc ttcccgagga tctccggggt gatctgctgg
      781 ccgcactcga ccaggacctc cccggtcgcc gggtcggcga tgtcggagac gactaccttg
      841 ccgatgaggt cgtcggacgg caacaggatc cggccgaaga cgaccccctc gcgggcgtac
      901 cgttcgacgc gcttcttgct gatcttcacg cccttcttga aggcgatctc ccccggcttg
      961 ccggggtgac ggacctccac gggcatcttc agcccgacca tcaactccgg gcggaaatcc
     1021 ttggcgtact tctccccctg gagggtcacc tcttcggcgt cgtagaagat ccggaggagt
     1081 tcctcggtgg tccgcccgaa cgcgcgcaat agcacggcga tggggaactt ccgcttccgg
     1141 tcgatcttga tgtagagggc gtccttgtgg tcgaactcga aatcgagcca cgaaccgcga
     1201 tacgggatga tccgggcgct gaacagcact ttccccgacg cgtgcgagcg gcccttgtcg
     1261 tgctcgaaga agacgcccgg agaccggtgc agctggctga cgatgacccg ctcggttccg
     1321 ttgatgatga aggtggcccg ctccgacatg agggggatct ccccgaagaa gacctcctgc
     1381 tcctttacat cccggatggt ccgggcgccg gtcttctcgt ccacgtcgaa gatgaccagc
     1441 tggaccgtca ccttgatggg ggcggcgtac gtcaccccgc gctcgcggca ctcctcttcc
     1501 gaccacttca gctcgccgat cgcgtaggag aggaactcga gggaggcgcg cccattgtag
     1561 tcggtgatgg gaaagattcc cttgaagacg gtctggagcc ccacgtccct gcgcttctcg
     1621 ggcggaacgt ccgcctgcag gaactccgcg tacgactcct gctgaacctg tatgaggttc
     1681 ggaatctcca cgactttctc gttcttcgag aagtccaccc gcttgatccg gttcctgtaa
     1741 tccagataag ccatcgtgtc accccgggga taaaaccgtg aatgcggcgg gggacgatcg
     1801 tccc
//
LOCUS       DATGYW010000490         1506 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_189453, whole genome shotgun sequence.
ACCESSION   DATGYW010000490 DATGYW010000000
VERSION     DATGYW010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189453"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..634
                     /locus_tag="VK429_06795"
     CDS             <1..634
                     /locus_tag="VK429_06795"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HLN91551.1"
                     /translation="GDTLLSRQEEERRRLADIEQEKKRKEKELKSLRAKIARMESVVS
                     RVERQVKERERRARNAARGGSAAKVPAEAPRRFASLSGGLSAPLEGKVVTRFGRQHDT
                     TFDVTIENRGVEIEAPSGASVKAVGQGEVAFAGSVSGFGNVLIVQHGGGLFSVYGRLE
                     SFLVKQGEVVKKGTVVGRLPGSPSGKSVLYLELRAGGTAIDPTSVIPLDR"
     gene            650..>1506
                     /locus_tag="VK429_06800"
     CDS             650..>1506
                     /locus_tag="VK429_06800"
                     /inference="COORDINATES: protein motif:HMM:NF015531.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HLN91552.1"
                     /translation="MEPTGAAPRKTAGRKWLGTVLIVAVFVGGFVVGDLTTSRHAALA
                     NVAYSKLKLFGEVLSIIQSSYVEEVNIDNLVRGAINGMVQTLDPHSSYLTPEMLKQVE
                     VETKGVFGGLGIEIGMKDGFLTVIAPIEDTPAARAGLLAGDRIVKIENESTKNMNVMD
                     AVKRLRGEPGSKVTITVARESLPEPKAYTLTRDIIKIKSVKSKSMGDGIGYIRLTQFQ
                     QDSHQEVNRALQAFLKEKGGMKGLILDLRNNPGGLLDQAVRIADEFVESGLIVYTDGR
                     VEAQKTKYVA"
BASE COUNT          306 a          423 c          551 g          226 t
ORIGIN      
        1 gggggatacg ctcctctccc ggcaggagga ggagcgccgg cgcctcgccg acatcgagca
       61 ggagaagaag cggaaggaga aggaactgaa atcccttcgc gcgaaaatcg cgcggatgga
      121 gtccgtcgtc tcccgggtcg agcggcaagt caaggagcgg gagcggcgcg cgcgaaatgc
      181 ggcgaggggg ggatcggcgg ccaaggtgcc cgcggaggcc ccgcgacggt tcgcgtcgct
      241 ttcgggaggg ctttcggcgc cgctggaggg gaaggtcgtc acccgcttcg gacgccagca
      301 cgacacgacc ttcgacgtga cgatcgagaa ccgtggagtg gagatcgagg ctccctcggg
      361 ggcgtccgtg aaggcggtcg gccaggggga ggtcgcgttc gccgggtctg tctccgggtt
      421 cgggaatgtg ctgatcgtgc agcacggtgg cggactcttt tccgtttacg gtcgcctgga
      481 atcgttcctc gtaaagcagg gggaggtcgt aaaaaaaggg acagtggtgg ggcggctgcc
      541 ggggtcgccg tccgggaaat cggtgctata cttggaactg cgggcgggag gcaccgccat
      601 cgatccgacc tccgtcattc cactcgaccg ttaaggagct gacaaacgca tggagccaac
      661 aggagccgca ccccgcaaga cggcggggag gaagtggctg ggaaccgtac tgatcgtcgc
      721 ggtgttcgtc ggcggattcg tggtgggaga cctcacgacc tcccggcacg ccgcgcttgc
      781 gaacgtcgcc tacagcaagc tgaagctctt cggcgaagtc ctatcgatta tccagagcag
      841 ctacgtcgag gaggtgaaca tcgacaacct cgtccggggg gccatcaacg ggatggtcca
      901 gacactcgac ccgcacagct cctacctcac gccggaaatg ctgaagcagg tcgaggtcga
      961 gacgaagggg gtgttcgggg gcctggggat cgagatcggg atgaaggacg gcttcctcac
     1021 ggtgatcgct ccgatcgagg acacccccgc ggcccgggcg ggcctgctgg ccggggacag
     1081 gatcgtgaag atcgagaacg agtcgacgaa gaatatgaac gtgatggacg cggtgaaacg
     1141 tctccgggga gagcccggga gcaaggtgac gatcacggtg gcgcgggaat cgctgcccga
     1201 gccgaaggct tacaccctca cgcgcgacat catcaagata aagagcgtca agtccaagtc
     1261 gatgggggac gggatcggct acatccggct gacgcagttc cagcaggact cccaccagga
     1321 ggttaaccgc gccctgcagg cgttcctgaa ggagaagggg gggatgaaag ggctcatcct
     1381 cgacctgagg aacaacccgg gcgggttgct cgaccaggcg gtccggatcg cggacgagtt
     1441 cgtcgaatcg gggctcatcg tctacaccga cggccgggtc gaggcccaga aaacgaagta
     1501 tgtggc
//
LOCUS       DATGYW010000491         2914 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_419077, whole genome shotgun sequence.
ACCESSION   DATGYW010000491 DATGYW010000000
VERSION     DATGYW010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2914
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419077"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..682)
                     /gene="hrcA"
                     /locus_tag="VK429_06805"
     CDS             complement(<1..682)
                     /gene="hrcA"
                     /locus_tag="VK429_06805"
                     /inference="COORDINATES: protein motif:HMM:TIGR00331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HLN91553.1"
                     /translation="MASGMDDRTTRVLRHIVEDYIATAEPVGSRTISKKMGQALSPAT
                     IRNIMADLEEAGFLAQPHTSAGRVPTGAGFRYYIDHLLARQSLARGEIDQLQRAAGEG
                     NGPADELVRQVSRLLSNLARQASVVVVSSPEQQILSSVSLMRAGVERILLVTVMRGGW
                     VQHRLIEGEPDITGDELEKISAYLNELAEGRTLLQLRARIFDELGKEKARYDRVMGRA
                     LAMSARALT"
     gene            866..2029
                     /locus_tag="VK429_06810"
     CDS             866..2029
                     /locus_tag="VK429_06810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013013161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HLN91554.1"
                     /translation="MNFVHLSPHFPPNYYRFCVGLREEGVNVLGLADAPYESLRPELR
                     GALSEYYRVDDMNSYDELVRALGHFTHRHGKLDGIDSHSEHWLETEARLRTDFNMAGL
                     RQDRIGIVKRKSSMKEIYRSVGIRVARGAVVRTLEEARRLVTETGYPVVAKPDVGVGA
                     AATFKIRDDGELSSFFDRKPPVDYIVEEFIQGKILSFDGLTDRDGNIVFFTSHAFSQG
                     IMETVNEDADIFYHSLREIPADLEEAGRRTARAFDVRGRFFHFEFFRTDRDGGIVALE
                     VNLRPPGGLTTDMFNYANDFDIYREWARVVAGNRFAAAWTRPYHVGYVGRKRGKRYVH
                     GPGEILAAFGGLIVHHEEIDSIFRAAIGDYGYLVRSKDLDEVRSAARYIQETA"
     gene            2052..2789
                     /locus_tag="VK429_06815"
     CDS             2052..2789
                     /locus_tag="VK429_06815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013156754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HLN91555.1"
                     /translation="MNVAYHRWWSRNLGQDMELKVYGRAGKPVVVFPSSGGRFHEYED
                     FGMVEACRPFIDAGAVTLFTLDSVDRQSWLNEGAHPAERARRHNDYDRYVVEEAAPFI
                     RDLLPGATGFLATGCSLGGYHSANFFFRHPDVFDALIALSGVYKLTRFIGDAMDENVY
                     FNTPLAYLPALSDPWYLDRYRRSRIVVCVGQGAWEDEMVADTRDLQAILASKGIPAWI
                     DFWGHDVDHDWPWWRRQMPYFLGHLFP"
BASE COUNT          474 a         1002 c          935 g          503 t
ORIGIN      
        1 ccgtaagcgc ccgcgcgctc atcgcgaggg cgcgccccat cacccggtcg taccgggctt
       61 tctccttgcc gagctcgtcg aagatccggg cgcgcagctg gagcaacgtc cgcccttccg
      121 ccagctcatt caggtacgcg ctgatcttct cgagctcgtc gccggtgata tccggctcgc
      181 cctcgatcag gcggtgctga acccatcctc cgcgcatcac ggtcaccagc aggatcctct
      241 ccactcccgc ccgcatgagg cttacggaac taaggatctg ctgctccgga gaggaaacca
      301 cgacgacgct cgcctggcgg gccaggttcg acagcaggcg gctgacctgc cgcaccagct
      361 cgtccgccgg cccgttccct tcgcccgccg cccgctgtag ctggtcgatc tctccgcggg
      421 cgagggattg ccgcgccagg aggtggtcga tatagtaccg gaaccccgcc cccgtgggga
      481 cgcgccccgc ggaggtgtgc ggctgggcga ggaacccggc ctcctcgagg tccgccatga
      541 tgttgcggat cgtcgcgggc gagagggcct gccccatctt cttggagatg gttcttgatc
      601 cgaccggctc cgccgtggcg atgtaatcct cgacgatgtg gcgcaggacc cgggtcgtgc
      661 gatcatccat cccggaagcc atttcacctt ctccgcaaac gggttagcac tcccgtaagg
      721 agagtgctaa gggacaatgt agcagccgcc gaccggtggt gtcaagccgg tccgcccctt
      781 cgatttccag ccggtccccg gtcaaggaac cccgaaccgg cacagtgcct cgcaattgca
      841 ccagcacttg tgcgacgata cgccgatgaa cttcgtccac ctctccccgc attttccgcc
      901 gaactactac cgcttctgcg tcggtctccg ggaggaaggg gtgaacgtcc tcgggctcgc
      961 ggacgccccg tacgagtcgc tgcggccgga actgcgcggg gcgctctccg aatattaccg
     1021 cgtggacgac atgaactcgt acgacgaact cgtccgggcg ctcgggcact tcactcaccg
     1081 gcacgggaag ctcgacggga tcgactccca cagcgaacat tggctggaga ccgaggcgcg
     1141 ccttcggacg gatttcaaca tggccgggct tcgtcaggac cggatcggga tcgtcaagcg
     1201 gaagtcctcc atgaaggaaa tctaccggtc cgtcgggatc cgggtcgccc gcggcgcggt
     1261 ggtccggacc ctcgaggagg cgcggcggct ggtcaccgaa accggctacc cggtggtcgc
     1321 caagcccgac gtgggggtgg gggcggcggc gaccttcaag atccgcgacg acggcgagct
     1381 ctcctccttc ttcgaccgga agccgccggt cgactacatc gtggaggagt tcatccaggg
     1441 gaagatcctc tcgttcgacg gcttgaccga ccgcgacggc aacatcgtct tcttcacctc
     1501 gcacgccttc agccagggga tcatggaaac ggtcaacgag gacgccgaca tcttctacca
     1561 ttccctccgg gagatcccgg cggacctgga agaggcgggg cggcgcacgg cccgggcctt
     1621 cgacgtccgc ggacggttct tccacttcga attcttccgt accgaccgcg acggcgggat
     1681 cgtcgccctc gaggtgaacc tgcgcccccc gggggggttg accacggaca tgttcaatta
     1741 cgccaacgac ttcgacattt accgggagtg ggcgcgcgtc gtggccggca accgcttcgc
     1801 ggcggcgtgg acccgtccgt accacgtcgg ctacgtcggc cggaagcggg ggaagcggta
     1861 cgtccacggt cccggggaga tcctcgcggc cttcggaggc ctcatcgtgc accacgagga
     1921 gatcgactcc atcttccgcg cggcgatcgg cgactacggg tacctggtcc ggtcgaagga
     1981 cctcgacgag gtgcgttccg ccgcccggta catccaggaa accgcgtgac gcggcgagaa
     2041 agggattttc gatgaacgtc gcgtaccacc ggtggtggag ccggaacctc ggacaggaca
     2101 tggaactcaa ggtgtacggc cgcgcgggga aaccggtggt cgtcttcccc tcctccggcg
     2161 gccggttcca cgagtacgag gatttcggga tggtcgaggc gtgccggccg ttcatcgacg
     2221 cgggcgcggt caccctcttc accctggaca gcgtggaccg gcagtcgtgg ctgaacgagg
     2281 gggcccaccc cgcggaacgc gcgcgaagac acaacgacta cgaccggtac gtggtcgagg
     2341 aggcggcccc tttcatccgg gatctgctcc ccggcgctac gggatttctc gcgacggggt
     2401 gcagcctggg gggataccac tccgcgaatt tcttcttccg ccaccccgac gtcttcgacg
     2461 ccctgatcgc cctctcgggc gtgtacaagc tcacgcggtt catcggggac gcgatggacg
     2521 agaacgtcta cttcaacacg cctctcgcct acctgccggc tctgtccgac ccgtggtacc
     2581 tcgaccgcta ccgccgcagc cggatcgtgg tgtgcgtcgg gcagggggcg tgggaggacg
     2641 agatggtcgc ggacacccgc gacctgcagg caatcctcgc gtcgaaggga atccccgcgt
     2701 ggatcgactt ctggggccac gacgtcgacc acgactggcc gtggtggcgc cgccagatgc
     2761 cctacttcct gggacacctt ttcccctagt gctgcgtctc acaaataccc tggcattcga
     2821 gcgccgctgc atccgctcca gcttcgttgc gcaagttcga cgtactctcc cggtacgcct
     2881 tcacttgcgc gccttgctgg cgcggcgcat cgac
//
LOCUS       DATGYW010000492         1739 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_189485, whole genome shotgun sequence.
ACCESSION   DATGYW010000492 DATGYW010000000
VERSION     DATGYW010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_189485"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            164..817
                     /locus_tag="VK429_06820"
     CDS             164..817
                     /locus_tag="VK429_06820"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:398..400,aa:Sec)
                     /transl_table=11
                     /product="peroxiredoxin-like family protein"
                     /protein_id="HLN91556.1"
                     /translation="MSLKKRLAEFDASRKRPPEVVAILRRGIDYTRESGAAGLRIGER
                     APDFSLPNQRGETVRLSDRLSRGPVVLTFYRGVWUPYCNLELAALAKELETIRSLGAD
                     LVGISPELPDNTLTMAEKHAIPIDILSDATSEVMKKYRLWYAVPAEVKALYLEKFGLN
                     LEKYNGAGRWELPVPATYVLDRDGIVRAGEADPDYTVRMEPSDIVVAIRNISGNLSR"
     gene            869..>1739
                     /gene="arsS"
                     /locus_tag="VK429_06825"
     CDS             869..>1739
                     /gene="arsS"
                     /locus_tag="VK429_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014551585.1"
                     /note="Some members of this family are selenoproteins;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenosugar biosynthesis radical SAM
                     (seleno)protein ArsS"
                     /protein_id="HLN91557.1"
                     /translation="MGDIEKLCDGTTRLREAQAVEPFGEALGRRGLSLVRGETTTLQV
                     NTGYLCNLRCRHCHLEAGPGREEIMSRQTMEAVVSFARRFPFQVLDITGGAPELVPDL
                     PFLVEGLAPLAPRLMLRTNLSALNGPERESLLALCVDHRIVLVASFPSTIPSQTDAQR
                     GAGVTEAGIAVLKKLNAAGYGMEGTGLELDLVSNPVGAFLPASRETAERDFRHDLLRK
                     WGVSFNHLYTFANVPLGRFRTGLLQTGNYERYVKTLVEAFNPSAVEGLMCRTLLSVSW
                     EGFLYDCDFNLAVD"
BASE COUNT          319 a          533 c          585 g          302 t
ORIGIN      
        1 gctgggatcg ttcgcgctgt tggggctgtt cgccttgctg cccacgatca tcaacgccgt
       61 gaagaagcgc agggcgcgga atcgattccc ttccggcggg agagcagagg ggaagggata
      121 aactggtcac gggccccgcg ccgggcgaaa aggaggttcg accatgtccc tgaagaaacg
      181 tctcgcggaa ttcgacgcgt cgaggaaacg gccgccggag gtcgtggcga tcctccgccg
      241 ggggatcgac tacaccaggg aatcgggagc ggccggtctg cggatcgggg agcgtgcccc
      301 ggacttctcc ctgccgaacc agcggggcga gacggtgagg ctttccgacc gtttgtccag
      361 gggcccggtg gtcctcacct tctaccgggg ggtctggtga ccgtactgca acctggagct
      421 ggcagctctg gcgaaggaat tggaaacgat ccggtccctc ggcgcggacc tggtgggcat
      481 cagcccggaa ctccccgaca acacgctgac gatggcggag aagcacgcga tcccgatcga
      541 catcctgagc gatgcgacga gcgaggtcat gaagaagtac cggctttggt acgcggttcc
      601 cgcggaggtc aaggcgctgt acctggagaa gttcggactc aacctggaga agtacaacgg
      661 cgcggggcga tgggagcttc ccgtccccgc gacctacgtg ctcgatcggg acggcatcgt
      721 ccgggccggc gaggcggacc cggactacac cgtgcgaatg gagccgtcgg acatcgtcgt
      781 ggcaatccga aacatctccg gaaatctttc caggtagaga agggataaaa tcgaattggc
      841 ggaaggcact gctgcggggt caacggaaat gggagacatc gaaaagttgt gcgatggaac
      901 gactcgcctc cgggaggcgc aggcggtcga accgttcgga gaggctcttg gacgccgcgg
      961 tctgtcgctt gtccgcgggg agaccaccac cctccaggtg aacacggggt acctgtgcaa
     1021 tcttcgctgc cgccactgcc acctcgaggc cggtccgggc agggaagaga tcatgtcccg
     1081 acagacgatg gaggcggtcg tctccttcgc ccggcgcttc ccgttccagg tcctcgacat
     1141 caccggcggg gcgcccgagc tcgtcccaga tctcccgttc ctcgtcgaag ggctcgcccc
     1201 gctcgccccg cggctgatgc ttcggacgaa cctttccgcc ttgaacggcc ccgagaggga
     1261 gtcgctgctt gcgctctgcg tcgatcaccg catcgttctg gtcgcctcct tcccatcgac
     1321 gatcccgtcc caaaccgatg cccagcgtgg cgcgggggtg acggaagccg gcatcgccgt
     1381 gctgaagaag ttgaacgccg ccggctatgg aatggaaggg accgggctgg agctggacct
     1441 tgtctcaaac ccggtcgggg catttctccc cgcttccagg gaaaccgccg agcgggattt
     1501 ccggcacgac ctgctgcgga aatggggggt ttcgttcaac cacctgtaca cgttcgcgaa
     1561 cgtaccgctc gggcgtttcc ggacggggct gctgcagacg ggaaattacg aacggtacgt
     1621 gaaaaccctc gtggaagcgt tcaatccctc agcggttgaa gggctgatgt gccgaacgct
     1681 tttgtccgtc tcgtgggaag ggttcctgta cgactgcgac ttcaacctcg ccgtcgacc
//
LOCUS       DATGYW010000493         1875 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_348514, whole genome shotgun sequence.
ACCESSION   DATGYW010000493 DATGYW010000000
VERSION     DATGYW010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348514"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..549
                     /locus_tag="VK429_06830"
     CDS             <1..549
                     /locus_tag="VK429_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012430345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HLN91558.1"
                     /translation="NDEVEKSEVPMMLNVYAAILLLVFLAYRDVRAMIACCMPLAVGT
                     FIGYWFMKALNIGLTVATLPVMVLAVGIGVDYAFYIYNRLQLHLGQGFSIYAAMEKAL
                     AFEAMATIFTAITLAVGVVTWSFSPLKFQADMGKLLAFMFLVNMIMAMTTLPALAVVL
                     ERILPRKSPVRVSEILSHPTVE"
     gene            576..1613
                     /locus_tag="VK429_06835"
     CDS             576..1613
                     /locus_tag="VK429_06835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015452174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YCF48-related protein"
                     /protein_id="HLN91559.1"
                     /translation="MSEIVHRGRRFGVLAALALSVFLACPANAREGASPPVPGAGGAP
                     GPLKIQPAEATTAATKAMILSSARAGKRIVAVGNHGIVLLSDTDGADFRQAKSVPVRS
                     TLTAVIFVDDKTGWAVGQWGVVLRTDDAGESWTLQRYDTSVDQPLFSVWFRDRQRGYA
                     VGLWSLLIATVDGGKTWTRITLPPPPGRKKADRNLLKIFANRMGTLFVAAEQGMVLKS
                     YDGENWTYIDTGYKGSFWTGIVLNNGTLLVGGLRGTIYRSTDDGSSWREAKTSFKSSI
                     TDFAEAGGKVYAAGLDGVFLESDDHGITFKGSQREDRVPFTAISVNSVGKLVKFSKQG
                     VVKDPPNEPSK"
     gene            1668..>1875
                     /locus_tag="VK429_06840"
     CDS             1668..>1875
                     /locus_tag="VK429_06840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-dependent synthetase"
                     /protein_id="HLN91560.1"
                     /translation="MNGFGHYNEIRKNFQWNVPDDFNFGRDVVDRYASDRSKVAFFYE
                     DARGVAAKYTFWEVSRVSDRLGNVL"
BASE COUNT          330 a          582 c          632 g          331 t
ORIGIN      
        1 aacgacgagg tcgagaagag cgaagtgccc atgatgctca acgtgtacgc ggcaattctc
       61 ctcctcgtct tcctcgccta ccgcgacgtg cgcgccatga tcgcctgctg catgccgctg
      121 gccgttggga cgttcatcgg atactggttc atgaaggcac tgaacatcgg tctcacggtg
      181 gccaccctcc cggtgatggt tctcgcggtg gggatcgggg tggactacgc cttctacatc
      241 tacaaccggc tgcagcttca cctgggccag gggttctcca tctacgcggc gatggagaag
      301 gcgctcgcct tcgaggcgat ggcgaccatc ttcaccgcga tcacgctggc ggtcggcgtg
      361 gtcacctggt cgttttcccc cctcaagttc caggcggaca tggggaagct cctcgcgttc
      421 atgttcctgg tgaacatgat catggcgatg accacccttc cggcgttggc cgtggtcctg
      481 gaacggatcc tcccgcggaa gagccccgtg cgggtatccg agatcctgag ccaccccacc
      541 gtggaatgaa gaatggaaga acggagagga ccgatatgag cgaaatcgtt caccgcggca
      601 ggcgcttcgg ggttctggcg gccctggcgc tttccgtgtt cctggcctgc ccagccaacg
      661 cccgggaggg ggcctctccc cccgtcccgg gcgcgggggg cgcacccggc cccctgaaga
      721 tccagccggc ggaggccacc acggcggcca ccaaggcgat gattctctcc tcggcccggg
      781 cggggaaacg gatcgtcgcg gtggggaatc acggcatcgt gctgctctcg gacaccgatg
      841 gcgccgactt ccggcaggcg aagtcggttc cggtccgctc caccctgacg gcggtcatct
      901 tcgtcgacga taaaaccggg tgggcggtgg ggcagtgggg cgtcgtgctg cggaccgacg
      961 acgcgggcga gagctggacg ctgcagcggt acgacacgtc ggtggaccag cccctcttct
     1021 cggtctggtt ccgtgaccgg cagcgcggct acgcggtcgg gctctggtcc cttctgatcg
     1081 caaccgtcga cggggggaag acctggaccc ggatcacgct cccgcccccc ccgggaagga
     1141 agaaagcgga ccgcaacctt ctcaagatct tcgcgaaccg gatggggacc cttttcgtgg
     1201 cggcggagca ggggatggtc ctgaaatcgt acgacggcga gaactggacg tacatcgaca
     1261 cggggtacaa ggggtccttc tggaccggga tcgtcctgaa caacgggacc ttgctggtcg
     1321 gcggactccg cgggacgatc taccggagca ccgacgacgg aagttcgtgg cgggaagcga
     1381 agacgtcgtt caaatcgtcg atcaccgatt tcgcggaggc cggcgggaag gtgtacgccg
     1441 ccgggctgga cggtgtcttt ctcgagagcg acgaccacgg gatcaccttc aaggggagcc
     1501 agcgggagga ccgggtcccc ttcacggcga tctccgtgaa cagcgtgggg aagctcgtga
     1561 agttctcgaa acagggagtg gtgaaggatc cgccgaacga gccgtcgaag taggagcacg
     1621 ccggcaggac cgcgtcgttt ccgccattca catcaggggg tgtcggcttg aacggattcg
     1681 gccattacaa cgagatccgg aagaacttcc agtggaacgt ccccgacgac ttcaatttcg
     1741 gtcgtgacgt cgtcgaccgg tacgcttccg accggtccaa ggtggccttc ttctacgagg
     1801 acgccagggg cgtcgccgcg aagtacacgt tctgggaagt gagccgggtc tccgaccggc
     1861 tcggtaacgt ccttc
//
LOCUS       DATGYW010000494         2458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_511393, whole genome shotgun sequence.
ACCESSION   DATGYW010000494 DATGYW010000000
VERSION     DATGYW010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2458)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2458
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_511393"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            163..1278
                     /gene="alr"
                     /locus_tag="VK429_06845"
     CDS             163..1278
                     /gene="alr"
                     /locus_tag="VK429_06845"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HLN91561.1"
                     /translation="MARPTVAEIRLSALRQNVQVIRALLPQGVGLLGIVKANAYGHGA
                     LPVARALEADGARMLGVATVEEGVELREGGIRLPVVVLGGVDPQQAAEAHARDLSPIL
                     FDRGQIGYLARAAEAAGRPFPVHVKVDTGMGRLGLLPREAMEAAGRIAPNHALRLEGW
                     MTHLSSADGPAAEDREYTATQLTTFQGMLPAVRKAFGDGVAVHALNSAGILRFRDESF
                     DLVRPGITMYGCSPLPPGDASPELRPVMRIVTKVFSLKELPAGHAVSYNRRYRCDGAR
                     RIAVVPIGYADGYRRALTGHARMSVAGRTVPVAGTVCMDHTMIDVTGVPGVAIGTDVE
                     VMGEASMGAEEMARICGTIPYEILVQIGPRIPRVTVD"
     gene            1343..2071
                     /locus_tag="VK429_06850"
     CDS             1343..2071
                     /locus_tag="VK429_06850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011416899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLN91562.1"
                     /translation="MVLDLGAVFTLFVQVVSWVVRPPAEIRNIVKQMEEVGIRSMPVV
                     LVTATFTGMVLALQSYSGFQRFGATSFVGSVVALSITRELGPVFAGLMVSGRVGASMA
                     AELGTMKVTEQIDALTTLATNPVKYLVVPRVVAATIVLPVLVVFADLLGIVGGYFVSV
                     HLLGANPYVYTAKTYQYLEFKDIYTGLIKASVFGTLIALISCHHGFVAKGGAEGVGRA
                     TTRAVVASSMMVLISDYFMTSFMF"
     gene            2093..>2458
                     /locus_tag="VK429_06855"
     CDS             2093..>2458
                     /locus_tag="VK429_06855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011384493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91563.1"
                     /translation="MIEIQGLSKSFGKKVVLDGLDLTVPKGKNTVVIGGSGTGKSVLI
                     KCVVGLLRPEAGEIRIDGQDITRMDERELVRVRRRFGMLFQGAALFDSMDVGENVAFV
                     LRRLKMYPERQIREVVEEKL"
BASE COUNT          378 a          769 c          895 g          416 t
ORIGIN      
        1 gtcacccctg aggctctcag cgaaatgcac ccctggcggt taccgatgat catacggccg
       61 tgggagatga ggtgtcaagg ccgtcccgcg acctttactt gcccggaggg ggtggtgtaa
      121 actctcccag tcgattatca cgcttccccg ggaggtcccg gcttggcccg gcccacggtg
      181 gcggagatcc gcctctcggc cctccggcaa aacgttcaag tgattcgcgc gttgctcccg
      241 caaggcgtcg gccttctcgg catcgtgaag gcgaacgcct acgggcacgg cgcgcttccc
      301 gtggcacgcg ccctcgaggc ggatggggcg cggatgctgg gcgtggccac ggtggaagaa
      361 ggggtggaac tccgcgaggg agggatccgc cttccggtag tcgtgctggg gggcgtcgac
      421 ccgcagcagg cggcggaggc ccacgcccgc gatctgtcgc caattctgtt cgatcggggg
      481 cagatcggct acctggcccg cgcggcggaa gcggcagggc gtcccttccc ggtgcacgtc
      541 aaggtcgaca cggggatggg gcggctcgga ctgctcccgc gggaggcgat ggaggctgcg
      601 gggcggatcg cgccgaatca cgctctgcgg ctggaagggt ggatgacgca cctctcgtcg
      661 gcggacggtc cggcggcgga ggaccgggag tacacggcga cgcagctgac gaccttccag
      721 gggatgctcc ccgccgtgcg gaaagcgttc ggggacggcg tcgcggtcca cgcgctgaac
      781 agcgcgggga tcctccgttt ccgcgatgag tcgttcgacc tcgtccggcc cggcatcacc
      841 atgtacggat gctccccgct tcctcccggg gacgcgtcgc cggagcttcg ccccgtgatg
      901 cggatcgtca cgaaggtatt ctccctgaag gagctccccg cggggcacgc ggtgagctac
      961 aaccggcggt accgctgcga cggcgcccgc cggatcgccg tcgtccccat cgggtacgcc
     1021 gacggctacc gccgcgcgtt gaccggccat gcccggatgt cggtcgccgg gcgcactgtc
     1081 cccgtcgcag gaacggtgtg catggaccac acgatgatcg acgtcaccgg ggtgccgggc
     1141 gtggcgatcg ggacggacgt cgaggtgatg ggggaggcgt cgatgggcgc ggaggagatg
     1201 gcgcgcatct gcgggaccat accgtacgag atcctggtcc agatcggacc gaggatcccc
     1261 cgggtgaccg ttgactgatt ccacggcaag gaaaaacggc gcggtccgga tcgcggagct
     1321 cctcggggag cgggtctacg aaatggtgct ggacctgggg gcggtcttca ccctgttcgt
     1381 ccaggtcgtc tcctgggtgg tgcggccgcc ggcggagatc cgcaacatcg taaagcagat
     1441 ggaagaggtc gggatccggt cgatgcccgt cgtgctcgtc acggccacct tcaccggcat
     1501 ggtcctcgcg ttgcagagct actccgggtt ccagcgattc ggcgcgacca gcttcgtcgg
     1561 ctcggtcgtc gccctttcca tcacccggga actggggccg gtgttcgccg ggctcatggt
     1621 ctccggccgc gtcggcgcct cgatggccgc ggagctgggg acgatgaagg tcaccgagca
     1681 gatcgacgcc ctcaccacgc tcgccaccaa cccggtcaag tacctcgtgg tgccgcgggt
     1741 ggtcgccgcc acgatcgtcc tccccgtgct cgtcgtgttc gcggacctgc tggggatcgt
     1801 cgggggctat ttcgtctccg tccacctgtt gggcgccaac ccgtacgtgt acacggccaa
     1861 gacgtaccag tacctggagt tcaaggacat ctacacgggg ctgatcaagg cctcggtctt
     1921 cgggacgctg atcgccctta tctcgtgcca ccacggcttc gtggcgaagg ggggcgcgga
     1981 aggggtcggc cgggcgacca cacgggcggt cgtggcatcg tccatgatgg tcctgatctc
     2041 ggactacttc atgacgtcgt tcatgttctg acgggaaagg gccgaagccg gcgtgatcga
     2101 gatccagggg ttgagcaaga gcttcgggaa aaaggtggtc ctcgacggcc tcgatctgac
     2161 cgtgccgaag gggaagaaca ccgtcgtcat cggcggaagc ggcaccggca aatcggtcct
     2221 catcaagtgc gtggtggggc ttcttcgccc ggaggcgggg gagatccgga tcgatggcca
     2281 ggacatcacc cggatggacg agcgggagct ggtccgggtc cgccgcaggt tcgggatgct
     2341 cttccagggg gcggccctgt tcgactcgat ggacgtgggg gagaacgtgg cgttcgtcct
     2401 gcggcggctg aaaatgtatc cggagcgcca gatccgggag gtggtggagg agaagctc
//
LOCUS       DATGYW010000495         1623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_313171, whole genome shotgun sequence.
ACCESSION   DATGYW010000495 DATGYW010000000
VERSION     DATGYW010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_313171"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            114..1304
                     /locus_tag="VK429_06860"
     CDS             114..1304
                     /locus_tag="VK429_06860"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015718742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006635 - fatty acid beta-oxidation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HLN91564.1"
                     /translation="MLTKAYIPYRGYYSTPFVRWQGSLANEHSIVLGANTSRRFFESK
                     GWDPKMVEYVLVGSTVYQKQWFYSGPWAAGMMGAAGVPGVLVSQACSTSTFAVYQAGM
                     GIETGLYGNGWVLLADRCSNGPHASWPNPGGPGGQMISEDWVMDNFGKDPWAGGAMIQ
                     TAENVSREHGVTRAECDAITLRRQEQYQDGLANDREFQKRYMFPVEVQLSKKKTITVA
                     ADEGVFPSTKEGLAGLKPVLPEGVHTYGTQTYPADGNCGVFVTTREKAKELGADPKVE
                     IRIVSFGFARTKKAFMAAAVAPSAQMALDNAGIKAADLGAVKTHNPFAANDIVMAKAV
                     GLDANAMNNFGSSLIFGHPQAPTGARLMIEGIEELAAKGGGYLLFSGCAAGDTAASIV
                     FKVG"
     gene            1429..>1623
                     /locus_tag="VK429_06865"
     CDS             1429..>1623
                     /locus_tag="VK429_06865"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:NF014426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HLN91565.1"
                     /translation="MTSCPVRPPCCLHVCEKIHQSFTSHSPADTLEIARALGAALRPG
                     DVVALMGDLGAGKTLFCKGVG"
BASE COUNT          283 a          534 c          550 g          256 t
ORIGIN      
        1 gcacggcgag ccacgaacgg agccccaccc tccgaggcga cgcagcccaa gggggagcac
       61 ttagccctac gcaccgtgtc gccaaatttc tgcagtgaaa aggagaagtg cccgtgctga
      121 caaaagcgta tatcccgtat cgaggttact acagcacccc gttcgtccgc tggcagggat
      181 cgctggcgaa cgagcattcg atcgtcctcg gggcgaacac ctcccggcgg ttcttcgagt
      241 cgaaggggtg ggacccgaag atggtggaat acgtcctggt cggcagcacc gtctaccaga
      301 agcagtggtt ctacagcggc ccctgggccg cggggatgat gggcgccgcc ggggttcccg
      361 gcgtcctcgt cagccaggcg tgctcgacct ccacgttcgc cgtctaccag gccggaatgg
      421 ggatcgagac ggggctctac ggcaacggct gggtcctcct cgccgaccgc tgctccaacg
      481 gcccccacgc ctcgtggccc aacccgggtg gccccggcgg ccagatgatc tccgaggact
      541 gggtcatgga caacttcggg aaggacccgt gggcgggcgg cgcgatgatc cagaccgcgg
      601 agaacgtgag cagggagcac ggcgtgaccc gcgccgagtg cgacgcgatc acgctccgcc
      661 ggcaggagca gtaccaggac gggctagcga acgaccggga gttccagaag cggtacatgt
      721 tccccgtcga ggtccagctt tcaaagaaga agacgatcac cgtcgcggcc gacgaggggg
      781 tcttcccctc gacgaaagag ggattggcag ggttgaagcc cgtccttccc gaaggcgtgc
      841 acacgtacgg cacccagacg tacccggccg acggcaactg cggcgtcttc gtgaccaccc
      901 gggaaaaggc gaaggagttg ggcgccgacc cgaaggtgga gatccggatc gtctccttcg
      961 ggttcgcccg gacgaagaag gcgttcatgg ccgccgccgt ggcgccttcc gcgcagatgg
     1021 ccctcgacaa cgccgggatc aaggccgccg acctcggcgc cgtcaagacg cacaacccgt
     1081 tcgccgcgaa cgacatcgtc atggcgaagg cggtggggct cgacgcgaac gcgatgaaca
     1141 atttcggctc ctccctcatc ttcggccacc cgcaggcgcc cacgggcgcg cgtctcatga
     1201 tcgaggggat cgaggagctc gcggcgaagg ggggagggta cttgctcttc tccggctgcg
     1261 ccgcgggcga cactgcggcc tccatcgtgt tcaaggtcgg ctgagcgctt cggggagggt
     1321 ccggctgcgt cgcctcggag ggcggggctc cgttcgtggc tcgccgtgcg atgaacctgc
     1381 acggctgcgc tttacctcac ttcgcccccc ctcctgcggc gactccgcat gacctcctgt
     1441 cccgtgcgac ctccgtgttg tcttcacgtg tgtgaaaaaa tacatcaatc gttcacgtcg
     1501 cactctcccg ccgataccct cgagatcgcg cgggcgttgg gcgcggcgct tcgccccggc
     1561 gacgtcgtcg cgctgatggg ggacctggga gcgggaaaaa cgcttttctg caagggagtg
     1621 ggg
//
LOCUS       DATGYW010000496         3656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_313417, whole genome shotgun sequence.
ACCESSION   DATGYW010000496 DATGYW010000000
VERSION     DATGYW010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3656
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_313417"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..834
                     /locus_tag="VK429_06870"
     CDS             <1..834
                     /locus_tag="VK429_06870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014322344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLN91566.1"
                     /translation="TGGAALGPDVFKFFNAMGVNLKQIYGQTEISGISCIHREGDINF
                     DSVGKPIPETEIKLSDTGEILSRSPSVFLGYYKNPEETEKTLSEGWLHSGDAGYFTKD
                     GHLVVIDRVKDVMHLNDKTRFSPQFIENKLKFSPYIKECVCLGNQRDFIASMLCIDYP
                     NVGKWAESRRLSYTTYTDLAAKPEVLELLAKEVEKVNATLPETTRVKKFVPLYKELDA
                     DDDELTRTRKVRRAFVGERYKHVIEAMYAGENSIPIDATIKYQDGKTSRIKTLLTIRN
                     L"
     gene            848..1744
                     /locus_tag="VK429_06875"
     CDS             848..1744
                     /locus_tag="VK429_06875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN91567.1"
                     /translation="MTTQYLLQLVISGLVVGSIYSAVALGFVIIYKATRVVNFAQGEL
                     LMVGAYVCYAFLVQMHVPFWAALCLTIGFGLVLALIIERLILRPMIGEPAISIIMVTI
                     GLSLVLRSIVTAVWGTDILVYEPKLFPQETINIGGVPVSLEFVWCFILSILLLGLFSA
                     FFKFSKAGVAMRATAFNQQAAQSMGISVKFIFGLSWVISAVISGIGGVLIGNINGINT
                     SLYHFGLKVFPATILGGLDSILGAAIGGLVIGLLENLSDGLCKAYLDLSGVKEVAPYI
                     ILVVILMIKPYGLFGTKEIERV"
     gene            1746..2792
                     /locus_tag="VK429_06880"
     CDS             1746..2792
                     /locus_tag="VK429_06880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013886382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN91568.1"
                     /translation="MHYCGDFRTTYEKDIEILQTPTVRIGIAACLAFLVVFPFLVKGE
                     YLWVGLQILIAVIGAVGLNILTGYTGQISLGQGAFFGVGAYTTAYMTTKMGLSFWVGV
                     PAAGLITAAAGMVFGIPSLRLKGLYLAIATLASQFILEWVFLRWEPVTGGSFGIVVPR
                     PSIGGYVFDSDRSFYYLVLAITVVMVLFAVNIVRTRTGRAFMAIRDHYISAEIMGINL
                     FRYRILSFGISSFYAGVAGALLGHSLKFVTSEQFNLGMSVTYLAMIIIGGLGSILGAI
                     YGAIFMILLPKVLTILTGKLTLLIPGAAGLAIAMEEGVFGLIIIFFLIFEPDGLAHRW
                     KMIKAYWKLYPFSY"
     gene            2843..>3656
                     /locus_tag="VK429_06885"
     CDS             2843..>3656
                     /locus_tag="VK429_06885"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN91569.1"
                     /translation="MSKARGNEATNHEIREGKEKMKKTMKIASVVAVLAMVLTGVAFS
                     AETIKVGHLADLTGPTGDVGKPYAAGVQAYKNYINSKGGINGKQIEMQMFDYAYDKNK
                     AVNQYKKYKEDKVVAIEGWGTGDTEALTGFINADKIPYISASYSAHLTDAKKTPYNFF
                     CAADYTTALRAGLKYLKEGWKEKRAPKIVFIYPNHPYGIAPIKGGKEYAKELGFEVLG
                     DENVDLKAIEANSQLLSVKNKNADFAWIGGTTNSTAVILKDAKKLGLKTKFFS"
BASE COUNT          724 a         1123 c         1125 g          684 t
ORIGIN      
        1 accggcgggg cggcgctggg gcccgacgtc ttcaagttct tcaacgcgat gggcgtgaac
       61 ctcaagcaga tctacggcca gacggagatc tccggcatct cgtgcatcca ccgcgaaggc
      121 gacatcaact tcgactcggt cggcaagccg atccccgaga ccgagatcaa gctctccgac
      181 accggcgaga tcctgtcgcg ctccccgtcc gtcttcctcg gctattacaa gaatcccgag
      241 gagacggaaa agacgttgag cgaaggctgg ctccattcgg gcgacgcggg ctacttcacc
      301 aaggacggcc acctggtcgt gatcgaccgc gtgaaggacg tgatgcacct gaacgacaag
      361 acccggttct cgccgcagtt catcgagaac aagctgaagt tctccccata catcaaggag
      421 tgcgtctgtc tcgggaacca gcgcgacttc atcgcgtcga tgctctgcat cgactacccc
      481 aacgtgggga agtgggccga gagccgccgc ctctcctaca caacgtacac ggacctcgcc
      541 gcgaagccgg aggtgctcga actcctggcg aaggaggtcg aaaaggtgaa cgcgaccctc
      601 ccggagacga cgcgggtgaa aaaattcgtc ccgctctaca aggagctcga cgcggacgac
      661 gacgagctga cccgcacgcg caaggtccgc cgggcgttcg tcggggagcg gtacaagcac
      721 gtgatcgagg cgatgtacgc cggcgaaaac tccattccga tcgacgcgac gatcaagtac
      781 caggacggca agacgtcgcg gatcaagacg ctgctcacca tccgcaactt gtagggagac
      841 gaggcgaatg acgacgcaat acctgctgca gctcgtgatc agcggcctgg tcgttgggag
      901 catctactcg gcggtcgcgc tcgggttcgt gatcatctac aaggccaccc gggtggtgaa
      961 cttcgcccag ggggagctcc tcatggtggg ggcgtacgtc tgctacgcct tcctcgtcca
     1021 gatgcacgtc cccttctggg cggccctgtg cctgacgatc gggttcgggc tggtgcttgc
     1081 gctgatcatc gagcgcctga tcctgcgccc gatgatcgga gagccggcca tctccatcat
     1141 catggtcacc atcgggctct ccctggtcct gcgctccatc gtcaccgccg tctgggggac
     1201 cgacatcctc gtgtacgagc cgaagctctt cccccaggag acgatcaaca tcggcggggt
     1261 tccggtatcg ctcgaattcg tctggtgctt catcctgtcg atccttctcc tcggcctctt
     1321 ctccgccttc ttcaaattct cgaaggcggg cgtggcgatg cgcgccaccg ccttcaacca
     1381 gcaggccgcc cagtcgatgg ggatctccgt caagttcatc ttcgggctgt cgtgggtgat
     1441 ctccgccgtc atctccggga tcggcggggt gctgatcggg aacatcaacg ggatcaacac
     1501 ctccctgtac cacttcggtc tcaaggtctt cccggcaacg atcctcgggg ggctcgactc
     1561 gatcctcgga gccgccatcg gggggttggt catcggactg ctggagaacc tctccgacgg
     1621 tctttgcaag gcgtacctcg acctgagcgg cgtcaaggag gtcgccccgt acatcatcct
     1681 ggtcgtcatc ctgatgatca agccgtatgg gctgttcgga acaaaagaga tcgagagggt
     1741 ctgacatgca ttactgcggc gacttccgta ccacctacga gaaggacatc gagatcctcc
     1801 agacgccgac cgtcaggatc ggcatcgcgg catgtctcgc cttcctggtg gtcttcccgt
     1861 tcctggtgaa gggggagtac ctttgggtcg gcctccagat cctcatcgcg gtcatcgggg
     1921 ccgtgggact caacatcctg accgggtaca cggggcagat ctccctcggg cagggggcct
     1981 tcttcggcgt cggggcgtac acgacggcat atatgaccac caaaatgggg ctctccttct
     2041 gggtcggcgt tcccgcagcg gggctgatca ccgcggcggc cggaatggtc ttcggcatcc
     2101 cctcgctccg cctcaagggg ctgtacctcg ccatcgcaac gctggcgtcc cagttcatcc
     2161 tcgaatgggt cttcctgcgg tgggagccgg tgacgggcgg atcgttcggg atcgtcgtcc
     2221 cgcgcccctc gatcgggggg tacgtcttcg attcggaccg ctccttctac tacctggtcc
     2281 tcgcgatcac ggtcgtgatg gtgctgttcg ccgtcaacat cgtacggacc cggacgggcc
     2341 gggcgttcat ggcgatccgg gaccactaca tctcggcgga gatcatgggg atcaacctct
     2401 tccggtaccg gatcctctcc ttcgggatct cctccttcta cgccggtgtc gccggggcgt
     2461 tgctcgggca ttcgctgaaa ttcgtgacct cggagcagtt caacctcgga atgtccgtga
     2521 cctacctcgc gatgatcatc atcggcggcc tggggagcat cctcggggcg atctacggag
     2581 cgatcttcat gatcctgctc cccaaagtgt taaccatcct gacggggaag ctgacgctgc
     2641 tgatcccggg cgccgccggc ctcgcgatcg cgatggagga gggagtgttc ggcctcatca
     2701 ttatcttctt tctcatcttc gagcccgacg ggctcgcgca ccggtggaag atgatcaagg
     2761 cgtactggaa gttatacccg ttttcctact gaaaatgaaa aggaaaggag gacgcggcca
     2821 gggacgggag atcccattcg gcgtgtcgaa ggcgaggggc aacgaggcaa ccaaccacga
     2881 gatcagggag gggaaggaaa agatgaagaa gacgatgaag atcgcttcgg tggtcgcagt
     2941 gctggcgatg gttctgacgg gcgtcgcatt ttccgcggaa acgatcaagg tggggcatct
     3001 ggccgacctg accgggccca ccggggacgt cggcaagccg tacgccgcgg gcgtgcaggc
     3061 gtacaagaac tacatcaact cgaagggcgg catcaacggc aagcagatcg agatgcagat
     3121 gttcgactac gcctacgaca agaacaaggc ggtcaaccag tacaagaagt acaaggaaga
     3181 caaggtcgtg gcgatcgaag ggtggggcac gggcgacacc gaggcgttga cgggcttcat
     3241 caacgccgac aagatcccgt acatttccgc atcgtattcc gcccacctga ccgacgcgaa
     3301 gaagacaccg tacaacttct tctgcgccgc cgactacacc acggcgctgc gggcgggcct
     3361 caagtacctg aaggaaggct ggaaagagaa acgtgctccc aagatcgtct tcatctaccc
     3421 gaaccacccg tacggaatcg ctccgatcaa gggcggcaag gagtacgcga aggaactcgg
     3481 gttcgaggtt ctgggcgacg agaacgtcga cctgaaggcg atcgaggcga attcccagct
     3541 cctctccgtg aagaacaaga acgccgattt tgcctggatc ggcgggacga ctaattcgac
     3601 ggcggttatc ctgaaggacg cgaagaagct gggcctgaag acgaagttct tcagca
//
LOCUS       DATGYW010000497         1734 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_471828, whole genome shotgun sequence.
ACCESSION   DATGYW010000497 DATGYW010000000
VERSION     DATGYW010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_471828"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1465)
                     /gene="bamA"
                     /locus_tag="VK429_06890"
     CDS             complement(<1..1465)
                     /gene="bamA"
                     /locus_tag="VK429_06890"
                     /inference="COORDINATES: protein motif:HMM:TIGR03303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HLN91570.1"
                     /translation="MRRIFPFHRLVFLCAVLHLISGGSVGAAGFRVEAIDVRGATRVT
                     PDAIRKVMSTQVGQELDLEKVRQDVKAIYKMGYFRDVTFDTEEVPGGYRLTVIVSEKP
                     IVGAVLIEGNKDVDTSDLRAVLTVKERSLYQEEKVKESVNKLKEVCQNKGFIDASVEA
                     SVAEDSEGVLRVTFRVAEGPKLKIERIVITGNQYYPTDKILKTMDTSKKGIFSFITDS
                     GAFKKDVLENDIRKIEALYQNNGFLDSKISEPVVDRGKKGVILTIRVFEGRQYRVGQI
                     HFSGDSGIRESTLRKTVRLESGGLFDRETLLSDLLALTTLVNDEGYAQALVSPGVEKQ
                     KEYPVVDVTYRFERGTKFHFGKVEISGNTKTLDRVVRNNLDVADGQTYTATGLKTSKE
                     NLTRSSYFKDVKISTAPSTVPGVMDAKVEVQEGPTGTLSGGLGYSSVDKIFGVVNLTE
                     NNLFGRGWKASLNSQFGARRVLFSIDFRDPHFLDTDFS"
     gene            complement(1462..>1734)
                     /locus_tag="VK429_06895"
     CDS             complement(1462..>1734)
                     /locus_tag="VK429_06895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011480315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91571.1"
                     /translation="SERLAHRTGEISGGEQQRTAICRALVMEPSVLLADEPTGNLDRA
                     TASGVVDLLLSLNRARGLSLLMVTHNDQIAARLHRVIRIDDGRIAS"
BASE COUNT          297 a          567 c          508 g          362 t
ORIGIN      
        1 ggctgaagtc ggtgtccagg aaatgcggat cgcggaagtc gatgctgaac aggacccggc
       61 gcgccccgaa ctgggagttc agggacgcct tccaccccct gccgaagagg ttgttctcgg
      121 tcaaattgac cacgccgaag atcttgtcga ccgagctgta gccgagcccg cccgacaggg
      181 tcccggtcgg cccttcctgc acctcgacct tcgcgtccat cactcccggc accgtcgagg
      241 gggcggtgct gatcttcacg tccttgaaat acgacgaccg ggtcaggttc tccttgctcg
      301 ttttcagtcc cgtggccgtg taagtctgcc cgtccgcgac gtcgagattg ttacggacga
      361 cacggtccag cgtcttcgtg tttccggaga tctcgacttt cccgaagtgg aacttcgtcc
      421 cccgctcgaa ccggtacgtc acgtccacga ccgggtactc cttttgcttt tcaacccccg
      481 gggaaacgag tgcctgcgcg tacccttcgt cgttcacgag ggtggtgagg gcgagcaggt
      541 cggacaggag tgtctcccgg tcgaagagtc cgccgctttc tagcctcacc gtctttcgaa
      601 gcgtgctttc gcgaatgccg gagtccccgg agaagtggat ctgtccgacg cggtattggc
      661 gcccctcgaa gacccggatc gtgaggatca cacctttctt cccccggtcg acgaccggct
      721 cggagatctt tgagtcgagg aacccgttgt tctggtagag cgcctcgatc ttccggatgt
      781 cgttttcgag tacgtccttc ttgaaggccc ccgagtcggt gatgaaggag aagatcccct
      841 tcttcgaagt gtccatcgtc ttgagaatct tatccgtcgg gtagtactgg ttcccggtga
      901 tcacaatccg ttcgatcttc agcttcgggc cctcggcgac ccggaaggtc acccggagca
      961 cgccctcgga atcctcggcg acagacgcct caactgaggc gtcgataaag cctttattct
     1021 ggcaaacttc ttttaattta ttcaccgatt cctttacttt ttcctcctgg taaagggacc
     1081 gctccttgac ggtcaggacg gcacgaaggt cggatgtatc cacgtccttg ttcccctcga
     1141 tcaggaccgc gccgacgatc ggcttctcgg agacgatcac cgtaaggcga tacccgccgg
     1201 ggacctcctc cgtgtcgaag gtgacatcgc ggaaataccc catcttgtag atcgccttga
     1261 cgtcctgccg gaccttctcc aggtcaagct cctgtccgac ctgcgtgctc atgactttcc
     1321 gtatcgcgtc cggggtgacg cgggtcgccc cccggacgtc gatcgcctcc acccggaacc
     1381 cggcggctcc cacgctcccg ccgctgatca ggtggaggac cgcgcacagg aacaccaggc
     1441 ggtggaacgg gaaaatccgc ctcaagaggc gatcctcccg tcgtcgatcc ggatcacgcg
     1501 atgaaggcgg gccgcgatct ggtcgttgtg cgtcaccatg agcagggaga gccccctcgc
     1561 ccggttgagc gacaggagaa ggtcgacaac gccgctggcc gtcgcccgat cgaggttccc
     1621 ggtcggttca tccgccagca ggaccgacgg ctccatcacg agcgcacggc agatcgccgt
     1681 gcgctgctgc tcgcccccgg agatctcccc ggtgcggtgc gcgagacgtt ccga
//
LOCUS       DATGYW010000498         2401 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_348537, whole genome shotgun sequence.
ACCESSION   DATGYW010000498 DATGYW010000000
VERSION     DATGYW010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2401
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348537"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..715)
                     /locus_tag="VK429_06900"
     CDS             complement(35..715)
                     /locus_tag="VK429_06900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91572.1"
                     /translation="MRVLLYSAIGIPLLIADAVLLWALPAEMASRLTIAQGVILLFGA
                     LVYLGLHFLLRKPERMYLWGHEFTHLFVAKLFLRHVHGFHITSRSGGKVVIDRTNVAI
                     DLAPYALPFYNVIALLPVTLIAGGPPYARKIYLGAAAFLFAMHLCFSAEGFIDGQPDV
                     RRSGRIFSLAIVLLLLMLWTPILAAPGTHGGFSGLSDFYRVWLHSGVKAVLALSKFIR
                     SLLGGQFL"
     gene            857..1054
                     /locus_tag="VK429_06905"
     CDS             857..1054
                     /locus_tag="VK429_06905"
                     /inference="COORDINATES: protein motif:HMM:NF024139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLN91573.1"
                     /translation="MNVEGKQSILKTRDLAILLDLSPDVVNDMARRGHLKGFKSGNQW
                     RFRRRDVERYIERVKRMAAPG"
     gene            complement(1092..1610)
                     /locus_tag="VK429_06910"
     CDS             complement(1092..1610)
                     /locus_tag="VK429_06910"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HLN91574.1"
                     /translation="MARKHTVPALAIFMVVILLGSGISVASPNGAGKPIATQVSTFAD
                     RSKIPASGKQGPPAEAATITGRWKQGEGLFAKRCQSCHGPRGTGKVKNPGSDDGTVPP
                     LNPIDAALASKTPSAFAANIDRYIQHGSIPDGPKPELFMPDWGDSQALSQEEIADVEA
                     YVMRLNGVRRVK"
     gene            complement(1918..>2401)
                     /locus_tag="VK429_06915"
     CDS             complement(1918..>2401)
                     /locus_tag="VK429_06915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007160230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLN91575.1"
                     /translation="FAKAQHVAEKHGWTRFVSMQNHYNLLYREEEREMVPLCRDQGVG
                     LIPWSPLARGHLARAPEAKGTKRSETDRFGKTLYLSMAEADHRVLVAVDKLAKTRNLP
                     HAQIALAWLLRNDAVTAPIVGATKMEHLETAVGALGCQLSREEVTELEAPYVAHPVVP
                     "
BASE COUNT          498 a          705 c          721 g          477 t
ORIGIN      
        1 accctttcct tccgttgtca tcatgaagac aagtttacag gaattgtccc ccaaggaggg
       61 agcggatgaa cttcgaaagg gcgagcaccg ccttcacccc actgtggagc cacacccggt
      121 aaaaatcgga gaggccggaa aaaccgccat gggtccccgg cgccgcgagg atcggcgtcc
      181 agagcatcaa gaggagaaga acgatcgcca gggagaagat ccgtccgctg cgccgcacat
      241 ccggttgccc gtcgatgaat ccctccgcgg aaaagcagag gtgcatcgcg aacaggaacg
      301 ctgccgcgcc aaggtagatc ttccttgcgt aagggggccc ccccgcgatc agggtcaccg
      361 gaaggagcgc gatgacgttg tagaacggca gtgcatacgg ggcgaggtcg atcgccacgt
      421 tcgtacggtc gatcacgacc tttcccccgg agcgcgaggt gatgtggaat ccgtgaacgt
      481 ggcggaggaa gagttttgcg acgaagagat gcgtgaactc gtggccccag agatacatcc
      541 gctcgggctt ccgcagaagg aaatgcaggc ccagatagac gagagccccg aaaagaagga
      601 tcaccccctg ggcaatcgta agccggctcg ccatctccgc cgggagggcc cagagaagaa
      661 cggcgtctgc gatcagtagt ggaattccga tcgcggaata gagcaagact ctcatgccca
      721 ggtccccgca gtccgggtaa gttcatggaa taaaatgata atatatccct tcccgccagt
      781 aaaaaacctg tttacataaa tataacgtta tgttattttg cctaacgaat cgtcctgccg
      841 caatgtggag gggcccatga atgtcgaggg caaacagagc atcctcaaga cacgcgacct
      901 ggcgatcctt ctcgatctca gtcccgatgt cgtgaacgac atggcgcggc gcgggcacct
      961 gaaaggattc aagagcggaa accagtggcg attccggcgg cgggacgtcg agcggtatat
     1021 cgaacgggtc aagaggatgg cggccccggg gtgacttgaa ctcatcaact gaaggcaccc
     1081 tctttgcgca gctatttcac ccttcgaacc ccgttgaggc gcatgacgta cgcttcgacg
     1141 tccgcgatct cctcttggga gagggcttgg ctgtcccccc aatccggcat gaagagctcc
     1201 ggtttgggcc cgtcgggaat ggagccgtgc tggatgtatc ggtcgatgtt tgctgcaaaa
     1261 gcggaagggg ttttacttgc gagggccgcg tcgatcggat tgagcggcgg gacggttccg
     1321 tcgtcggagc cgggattttt caccttgccg gtgccccggg ggccgtggca ggactgacac
     1381 cgtttcgcga aaaggccctc cccctgtttc catcttcccg tgatcgtggc ggcttcggca
     1441 ggtggaccct gtttgccgga cgcggggatc ttggatcgat ctgcgaaggt cgacacctgg
     1501 gtagcgatag gcttcccggc tccgttcggg ctcgccacgg agattcccga tcccaagaga
     1561 atgaccacca tgaagatcgc aagagcgggt acggtgtgtt ttcttgccat gctggatccc
     1621 cccttcgctg gaaacgaacg cgatgttcgg cggaaagccc gccaccgctg ctccagaaag
     1681 ctatgatacc ccatgtcttt tttctcccgc acgcactttc ttccctgcag gttgatgtat
     1741 caggagtatg ccgggatttg attttgatct acgaaaatgg gttacggttt ataccgtaac
     1801 ccattgttat cattggtgcc accggggtga ctcgaccacc ctgccaaagg tttgggagcc
     1861 ttaaaacctg ttgatatgaa gacggccgac aggtcactcc cgattgaaaa cccgagccta
     1921 tggcacgacg gggtgtgcca cgtacggcgc ctccagttcc gtgacttcct ctctggacag
     1981 ttgacagccg agcgccccca ccgccgtctc gaggtgctcc atcttcgtcg cgcccacaat
     2041 gggggccgtc acggcgtcat tccggaggag ccaggccagg gcgatctggg cgtgaggcag
     2101 gttgcgcgtc ttcgccaatt tgtcgaccgc gacaagcact cgatggtctg cctcggccat
     2161 cgacaaatac agcgtcttgc cgaagcgatc tgtctccgac cgcttcgttc ccttcgcctc
     2221 cggagcgcgc gccaagtgtc ctcgcgcgag tggactccac gggatcaacc cgactccctg
     2281 gtcgcggcag aggggcacca tctcgcgctc ctcctcgcga tagaggagat tgtagtggtt
     2341 ctgcatcgac acgaagcgcg tccatccgtg tttctcggcc acatgctgcg ccttggcgaa
     2401 t
//
LOCUS       DATGYW010000499         1750 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_38010, whole genome shotgun sequence.
ACCESSION   DATGYW010000499 DATGYW010000000
VERSION     DATGYW010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1750
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38010"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..683)
                     /locus_tag="VK429_06920"
     CDS             complement(<1..683)
                     /locus_tag="VK429_06920"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HLN91576.1"
                     /translation="MSRRAVGLFLLSVAVIYYTGLGTLPLLEPDEGRYAEIPREMLVR
                     GDFVTPHLNGVVYLEKPPLFYWGNALSFALFGESEFSARLFTATVSIAGVLLTYWMGA
                     VLAGPRSGLFSAMVLCTSLYHYVIGRINTLDMTLAVAMIVAIFPAFLHLSGKRESRGY
                     LLLSYAGAALAFLAKGLIGIVFPAAILLLWMLLSKRHREIGKAISLPGLALFLAIALP
                     WVILVQRANP"
     gene            830..1330
                     /locus_tag="VK429_06925"
     CDS             830..1330
                     /locus_tag="VK429_06925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HLN91577.1"
                     /translation="MRRYASTVVVLLAATGILFSEFPLATAADVVAAPTGVTIPTGYR
                     DWQVIAPSQRDDTDEIRVILGNEIAMKAFRANTLPFPDGTILAKLAWKRVASTEFPKT
                     FVPGVAPRIEFMVKDSKKYASTGGWGFGRFIDGKPADEKVHATCFPCHLANVKNHDFV
                     FTRYAP"
     gene            1357..>1750
                     /locus_tag="VK429_06930"
     CDS             1357..>1750
                     /locus_tag="VK429_06930"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLN91578.1"
                     /translation="MGFHVTPLRSGSSGNLTLVEHAGTVLLVDAGLPSQRGLVAALSE
                     ADRAWDDVDALLVSHLHSDHVNGSAVGCCARFEIPIHLHRKNLDGFSKKVLSRSPGLC
                     PVRPFTDGESFSIGAIGIEPFRVPHDARG"
BASE COUNT          319 a          559 c          596 g          276 t
ORIGIN      
        1 gggttcgcgc gctgcacgag gatcacccac ggcagggcga tcgcaaggaa cagggcgagc
       61 ccggggaggg agatcgcctt cccgatctcc cggtgacgct tcgacagcag catccagagc
      121 aggaggatcg ccgcggggaa gacgatcccg atcagtccct tcgcgaggaa tgcgagggcg
      181 gcgcccgcgt acgagaggag caggtacccc cggctttccc gcttccccga caggtggagg
      241 aaggcgggga agatcgcgac gatcatcgcg acggcgagcg tcatgtcgag ggtgttgatc
      301 cgcccgatga cgtagtggta gagggaggtg caaagcacca tggcggagaa aaggccggac
      361 cggggacccg cgagaaccgc ccccatccag tacgtgagga gcacccccgc gatcgaaacg
      421 gtagcggtga agagtcgcgc ggagaactcg ctctccccga agagggcgaa ggagagcgcg
      481 ttcccccagt agaagagcgg gggtttctcg aggtacacca cgccgttcag gtgcggcgtg
      541 acgaagtcgc cccgaacgag catctccctc gggatctccg cgtaccgtcc ctcgtcgggc
      601 tccaggagcg ggagggttcc caacccggtg tagtagatga ccgcgacgga caggaggaag
      661 aggccgacgg cgcgacggct caaggggcgt ctccgtagtg cgctactggc ggcatgcccg
      721 ggattatact ccatcctccg gcggacgaat tcgccgatcc gtgatccgcg ggacccggtc
      781 tggtataata cccggcgacg ttccatcccg atccgaaaag gaggatgcca tgcgccgcta
      841 cgcctcgacg gtcgttgtcc tgctcgccgc aaccgggatt ctgttttccg agttcccact
      901 ggccaccgcc gcggatgtcg ttgccgcccc gaccggggtg acgatcccga cggggtaccg
      961 ggactggcag gtcatcgcgc cgtcccagag ggatgacacg gatgagatcc gggtgatcct
     1021 cggcaatgag atcgccatga aggcgttccg ggcgaatacg ctcccgttcc cggacggcac
     1081 gatcctcgcg aaattggcgt ggaagcgcgt ggcgtccacg gagttcccaa agaccttcgt
     1141 cccgggcgtg gcgccccgga tcgagttcat ggtgaaggat tcgaagaaat acgcctccac
     1201 cggcgggtgg ggatttggcc ggttcatcga cggcaaaccc gcggacgaga aggtgcatgc
     1261 cacgtgtttc ccgtgccacc tggccaacgt caagaatcac gacttcgtct tcacacggta
     1321 cgcgccgtaa cgacgggggg gggagaacct ttccacgtgg gatttcacgt caccccgctg
     1381 cgcagcggaa gttccgggaa cctgacgctc gtggagcacg cggggaccgt cctgctggtc
     1441 gacgcggggt tgccgtccca gcggggactc gtggccgccc tctcggaggc cgaccgcgcc
     1501 tgggacgacg tggacgcgct gctggtctcc cacctccaca gcgaccatgt gaacggctcc
     1561 gcggtgggat gctgcgcccg gttcgagatt ccgatccacc tccaccggaa aaaccttgac
     1621 gggttctcga agaaggttct ctcccggtcc cccggtctct gccctgtccg ccccttcacg
     1681 gacggagagt cgttctcgat cggggcgatc gggatcgaac cgttccgcgt tccccacgac
     1741 gcacgggggg
//
LOCUS       DATGYW010000500         1734 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_348659, whole genome shotgun sequence.
ACCESSION   DATGYW010000500 DATGYW010000000
VERSION     DATGYW010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348659"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..575
                     /locus_tag="VK429_06935"
     CDS             <1..575
                     /locus_tag="VK429_06935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN91579.1"
                     /translation="TGKSSCVKGLLPVFSPRGLRIVELSRWDLFAFPKIVGQLRELPF
                     RFLLFCDDLSFDEGEADFRGLKTLLDGGVEERPENVLIYATSNRRHLMPERRVALGSE
                     DEIHPEEAVSEKLSLSDRFGLQLGFYRFDQETYLAVVESYARRMRLPADPATLREEAL
                     RWALSGGSRSGRTAKQFIDDLAGRLGMRSP"
     regulatory      642..710
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01734"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Fluoride riboswitches increase expression of
                     downstream genes that help mitigate the toxic effects of
                     very high levels of fluoride; They are found in a wide
                     variety of bacteria and archaea; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="fluoride"
                     /db_xref="RFAM:RF01734"
     gene            772..1146
                     /gene="crcB"
                     /locus_tag="VK429_06940"
     CDS             772..1146
                     /gene="crcB"
                     /locus_tag="VK429_06940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1903425 - fluoride transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:1903424 - fluoride transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HLN91580.1"
                     /translation="MTAVLYVALFGAMGCLARYFFSGWVYDLIGRTLPYGTLAVNVIG
                     AFLIGLVMEFSLRCTAVSPEMRIGLTIGFLGGFTTFSTFSYETFRLLESAQLPEALAN
                     VLLSVTACLAFTFLGIIAARHL"
     gene            1177..1521
                     /locus_tag="VK429_06945"
     CDS             1177..1521
                     /locus_tag="VK429_06945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF190 domain-containing protein"
                     /protein_id="HLN91581.1"
                     /translation="MPKLVGENVLMRIFIGEGDKFEGRPLHEALVELLKKERFHGATV
                     LRGVAGFGAHSVYHTDKILRLSRDLPMIVEVVDTQENVDRVMPRLDEMIAGGMITIEK
                     VKVMRYTHKHAE"
     gene            1550..>1734
                     /locus_tag="VK429_06950"
     CDS             1550..>1734
                     /locus_tag="VK429_06950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91582.1"
                     /translation="MNLSGTVWRAGAICRRFRIDSLAPQLAACEEMLGDGGVVDVAVL
                     GQFKAGKSSFLNALIGA"
BASE COUNT          270 a          547 c          596 g          321 t
ORIGIN      
        1 gcaccgggaa gtcgtcgtgc gtgaaaggtc tgctccccgt cttcagtccg cggggcctgc
       61 ggatcgtgga gctctcccgg tgggacctgt tcgctttccc gaagatcgtc gggcagctcc
      121 gggaactccc gttccggttc ctcctcttct gcgacgacct gtcgttcgac gagggggagg
      181 ccgacttccg ggggctcaag acgttgctgg acggcggcgt ggaggagcgc cctgagaacg
      241 tgctgatcta cgccacctcg aaccggcggc acctgatgcc cgaacgccgg gtcgcgctgg
      301 gctcggagga cgagatccat ccggaggagg cggtctcgga gaagctctcc ctctccgacc
      361 ggttcggcct gcagctcggg ttctaccggt tcgaccagga gacgtacctc gccgtcgtcg
      421 aatcgtacgc gcggcggatg cgcctccccg ccgatccggc gacgcttcgc gaagaggcgc
      481 ttcgctgggc gctctccggc ggctcccgca gcgggcgcac ggcgaagcag ttcatcgacg
      541 acctcgcggg ccgcctcggg atgcgatcgc cctgacaggc ggtgcgcccc gtgtccatcc
      601 ggcgtcttcc catccgccgg accgctgtgg tatgtaagga aaagacaccc ggcgatggag
      661 ttcgccgtga accgcctccc cgattcgagg ctgatgactc ctacccgaca cccgtggggc
      721 aggagttttt tttgtccggg gtgccttacg atccaagggg ggattcctcg gatgaccgcc
      781 gtgttgtacg tcgccctctt cggtgcgatg gggtgcctgg cgcggtactt cttctccggc
      841 tgggtatacg acctgatcgg tcgcaccttg ccgtacggca ccctcgccgt caatgtgatc
      901 ggcgccttcc tgatcgggct ggtcatggag ttcagcctgc ggtgcacggc cgtttccccc
      961 gagatgcgga tcggcctgac gatcggcttc ctgggggggt tcaccacctt ctcgaccttc
     1021 agctacgaga cgttccgcct gctcgagagc gcccagctgc cggaggcact ggcgaacgtc
     1081 ctcctgagcg tcaccgcctg cctggcattc acgtttctcg gaatcatcgc cgcgcgccac
     1141 ctgtaaggag aggccctacc ttaaaggagg aggaagatgc cgaagctcgt cggggagaac
     1201 gtcctgatgc ggatcttcat cggggagggg gacaagttcg aggggcgtcc cctgcacgag
     1261 gcgctggtgg aactcctgaa gaaggaacgg tttcacggcg ccacggtgct gcgcggcgtg
     1321 gcggggttcg gcgcacacag cgtctaccac accgacaaga tcctccggct gtcgcgcgat
     1381 ctcccgatga tcgtggaggt ggtcgacacg caggagaacg tcgaccgggt gatgccgaga
     1441 ctcgacgaga tgatcgccgg cgggatgatc accatcgaga aggtcaaggt gatgcggtac
     1501 acccacaaac acgcggagta agggagtctg gcagggagga tctcccggga tgaatctgtc
     1561 cggaaccgtg tggcgcgccg gcgcgatctg ccggcgtttc cggatcgact cccttgcgcc
     1621 gcagcttgcg gcgtgcgagg agatgctggg ggacggcggc gtggtggacg tggccgtgct
     1681 cgggcagttc aaggcgggga agagctcgtt ccttaacgcc ctcatcggag cgtt
//
LOCUS       DATGYW010000501         1662 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_419452, whole genome shotgun sequence.
ACCESSION   DATGYW010000501 DATGYW010000000
VERSION     DATGYW010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1662)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1662)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419452"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..672)
                     /locus_tag="VK429_06955"
     CDS             complement(55..672)
                     /locus_tag="VK429_06955"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HLN91583.1"
                     /translation="MAEERYYKHDGFERFTHWTHTLDTVILVLSGMQIHYPGFSVFGA
                     MQNARFLHLVSAYIFVAIGVYHTYIFFALGKHRIAMPGLFDFSEVGPILKYYLHISRE
                     KPAYEKYNVLQKYGYFLLFAVSVLQTLLGFALYPYFLPGVFSFVFAIFGDAVQIRIWH
                     TTIMWLFISFTALHVYLVVTEDRRMVQAMIDGYYYRKATEGKTQG"
     gene            complement(685..>1662)
                     /locus_tag="VK429_06960"
     CDS             complement(685..>1662)
                     /locus_tag="VK429_06960"
                     /inference="COORDINATES: protein motif:HMM:NF012592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HLN91584.1"
                     /translation="GTTFVPTVEVMDNVLWRLKRLQHWVDTVFLPDVLAIAPYYIKYA
                     GIGKGVGNYLSWGVFDDPSFDPKKRLLPRGAIFDGKLAVADVDGKEVKEYVDYSWFTA
                     DSGNRSPMEGKTEPKFTKMGDTKYTWLKAPRIKDHPMEVGALSRVLVAYVSGDPKVKS
                     MVDGTLSALGQAGHPEVLLSVLGRIAARVLETKLVIDGMLDWTGELLANLKAGKTQMY
                     ALNDVPEKGQGMGLWEAPRGALAHYNVIEGKKLKNYQCVVPTTWNASPRDHKGVRGPI
                     EEALVGTPVLDPDKPLEVLRVVHSFDPCIACAVHIIHPVTNEVKAFRVV"
BASE COUNT          291 a          550 c          524 g          297 t
ORIGIN      
        1 ccggagggaa gaatctccgg gcggcccgga gggaccgggc gcggcttgta ccttctaccc
       61 ttgggttttt ccttccgtgg ccttccggta gtaatacccg tcgatcatcg cctggaccat
      121 ccgccggtcc tccgtcacga ccaggtagac gtgcagggcc gtgaaggaga tgaaaagcca
      181 catgatcgtg gtgtgccaga ttcggatctg caccgcatcg ccgaagatcg cgaacacgaa
      241 ggagaacacc cccggcagga agtaggggta gagggcgaac cccaggaggg tctggaggac
      301 ggacaccgcg aagagcagga agtagccgta cttctgcagg acgttgtact tctcgtacgc
      361 cggcttctcg cggctgatgt ggaggtagta cttcaggatc ggccccacct ccgagaagtc
      421 gaagagcccc ggcatggcga tccggtgctt gccgagggcg aaaaagatgt acgtgtggta
      481 cacaccgatg gccacgaaga tgtatgcgga gaccaggtgg aggaaccggg cgttctgcat
      541 cgccccgaag acggagaatc cggggtagtg gatctgcatc cccgagagga ccaggatcac
      601 cgtgtcaagc gtatgggtcc agtgggtgaa gcgctcgaac ccgtcgtgct tgtagtaccg
      661 ctcttccgcc atgtcccccc cgcgtcagac gacccggaac gccttcactt cgttggtgac
      721 cgggtggatg atgtgcactg cgcaggcgat gcacgggtcg aaggagtgga ccacgcgcag
      781 cacctccagc ggcttgtcgg ggtccagcac cggcgtcccc accagcgcct cctcgatcgg
      841 cccgcgaacc cccttgtggt cccgcggcga ggcgttccac gtggtgggca ccacgcactg
      901 gtaattcttc agcttcttcc cctcgatcac gttgtagtgg gcgagcgccc cgcgaggggc
      961 ctcccacagc cccatcccct gccctttctc ggggacgtcg ttcagcgcgt acatctgcgt
     1021 cttccccgcc ttgaggttcg cgaggagctc gccggtccag tccagcatcc cgtcgatcac
     1081 cagcttcgtc tcgagcaccc gcgcggcgat ccggcccagc accgacagga gcacctcggg
     1141 gtgacccgcc tggcccagtg ccgaaagcgt gccgtccacc atcgacttga ccttggggtc
     1201 ccccgacacg taggcgacca gcacccgcga gagggcgccc acctccatcg ggtggtcctt
     1261 gatccgcggg gccttgagcc acgtgtattt cgtgtccccc atcttcgtga acttcggctc
     1321 cgtcttcccc tccatcgggc tccggttccc ggagtcggcg gtgaaccagg agtaatcgac
     1381 gtactccttc acctccttcc cgtcgacgtc ggccacggcg agcttgccgt cgaagatcgc
     1441 gccgcgcggg aggagccgct tcttcgggtc gaacgacggg tcgtcgaaga cgccccagga
     1501 gaggtagttc cccacaccct tcccgatccc cgcgtacttg atgtagtacg gcgcgatcgc
     1561 gagaacgtcg ggcaggaaga cggtgtccac ccagtgctgg agcctcttga gccgccagag
     1621 gacgttgtcc atcacctcga cggtggggac gaaggtcgtc cc
//
LOCUS       DATGYW010000502         2678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_512127, whole genome shotgun sequence.
ACCESSION   DATGYW010000502 DATGYW010000000
VERSION     DATGYW010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512127"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..235)
                     /locus_tag="VK429_06965"
     CDS             complement(<1..235)
                     /locus_tag="VK429_06965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91585.1"
                     /translation="MNDKRKDRRDAELDRYFALARQAPPDISGVERNFETRVMARIRE
                     VREPWYAWAWRLAPIFIALTILLAGWSLSYSPLH"
     gene            complement(225..779)
                     /locus_tag="VK429_06970"
     CDS             complement(225..779)
                     /locus_tag="VK429_06970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011736519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLN91586.1"
                     /translation="MAVPDEDAVLVRSAIGGDDEAFTELVRRHKGTVLRSASRFARNP
                     EELEDLGQETFLRVYRDLRSFRGDAPFGHWLSRITVRVCYDALRKRRREEKDVSLEVL
                     AAPVADPSTGNGPSAQLARMILDQAMSRLKPEDRLVITLFELEDRSVREVAVLTGWSE
                     TRVKVRAFRARQALKRHIGGDDER"
     gene            complement(804..1331)
                     /locus_tag="VK429_06975"
     CDS             complement(804..1331)
                     /locus_tag="VK429_06975"
                     /inference="COORDINATES: protein motif:HMM:NF025173.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HLN91587.1"
                     /translation="MKTFHKGFTALVLLTAVAVGATMVSGNAWADRGGDGGGRCAGEG
                     RDGGWRGHGQEGDRLTKALDLSKEQTEQVKAIFLKHRDATAPLRKEMVSERRELRKLI
                     QSDKLDEAAIREQVKKIAATDGDLAVRRAKMSQEVRTVLTPEQIRKFRALQEKRDQRV
                     DEMMNRGQERKSKGE"
     gene            complement(1840..>2678)
                     /locus_tag="VK429_06980"
     CDS             complement(1840..>2678)
                     /locus_tag="VK429_06980"
                     /inference="COORDINATES: protein motif:HMM:NF024423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HLN91588.1"
                     /translation="QDHFLDPEDTVERRILTAAHFYATRWEFLIVERANPGGYEIDEI
                     RADLDAKVAGFHDLEGMALLASERRFRNFIDLCGQLRFQSRWAHLHRIPKTSVLGHSL
                     YVAILSYLFSLEIKACPRRCVNNYITGLFHDLPEVLTRDIISPVKRSVEGLSELIKGY
                     EKERMDQEVYVLLPEKWHAEFGMYSEREFENFATVDGVLTPVSAADLQEKYNEDVYNP
                     KDGELVKRADHLAAFVEAYAGIRNGSTSQDLQYARVKIGTQEAQAHYLGLHFGEIYSD
                     FD"
BASE COUNT          462 a          917 c          791 g          508 t
ORIGIN      
        1 gatgcagcgg cgaataggat aggctccacc ccgcgagcag tatggtaagc gcgatgaaga
       61 tcggagccag ccgccacgcc caggcatacc aaggttcccg tacctcgcgg atcctcgcca
      121 tcacgcgcgt ctcgaagttt cgttcgaccc cggagatgtc cgggggtgcc tgccgcgcca
      181 gtgcgaaata ccggtcgagt tccgcgtccc tccggtcctt tcgtttatcg ttcatcgtct
      241 cccccgatat gccgtttcaa tgcctgccgc gcgcggaaag cgcgcacctt cacccgcgtt
      301 tcgctccacc ccgtcaacac cgccacttcc cggaccgacc ggtcctctag ttcgaacagc
      361 gtgatcacca gccggtcctc cggtttgagg cgcgacatcg cctggtcgag gatcatgcgg
      421 gccaattggg cggaagggcc gtttcccgtg gaagggtccg cgaccggcgc ggccaggacc
      481 tccagcgaaa catccttctc ctcccggcgt cgtttccgta gcgcgtcgta acatacgcgc
      541 accgtgatcc gcgacagcca atgcccgaaa ggggcgtcgc cgcgaaagga gcggaggtcc
      601 cggtagaccc tcaggaacgt ctcctgtccg agatcctcca actcctcggg attgcgcgcg
      661 aagcgcgagg cgctgcgaag gaccgtcccc ttgtgtcgac gcaccagctc cgtaaacgcc
      721 tcgtcgtcgc ctccgatcgc ggagcggacg agcacagcat cctcgtccgg taccgccatc
      781 ggcaccccca aagcgtacaa gcactattct cccttcgact tcctttcctg cccgcggttc
      841 atcatctcgt cgacccgctg gtcccgcttt tcctgcaagg cccggaactt ccggatctgc
      901 tcgggtgtca gtaccgtccg cacttcctgg gacatcttcg cccggcggac ggcgagatcc
      961 ccgtctgtcg cggcgatctt cttcacctgc tcccggatgg ccgcctcgtc cagcttgtcc
     1021 gactggatca acttccgcaa ttcccgccgc tcggacacca tctcctttcg aagcggagcg
     1081 gtcgcgtcac gatgtttcag gaaaatggcc ttgacctgct ccgtttgctc cttggacagg
     1141 tcgagcgcct tcgtcagccg gtcgccttcc tgaccgtgcc ccctccaccc gccatcccgt
     1201 ccttcgcctg cgcaccgtcc gccgccatct ccgccacgat cggcccatgc gtttccggaa
     1261 accatcgtcg cccccacggc aaccgccgtg aggaggacca gcgcggtaaa tcccttgtga
     1321 aatgttttca tcgctccctc ctggatcggc cgttttcaat cggccatttc ctttaaaagg
     1381 cgtcaggccg atgggaaagg ttaccacagg gccgacgcgt ccctgccgcc tcccaacgcc
     1441 tcgacgagcg acgttcgcgg ctctcgttcc tgaaaggtct tgggaaatct cattctttgg
     1501 gaagcagcag gggaaatccc gcgatataat gcgtgaaagc gggatcgtgg tcggcgcctc
     1561 ggtcgcctgc ctggcatggt ggcgggacag caaggcgcaa tctgctgatc tggagaaagc
     1621 gcacgttctg aaccgtctag ccacggatcg aacgcccccg accgctcggc ggccggagtt
     1681 gtgaagaaga agccagagcc gcagtttaca ctgtcaattc cgtcagccag agatcgtgca
     1741 ggttgcagaa gctcgtggcc caaagcgcgc ccttgaagcc cacgggacga acggcgaacg
     1801 ccaccatgat ccaaccgaac cgggtatgaa gggaaccgct tagtcgaagt cggagtagat
     1861 ctccccgaag tggagcccca agtagtgggc ctgcgcctcc tgggtaccta tcttgacccg
     1921 cgcatactgc aggtcctggc tggtgctgcc gttgcggatc cccgcgtacg cctcgacgaa
     1981 ggcggcgagg tggtcggcgc gcttgaccag ctccccgtcc ttcgggttgt agacgtcctc
     2041 gttgtacttc tcctgcagat ccgcggcgga caccggggtc agcaccccgt ccaccgtggc
     2101 gaagttctcg aactcgcgct cggagtacat cccgaactcg gcgtgccact tctcgggcag
     2161 cagcacgtac acctcctggt ccatcctctc cttctcgtac cctttgatca gctcgctcaa
     2221 cccctccacg gaccgcttca cgggagagat gatgtcgcgg gtgagcactt ccggcaggtc
     2281 gtggaacagc ccggtgatgt agttgttgac gcaccgccgc gggcacgcct tgatctccag
     2341 ggagaacagg tacgagagga tcgcgacgta gagggagtgg ccgaggacgg aggtcttcgg
     2401 gatccggtgg aggtgagccc agcgggactg gaaccgcagc tgtccgcaca ggtcgatgaa
     2461 gttgcggaag cggcgctccg aggcgaggag cgccatcccc tccaggtcgt ggaatccggc
     2521 gaccttcgcg tcgaggtccg cgcggatctc gtcgatctcg tacccgccgg ggttcgcccg
     2581 ctcgacgatc aggaactccc accgggtcgc gtagaagtgg gcggcggtga ggatccgcct
     2641 ctccaccgta tcctccggat cgagaaagtg gtcctggt
//
LOCUS       DATGYW010000503         3223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_139922, whole genome shotgun sequence.
ACCESSION   DATGYW010000503 DATGYW010000000
VERSION     DATGYW010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3223
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_139922"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..413
                     /locus_tag="VK429_06985"
     CDS             <1..413
                     /locus_tag="VK429_06985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011416235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HLN91589.1"
                     /translation="DALTPGRVGYELLFVAFIIFFCYFYTAVTFNPVDVADNMKKYGG
                     FVPGIRPGKKTAEYIDKILTRITLGGAIYVSVICVLPSILIARFNVPFYFGGTGLLIV
                     VGVAMDTVQQIESHLITRHYEGFLKKGQMKGRRG"
     gene            421..1062
                     /locus_tag="VK429_06990"
     CDS             421..1062
                     /locus_tag="VK429_06990"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012529387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HLN91590.1"
                     /translation="MGIILLGPPGAGKGTQAKKLTQAFAIPQISTGDMLRAAVKNGTE
                     LGKKAKAFMDAGGLVPDEVVIGIVKERLAEPDCGKGFILDGFPRTIPQAEALDRVTKE
                     LGKEIRFVLSLEVDQKDLMERLCGRRTCTGCGAMYHVKFNPPKVAGKCDKCGTALIQR
                     DDDKEETITNRLANYNKATAPLLDYYRDTGKIRSVMASGEIDAIYAGIVKILR"
     gene            1066..1815
                     /gene="map"
                     /locus_tag="VK429_06995"
     CDS             1066..1815
                     /gene="map"
                     /locus_tag="VK429_06995"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013259707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HLN91591.1"
                     /translation="MILVKSPREIEVMRQAGAIVGRFFEEVRPLILPGVSTWDLESFA
                     DHFIARNGVRSAFKGYMGYPAHLCASINEEVVHGIPSRNRVVREGDLLSIDFGIVREG
                     FYGDAAKTFPVGAVNGVSSRLLAATERSLSAGIDEVRPGNRLGDVSAAVQETVEAEGF
                     SVVRDFVGHGIGRSLHEDPQIPNFGKRGIGPKLLPGMILAIEPMVNAGGWPVEVLADG
                     WTVVTRDRSRSAHFEHTVAVTEDGHRILSLP"
     gene            1853..2071
                     /gene="infA"
                     /locus_tag="VK429_07000"
     CDS             1853..2071
                     /gene="infA"
                     /locus_tag="VK429_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012611021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HLN91592.1"
                     /translation="MAKEEAIEIEGTVIEPLPNAMFRVELDNKMRVLAHISGKMRMHF
                     IKILPGDRVTVQLTPYDLTRGRITYRSK"
     gene            2085..2198
                     /gene="rpmJ"
                     /locus_tag="VK429_07005"
     CDS             2085..2198
                     /gene="rpmJ"
                     /locus_tag="VK429_07005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015851088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HLN91593.1"
                     /translation="MKVRPSVRKFCVKCKVIRRKGVVRVICENPKHKQRQG"
     gene            2246..2629
                     /gene="rpsM"
                     /locus_tag="VK429_07010"
     CDS             2246..2629
                     /gene="rpsM"
                     /locus_tag="VK429_07010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012258255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HLN91594.1"
                     /translation="MARIAGVDIPKTKKIGTALTYIYGIGPTSAAKILEEARVSPDLR
                     TSTLGEDQVARIRDVIDASYRVEGDLRKEISMNIKRLMDLGAYRGLRHRKGLPARGQR
                     THTNARTRKGPRKGAVAKKKEATKK"
     gene            2685..3074
                     /gene="rpsK"
                     /locus_tag="VK429_07015"
     CDS             2685..3074
                     /gene="rpsK"
                     /locus_tag="VK429_07015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011365705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HLN91595.1"
                     /translation="MATPKKKGKRKVRRSVPVGVAHIQATFNNTIITITDPDGNTLAW
                     ASAGAKGFKGSRKSTPFAATVAAEEVAKKAMDSGVNTVTVHIKGPGSGREAALRSLQA
                     SGLKVNFIRDVTPIPHNGCRPPKRRRV"
     gene            3111..>3223
                     /locus_tag="VK429_07020"
     CDS             3111..>3223
                     /locus_tag="VK429_07020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010966386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HLN91596.1"
                     /translation="MARYREAVCRLCRREGVELYLKGDRCFTDKCAIKRRG"
BASE COUNT          700 a          894 c         1097 g          532 t
ORIGIN      
        1 ccgacgccct gacgccgggg cgtgtcggat atgaactgct cttcgtcgcc ttcatcatat
       61 tcttctgcta cttctacacg gcggtcacct tcaatccggt cgacgtcgcg gacaacatga
      121 agaagtacgg gggattcgtg ccggggatcc gtcccggaaa gaagactgcg gagtacatcg
      181 acaagatcct tacgcggatc acgctgggcg gggcgatcta cgtgtccgtc atctgcgtct
      241 tgcccagcat cctcatcgcc cgcttcaacg tccccttcta cttcggcggg acagggctcc
      301 tgatcgtggt gggggtcgcg atggacacgg tccagcagat cgagtcgcac ctgatcacgc
      361 ggcattacga agggttcctc aagaaaggcc agatgaaggg gaggagggga taatccgatg
      421 atgggaatca tccttctggg cccccccggc gcggggaagg gtacccaggc caagaagttg
      481 acccaggcgt tcgccatccc ccagatctcg acgggggaca tgctgcgggc ggcggtcaag
      541 aacgggacgg agcttggcaa gaaggccaag gcgttcatgg atgcgggcgg actggtcccc
      601 gacgaggtgg tcatcggcat cgtaaaggag cgcctcgcgg agcccgactg cgggaaggga
      661 ttcattctcg acggatttcc gcggacgatc ccgcaggccg aggcgctcga ccgggtgacg
      721 aaggagctgg ggaaggagat ccgttttgtc ctctccctcg aagtcgacca gaaggacctg
      781 atggagcgat tgtgcggacg ccggacctgc accggttgcg gggcgatgta tcacgtgaag
      841 ttcaatccgc ccaaggtcgc cgggaagtgc gacaagtgcg gaacggccct gatccagcgg
      901 gacgacgaca aggaagagac gatcacgaac cggttggcaa attacaacaa ggccaccgcc
      961 ccgctgcttg attattacag ggacacgggg aaaatacggt ccgttatggc ttccggcgag
     1021 atcgatgcca tctacgccgg gatcgtcaag attctccggt aggggatgat tctcgtaaag
     1081 tcgcctcggg agatcgaggt gatgcggcag gccggtgcca tcgtaggcag gttctttgag
     1141 gaagtgaggc cgttgattct ccccggggtc agcacgtggg accttgaatc cttcgccgac
     1201 catttcatcg cccgaaacgg cgtgcgaagc gccttcaagg gatacatggg gtacccggcg
     1261 cacctttgcg cttccatcaa cgaggaggtg gtgcacggga tcccgtcgag gaaccgggtc
     1321 gttcgcgaag gcgacctcct gagcatcgat ttcgggatcg tccgggaggg attctacggg
     1381 gatgcggcga agacctttcc cgtgggcgcg gtgaacggcg tttcctcacg gcttctcgcc
     1441 gccacggaac ggtcgctctc tgctgggatc gacgaggtgc ggccggggaa ccggctgggg
     1501 gatgtctcgg cggccgtgca ggagacggtg gaggcagagg gattctcggt ggtccgggac
     1561 ttcgtcgggc acgggatcgg caggtccctg cacgaggatc cccagatccc gaatttcggg
     1621 aagcggggga tcggaccgaa actgctgccg ggaatgatcc tggccatcga accgatggtg
     1681 aacgccggag gatggcccgt ggaggtgctg gcggacgggt ggacggtcgt gacgcgcgat
     1741 cggagtcgat cggcgcactt cgagcacacg gtggctgtca ccgaggacgg gcatagaata
     1801 ttaagtcttc cttgactact tttgttatat ttatccggaa gtaaagagga atatggcaaa
     1861 agaagaggcg atagaaatcg agggtacggt gatcgagccg ttgccgaatg ccatgttccg
     1921 ggtggagctc gacaacaaga tgagggtgct cgctcatatc tccggcaaga tgcggatgca
     1981 cttcataaag atcctgccgg gggatcgggt caccgttcag ctgacgccgt acgacctgac
     2041 acggggccgg atcacctacc gatcgaaatg aagaggggac gaagatgaaa gtcagaccgt
     2101 cggtgcgaaa gttttgcgtc aagtgcaagg tcatccgccg gaaaggcgtc gtccgggtga
     2161 tctgcgagaa cccgaaacac aagcagcgcc agggttagac gcacagggat agacgccgca
     2221 acagatcgtt ccaaggagga gtcggttggc acgcatagcg ggagtggata ttccgaagac
     2281 gaagaagatc gggacggctc ttacgtacat ctacgggatc ggcccgacct ccgcggcgaa
     2341 gatcctcgag gaggcccgcg tctcgccgga tttgaggacg agcacgctgg gagaggacca
     2401 ggttgcccgg atccgggacg tgatcgacgc cagttaccgc gtcgaggggg acctgcgcaa
     2461 ggaaatatcg atgaacatca agcggctgat ggacctcggg gcataccggg gccttcgtca
     2521 ccgcaaaggg ctgccggcac ggggtcagcg tacccacacg aacgcccgga cccggaaggg
     2581 ccctcgcaag ggagccgtcg caaagaagaa ggaagccacg aagaaatagg gacggctgaa
     2641 ccagccggcg ataacccccg ccgcggggcg ggtgcggagg aacgatggca acgccgaaaa
     2701 agaaaggcaa gaggaaggtc cgccggagcg tgccggtggg ggtggcccac atccaggcga
     2761 ccttcaacaa cacgatcatc acgatcaccg atccggacgg caacacgctc gcgtgggcca
     2821 gcgcaggagc gaaagggttc aagggatcgc ggaaaagcac tccgtttgcg gccaccgtgg
     2881 ccgccgagga agtcgcaaaa aaggcgatgg acagcggcgt gaacaccgtg accgttcaca
     2941 tcaaggggcc cggatccggc cgcgaggccg cccttcggtc cctgcaggcc tccgggctga
     3001 aggtgaactt catccgggac gtgacgccga tcccgcacaa cggatgccgg ccgccgaagc
     3061 gccgtcgcgt ctgaccaccg caacccaaag ggacaaggag gacattttct ttggcaaggt
     3121 atcgtgaggc cgtctgcagg ctctgtcgtc gggaaggggt cgaactctac ctcaagggag
     3181 atcgctgctt caccgacaag tgcgccatca agaggagagg cta
//
LOCUS       DATGYW010000504         3548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_512219, whole genome shotgun sequence.
ACCESSION   DATGYW010000504 DATGYW010000000
VERSION     DATGYW010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3548
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512219"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1467
                     /locus_tag="VK429_07025"
     CDS             <1..1467
                     /locus_tag="VK429_07025"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HLN91597.1"
                     /translation="QDQEKLLTQITETFVNALGAESCVIWLVSPSDPDEMLIASVRGV
                     IGIEREGSRFFLSRSDTAEEVWKGAPFVVAKGGATSGEKNARHGAILFVPLLHQENLV
                     GLVKLGERNDRKPFGERELHMARIIADCAAGALNTVSRLGRTEKVSLRDPETGAYSAA
                     FLADYFEKERYKAGRFRRPLSVVFLVVENYSFLMEQTRESIVVGALTSMVEAIRRAVR
                     DSDLVAREEGNRFCIVLPETDAFGALLAVRRFRKAVKETCRIQFLGTEFFLQPFFMSA
                     TSPRDGRDFPELVRVAEEKFARQQKSPLHRMRLADRPFWDAFDILVGKREHYEFLRKG
                     EDVPYFLRFRKDLGRNAHFSIPRETWLRILEAIAQDVAVNPEDRGLVIAAGPTPEIYK
                     QIFLSFKGSSQAHRNVYVVGQSGSTRFDSKNLMYVATEDELLKDREFVLYLKDGGAYG
                     FFCAARGSEVEGFNTADESLVEALMEKAQEMYQLQGYF"
     gene            1468..3024
                     /locus_tag="VK429_07030"
     CDS             1468..3024
                     /locus_tag="VK429_07030"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4388 domain-containing protein"
                     /protein_id="HLN91598.1"
                     /translation="MTTSPGTKRVLIADPSDMSRQALSTYLREKGLEIIEVADGSKAL
                     AETLLRKPDILLLDLSVPILAPERLIQILRSNPNTRSMPVFFLSDREQSVSGFRQGVD
                     EFIRKPFQEEEILLRIQRSLYQDPLSEVLTGDSEISGNLSQIFLPDLWQMLAMNRKNG
                     ILQVEAEHISGSVYIERGEIISAVTRNIVGEKALFRLIPLKEGKFRFLPGKVGVRRTI
                     FTPSQQAILEGMRHNDELERLRDTLPRPNDAIAAVPEVHEIAAAGGVIREILLLAEFC
                     ATVEEIVDNCGFPDLVVYEALIALQTRGVLRFGEFEARPRKSDFLPPEDLARLRARLE
                     DHGSGAGEASGQIVFFLPDPSLLEGLLMAFGKFRDFEVDNVFFSLRRKEGIPSGSFGR
                     LRVGEKCAIHLYAFPYLRVLSPLWYTLATFPLGIVVFLKDEMSGSLESLMAVSDYTRG
                     VSARVVLAVMGNSFADFGIGENTLRLFRNRVERLGCALKVRAMEQVTAEEIRDSLAAV
                     IRKFLEVETA"
     gene            3098..>3548
                     /locus_tag="VK429_07035"
     CDS             3098..>3548
                     /locus_tag="VK429_07035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91599.1"
                     /translation="MAEKTGFSRRDLKGPDEFISTFGRTVAWCKENRAKVAAGAIGVA
                     AVLALALGIRAYLQWEENKSARDLWPTLNRAQELLQAPSAAEPSQLAAVEQFLQGHVS
                     RHPNTRATVYSLYYLGSIAFSRGNHDLAITQFRAGLATGKAAGIMKYL"
BASE COUNT          658 a         1092 c         1140 g          658 t
ORIGIN      
        1 caggaccagg agaaactgct gacccagatc acggaaacat tcgtcaacgc cctcggggcg
       61 gagagctgcg tcatctggct ggtttccccg tccgacccgg acgagatgct gatcgcttcc
      121 gtgcgcgggg tcatcgggat cgaacgggag gggtcccgtt ttttcctttc gcgctcggac
      181 acggcggagg aggtctggaa gggagccccg tttgtcgtcg cgaagggggg agccacaagc
      241 ggggagaaga acgcccgcca cggggcgatc ctcttcgtcc cgcttcttca ccaggaaaat
      301 ctcgtcggcc tcgtgaagct tggcgagcgg aacgacagga aaccgttcgg tgaacgggag
      361 ctccacatgg cccggatcat cgccgactgc gctgccggcg ccttgaacac ggtcagccgc
      421 ctcggacgga ccgagaaggt ttccctgcgc gacccggaaa cgggcgccta ctccgcggcg
      481 ttcctcgcag actacttcga gaaggagcga tacaaggcgg gccgtttccg ccgtcccctc
      541 tccgtcgtgt tcctggtcgt cgagaactac tccttcctga tggagcagac ccgggaaagc
      601 atcgtcgtcg gggcgctgac gtcgatggtc gaagcgattc gccgggcggt gcgggattcg
      661 gatctcgtcg cgcgggagga ggggaaccgg ttctgcatcg tccttccgga gaccgacgcc
      721 ttcggggcct tgcttgccgt tcgacgcttc cggaaggcgg tgaaggaaac gtgccggatc
      781 cagttcctcg ggacggagtt tttcctccag ccgttcttta tgtccgccac ttcgcctagg
      841 gacggccggg acttccccga gctggtgcgc gtcgcagagg agaaattcgc acgacagcag
      901 aagagcccgc tgcatcgcat gcggctcgcc gatcgaccct tctgggacgc cttcgatatc
      961 ctcgtcggga agcgggagca ctacgagttc cttcggaaag gggaggacgt cccgtacttc
     1021 ctacgcttca ggaaagacct cggacggaac gcccacttct ccattcctcg tgaaacctgg
     1081 cttcggatcc tcgaggcgat cgcacaggac gtcgccgtga accctgagga tcgcggtctc
     1141 gtcatcgccg ctggaccgac cccggagatc tacaagcaga tcttcctttc cttcaagggt
     1201 tcgagccagg cccacaggaa cgtctatgtc gtcggccagt cgggcagcac gcgttttgac
     1261 tcgaaaaatc tgatgtatgt cgccacggag gacgaactgc tgaaagaccg tgagttcgtt
     1321 ctctatctga aggatggagg cgcgtacggc tttttctgcg ccgcccgggg gagcgaggtc
     1381 gaagggttca acacggccga cgagtccctg gtggaagccc tgatggagaa ggcccaggag
     1441 atgtatcagt tgcagggata tttctaggtg acgacgtccc cggggacaaa gcgcgtcctg
     1501 atcgccgacc cctccgacat gtcgcggcag gcgttgtcga cgtacctacg cgagaagggg
     1561 ctggagatca tcgaggtcgc ggacgggagc aaggcgctcg cggagaccct cctgagaaag
     1621 ccggatatac tgctgctcga tctttcggtc ccgatcctgg cgcccgaacg actgatccag
     1681 atcctgcgga gcaacccgaa cacccggtcg atgccggtct ttttcctgag cgaccgggag
     1741 cagagcgtgt cgggatttcg ccagggcgtg gacgagttca tccgcaagcc gttccaggag
     1801 gaagagatcc tcctgcggat ccagcggtcg ctctaccagg atccgctctc cgaagttctg
     1861 accggtgatt ccgagatcag cggcaatctg agccagatct tcctgcccga cctgtggcag
     1921 atgctcgcga tgaaccggaa aaacgggatc ctgcaggtgg aagcggagca catctccggg
     1981 tcggtgtaca tagagcgggg cgagatcatc tccgccgtta ccaggaacat cgtcggggaa
     2041 aaggcccttt tccgcctcat acccctcaag gaaggaaagt tccgcttcct cccggggaag
     2101 gtcggcgttc gacggaccat tttcacgccg agtcagcagg caatcctcga agggatgcga
     2161 cacaacgacg agctcgagcg gctcagggac acgcttccgc gcccgaacga cgccatcgcc
     2221 gccgtcccgg aggtccatga gatcgccgcc gccggtggag tgatccgaga gatccttctg
     2281 ctggctgaat tctgcgccac cgtcgaggag atcgtcgaca attgcggatt cccggacctc
     2341 gttgtctacg aagccctgat cgcgctccag acccggggag tcctgcggtt cggggagttc
     2401 gaagcgcgcc cccgcaagag cgactttctg cctccagagg acctggcccg tctccgtgcg
     2461 cggctcgaag accacggatc gggagcgggg gaggcgtcgg gccagatcgt ctttttcctt
     2521 cccgatccgt cgctcctcga gggattgctg atggccttcg ggaaattccg tgacttcgag
     2581 gtggacaacg tcttcttctc gctccgccgg aaggagggga tcccctccgg gtcgttcggg
     2641 cgcctccgcg tgggggaaaa atgcgcgatc cacctttacg cctttccgta cctgcgcgtc
     2701 ctttccccgc tctggtacac tctcgcgacc tttccgttgg ggattgtggt tttcctgaag
     2761 gacgagatgt cgggatcgct cgagagcctg atggcggtat ccgactacac ccgcggggtc
     2821 tccgcgcgcg tggtgctggc cgtcatgggg aattccttcg cggatttcgg aatcggtgag
     2881 aacaccctcc gcctcttccg gaaccgggtg gagcggctcg gttgcgcgct gaaagtccgc
     2941 gcaatggaac aggtcaccgc ggaggagatc cgcgactccc tcgccgcggt catacggaag
     3001 tttctggagg tggagaccgc ctgaacgcga ggctcatcgc ctggcccatc tggtatacaa
     3061 tgcgaaatca acgaacgacc aaggagagac cgcagagatg gcagagaaga ccggcttcag
     3121 ccgcagggac ctgaaggggc ccgacgaatt catttccacg ttcggacgaa ccgtcgcctg
     3181 gtgcaaggag aaccgggcga aagtcgccgc aggggcgatc ggcgtcgccg ccgtcctcgc
     3241 gctcgcgctc gggatccggg cgtacctgca atgggaggag aacaagtccg cgcgcgacct
     3301 gtggccgacc ctgaaccggg cgcaggagct gctgcaggcc ccttctgcgg cggaaccttc
     3361 gcaactggcg gccgtcgagc agttcctcca ggggcatgtg agcaggcatc cgaacacgcg
     3421 tgcgaccgtg tactccctgt attatctcgg aagcatcgct ttttcccgcg ggaatcacga
     3481 tctcgcgata acgcaattcc gggcgggtct cgcaacaggg aaagccgcgg ggatcatgaa
     3541 gtatctcc
//
LOCUS       DATGYW010000505         1744 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_512229, whole genome shotgun sequence.
ACCESSION   DATGYW010000505 DATGYW010000000
VERSION     DATGYW010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512229"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..>1744
                     /locus_tag="VK429_07040"
     CDS             136..>1744
                     /locus_tag="VK429_07040"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HLN91600.1"
                     /translation="MTSRARLILGVLLSLYVLVVLRAFQIQVLGVREIRDRGAKQYCS
                     TIPLLPQRGVILDRTGTELAVSIATKSIFVQPAKLRDPGKAADLLAPRVSRPARELRK
                     LFAREKGFVWVRRQMPSTAADEAVREVKEALSALDPEALGKPSAIDGIGTVEEPKRFY
                     PNRELAASLVGFTNLDSEGMEGVELSLNRYLRGERGSLLCERDARGRLIVPATTPVEV
                     NSKGHSVALTIDRNIQHVAESELQAAVEKYNARGGMAVVLSPGTGEILAMATAPSFNP
                     NTPARGPAEARKNRSLTDSFEPGSTFKVFTLASALEMGAVRTTDRFFCENGSYHYAGK
                     VIHDTHRYGWLTAPEVVKFSSNIGITKINDRMDGERFYDMIRAFGFGSRTGIELQGEV
                     SGIAPSRRGFESRIRRATVSFGQGISVTPLQLAAGMAAVVNGGKVMKPYLVREVRDPE
                     GKTVFRGEPRELRRVLSPKTSAQMREILGKVVEEDGTGTQARIKGFLVGGKTGTAQKV
                     EPGSGRYSATKRTASFIGFLPLNDPKLL"
BASE COUNT          310 a          572 c          593 g          269 t
ORIGIN      
        1 agcgcaccct tcagaaggag caggaggttc tccgcctgga ggtgctggcg ctgaagagcc
       61 ccgcccgcat ccacgccatc gcccggaacg acctgcacat ggtgccggct cagatggacc
      121 gggtgatccg gtgagatgac ctcccgcgcg cgcctcatcc tcggcgtact cctctccctc
      181 tacgtcctcg tcgtattgcg ggcgttccag atccaggttc tcggggtcag ggagatccgt
      241 gaccgcggcg cgaagcagta ctgctccacc atccccctcc tcccccagcg gggagtgatc
      301 ctggatcgga cggggaccga gctcgcggtg agcatcgcca cgaaatcgat cttcgtccag
      361 ccggcgaagc tgcgcgatcc cggcaaggcg gccgacctcc tcgccccccg ggtatcccgg
      421 cccgcccggg agcttcggaa actgttcgcc cgggagaagg ggttcgtgtg ggtgcggcgt
      481 cagatgccat ccaccgccgc ggacgaagcg gtgagggagg tgaaggaggc gctctccgct
      541 ctcgatcccg aggcccttgg gaaaccgtcg gcaatcgacg gcatcgggac cgtcgaggag
      601 ccgaaacggt tctacccgaa ccgggaactg gccgcgtccc tcgtcggctt caccaacctt
      661 gacagcgagg ggatggaggg agtcgagctc tccctgaaca ggtatctgcg cggcgaacgg
      721 gggtccctcc tctgcgagcg ggatgcccgg ggacgcctga tcgtacccgc tacgacgccc
      781 gtggaggtca attcaaaggg acactccgtc gccctaacga tcgacaggaa catccagcac
      841 gttgcggaga gcgagcttca ggctgccgtg gagaagtaca acgcccgcgg cggcatggcc
      901 gtggtgctct cgcccggaac gggagagatc ctcgcaatgg cgacggcgcc atcgttcaac
      961 ccgaacacgc ccgcccgcgg ccccgccgag gcgaggaaga accgttccct caccgacagc
     1021 ttcgagcccg gatcgacctt caaggtgttc accctggctt cggccctcga gatgggagcg
     1081 gtgaggacca cggaccggtt cttctgcgag aacggatcct accactacgc agggaaggtg
     1141 atccacgaca cgcatcggta cgggtggctt accgcgccgg aggtggtcaa gttttcgagc
     1201 aacatcggca tcacgaagat caacgatcgc atggacgggg agcggttcta cgacatgatc
     1261 cgggccttcg gcttcgggtc ccgcaccggg atcgagctcc agggggaggt ttcgggaatc
     1321 gctccgtccc ggcgcggctt cgaaagccgc atccgccgcg ccaccgtctc cttcggccag
     1381 gggatctcgg tcacgccgct gcagctggcc gccgggatgg cggccgtggt caacggcgga
     1441 aaggtgatga aaccgtacct ggtccgggag gtccgcgacc cggaagggaa gaccgtgttc
     1501 cgcggtgagc cgcgggagct tcgacgggtt ctctccccga agacctcggc gcagatgcgg
     1561 gagatcctgg ggaaggtggt cgaggaggac gggacgggaa cgcaggcgcg catcaagggg
     1621 ttcctcgtcg gcgggaagac ggggacggcg cagaaggtcg agcccggatc gggccggtac
     1681 tccgcgacga aacggaccgc ttccttcatc ggcttcctcc cgctgaacga tccgaagctg
     1741 ctca
//
LOCUS       DATGYW010000506         1652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_512270, whole genome shotgun sequence.
ACCESSION   DATGYW010000506 DATGYW010000000
VERSION     DATGYW010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_512270"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1652
                     /gene="dnaX"
                     /locus_tag="VK429_07045"
     CDS             <1..>1652
                     /gene="dnaX"
                     /locus_tag="VK429_07045"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR02397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HLN91601.1"
                     /translation="WRPKTFDEIVGQGHVTRALANAITSGKIHHAYLFSGTRGVGKTT
                     FARILARALNCEKGPTPAPCLTCPSCLEVASGTDVQEIDGASNTGIDDIRSLRENAAY
                     APSRLRYKVYIIDEVHMLSKQAFNGLLKTLEEPPPHVVFILATTEPNRIPDTILSRVQ
                     RFDFRMLTDAEVRGRLSEMARAEGISAEEDALALMARYAFGSMRDGQSLFEQAAVSGG
                     GSITAALVEGMLGLVGVEAAIDLVSAAVLDGAGPALTRFAALLSRGADLKYLFLSLID
                     VLRDTAVLSFTGQEALLFRHSPASLDRVRELTARRSREEWMLLLDIAFRSERDVLATE
                     FPHLGFELLLLRLANAQGLLSVEALGASADAAGSPKAEATAAAQKGSVAPAATFSRRP
                     APVVDAPVSVAPAGGKMAEPGVANVASSKGDAGLWDAVRRNLEGRKKTFLLGLLSQMH
                     GELREGEFVIACDHEMMLDRLKEKDKWQPLLAALEESAGRPVPVRLSVSTEKKSPEPD
                     AVAPGDAGLERKALEEPTVLEILRTFEGSMLVKVQPAPPAEV"
BASE COUNT          251 a          606 c          540 g          255 t
ORIGIN      
        1 agtggcgccc gaagacgttc gacgagatcg tcgggcaggg acatgtcacc cgcgccctcg
       61 ccaacgccat cacctcgggg aagatccacc acgcctacct gttttccggc acccgtggcg
      121 tcggcaagac caccttcgcc cggatcctcg cccgtgcgct caactgcgaa aaagggccca
      181 cccccgcgcc gtgcctgacc tgcccctcat gcctggaggt cgcctcgggg accgacgtcc
      241 aggagatcga cggggcttcc aacaccggca tcgacgacat ccgcagcctg cgagagaacg
      301 ccgcctacgc cccctcccgc ctccggtaca aggtctacat catcgacgag gtccacatgc
      361 tgtcgaagca ggccttcaac gggctgctga agacgctcga ggagccgccc ccccacgtgg
      421 tgttcatcct cgccaccacc gagcccaatc ggatccccga cacgatcctc tcccgcgtgc
      481 agcggttcga tttccgcatg ctgaccgacg ccgaagtgcg ggggcggctg tcggagatgg
      541 cgcgcgcgga agggatctcc gccgaggagg acgccctcgc cctcatggcg cggtacgcct
      601 tcgggtcgat gcgcgacggc caatccctct tcgagcaggc ggcggtttcc ggcggcggca
      661 gcatcaccgc ggcgctggtc gaggggatgc tcgggctggt cggggtcgag gcggcgatcg
      721 acctcgtctc cgcggccgta ctcgacggcg ccgggccggc cctgacccgc ttcgccgccc
      781 tgctttcgcg cggcgcggat ctcaagtacc tgttcctttc cctgatcgac gtccttcgcg
      841 acaccgcggt cctctccttc accggccagg aagcgctgct cttccggcac tcccccgcgt
      901 ccctcgaccg ggtgcgggag ttgacggccc gccgttcccg ggaggagtgg atgctcctcc
      961 tcgacatcgc gttccgttcc gagcgggacg tgctggcgac cgaattcccg cacctcgggt
     1021 tcgaactgct cctcctgcgc cttgccaatg cccaggggtt gctctccgtc gaggcgctcg
     1081 gcgcttccgc cgacgcggcg ggatccccga aggcggaagc gaccgcggcc gcgcaaaagg
     1141 ggtcggtggc ccccgcggcg acgttctccc gcaggccggc ccccgtcgtc gacgcccccg
     1201 tctccgtcgc gcccgcgggc ggtaaaatgg ccgagccggg agtcgcgaac gtcgcgtcgt
     1261 cgaaagggga cgccggtctc tgggacgccg tccggcgcaa tctcgagggg aggaagaaga
     1321 ccttcctgct cggcctcctc tcccagatgc acggggagct tcgggaggga gaattcgtta
     1381 tcgcctgcga ccacgagatg atgctcgacc ggttgaagga gaaggacaag tggcagccgc
     1441 ttctcgccgc cctcgaggag tcggcagggc gccccgtgcc ggtgcggctg tcggtttcca
     1501 cggaaaaaaa aagcccggag cctgacgccg tagccccggg ggacgccggc ctcgagcgga
     1561 aagcgctcga agagccgacc gtcctcgaga tcctgcgaac cttcgaggga tcgatgctcg
     1621 tcaaggtgca gcccgcgccc ccggccgagg tc
//
LOCUS       DATGYW010000507         1837 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_419667, whole genome shotgun sequence.
ACCESSION   DATGYW010000507 DATGYW010000000
VERSION     DATGYW010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1837
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419667"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            46..852
                     /locus_tag="VK429_07050"
     CDS             46..852
                     /locus_tag="VK429_07050"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HLN91602.1"
                     /translation="MGTDRGTIGRLVIPREGGGVVQLESVTRIDRVPSASRIDRLDRQ
                     REVRLRASVAPGFAMADRLEALRAAVTAMNLPAAYTTRLSGRGRELERTFGEFVWAFA
                     LSIVFMYMILASQFENLVHPCTILLSLPLCVPFALLSIWLTGNTLNLYSALGILVLFG
                     VVKKNAILQIDHMNSLRSGGMDREAAILQGNRDRLRPILMTTLTFVAGMLPLAVGSGP
                     GAEERRVIAVVVIGGQTLSLLLTLLATPVVYSLLDDLGLAFRRREKFAIR"
     gene            913..1317
                     /locus_tag="VK429_07055"
     CDS             913..1317
                     /locus_tag="VK429_07055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91603.1"
                     /translation="MEPSKIVARYRDGRTLKGTSQNFFPNKPVFHVNRLGGKGPGDVI
                     EVKVEDLKAIFFVRDFSGNPRHVERKQLGPGERAQGRLMEVTCKDGEVFVGTTTGYDP
                     LRPGFFLFPVDPSANNARVFLLTSAVRAARFL"
     gene            1380..>1837
                     /locus_tag="VK429_07060"
     CDS             1380..>1837
                     /locus_tag="VK429_07060"
                     /inference="COORDINATES: protein motif:HMM:NF019844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HLN91604.1"
                     /translation="MRRFTAVCVSCLALLAFSGAIEGARKAMSVQVKQGHVRATPSFL
                     GKVISTLAYGDRVETLEEKDGWIRIVPPGSKTPGWIHSSALTEKRVVLKTGKKEADVA
                     ASSGELALAGKGFNAEVEAAFKAKNRDIDFTWIDRMQDMNVPPGKILAFV"
BASE COUNT          320 a          570 c          610 g          337 t
ORIGIN      
        1 gatgaagtgc tggaagatga gcgtgaagtc agcgctccat agctggtggg gaccgatcgc
       61 gggacgatcg ggcggctcgt gatcccccgg gagggcgggg gggtggtgca gctcgaaagc
      121 gtgacgcgga tcgatcgggt gccgagcgcg tcgaggatcg accgtctcga ccggcagcgc
      181 gaggttcgcc tccgcgcctc ggtggcgccc gggttcgcga tggccgaccg gctggaggcg
      241 ctgcgtgccg cggttacggc gatgaacctg cccgccgcct acaccacgcg gctttccggg
      301 cgggggcggg agctcgagcg gacgttcggc gagttcgtct gggcttttgc cctgtcgatc
      361 gtcttcatgt acatgatcct cgcctcccag ttcgagaacc tggtccaccc ctgcaccatc
      421 ctgctctccc tcccgctctg cgtccccttc gctctgctgt cgatctggct cacgggcaac
      481 accttgaacc tctactcggc gctcgggatc ctcgtcctgt tcggtgtggt caagaaaaac
      541 gccatcctcc agatcgatca catgaacagc ctgcgctcgg gcgggatgga ccgggaggca
      601 gcgatcctcc aggggaaccg ggaccggctt cggccgatcc tcatgacgac gctcacgttc
      661 gtggccggca tgctcccgct ggccgtcggc tccggcccgg gcgccgagga gcggcgcgtg
      721 atcgccgtcg tcgtcatcgg cggccagacg ctctccctcc tgctcacgct tctcgcgacg
      781 cccgtcgtct attcgctgct ggacgacctg ggcctcgcgt tccggcgacg cgagaaattt
      841 gcaatccgtt gatgtttttg atggaatgaa ccgaaatcag gtcgtttcga atggaacggc
      901 cggaggtccc ccatggaacc gtcgaaaatc gttgcacggt atcgcgacgg gagaaccttg
      961 aagggcacct cgcagaactt tttccccaac aaaccggtct ttcacgtcaa ccgcctggga
     1021 gggaagggtc ccggagacgt catcgaggtg aaggtcgagg acctgaaggc gatcttcttc
     1081 gtccgggatt tctcggggaa cccgaggcat gtcgaaagaa agcaattggg ccccggagag
     1141 cgggcgcagg gccggctgat ggaggtcacc tgcaaggacg gcgaggtgtt cgtggggacg
     1201 acgaccggct acgacccgct ccgtcccggc tttttcctgt tccctgtcga cccgtctgcc
     1261 aacaacgcgc gggtcttcct tttgaccagc gccgtccggg ccgcccggtt cctctgaacg
     1321 atttccccgc atcggcggga acagcccctc ttcagggcgg aaagagaagg aatcatcgga
     1381 tgcggcgttt cacggcggtg tgtgtctcgt gcctcgctct tctggcgttt tcgggagcca
     1441 tcgaaggggc gaggaaggcg atgagcgtcc aggtgaagca gggacatgtg agggcgaccc
     1501 cctcttttct cgggaaagtg atttccaccc tcgcctacgg cgatcgcgtg gaaaccctcg
     1561 aggagaagga cggctggatc cggatcgtcc cgcccgggag caagaccccg ggatggatcc
     1621 actcttccgc gttgaccgag aagagggtcg tcctcaagac ggggaagaag gaggcggacg
     1681 tcgccgcctc gagcggagaa ctggcactcg ccggcaaggg attcaacgca gaggtggagg
     1741 cggcattcaa ggcgaaaaac agggacatcg atttcacctg gatcgacagg atgcaggaca
     1801 tgaacgtccc cccgggcaag atcctggcct tcgtcca
//
LOCUS       DATGYW010000508         1559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_38660, whole genome shotgun sequence.
ACCESSION   DATGYW010000508 DATGYW010000000
VERSION     DATGYW010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1559
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38660"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            154..>1559
                     /locus_tag="VK429_07065"
     CDS             154..>1559
                     /locus_tag="VK429_07065"
                     /inference="COORDINATES: protein motif:HMM:NF025890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HLN91605.1"
                     /translation="MAIPRRRTLRSFFTAIFALTILPLFAGAAFALDNGQCLDCHGDP
                     AITGWSPAEKASNVTPGGAKRLDSPFGKFPGMSLHVDSAAYKASVHADVSCTDCHADI
                     KDLPHPARLKRVDCSGCHSEVAAVYAKSRHVVAADRKPVVNGPTCADCHGAHAVPKRT
                     LSTSPIYYRNLAATCARCHANPEVTSKRNVGIPGASRMYDQGIHHIAIVEKGLNKSAT
                     CADCHGAHDMLERTDPASTINKRNLPATCGKCHYGVFTIYRESVHGTSLARGVPDAPN
                     CADCHGEHDIRQATDPNSQVSFGAVSGKTCATCHTAEKLAARYGLPVDKVRGYEQSYH
                     GLSARLGDKTVANCSSCHGVHEIFPSSDPRSTINPKNLPVTCGKCHPGATANFASGNI
                     HVGPGGTGGKIKLWVERFYIWLIVVVIGGMVAHNGIDYFRKMQALYRRRREWKHPGYE
                     RLNRSERVQHILTLTTFFT"
BASE COUNT          282 a          575 c          471 g          231 t
ORIGIN      
        1 gcgcagccgg gacccgacac gagccgcgcg ttcgcccgcc ggtatttttt ccttgattcc
       61 ggcaggatcg atgctgtatg tatacagtcg acataaagca cggcgactcc ccgcgattct
      121 gcgatccgcg acatcgaaca aggggtggat gcgatggcga taccacgcag gcgtacgctc
      181 cggtccttct tcacggcgat cttcgccttg acgatcctgc cgctatttgc cggcgccgcc
      241 ttcgcgctcg acaacgggca atgcctcgac tgccacggcg acccggcgat caccggctgg
      301 tccccggcgg aaaaggcctc caacgtgacg ccgggagggg cgaagcgcct cgatagcccc
      361 ttcgggaagt tccccggcat gtcgctccac gtcgactccg cggcgtacaa ggcctccgtg
      421 cacgcggacg tctcctgcac cgactgccac gcggatataa aggatctgcc gcaccccgcc
      481 aggctcaagc gcgtggactg ctccgggtgc cactccgagg tggccgccgt ctacgcgaag
      541 agccggcacg tggtcgctgc cgatcgcaag cccgtcgtca acggaccgac gtgcgcggat
      601 tgccacggcg cccacgccgt accgaaacgg accctctcca cctccccgat ctactaccgc
      661 aaccttgccg ccacctgcgc ccggtgccac gcgaacccgg aggtcacctc gaagcggaac
      721 gtcggcatcc cgggggcctc ccggatgtac gaccagggaa tccaccacat tgccatcgtg
      781 gagaaggggc tgaacaagtc cgccacgtgc gccgactgcc acggcgcgca cgacatgctg
      841 gagcgcacgg accccgcgtc caccatcaac aagcggaatc tccccgcgac gtgcgggaag
      901 tgccactacg gcgtcttcac catctaccgt gagagcgtgc acgggacgtc gctggcccgc
      961 ggggtccccg acgcgcccaa ctgcgccgac tgccacggcg agcacgacat ccggcaggcc
     1021 accgacccga actcccaggt ctccttcggc gccgtctccg ggaagacgtg cgccacctgc
     1081 cacaccgccg agaaactggc ggcgcggtac gggttgccgg tggacaaggt gcgcgggtac
     1141 gagcagagct accacggcct ctccgcccgc ctgggcgaca agaccgtggc gaactgctcc
     1201 tcctgccacg gcgtgcatga aatcttcccc tcctcggatc cccgctccac gatcaacccg
     1261 aaaaacctcc ccgtcacctg cggcaaatgc cacccgggcg ccacggcgaa cttcgccagc
     1321 gggaacatcc acgtgggtcc cggcggcacg ggcggaaaga tcaagctctg ggtggagcgg
     1381 ttctacatct ggctgatcgt cgtggtgatc ggcggaatgg tcgcccacaa cggcatcgac
     1441 tacttccgga agatgcaggc tctctaccgg cgccggcggg agtggaagca ccccggctac
     1501 gagcggctga accgctcgga gcgggtgcag cacatcctca ccctcacgac cttcttcac
//
LOCUS       DATGYW010000509         1528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_472452, whole genome shotgun sequence.
ACCESSION   DATGYW010000509 DATGYW010000000
VERSION     DATGYW010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_472452"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..702
                     /locus_tag="VK429_07070"
     CDS             <1..702
                     /locus_tag="VK429_07070"
                     /inference="COORDINATES: protein motif:HMM:NF012424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HLN91606.1"
                     /translation="IPAESTSEERVPFKGRRRMIARKMVAAKTRVPHALLVDEADVSG
                     LLAERAKMREIGEREGVRITILPFIMKAVAGALQKHPALNASLDEDREEIVLKKRVDV
                     GMAVDAEDGLVVPVVRNADAKSVIELAREIERLSSAAREGTLAPGDLAGGTFTISSVG
                     SIGGLFSYPIINVPEAAILAAHKIVTRPVVRDGEIVPREMMYLSLSFDHRIVDGGEAT
                     RFLNEVVRRIEASAP"
     gene            719..>1528
                     /locus_tag="VK429_07075"
     CDS             719..>1528
                     /locus_tag="VK429_07075"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLN91607.1"
                     /translation="MKQFDLVVIGAGPGGYVAAIRAAQLGMRVAVAERDKPGGVCVNW
                     GCIPSKALLTSAGLYEDMRNAEAYGIRCQGLSADYGAVIRRSRKVADRMSRGVTFLFR
                     KNGIELFPASATILSPTTVRVGEEELSSKNILVASGTAVRGLPGIEPDGRVILTSDDA
                     LAQETLPRSVTVLGGGAVGVEFAYVYRAFGADVSIVEMEDQLLPRTDREVAKELEKIL
                     GKQGIRVLISAPAKGFDKVTRTLTVSSGGKEEALTAEKLLVAVGRKVLSAEM"
BASE COUNT          251 a          484 c          561 g          232 t
ORIGIN      
        1 atccccgccg agtccacgtc ggaggagcgg gtccccttca aggggagacg ccggatgatc
       61 gcgcggaaga tggtggccgc gaaaacccgt gttccccacg ccctgctggt ggacgaggcc
      121 gacgtctcgg gtctcctggc cgagcgcgcg aagatgcggg agatcggcga gcgggagggg
      181 gtgcggatca ccatccttcc cttcatcatg aaggcggtcg ccggggcgct ccagaagcac
      241 cccgccctca atgcctctct cgacgaggac cgggaggaga tcgtcctcaa gaagagggtc
      301 gacgtcggca tggccgtgga cgcggaggac ggcctggtcg tcccggtcgt ccgcaacgcc
      361 gacgcgaaat cggtcatcga actggccagg gagatcgaac ggctgtcgtc ggcggcacgg
      421 gaggggaccc tcgcccccgg ggatctggcc ggcggaacct ttacgatctc cagcgtcggt
      481 tcgatcgggg ggctgttcag ctaccccatc atcaacgtcc cggaggcggc catcctggcg
      541 gcgcacaaga tcgtgacccg gcccgtggtc cgcgacgggg agatcgtccc ccgggaaatg
      601 atgtacttga gcctctcctt cgatcaccgt atcgtggacg gcggagaggc gacgcggttc
      661 ctgaacgagg tcgtccggcg catcgaggcg tcggcgccat gacggaaagg atctcccgat
      721 gaagcagttc gacctggtgg tgatcggcgc ggggcccgga ggctacgtgg cggcgatccg
      781 cgcggcccag ctggggatgc gcgtggcggt ggccgagcgc gacaagcctg gcggggtgtg
      841 cgtcaactgg gggtgcatcc cgtccaaggc gcttctcacc tccgcgggat tgtacgagga
      901 catgcgcaac gccgaggcgt acgggatccg gtgccagggg ctttccgcgg actacggcgc
      961 cgtcatccgc cgaagccgga aggtggcgga ccggatgtcc cgcggcgtga ccttcctgtt
     1021 caggaagaac gggatcgagc tgttccccgc gagcgcgacg atcctctcgc ccaccaccgt
     1081 ccgggtgggg gaggaggagc tctcgtcgaa gaacatcctg gtggcctccg gaacggcggt
     1141 gcgggggctg ccggggatcg agcccgacgg ccgggtgatc ctgaccagcg acgacgccct
     1201 cgcgcaggag acgcttccac gctccgtgac cgtcctcggg ggtggcgcgg tcggcgtgga
     1261 gttcgcctac gtctaccgcg cgttcggcgc cgacgtgtcg atcgtcgaga tggaggacca
     1321 gctcctcccg cgcaccgacc gcgaagtggc gaaggagctg gagaaaatcc tcggaaaaca
     1381 ggggatccgg gtgctgatct ccgccccggc gaagggtttc gacaaggtga cccggacgtt
     1441 gacggtttct tccggcggga aagaggaggc cctcaccgcc gagaaactcc tcgtcgccgt
     1501 ggggcgcaag gtgctctccg ccgagatg
//
LOCUS       DATGYW010000510         1809 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_419749, whole genome shotgun sequence.
ACCESSION   DATGYW010000510 DATGYW010000000
VERSION     DATGYW010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1809
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419749"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..951
                     /locus_tag="VK429_07080"
     CDS             <1..951
                     /locus_tag="VK429_07080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004512301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HLN91608.1"
                     /translation="MGHLGAHGVTWEAGDVHEKLLGRMPIRAWNGRTYIDLEDEKVVA
                     DVILAFAPETNGELAYRSYRNLEKRVGKPLSQIVSGDRNFRITWEEITRKPRRFISTA
                     VWSGLVNEGRPYAPYTLNVEYGVPWRTLSGRQSLYLDHPYYGEFHEGLPTFKGKIPPA
                     ILDETEGETGLVLNFLTPHGKWSIHSTYSDNLRMLTLSRGGQVAWLNPEDAAGAEIAD
                     NEEIEIFNANGVVVCRAVVSSRIPKGTVFMYHAPERTLNIKKSKKSGRRGGVHNSLSR
                     IRLKPTLMLGGYAQFSYYFNYWGPTGVNRDCSVVVRKLGG"
     gene            956..>1809
                     /locus_tag="VK429_07085"
     CDS             956..>1809
                     /locus_tag="VK429_07085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015720760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HLN91609.1"
                     /translation="MDVRAQLVMVFNLDKCIGCHACSISCKNIWTDRRGAEYMWWNNV
                     ETKPGVGYPKKWEDQGTFKGGWVVDRGKLRLRALGKGPTLLNMFFQPNMPKMEDYYEP
                     FDFDYGNLYGAGDGTDQPVAGAFSRISGQKIETIRGGPNWDDDLSGSKLYAANDVNLE
                     QREIIDDYGRMFMQYLPRTCNHCLNPACVASCPSRAMYKRGEDGVVLVDQNVCKGWRF
                     CTSACPYKKVYFNWDTGKAEKCIHCFPRTETGQCMACAHSCVGRIRYVGVLLYDAERV
                     EQALLKADV"
BASE COUNT          368 a          553 c          599 g          289 t
ORIGIN      
        1 atgggccacc tgggagccca cggcgtcacc tgggaggctg gcgacgtgca cgagaagctc
       61 ctcgggagga tgccgatccg tgcctggaac ggcaggacgt acatcgacct ggaagacgag
      121 aaggtggtcg ccgacgtgat cctggccttc gcgccggaga ccaacgggga gctggcctac
      181 cgctcctacc ggaacctgga aaagcgggtc gggaagcccc tgtcgcaaat cgtgtccggg
      241 gaccggaatt tccggatcac ctgggaggag atcacccgga aaccgcgccg tttcatcagc
      301 accgcggtct ggagcggttt ggtcaacgaa gggcgcccgt acgcccccta taccctcaac
      361 gtggagtacg gagtgccgtg gaggaccctt tccggccgcc agtccctcta cctggaccat
      421 ccctactacg gggagttcca cgagggtctc cctaccttca aggggaagat ccccccggcg
      481 atcctggacg agacggaagg ggagacggga ctcgtgctca acttcctgac cccccacggc
      541 aagtggagca tccactccac ctacagcgac aatctccgga tgctcacgct atcccgcggc
      601 gggcaggtgg cctggctgaa tcccgaggat gcggcggggg cggagatcgc ggacaacgag
      661 gagatcgaga tcttcaacgc caacggggtc gtcgtctgcc gggcggtcgt ctcatcgcgg
      721 atcccgaagg ggacggtgtt catgtaccac gcgccggagc ggaccctcaa catcaagaag
      781 tcgaaaaaga gcggacgacg ggggggcgtg cacaacagcc tctcccgcat ccgcctcaag
      841 ccgacgctga tgctcggcgg atacgcccag ttcagctact acttcaacta ctgggggccg
      901 accggggtga accgcgattg cagcgtcgtt gtcagaaagt tgggggggtg acgcgatgga
      961 cgtgcgagcc caactggtga tggtgttcaa cctcgacaag tgcatcgggt gccacgcctg
     1021 cagtatctcg tgcaagaaca tctggaccga ccggcgcggg gccgaataca tgtggtggaa
     1081 caacgtggag accaagccgg gggtcggcta tccgaagaag tgggaggacc aggggacgtt
     1141 caagggcggc tgggtcgtcg atcgcggcaa actccgactt cgggccctcg ggaaggggcc
     1201 caccctcctg aacatgttct tccagcccaa catgccgaag atggaggact actacgagcc
     1261 gttcgacttc gactacggta acctctacgg agccggggac gggaccgatc agccggtagc
     1321 cggggcgttc tcccggatct cgggacagaa gatcgaaacc atccgggggg ggcccaactg
     1381 ggacgacgac ctctcgggct cgaagctcta tgccgcaaac gacgtcaacc tggaacagcg
     1441 cgagatcatc gacgattacg gcaggatgtt catgcagtac ctcccccgta cctgcaacca
     1501 ttgcctgaat ccggcgtgcg tcgcctcatg cccttcccgg gccatgtaca agcggggaga
     1561 ggacggggtc gtcctggtgg atcagaacgt ctgcaagggg tggcgtttct gcaccagcgc
     1621 ctgcccgtac aagaaggtgt atttcaactg ggacaccggg aaggcggaaa aatgtatcca
     1681 ctgcttcccg cgcaccgaga cggggcagtg catggcctgc gcccacagct gcgtcgggcg
     1741 gatccggtac gtcggggtcc tgctctacga cgcggaacgg gtcgagcagg ccttgctcaa
     1801 ggcggacgt
//
LOCUS       DATGYW010000511         2517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_251278, whole genome shotgun sequence.
ACCESSION   DATGYW010000511 DATGYW010000000
VERSION     DATGYW010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251278"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1173)
                     /locus_tag="VK429_07090"
     CDS             complement(<1..1173)
                     /locus_tag="VK429_07090"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLN91610.1"
                     /translation="MTTDMDDRGYRGGDSPSTLAETKAALRESEERYRSLVETISDWV
                     WEVDRNAVYTFVSPRIRDLLGYEPGEILGKTPFDLMPPDEALRVKEIFLPLAARRESF
                     PAIENANLHKDGHLVILETSGTPFFDADGTFLGYRGVDREIGGRKRAEEELRKSEEHL
                     LQVRKLQEIGHLAGGLAHHLNNLMTVVTGYSELLLTQVPEADPRHGAIVKIRAAGERA
                     AELTRELLAFGRQQILRPQVVEVNRFLSERSTTLRDLAGRSVRFTFSAGEDAGSIRVD
                     PEPLHQALVRLVANSRDAMPGGGELTLSTAAAELKGAIEGIDVAPGRYVLLAVQDSGS
                     GIDGETRARIFEPFHSLKSGSEGMGLPSIYGFVKQSGGYIFVDSSPGRGTTFRIYFP"
     gene            complement(1257..2408)
                     /locus_tag="VK429_07095"
     CDS             complement(1257..2408)
                     /locus_tag="VK429_07095"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HLN91611.1"
                     /translation="MSLFLLSFFLIYGSLHAYVLLKARSALALGPGATLALLLLLAVL
                     LCAPIVTWRLGHQGHEDAARVVAHAGYLWMGFLFFLVCLNLCADLLRLALRAMGSGGI
                     AANASATLAGGSTFLCIVGLAVALSAYAIVEASRIEVVRMRIVTDRLPASVPSLRIAQ
                     ITDLHLGLVHRNGKAREVAAIVAREHPDIFVSTGDLVDGQLDGVAGLAEILRGIPAPR
                     GKFAVLGNHEYYAGIDRAIAFTRKAGFTLLRDESVTVDDAVRIAGVDDPAGARFGRAG
                     GSSEAALLGDRPDGRFTLLLKHRPQLDPATGGKFDLQLSGHTHHGQIFPFRLLTRLVF
                     PLLAGDHPVPGGGILHVSRGTGTWGPPMRFLAPPEVTIVDIERSIPPGS"
BASE COUNT          437 a          838 c          854 g          388 t
ORIGIN      
        1 ggggaagtag atccggaacg tcgtcccgcg cccggggctg ctgtccacga agatgtaccc
       61 gccgctctgc tttacgaagc cgtagatcga agggagcccc atcccctcgc tccccgattt
      121 cagcgagtgg aacggttcga agatccgggc gcgggtctcg ccgtcgatcc cggagccgct
      181 atcctgcacg gcgagaagga cgtaccggcc gggagccacg tcgatcccct cgatcgcccc
      241 cttcagttcg gccgcggccg tcgatagggt cagctcgcct ccaccgggca tcgcgtcgcg
      301 ggagttggcg acgaggcgga ccagcgcctg atgaagcggt tcggggtcca cccggatcga
      361 tcccgcgtcc tctccggcgg agaaggtgaa acgcacggag cggcccgcca ggtcccgaag
      421 cgtcgtcgaa cgctccgaca ggaaccggtt cacctccacc acttggggcc gaaggatctg
      481 ctgccggccg aaggcgagca gctcccgcgt cagttccgcg gcacgctccc ccgcggcgcg
      541 gatcttcacg atcgcaccgt gccgggggtc ggcctccggc acctgcgtca ggagcagttc
      601 actgtacccg gtcaccacgg tcatcaggtt gttcaggtgg tgcgccagcc cgccggccag
      661 gtgcccgatc tcctggagct tccgcacctg gagcagatgc tcttcgctct tccgcaactc
      721 ctcctccgcg cgtttgcgcc ccccgatctc ccggtcgacc ccccggtatc ccaggaacgt
      781 cccgtccgcg tcgaagaacg gcgtgccgct cgtctcgagg atgaccagat ggccgtcctt
      841 gtgcaggttg gcgttttcga tcgccggaaa ggactcgcgc ctggcggcga gcggaaggaa
      901 gatctccttt acgcggagag cctcgtcggg aggcatcagg tcgaacgggg tcttcccgag
      961 gatttccccg ggctcgtatc cgaggagatc ccggattctc gggctgacga aggtgtaaac
     1021 ggcgtttctg tccacctccc agacccagtc ggatatggtc tcgacgaggc tacggtacct
     1081 ctcctcgctc tcccgcagcg cggctttcgt ctccgcgagg gtactggggg agtcgccccc
     1141 gcggtaccca cgatcatcca tgtcggtggt catggacatc ccttctcttg tcaggaaact
     1201 ttcttcggat tgtactacct gcggaaccga atgcaacgga acggggggat aattcctcag
     1261 gatccagggg gaatggagcg ctctatgtcc acaatggtta cctccggggg ggcgaggaac
     1321 cgcatcgggg gcccccacgt accagtgcct cggctcacgt gcaggatccc gcccccgggg
     1381 acggggtggt ctcccgcgag gagcgggaag actagccggg tgaggagacg gaaagggaag
     1441 atctgcccgt ggtgggtatg gcccgagagt tgaaggtcga attttccccc agtggccggg
     1501 tccagttgag ggcggtgctt gaggaggagc gtgaaccgcc cgtccgggcg atccccgagg
     1561 agggcggcct cggaggaccc gccggcccgg ccgaaccgcg cgccggcggg atcgtcgact
     1621 cccgcgatgc gcaccgcgtc gtcgaccgtc acggattcgt cccggaggag cgtgaacccc
     1681 gccttccggg tgaaggcgat cgcgcggtcg atccccgcgt aatattcatg gttccccaaa
     1741 accgcgaatt tcccgcgcgg tgccgggatc ccccgcagga tctccgccag ccccgcgacg
     1801 ccgtccagct gcccgtccac gaggtcccct gtcgacacga agatgtccgg gtgttcccgg
     1861 gcgacgatcg ccgcgacctc ccgggccttc ccgttccggt ggacgagacc gaggtggaga
     1921 tcggtgatct gcgcgatccg cagggagggg acggacgccg gcagccggtc cgtgacgatg
     1981 cgcatccgga cgacctcgat gcgggacgcc tccacgatcg cgtacgccga cagcgcgacg
     2041 gcgagcccga cgatgcagag aaacgtggat cctcccgcga gcgtcgccga cgcgttcgcg
     2101 gcgatcccgc cggaccccat cgccctcagg gccaggcgaa ggaggtcggc gcagaggttc
     2161 aggcagacga ggaagaagag aaaccccatc cagagatagc cggcgtgcgc gacgacccgt
     2221 gccgcgtcct cgtggccctg gtgaccgagc cgccacgtga cgatcggcgc gcacaggagc
     2281 accgcgagga ggaggagaag cgcgagcgtc gcgcccgggc cgagcgccag cgccgacctc
     2341 gccttgagga gaacgtaggc gtgcagggaa ccgtagatca ggaagaacga aagcaggaac
     2401 aggctcatgg cgaatgtgcg ataatcaacg ggtacgagga ccggtcccga cggaggagaa
     2461 tgtgcccacc tacgagtata aatgccccga gtgcggggag ttcgagaagg agcagcg
//
LOCUS       DATGYW010000512         1750 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_140745, whole genome shotgun sequence.
ACCESSION   DATGYW010000512 DATGYW010000000
VERSION     DATGYW010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1750
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140745"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1542)
                     /locus_tag="VK429_07100"
     CDS             complement(<1..1542)
                     /locus_tag="VK429_07100"
                     /inference="COORDINATES: protein motif:HMM:NF014489.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin attachment protein"
                     /protein_id="HLN91612.1"
                     /translation="MPGSLRKKGYRKVLKTIRDGKTIWLVGTGPRDTGQSDFKNRFTL
                     HDLSRLLPIYDASGYFAIDSHGGARLHQNMMNNMIHPFEEARFFSSLLPNVLTQTLIR
                     ATNVWGYRMYSRNTVRLAVESFLPTIDVWRCFDFLNYVPNMAPVAEEVLRGGKIFSPA
                     ISFTESPETTDAYYLRVLKEIVSLCGGTKDIILVIKDMAGVGSPARIRRLVDAILQKY
                     PGLILLYHRHSTDGLVMPAMAAAAAAGAKLFDVTDDASSRFYGHPPVRPLVRYLRELG
                     HEVRFDMERADEASAVVRGFIRNYDRFESQFKGFSNDVTAHRMPGGAFPSSFEQAERG
                     GFLDLMPHILKGMSYGNRIIKYFDVTPGSQITWTTWAGILQRYHKEGGEHGVKRLFSV
                     LDRFFEAGERLEALAHADQNVLLRLYAGGTDDLKNLLLGKYGPLPFGWPKDWVYRSVF
                     GDGWAEKVDAERIPSSPLSKLPDEDLGKARAAMEAEMGRSVSEEEFVLYLMHPKAAVD
                     FLKFHA"
     gene            complement(1562..>1750)
                     /locus_tag="VK429_07105"
     CDS             complement(1562..>1750)
                     /locus_tag="VK429_07105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase subunit L"
                     /protein_id="HLN91613.1"
                     /translation="TTIPLLRRIMDNPDFVAGRIDTGFIEENIAGLTEYVEYEEEIFK
                     VARFVAEVSGLGRNVHSG"
BASE COUNT          293 a          584 c          569 g          304 t
ORIGIN      
        1 ggcgtggaac ttgaggaaat cgaccgccgc tttcgggtgc atcaggtaga ggacgaattc
       61 ctcctccgag acggagcggc ccatctcggc ctccatcgcc gcccgcgcct tgcccaggtc
      121 ctcgtccggc agcttcgaca gcggggagga aggaatccgt tccgcgtcga ccttctcggc
      181 ccacccatcc ccgaagacgc tccggtagac ccagtccttc ggccacccga acggaagggg
      241 cccgtacttc ccgagcagga ggtttttcag gtcgtcggtg ccccccgcgt agagccgaag
      301 cagcacgttc tggtcggcgt gggcgagcgc ctcgagccgt tcccccgcct cgaagaaccg
      361 gtcgaggacg ctgaacagcc gcttgacgcc gtgctcgcca ccttccttgt ggtaccgctg
      421 caggatcccc gcccacgtcg tccacgtgat ctgcgatccc ggggtcacgt cgaaatactt
      481 gatgatccgg ttcccgtacg acatcccctt caggatgtgc ggcatgagat cgaggaaccc
      541 ccccctctcg gcctgctcga aggaggaggg gaaggcgccg ccgggcatcc ggtgggcggt
      601 gacgtcgttg gagaatccct tgaactgcga ttcgaaccgg tcgtagttcc ggatgaagcc
      661 gcggaccacg gcggacgcct cgtcggcccg ttccatgtcg aaccgcacct cgtgccccag
      721 ctcccgcagg taccgcacca gcgggcgcac cggcggatgg ccgtagaagc gggaagaggc
      781 gtcgtcggtg acatcgaaga gcttcgcccc cgccgcggcc gccgcggcca tggccggcat
      841 caccaggccg tccgtggagt gacggtggta caggaggatc agccccgggt acttctgcag
      901 gattgcgtcc acgaggcgcc ggatccgggc cgggcttccc accccggcca tgtccttgat
      961 cacgaggatg atgtccttcg tgccgccgca cagggacacg atctccttga gcacccggag
     1021 gtagtaggca tccgtcgttt cgggggactc ggtgaaggag atggccggcg agaagatctt
     1081 ccccccgcgc aggacctcct cggccaccgg cgccatgttc gggacgtagt tcaggaagtc
     1141 gaagcaccgc cacacgtcga tcgtggggag gaacgactcg accgccagcc gcacggtgtt
     1201 cctggaatac atccggtacc cccagacgtt cgtggcccgg atgagcgtct gggtcaggac
     1261 gttcggcaag agcgaagaga agaagcgcgc ctcctcgaag gggtggatca tgttgttcat
     1321 catgttctgg tgcaggcggg cgccgccgtg ggagtcgatg gcgaagtatc ccgaggcgtc
     1381 gtagatcggg agcaggcggg acaggtcgtg gagggtgaac cggttcttga agtcgctctg
     1441 gccggtgtcg cgcggcccgg tcccgacaag ccagatcgtc ttgccgtccc ggatggtctt
     1501 gagaaccttg cggtacccct tcttcctcag gctgcccggc atccttagcg aaccctcccc
     1561 ctcagccgct gtggacgtta cggcccaggc cggagacctc ggcgacgaac cgcgccacct
     1621 tgaagatctc ctcctcgtac tcgacgtact cggtcagccc ggcgatgttc tcctcgatga
     1681 acccggtgtc gatcctgccg gccacgaaat ccgggttgtc catgatccgc cgcaggagcg
     1741 ggatcgtcgt
//
LOCUS       DATGYW010000513         2082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_140798, whole genome shotgun sequence.
ACCESSION   DATGYW010000513 DATGYW010000000
VERSION     DATGYW010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140798"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            102..656
                     /gene="hprK"
                     /locus_tag="VK429_07110"
     CDS             102..656
                     /gene="hprK"
                     /locus_tag="VK429_07110"
                     /inference="COORDINATES: protein motif:HMM:TIGR00679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HLN91614.1"
                     /translation="MPDPVTPEIATVHGVFLEVIGVGVLLSGRSGIGKSECALDLVLR
                     GHRFVADDVIHVDKLGPATLVARGDELTGHYMEIRGLGIINIRDLFGATATTRMKKME
                     LVIRIEEWDSSREYDRLGLEDETVEILGVRLPSLLIPISPGRNLATIVEVAVRNHLLK
                     QLGVHSAREFVERQARRAGGGDSA"
     gene            653..1561
                     /gene="rapZ"
                     /locus_tag="VK429_07115"
     CDS             653..1561
                     /gene="rapZ"
                     /locus_tag="VK429_07115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011984476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HLN91615.1"
                     /translation="MTAVDVRAHRADIIVVTGLSGAGKSTAIKVFEDLGYYCVDNLPP
                     LLLPKIVDVVSEARGEGARVALGVDIRGKEFLPDLSRVLNDLRGGRSAVHVLFLDATD
                     EVLVRRFSETRRKHPLAARGGALGAIRKERRILSPLRRMADAMIDTSESNVHQLREVL
                     VRRFRRQGADGLKVTVISFGYRYGIPVEADMVVDVRFLDNPNFVPALKRFTGLDRGVR
                     DYVLGARASKGFLRRLSDLLLFLLPLYRKEGKAYFTLGVGCTGGRHRSVAVAEALGDI
                     LGKGKEAAVVVHRDLSRSSLPAKGMR"
     gene            1558..1980
                     /locus_tag="VK429_07120"
     CDS             1558..1980
                     /locus_tag="VK429_07120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011939808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HLN91616.1"
                     /translation="MIGAVVVSHGALATELVRAAVIIVGKIEGVVAVDISPDMSVEAV
                     HDAVEGAVRTVEDGDGVLLLTDMFGGTPSNIGLSFLGTHRVEVVSGVNLPMMVKFPMV
                     REGMPLDELARQLQECGRRSIMIPGDMLKKKAEKKEEK"
BASE COUNT          337 a          656 c          733 g          356 t
ORIGIN      
        1 ccagcggttc cgggggcggc tcctggcggc cgagggggcc gaggggcttt cgcaggttct
       61 ccgggaagag gacgagcgcg cctgagcgga aaggaggggc cttgcctgat cctgtgacac
      121 ccgagattgc gacggtccac ggcgtcttcc tcgaggtcat cggcgtgggg gttctcctct
      181 ccggacgcag cgggatcggc aagagcgaat gcgccctcga tctcgtcctc cggggccacc
      241 ggttcgtggc cgacgacgtg atccacgtcg acaagctcgg tccggccacg ctcgtcgccc
      301 gcggtgacga actcacgggc cactacatgg agatccgggg gctcgggatc atcaacatcc
      361 gggacctgtt cggcgcgacc gcgacgacgc ggatgaagaa gatggaactc gtgatccgga
      421 tcgaggagtg ggattcttcc agggagtacg accggctggg tctcgaggac gagaccgtcg
      481 agatcctcgg cgtccggctc ccctcccttc tcatcccgat ctcccccggg cggaacctgg
      541 cgacgatcgt ggaggtggcg gtgcggaacc acctgctgaa gcaactcgga gtccactccg
      601 cccgggagtt cgtcgagcgc caggcgcgtc gcgcaggggg gggcgactcc gcgtgaccgc
      661 cgtcgacgtc cgggcgcatc gcgccgacat catcgtcgtg accggactgt cgggggccgg
      721 gaagagcacg gcgatcaagg tgttcgagga cctcggctac tattgcgtgg acaacctgcc
      781 gccgcttctc cttcccaaga tcgtcgacgt cgtctccgaa gcgcggggcg aaggggcccg
      841 ggtggccctc ggggtggaca tccgggggaa ggagtttctc ccggacctct cgagggtcct
      901 caacgatctg cggggggggc ggagcgcggt ccacgtcctc ttcctcgacg cgacggacga
      961 ggtgctcgtg cggaggttca gcgaaacgcg gcggaagcac cccctcgccg ccaggggcgg
     1021 cgccctgggc gcgatccgga aggagcggcg gatcctttca ccgctgcgga ggatggccga
     1081 tgccatgatc gacacatccg agtccaacgt ccaccagctt cgggaagtcc ttgttcgacg
     1141 gtttcgccgc cagggggccg acggcctgaa agtgaccgtc atctccttcg ggtaccggta
     1201 cgggatcccc gtcgaggccg acatggtggt cgacgtccgg ttcctcgaca atccgaactt
     1261 cgttccggcc ctcaagcggt tcaccggcct tgaccgggga gtccgcgact atgtcctggg
     1321 ggcccgcgca tcgaaggggt tcctgcgccg gctgtcggat ctgttgcttt tcctcctccc
     1381 cctctataga aaggaaggga aggcgtactt cacgctgggc gtcggctgca ccggcggcag
     1441 gcatcgatcc gtcgctgtcg cggaggcgct cggcgatatt ctcgggaagg gaaaggaagc
     1501 ggccgtcgtc gtccaccgcg acctgtcgcg ttcctccctg cccgccaagg ggatgagatg
     1561 atcggagccg ttgtagtctc ccacggcgct ctcgccacgg aactggttcg cgccgccgtg
     1621 atcatcgtcg ggaagatcga gggagtcgtc gccgttgaca tttccccaga catgagcgtc
     1681 gaggcggttc acgacgcggt ggagggggcc gtccgcacgg tcgaggacgg ggacggcgtg
     1741 ctgcttctca ccgacatgtt cggcgggacg ccctccaata tcggcctgtc gtttctcggg
     1801 acgcaccgcg tggaagtcgt gtcgggggtg aacttgccga tgatggtcaa attccccatg
     1861 gtccgggaag ggatgccgct cgacgaactc gcccgccagt tgcaggagtg cggccgtcgc
     1921 agcatcatga tcccgggaga catgctgaag aagaaggccg aaaagaagga ggagaaatag
     1981 cgggatgccc ctggtgctcg cccggatcga ctgccggttg atccacgggc aggtagtgga
     2041 gacgtgggtg ccccacacgt ccgccgattc actgatcgtc gc
//
LOCUS       DATGYW010000514         3338 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_85828, whole genome shotgun sequence.
ACCESSION   DATGYW010000514 DATGYW010000000
VERSION     DATGYW010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3338
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85828"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="VK429_07125"
     CDS             complement(<1..288)
                     /locus_tag="VK429_07125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91617.1"
                     /translation="MKDLIWAIPLFPLVGFIVNGIVYLVGHRTKAEPVRHDPHGEQPV
                     AESQKDLGHPHAHMHGETHPRSKSLHTVVGTGTVALSCLFAFGAIFDVGLSR"
     gene            complement(449..754)
                     /gene="nuoK"
                     /locus_tag="VK429_07130"
     CDS             complement(449..754)
                     /gene="nuoK"
                     /locus_tag="VK429_07130"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013067258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HLN91618.1"
                     /translation="MTITINHFLIVSFLLFTVGLFGVLVRRNFLTVLMSVELMMNAVN
                     LNLVAFSQRLSSLTGQVFSVFVITIAAGEAAIGLALTISLFRQRKTLNIEEASTMQG"
     gene            complement(921..1490)
                     /locus_tag="VK429_07135"
     CDS             complement(921..1490)
                     /locus_tag="VK429_07135"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012709.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HLN91619.1"
                     /translation="MTGGVVTGGVLLTGGAGWAFVVFAVLALAMAVAVVVAKNPVHSA
                     LFLLASFLLVACLFILEQAEFVGAVQILVYAGGIMVLFLFVIMLVNQRTVAGGKAFQN
                     QWDIALLFLLVFLVPFLYILGTEKFPDIQQNPDAFRMIGTKIVGNTEAVAWSLYRDYL
                     LPFEVASVFLLVAMIGAVVLGKRSAEKVD"
     gene            complement(1501..1983)
                     /locus_tag="VK429_07140"
     CDS             complement(1501..1983)
                     /locus_tag="VK429_07140"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HLN91620.1"
                     /translation="MALKKWLDRLTLLDLFEGLSVTGRHFWKKKLTIQYPEQKKIPSD
                     RFRGMFRLDEERCIKCTLCAIECPINIIYIDWHNEKNPEGKSVKVLDRFDVDVKRCMF
                     CQLCEEACPTTPKSIWLTTKTYEMAAYDRNDSLYLDIRKLTDWREAPNVKPFTVVEQG
                     "
     gene            complement(1997..3172)
                     /gene="nuoH"
                     /locus_tag="VK429_07145"
     CDS             complement(1997..3172)
                     /gene="nuoH"
                     /locus_tag="VK429_07145"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013009372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HLN91621.1"
                     /translation="MKVLTPTVLTYIKVVLLVAGVPAIVGFVIVLAERRFMGFMQIRL
                     GPNRVGPKGTLQGLADLVKLVCKEDLTPARAEGAVFFLAPVLAVIPALTALALIPFGP
                     SLQLSRNVATPLYVTDINIGLLFLLAITSIGVYGIILGGWASNNKYSLLGGLRSAAQL
                     VSYEVPMGLALVAVLLMTRSLSLVEIVERQERIHLWFVFPGLLAFFLYFVSGVAETNR
                     NPFDLPEAESELVSGFNTEYSGVKFAFFFLGEYSAMIIISCVAVTVFFGGWLAPFPNV
                     KALEFLKVVPPIGWFTIKTGVFIFLYIWFRSTFPRYRFDQLMALGWKWMIPAGLVNIV
                     IVAVAILATPGRTNGLVTLSWILGLIFVAMFLLARLRQALTRRDRLAAEPAGARKAS"
     gene            complement(3169..>3338)
                     /locus_tag="VK429_07150"
     CDS             complement(3169..>3338)
                     /locus_tag="VK429_07150"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941015.1"
                     /note="Catalyzes the transfer of electrons from NADH to
                     quinone; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HLN91622.1"
                     /translation="FYCVSNGTNRPFRMHCRPPSFINLQALPRLAKGHLLSDLVALIG
                     TVDIVLGEVDR"
BASE COUNT          664 a         1049 c         1098 g          527 t
ORIGIN      
        1 gcgcgaaagg cccacgtcga agatcgcccc gaacgcgaag aggcaggaga gcgccacggt
       61 cccggtgccg acgaccgtgt gcagggactt cgagcgcggg tgcgtctcgc cgtgcatgtg
      121 cgcgtgcggg tggcccaggt ccttctgcga ctccgcgacg ggctgctcgc cgtgcggatc
      181 gtgccggacg ggctccgcct tcgtccggtg cccgaccagg tagacgatcc cgttgacgat
      241 gaatcccacc agcgggaaga gcgggatcgc ccagatgagg tccttcatcg ggttttccgg
      301 tgccagggaa caggcgtcag gcgatatcca ggtgtcaggt gccaggtgcc aggtgccagg
      361 aggagcccgc cccggcccct gatccctggc acctgaagcc ggccacctgc attttccctg
      421 atacctctca ccctgacacc tctccccttc atccctgcat cgtgctcgcc tcttcgatgt
      481 tcagcgtctt gcgctgtcga aagagggaga tcgtcagcgc cagcccgatt gccgcctctc
      541 cggcggcgat cgtgatgacg aagaccgaga agacctggcc ggtcaggctc gagagccgct
      601 gcgagaacgc aacgaggttc aggttgacgg cgttcatcat cagctcgacc gacatcagca
      661 ccgtcaggaa attccgccgc accaggactc cgaagagccc gaccgtgaag agcaggaagc
      721 tgacgatcag gaagtgattg atcgtgatcg tcatggcgcg gggctcaggt accagggaac
      781 aggtatcagg ggaaatacag gtgtcaggcg ccaggtgcca ggcgtcaggg ggaaccccct
      841 cccgtccctg aaacctgaca cctgaaccct gaaacctgca tcctccctga cacctctcac
      901 ctgacacctg tcacctttca tcagtccacc ttctccgcgg agcgcttccc gagcacgacg
      961 gcgccgatca tggcgacgag gaggaagacc gaggcgactt cgaaggggag gaggtagtcc
     1021 cggtagagag accaggcgac ggcctccgtg ttgccgacga tcttcgtgcc gatcatccgg
     1081 aaggcgtccg ggttctgctg gatgtcggga aacttctcgg tgccgaggat gtagaggaac
     1141 ggcaccagga agacgagcag gaagaggagc gcgatgtccc actggttctg gaaggccttt
     1201 ccgcccgcga ccgttcgctg gttgacgagc atgatcacga agaggaagag gaccatgatg
     1261 ccgcccgcat agacgaggat ctgcaccgcg ccgacgaact ccgcctgctc caggatgaag
     1321 aggcacgcca cgagcaggaa ggacgccagc aggaagagcg cggagtggac cgggttcttc
     1381 gccacgacga ccgccaccgc catcgcgagc gccaggaccg caaagacgac gaaggcccag
     1441 ccggcgcctc cggtcaggag gactcctccg gtaacgactc ccccggtcac cctcgcggcc
     1501 tcatccctgt tcgacgaccg tgaagggctt cacgttcggc gcctcgcgcc agtcggtcag
     1561 ctttcggatg tccagataca gggagtcgtt gcggtcgtag gccgccatct cgtaggtctt
     1621 cgtcgtcagc cagattgact tgggggtcgt cgggcacgcc tcctcgcaga gctggcagaa
     1681 catgcagcgt ttcacgtcca cgtcgaagcg gtcgagcacc ttgacggact ttccctccgg
     1741 gttcttctcg ttgtgccagt cgatgtagat gatgttgatc gggcactcga tcgcgcagag
     1801 ggtgcacttg atgcaccgct cctcgtccag gcggaacatc ccgcggaaac ggtccgaggg
     1861 gatcttcttc tgctccgggt actggatggt cagcttcttc ttccagaagt gacgtccggt
     1921 gaccgagagg ccctcaaaga gatcgaggag cgtcagcctg tcgagccatt tcttcagtgc
     1981 cattaccgtc tctccctcag gacgccttcc gggcgccggc cggctccgcc gccaggcggt
     2041 cgcgccgcgt cagcgcctgg cgcagccggg cgaggaggaa catcgccacg aagatcagac
     2101 cgaggatcca ggagagcgtc acgagcccgt tcgtgcgccc gggcgtcgcg agaatggcca
     2161 cggccacgat cacgatgttc acgaggcccg ccgggatcat ccacttccag cccagggcca
     2221 tcaattgatc gaagcgatac cgcggaaacg tcgagcggaa ccagatgtag agaaagatga
     2281 agacccccgt cttgatcgtg aaccagccga tcggggggac caccttcagg aactcgaggg
     2341 ccttcacgtt cggaaagggg gcgagccacc ctccgaagaa gacggtgacc gccacgcagg
     2401 agatgatgat catcgccgag tattcgccga ggaagaagaa ggcgaacttc acgcccgagt
     2461 actccgtgtt gaacccggag acgagctccg attcggcttc cggcaggtcg aagggattcc
     2521 ggtttgtctc cgcgactccc gagacgaagt agaggaagaa ggccagcagg ccgggaaaga
     2581 cgaaccagag gtggatcctc tcctgccgct ccacgatctc gacgagcgag agcgaccgcg
     2641 tcatcagcag caccgcgacg agcgccagcc ccatcgggac ctcgtacgac acgagctgcg
     2701 cggccgagcg caggcccccg aggagcgagt acttgttgtt cgaggcccag ccccccagga
     2761 tgatcccgta cacgccgatc gaggtgatgg cgagcaggaa gaggagcccg atgttgatgt
     2821 ccgtcacgta gagcggcgtt gcgacgttgc gggagagctg cagggacggg ccaaagggga
     2881 tcagggccag ggccgtcaac gccgggatga cggcgaggac gggagcgagg aaaaagacgg
     2941 ccccttcggc ccgggccggg gtcaggtctt ccttgcagac gagcttgacg aggtccgcca
     3001 gcccctgcag cgttcccttg ggccccacgc ggttgggccc gaggcggatc tgcatgaatc
     3061 ccatgaaccg gcgctccgcg agaacgatca cgaatcccac gatcgccggc acgcccgcca
     3121 ccaggaggac gaccttgatg taggtcagca cggtcggagt caggaccttc atcggtcgac
     3181 ctctccgagc acgatgtcga cggtgccgat cagggccacg aggtccgaga ggagatggcc
     3241 cttcgccagc cggggcaggg cctggaggtt gatgaacgag ggggggcggc agtgcatccg
     3301 gaagggacgg ttggtgccgt tggagacgca gtagaagc
//
LOCUS       DATGYW010000515         2064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_39716, whole genome shotgun sequence.
ACCESSION   DATGYW010000515 DATGYW010000000
VERSION     DATGYW010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39716"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..613)
                     /locus_tag="VK429_07155"
     CDS             complement(<1..613)
                     /locus_tag="VK429_07155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012829464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HLN91623.1"
                     /translation="MATMLAGGRRIEVAWHGPGPDLAPTLVFLHDGIGCAATWRDFPA
                     ALARETGCGALVYSRAGYGGSDPVALPRPLTYMHDEGFFALPDLLDAAGIRQAVLVGH
                     SDGGSIALLHASTPRSLPRVRGLLLEAPHVFCEEISVRAIGKARDEYLRTDLRAKLER
                     YHGGNVDCAFWGWNRAWLDPGFLAWNIEDRLPAITVPVLVVQGT"
     gene            complement(743..1204)
                     /locus_tag="VK429_07160"
     CDS             complement(743..1204)
                     /locus_tag="VK429_07160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018151831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HLN91624.1"
                     /translation="MRHILFVAILLAAVSMPVWSRADIDGTIGVVHNAAGSATITRGG
                     NVLPATTGTRLHTGDTLGTGPDGSLGVILRDNSSLSLGPSSSLVLQDFLFSPSEGKFS
                     LFVRISKGTMAYLSGLIGKLAPEKARFETPTASIGIRGTHFAVKVGETVSQ"
     gene            1478..1792
                     /locus_tag="VK429_07165"
     CDS             1478..1792
                     /locus_tag="VK429_07165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91625.1"
                     /translation="MPDHPEKGSVLEVICPCCEARLTVDPASGAVLGSEKAAHARAGV
                     DLKDARQVLEQETARIHERYDQIVRTEKGRGAVLDKLFKSHIEKSKDEPAPRPIRDID
                     LD"
BASE COUNT          401 a          637 c          676 g          350 t
ORIGIN      
        1 cggttccctg taccacgagc acgggaaccg tgatggcggg caggcgatcc tcgatgttcc
       61 aggcgagaaa ccccggatcc agccaggccc ggttccatcc ccagaaggcg caatcgacgt
      121 tccctccatg gtaccgttcg agcttcgccc tcaggtcggt gcggaggtat tcgtcgcgtg
      181 ccttcccgat ggcgcgcacc gagatctcct cgcagaagac gtgcggcgct tccagcagaa
      241 ggccgcggac acgcggcagg gaccgcggcg tcgaagcgtg cagcagggcg atggaaccgc
      301 cgtcgctgtg cccgacgaga acggcctggc ggatacccgc cgcgtcgaga aggtccggaa
      361 gggcgaagaa cccctcgtcg tgcatgtagg tgagcggtcg cggaagcgcg acgggatcgg
      421 agccgccgta tccggcgcgg ctgtagacga gagcgccgca ccccgtctcg cgggcgagcg
      481 ccgcgggaaa gtcacgccac gtcgcggcgc acccgatgcc gtcgtgcagg aagacgaggg
      541 tgggcgcgag gtccggcccg gggccgtgcc aggcgacctc gatgcggcgg ccgcccgcga
      601 gcattgtcgc catcgatcct ccccccccct ttgttgtgtg gagggctgcc gtgtatatgt
      661 tttataacac gaccgacagg aagatcattt tcaatgcgtt gggccgaccg gaagggaagt
      721 tcgttcgggg agattccgac ctttattgcg atacggtttc tccgaccttc acggcgaagt
      781 gggtcccccg gatgccgatg gaggctgtcg gggtttcgaa acgggccttc tccggcgcca
      841 gcttgccgat gaggcccgag aggtaggcca tggtcccctt ggagatacga acgaacaggc
      901 tgaactttcc ctcggagggc gagaagagaa agtcctggag gacgagactg ctggacggac
      961 cgagcgagag ggaggagttg tcccggagga tgacgccaag cgatccgtcg gggcccgtgc
     1021 cgagggtgtc ccctgtgtga agcctggtcc ctgtcgttgc aggaagaacg ttccccccac
     1081 gggtgatggt cgccgaaccc gcggcgttgt gcaccacccc gatggtcccg tcgatgtcgg
     1141 cgcgactcca caccggcatc gatacggccg ccagaagaat cgcgacgaac aggatgtgcc
     1201 tcatggcctt cctcctaaga ggggtgtcat ccgtcgtttc tcgtctctcc acccctgacg
     1261 tatttctcat gaaattagcg tgccaaccgg agtgaatctt aaagagcgat aaataacaag
     1321 gagttatcaa atttcaccga acggcggggg agacaatttc cggcatggat atgggaatat
     1381 cgatggaatg tgtcaaaaaa tgtcacactg tggaatccgt ggggattcca ttctacaatg
     1441 tcgttaaaag aaccagatgc ggatccagga gggggcgatg ccggatcatc ccgaaaaggg
     1501 gagcgttctc gaagtgatct gcccgtgctg cgaagcgcgg ctcaccgtcg atccggcaag
     1561 cggcgccgtg ctcggaagcg aaaaggccgc ccatgcgcgc gccggggtcg atctgaagga
     1621 cgcgcggcag gtcctcgaac aggaaacggc gcgcatccac gaacggtacg accagattgt
     1681 gcggaccgaa aagggccgag gcgcggtgct ggacaagctg ttcaagagtc acatcgagaa
     1741 atcgaaggac gaaccggcgc cccgccccat ccgggacatc gacctcgact aagcgctcca
     1801 tttcacaaat acggcaacgt atccaaagag cgatcccgga aggcgctgcg cctccgggac
     1861 tcacccttcg gctgtgcccc ccgttcttcc tactgcgggg gtaccccggc agcgcgaagc
     1921 tcgtactggg gcgccgcctc ggagggggac tccgttcgtg gctcgccgtg cggtgaacct
     1981 gcacggctgc gctttacctc actgcgcccc cctcctgcgg cgactccgcc ggacggaccc
     2041 tcctgttgca tgcgccttcc gcat
//
LOCUS       DATGYW010000516         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_473355, whole genome shotgun sequence.
ACCESSION   DATGYW010000516 DATGYW010000000
VERSION     DATGYW010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_473355"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..922)
                     /gene="xerD"
                     /locus_tag="VK429_07170"
     CDS             complement(29..922)
                     /gene="xerD"
                     /locus_tag="VK429_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014851808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HLN91626.1"
                     /translation="MMDNDALLDAFLLHLKTERRLSGNTLASYGADLRGFSAFLADRG
                     IDARKFTRPDFLDHLTALREGGLSARSTARHVSTLRSFFRFLVREGVLAASPVSGVKA
                     PRLGRPLPKYLTLTQVDRLLAAPDGHTPEGIRDRAMLTIMYASGLRASELVTLRLENV
                     DANAGFLYVLGKGGKERVVPVADVALTVLAGYIASARQAFLGKRLSNDLFLSRRGKAI
                     TRQTLWNRIRRWALAAGIEQRISPHTLRHSFASHLLAGGADLRAVQAMLGHADIATTQ
                     IYTHVTPERLRDIHRKHHPRA"
     gene            complement(919..1419)
                     /locus_tag="VK429_07175"
     CDS             complement(919..1419)
                     /locus_tag="VK429_07175"
                     /inference="COORDINATES: protein motif:HMM:TIGR00040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HLN91627.1"
                     /translation="MKVGILSDSHDHRGAAEGALLLFRAEGVGMVLHLGDVCSPAVLA
                     AYGDPAIPLRGVFGNNDSDRDGLQDATRGAFRQGPYIETVDGRKILLAHSYDQLQGEL
                     SGQGRFDLVLFGHTHRPLTMRVGKALVVNPGESCGLMRGKNTCAIVDLATMEPRIVEI
                     PLPGTG"
     gene            complement(1436..>2079)
                     /locus_tag="VK429_07180"
     CDS             complement(1436..>2079)
                     /locus_tag="VK429_07180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HLN91628.1"
                     /translation="FVEHCRTLAAFDGQTPVIVATDSPESGTTEFLVVCPDERGLFAK
                     IAGTLSANSMNILTASIATTVDGVALDTFHANYLGKSLRGDPKKERVIADLSRVLRGE
                     TTVEALMAEPRAGKYVRVRVPRYRPTRVVFDNSVSSRCTVVDIFTYDRIGLLYDITST
                     LTALGIDIALSKISTKADQVADVFYIADRDGRKISATDRQEEIRQALLASIGA"
BASE COUNT          341 a          700 c          723 g          315 t
ORIGIN      
        1 aatgccaaga tattcacgag agggtgcact aggcccgggg gtggtgcttg cggtggatgt
       61 cccgcagccg ttccggggtg acgtgcgtat agatctgggt ggtcgcgatg tcggcgtggc
      121 cgagcatcgc ctggaccgcg cgcaggtccg cgccccccgc cagcaggtgg ctggcgaacg
      181 agtggcgcag cgtgtggggg gagatccgct gctcgatccc cgccgccagc gcccaccgcc
      241 ggatccggtt ccagagcgtc tggcgggtga tcgccttccc ccggcgcgag aggaacaggt
      301 cgttcgaaag ccgcttccca agaaacgcct gccgcgcgga ggcgatgtac ccggcgagaa
      361 cggtcagggc gacgtccgcc accggcacca cccgctcctt gccccccttt cccagcacgt
      421 acaggaaacc ggcgttcgcg tcgacattct cgagccgcag ggtcaccagc tcggaggcgc
      481 gcagcccgga ggcgtacatg atcgtcagca tcgcccggtc ccggatccct tccggtgtgt
      541 gcccatccgg cgcggccaac agacgatcca cctgcgtgag ggtgaggtat ttcggcaggg
      601 gtcgcccgag ccggggcgcc ttgaccccgg agacggggga ggcggcgagt accccctcgc
      661 gcacgaggaa ccggaagaag gagcgcagcg tcgagacgtg cctggcggtg gaacgggccg
      721 agagcccccc ctcccgcaag gccgtgaggt ggtcgaggaa gtcggggcgg gtgaacttcc
      781 tcgcgtcgat cccgcggtcc gcgaggaagg cggaaaaacc gcgcaggtcg gcgccgtacg
      841 acgccagcgt gttccccgag agacgccgct ccgtcttcag gtggagcaga aaggcgtcga
      901 ggagggcgtc gttgtccatc atccggtccc cgggaggggt atttccacga tccgcggctc
      961 catcgtggcc aggtcgacga tcgcgcacgt gttcttcccc cgcatgaggc cgcacgactc
     1021 ccccgggttc accaccagcg cctttcccac ccgcatcgtg agcggccggt gcgtgtggcc
     1081 gaaaagaacg aggtcgaacc gcccctgccc ggagagttcc ccctgcaact ggtcgtagga
     1141 atgggcgagg aggatcttcc gcccatccac cgtttcgatg tacggcccct gccggaaggc
     1201 cccgcgggtg gcatcctgca gcccgtcgcg gtcggaatcg ttgttgccga agaccccgcg
     1261 cagggggatc gccggatcgc cgtacgccgc gaggacggcc ggcgagcaga cgtccccgag
     1321 atggagcacc atccccaccc cctcggcgcg aaaaaggagg agcgcgcctt ccgcggcgcc
     1381 ccggtggtcg tgggagtctg aaaggatccc caccttcacg agggcgccac ctccactagg
     1441 cgccgatcga cgcaaggagc gcctgacgga tctcctcctg gcggtccgtg gccgagatct
     1501 tccgcccgtc ccggtccgcg atgtagaaga cgtcggccac ctggtccgct ttcgtggaga
     1561 tcttggagag agcgatgtcg atcccaagcg ccgtcaacgt gctcgtgatg tcgtagagga
     1621 gcccgatccg gtcgtaggtg aagatgtcca ccacggtgca gcgcgaggag accgagttgt
     1681 cgaagacgac gcgggtgggc cggtaccggg ggacccggac ccggacgtat ttccccgccc
     1741 gcggttccgc catgagtgcc tccacggtgg tctccccgcg aagaacgcgc gacaggtcgg
     1801 cgatgacgcg ctccttcttc gggtcccccc gcagggactt gccgagatag ttggcgtgga
     1861 acgtgtccag cgccacgccg tccacggtgg tcgcgatcga tgcggtgagg atgttcatgc
     1921 tgttggccga cagcgtcccc gcgatcttcg cgaagaggcc gcgctcgtcg ggacatacga
     1981 cgaggaactc cgtggtccca gactccggcg aatcggtcgc cacgatgacg ggggtctgcc
     2041 cgtcgaacgc cgcgagagtc cggcaatgct cgacgaacc
//
LOCUS       DATGYW010000517         2265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_39831, whole genome shotgun sequence.
ACCESSION   DATGYW010000517 DATGYW010000000
VERSION     DATGYW010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39831"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VK429_07185"
     CDS             complement(<1..254)
                     /locus_tag="VK429_07185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018140884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carotenoid 1,2-hydratase"
                     /protein_id="HLN91629.1"
                     /translation="MARRRVVILAALCVAALVASGLFLWRALAPRPAPSSPSASVTAL
                     LGGEDPGGFARATAPREFRFPADHGPHPEFRHEWWYFTGNL"
     gene            complement(255..>2265)
                     /locus_tag="VK429_07190"
     CDS             complement(255..>2265)
                     /locus_tag="VK429_07190"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HLN91630.1"
                     /translation="GDDVTRQALETTAVADIATAQEVLGKVGRLSRIDLLLPGGAEEE
                     DALSRIRVILPPEAEILPAGARGSALEQMTRAFSLNLSALSLLALVVGTFLVYNTMTF
                     SVLQRRQLVGTLRALGVTRGEVFAQVLSEAAVLGAAGTVLGLPLGYLLGTFLMEMVTR
                     SIGDLYFALSVREVSATAAMLVKTVGLGILGAVAASVGPAYEATSTPPRDVMRRSAIE
                     TGVRKILPAISAAGAGLILLGAGVQLYPSRSIPLSFGGLFSIVAGYALLTPGATTVLV
                     RGVQPGLAAAFGTQGKMAARSIPASISRTGVAAAALVVAVSTTVGIGIMIDSFRRTVS
                     DWLDQSLRSDIYVSSTEDRRGPERTPLPPDLIEGVSSAPGVYQVALVSRMTLESPSGF
                     TELFVMRIPREAFDAFRFREGDARTAWEAMRRGAVIVSDPYAYRHGLRKGDSVRLRTD
                     RGEREFPVAGVYYDYSSDQGLVGILGETFERFWEDRGVDSIGVRLLPGIPADAAIGRI
                     REIAGDRAILVRSNRSLREASLRVFDRTFAVTNVLRSLTILIAFVGVLNALMAIQMER
                     GREHAVLRVLGLTPRQTWGLVAGESAVIGLIAGVLAVPLGAAQALVLIRFINRRSFGW
                     TMQIYVDPWLLLQAVALALAASLLAGIYPATRLALSSPARALQEE"
BASE COUNT          382 a          785 c          817 g          281 t
ORIGIN      
        1 aggttcccgg tgaagtacca ccactcatgg cggaactccg ggtgcgggcc gtggtcggcc
       61 gggaaccgga attcgcgggg ggccgttgcg cgggcgaacc cgccagggtc ttcccctccg
      121 agcagcgcgg tcacggacgc ggacggggac gagggtgcgg ggcgaggagc cagggcgcgc
      181 cacaggaaca ggccggaggc gacgagagcg gccacgcaca gtgcggccag gattacgacc
      241 cggcggcgcg ccattcactc ctcctgcagc gctcgcgccg gggaggagag ggccagccgg
      301 gtcgccgggt agatcccggc gaggagggag gcggccaggg ccagcgcaac ggcctggagc
      361 aggagccaag ggtcgacgta gatctgcatc gtccacccga aggagcggcg gttgatgaac
      421 cgaatgagca ccagcgcctg cgccgccccg agcgggacgg cgaggacccc cgcgatcagt
      481 ccgatcacgg cggactcccc tgcgaccagt ccccacgtct gccggggggt gagcccgagg
      541 acccggagca ccgcgtgctc ccggccgcgc tccatctgga tcgccatcag cgcgttcagg
      601 actccgacga aggcgatgag gatcgtgagg gaacgcagga cgttcgtcac cgcgaaggtc
      661 cggtcgaaga ccctgaggga cgcctcccgc agcgaccggt tggagcgtac caggatcgcg
      721 cggtcgcccg cgatctcccg gatccgcccg atcgcggcgt cggccgggat tccgggcagg
      781 agtcgaacac cgatcgaatc cacgccccgg tcttcccaga accgttcaaa cgtctccccg
      841 aggatcccca ccagcccctg gtccgagctg tagtcgtaat agacgcccgc cacggggaac
      901 tcccgctctc cccggtcggt gcgcaggcgc accgagtccc ccttccgcaa tccgtgccgg
      961 tacgcgtacg ggtccgagac gatgacggcg ccgcggcgca tcgcctccca tgcggttcgg
     1021 gcgtctccct cgcggaagcg gaaggcgtcg aatgcctccc gggggatccg catcacgaac
     1081 agctcggtga accccgaggg ggactcgagg gtcattcggc tgacgagggc gacctggtag
     1141 accccggggg cggaggatac gccctcgatc aggtccggcg ggaggggtgt tcgttcgggg
     1201 cctcgccggt cctccgtgga ggagacgtag atgtccgacc ggagggactg gtcgagccag
     1261 tcggagaccg tccggcggaa gctgtcgatc atgatcccga tcccgaccgt ggtggacacg
     1321 gcgaccacaa gggcggccgc cgccaccccc gtgcggctga tcgatgccgg gatgctccgg
     1381 gcagccatct ttccctgcgt gccgaacgcg gcggccaggc ccggctggac cccccggacc
     1441 agtaccgtgg tcgcgcccgg cgtgaggagc gcgtaccccg cgacgatgga gaacagtccg
     1501 ccgaaggaca gggggatgct ccgggaggga tagagctgca ccccggcgcc cagcaggatc
     1561 aggccggccc ccgccgccga aatcgccggg aggatcttac ggacgcctgt ctcgatggcg
     1621 gaacgtcgca tcacgtcccg gggcggggtg gaggtcgcct cgtacgccgg tcccacggat
     1681 gccgcgaccg ccccgaggat ccccaacccg accgtcttga cgagcatcgc cgccgtcgcc
     1741 gaaacctccc ggacggagag ggcgaagtac aggtccccga tcgagcgggt gaccatctcc
     1801 atgaggaatg taccgaggag gtacccgagg ggaagcccga ggaccgtccc tgccgcgccg
     1861 aggaccgccg cttcggacag gacctgcgcg aacacctccc ccctcgtgac accgagggcc
     1921 cgcagcgtcc cgacgagctg ccggcgctgc aggaccgaaa aggtcatcgt gttgtagacg
     1981 aggaacgtgc cgaccacgag ggcgaggagg ctcagggcgc tgaggttcag ggaaaaggcc
     2041 cgggtcatct gctcgagggc gctgccgcgc gcgccggcgg gaaggatctc cgcctccggg
     2101 ggaaggatca cccggatccg ggaaagggca tcctcttcct cggccccccc ggggagcaga
     2161 aggtcgatcc gggacaaacg tcccaccttg ccgaggactt cctgggccgt cgcgatgtcc
     2221 gccacggcgg tggtctccag cgcctggcgg gtcacgtcgt ccccc
//
LOCUS       DATGYW010000518         1749 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_420347, whole genome shotgun sequence.
ACCESSION   DATGYW010000518 DATGYW010000000
VERSION     DATGYW010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420347"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..458
                     /locus_tag="VK429_07195"
     CDS             <1..458
                     /locus_tag="VK429_07195"
                     /inference="COORDINATES: protein motif:HMM:NF028121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter TatT component family protein"
                     /protein_id="HLN91631.1"
                     /translation="VPLLYWTGAAWSLAVSTSPDDPSLLADLPRIEALMRRALALDDR
                     YDAGAIHEYFVAFEGGRPEAMGGSVVRAQHHMEMAMALSAGKKISPLVTFAETVSVRT
                     QDRNGFLDLLDRALAFDARSGAPEYRMANLVSQRRARWLKGRVDELFLD"
     gene            439..1482
                     /gene="dctP"
                     /locus_tag="VK429_07200"
     CDS             439..1482
                     /gene="dctP"
                     /locus_tag="VK429_07200"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HLN91632.1"
                     /translation="MNCSSIRRSAAALLLLAVALSAPGTARSAPTVIKMATLAPEGSS
                     WFRVLQEMGEEWRKASGGAVTLRIYPGGIAGDEDAVIRKMRVGQIQAAAITGIGLAYL
                     EPSFYALHIPMMYESDEEFDSVRDRYAPVLERKLEEKGFVVLNWGDAGWVRFFSKDPV
                     VTPAEAKALKLFQWAGDTNLVQLYKETGFHPVPLSTNDLLPSLQTGMVNGFSSTPLVA
                     LAFQWFGLAPNMADLRYAPLTGATVIEKRAWEKIPPDLRPKLLEASRRAGMRLRAEIR
                     RLNQEALGVMVKNGLKVHKVPPEVQAQWRKMVEDVYPQVRGKIMPAEAFDTVKRYRDE
                     YRAAPRAGKGGVR"
     gene            1486..>1749
                     /locus_tag="VK429_07205"
     CDS             1486..>1749
                     /locus_tag="VK429_07205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91633.1"
                     /translation="MGPPPELATEGNRPPSTPAARIENAVSIGLLVGMALLPILEIVG
                     RRVWRTGVPGSSSLVQHATLWIGLLGGAIAARDDRLLSIGHLAD"
BASE COUNT          274 a          565 c          630 g          280 t
ORIGIN      
        1 acgtccccct gttgtactgg acgggcgccg cctggagcct tgccgtatcg acgtccccgg
       61 acgatccgtc gctgctggcg gacctacccc ggatcgaggc gctgatgcga agggcgctcg
      121 cgttggacga ccggtacgac gccggagcga tccacgaata tttcgtcgcc ttcgaggggg
      181 ggcgccccga ggcgatgggg ggatcggttg tacgggcaca gcatcatatg gagatggcga
      241 tggcgctgtc cgcgggaaag aagatctccc cgctggtcac cttcgccgag acggtgtcgg
      301 tccggaccca ggaccggaac ggtttcctgg acctcctcga ccgcgcgctc gccttcgatg
      361 cgcggtcggg ggcgccggag taccggatgg cgaacctcgt gtcccagcgc cgcgcgcgct
      421 ggctgaaagg gagggtggat gaactgttcc tcgattagac ggtcggcggc ggcgctcctg
      481 ttgctggcgg tggcgctgtc ggcgccaggc accgcgcggt cggcgccgac ggtcatcaag
      541 atggcgaccc tggctcccga gggatcgtcg tggttccgcg tcctccagga aatgggcgag
      601 gagtggagga aggcgtccgg cggcgcggtc acgctgcgca tctacccggg cggcatcgcg
      661 ggggacgagg acgcggtgat ccggaagatg cgggtcggcc agatccaggc ggccgcgatc
      721 accggaatcg ggctggcata cctcgagccc tccttctacg cgctgcacat cccgatgatg
      781 tacgaatccg acgaggagtt cgattccgtc cgggaccggt acgcgccggt cctcgagcga
      841 aagctggagg agaagggctt cgtcgtcctg aactggggcg acgcggggtg ggtccgcttc
      901 ttttcgaaag atcccgtggt gacgcccgcg gaggccaagg cgctcaagct tttccagtgg
      961 gcgggggaca cgaacctggt gcagttgtac aaggagacag ggttccaccc cgttcccctt
     1021 tccacgaacg acctgcttcc gagcctccag acggggatgg tgaacggctt cagcagtacc
     1081 ccgctggttg cgctggcctt ccagtggttc ggcctggccc ccaacatggc ggacctccgg
     1141 tacgccccac tgaccggggc cacggtgatc gaaaagcggg cgtgggagaa gatccctccg
     1201 gatctgcgcc cgaaacttct cgaggcgtcc cgccgggcgg ggatgcggct tcgcgccgag
     1261 atccgacgtc tcaaccagga ggcgctcggg gtgatggtga agaacggcct caaggtccac
     1321 aaggtgccgc cggaagtcca ggcgcagtgg cggaagatgg tggaggacgt ctacccccag
     1381 gtccgcggaa agatcatgcc ggcggaagcg ttcgacaccg tgaagaggta ccgcgacgaa
     1441 taccgcgccg cgccgcgcgc ggggaagggc ggggtgcgct aaccgttggg gccgcctccc
     1501 gaactcgcga cggaggggaa ccgccccccg tcgacgccgg cggcccgcat cgagaacgcc
     1561 gtttcgatcg gcctcctcgt cggcatggcg cttctcccga ttctcgagat cgtcgggcgc
     1621 cgcgtctggc gaaccggcgt ccccggttcg agctccctcg tccagcacgc gaccttgtgg
     1681 atcggcctgc tcggcggcgc gatcgccgcg cgggacgacc ggctcctttc gatcgggcat
     1741 ctcgcggac
//
LOCUS       DATGYW010000519         1946 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_513893, whole genome shotgun sequence.
ACCESSION   DATGYW010000519 DATGYW010000000
VERSION     DATGYW010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1946
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_513893"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..953)
                     /gene="murD"
                     /locus_tag="VK429_07210"
     CDS             complement(<1..953)
                     /gene="murD"
                     /locus_tag="VK429_07210"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HLN91634.1"
                     /translation="METFAKKPVIVAGAGRSGLLAARLLAGEGAHVTLRDDRPREDVE
                     ASLREAIPAGIAFLRGMPGEGEVRGNALLVVSPGVPRERLPLSALAAAGVPVWGELEL
                     GFRRFQGKVAAITGTNGKSTVTTLVGGMASGAFPRVFVGGNLGTPFVAAAGAPCDWGV
                     VEVSSFQLESIAAFRPRVAALLNLTEDHRDRYAAKEAYFEAKMAVFRNQDPSDTAVVN
                     ADDPEVTARLGSIRARILPFSVSRNLEEGAFLSGGEMVLRRPSGEERYPREVLKIPGL
                     QNVENALAAIAVARSMEIPPPAVLAELSRFPGLPHRVEFVRS"
     gene            complement(956..>1946)
                     /gene="mraY"
                     /locus_tag="VK429_07215"
     CDS             complement(956..>1946)
                     /gene="mraY"
                     /locus_tag="VK429_07215"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011416591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HLN91635.1"
                     /translation="AITALLISFLLGPWLIRVLRSHQIGQTIRLDGPESHLSKEGTPT
                     MGGLLIVLASVIPTLLWANLANHYIWIAVFVTLGFGAIGFADDYKKVIRKDTKGLSPR
                     RKLIAQFALAATAAALISMDIGIKDTVIIPFLKNVRPSLGFLYIPFIVLVIVGASNAV
                     NLTDGLDGLAIGPSIIAAGTYMLFAYLTGNVKIANYLQIQYVPGVGELTIFCGALAGA
                     GLGFLWFNAYPAQLFMGDTGSLALGGALGTVAVMVKQEVVLALVGGVFVVEALSVIFQ
                     VTSYKTRKKRIFRMAPIHHHFELQGWAEPKIIVRFWIISIILALLAISTLKIR"
BASE COUNT          360 a          673 c          615 g          298 t
ORIGIN      
        1 gatcggacga actccaccct gtgcggcagc cccgggaacc gcgaaagctc cgccagcacg
       61 gccggcggcg ggatctccat cgaacgggcg acggcgatcg ccgcgagggc gttctcaacg
      121 ttctgcagcc cggggatctt caggacttcc ctgggataac gctcctctcc ggaaggcctc
      181 cggagcacca tctccccacc ggaaaggaag gcgccctcct ccaggttccg cgataccgag
      241 aacgggagga tccgcgcacg gatcgagccc agccgcgcgg tcacctcggg gtcgtcggca
      301 ttgacgaccg cggtgtcgga gggatcctgg ttccggaaga cggccatctt ggcctcgaaa
      361 tacgcctcct tcgccgcata ccggtcacga tggtcctcgg tgaggttcag gagcgccgcc
      421 acccggggcc ggaaagccgc gatcgactca agctggaagc tggagacttc caccacgccc
      481 cagtcgcagg gagcccccgc ggcggcgacg aacggcgttc cgagattccc cccgacgaac
      541 accctcggga aggccccgga agccatcccc ccgacaagag tggtcaccgt cgactttccg
      601 ttggttcccg tgatcgccgc caccttcccc tggaacctcc tgaacccgag ctcgagctcg
      661 ccccacaccg ggacacccgc cgcggcgagg gccgaaagcg ggagccgctc ccgcgggacg
      721 ccgggcgaca cgacgagcaa ggcgttcccc cgaacctccc cttccccggg catcccgcgc
      781 aggaaggcga tcccggcggg gatcgcctcg cgcagcgacg cttcgacgtc ctcccggggc
      841 cggtcgtccc gcagcgttac gtgggctccc tccccggcca gcaggcgcgc cgcgaggagc
      901 cccgaccgcc cggcccccgc cacgatcacc ggtttcttcg cgaaagtttc catcgtcacc
      961 ggatcttcag cgtgctgatc gccagcagcg cgaggatgat cgagatgatc cagaaccgga
     1021 cgatgatctt cggctcggcc cacccctgca gctcgaaatg gtggtggatc ggcgccatcc
     1081 ggaagatccg tttcttccgg gtcttgtagg aggtcacctg gaagatcacg gagagggcct
     1141 ccaccacgaa aacccccccc accaatgcaa ggacgacttc ctgcttcacc atcaccgcca
     1201 ccgtccccag ggcgcctccc agggccaggg atcccgtgtc ccccatgaag agctgcgccg
     1261 ggtaggcgtt gaaccagagg aacccgagcc ctgcccccgc gagtgcgcca cagaagatcg
     1321 tcagttcccc gacgcccggg acgtactgga tctggaggta attcgcgatc ttaacgttgc
     1381 cggtgaggta ggcgaagagc atgtacgtcc cggcggcgat gatggaggga ccgatcgcca
     1441 gaccgtccag cccgtcggta aggttcaccg cgttggaggc ccccacgatc accagaacga
     1501 tgaacgggat gtagaggaac ccgagggagg ggcgaacgtt cttcaggaag gggatgatca
     1561 ccgtgtcctt gatgccgata tccatggaga tgagcgcggc ggccgttgcg gcaagggcga
     1621 actgggcgat cagttttcgg cgcgggctca gccccttcgt gtctttccgt atgaccttct
     1681 tgtagtcgtc ggcgaagccg atcgcgccga acccgagcgt cacgaacact gcgatccata
     1741 tgtagtgatt tgcgaggttc gcccataaca gtgtagggat gaccgacgcg aggacgatga
     1801 gcaatccccc catcgtcggc gtcccctcct tggagaggtg gctctccggg ccgtccagcc
     1861 ggatggtctg cccgatctgg tgactccgga gaacacggat cagccagggg ccgaggagaa
     1921 aggagatcag cagcgccgtt atcgcg
//
LOCUS       DATGYW010000520         2640 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_40056, whole genome shotgun sequence.
ACCESSION   DATGYW010000520 DATGYW010000000
VERSION     DATGYW010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2640
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40056"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..610
                     /locus_tag="VK429_07220"
     CDS             <1..610
                     /locus_tag="VK429_07220"
                     /inference="COORDINATES: protein motif:HMM:NF014879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HLN91636.1"
                     /translation="KGDILSDATALQVVCLLACRQAGQGLVGVPVTASRNVEKIAARF
                     GMEVVRTRTLPRSLMETAAGEGVAFAGDGAGGFVFPRFQPAFDGMFAIVKIMELLAAE
                     GRGLADILREVPPTVLIHRKIPCAWENKGSLMRMLTGHAKGKPSQFIDGVKVFEGEDW
                     ALVYPSQDEAYFHLVVESGDDRAASLLASEYTDLFASWGKKL"
     gene            607..1263
                     /locus_tag="VK429_07225"
     CDS             607..1263
                     /locus_tag="VK429_07225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013176925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HLN91637.1"
                     /translation="MTEARPLQVLAMEVGPLAENTYLVGHPASGKAVVIDPGDEADEI
                     LGQLARRGWTLDKILLTHGHFDHVGAVAALKERTGASVHIHPDDAEQLRTAGRQGAMF
                     GLHVPAPPPPDVLVREGDIVSLGDVAFRVLHTPGHTPGHVTYLCGDLAFVGDLIFEGS
                     IGRTDLPGGSLDELLRAVREKIFTLPRETILLPGHGPATTVGDEKRGNPFFTGEDAGR
                     "
     gene            1260..2462
                     /gene="coaBC"
                     /locus_tag="VK429_07230"
                     /pseudo
     CDS             1260..2462
                     /gene="coaBC"
                     /locus_tag="VK429_07230"
                     /inference="COORDINATES: protein motif:HMM:NF014494.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
     gene            2459..>2640
                     /locus_tag="VK429_07235"
     CDS             2459..>2640
                     /locus_tag="VK429_07235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91638.1"
                     /translation="MSGTVSRRVLAAWLREVGVDYVLRPTPGGETLEDIRMELTDCRR
                     CPLCAGRSTVVFGVGNP"
BASE COUNT          413 a          833 c          982 g          412 t
ORIGIN      
        1 gaagggggac atcctctccg acgcaaccgc gctgcaggtg gtctgcctcc tcgcctgccg
       61 ccaggcgggc cagggtctgg tgggagtccc ggtcaccgcc tcgcggaacg tggagaagat
      121 cgccgcgcgc ttcggaatgg aagtggtccg gacgcggacg ctgccgcggt cgctgatgga
      181 gacggcggcg ggggaggggg tcgccttcgc gggggacggc gcgggcgggt tcgttttccc
      241 gcgcttccag ccggccttcg acgggatgtt cgccatcgtg aagatcatgg aactgctcgc
      301 ggccgaggga cgggggctcg cggacatcct gcgtgaggtc cctccgaccg tactgatcca
      361 ccggaagatc ccctgcgcct gggagaacaa ggggtccctc atgcggatgc tgaccggtca
      421 cgccaagggg aagccgagcc agttcatcga cggggtgaag gtgttcgagg gggaggactg
      481 ggcgctggtc tacccgagcc aggacgaggc gtacttccac ctggtggtcg agtccgggga
      541 cgaccgcgcg gcttcgctgc tcgcctcgga gtacaccgac ctgttcgcgt cgtgggggaa
      601 gaagctgtga cggaggcccg gccgctccag gtgctggcga tggaggtcgg cccgctggcg
      661 gagaacacct acctcgtggg gcaccccgcg agcgggaagg cggtggtcat cgaccccggg
      721 gacgaggccg acgagatcct gggccagctg gccaggcggg ggtggaccct cgacaagatc
      781 cttctcaccc acgggcactt cgatcacgtg ggggcggtcg cggccctcaa ggaacggacg
      841 ggggcgagcg tccacattca tccggacgat gcggaacagt tgcggacggc gggcaggcaa
      901 ggtgcgatgt tcggactgca cgtccccgcg cctccgcccc ccgacgtgct ggtccgggag
      961 ggcgatatcg tttccctggg ggacgtcgcc ttccgcgttc tccacacgcc ggggcacacg
     1021 ccggggcacg tgacgtacct ttgcggggac ctcgccttcg tgggcgatct catcttcgag
     1081 gggtcgatcg gccggacgga tcttcccggc ggctccctcg acgagctgct gcgcgcggtc
     1141 cgtgagaaga tcttcacgtt gccccgggag acgattctcc ttcccgggca tggccctgcg
     1201 acgacggtgg gcgatgaaaa gcgcgggaac ccattcttta cgggggagga cgcaggaaga
     1261 tgaccacgct ctctggcaag gagatcgtcc tcggaatcac cggggggatc gcggcgtaca
     1321 aggggtgcga gatcgtccgc gcgctgcgca aggagggcgc gggcatccgg gtgatcctca
     1381 ccgcctccgg ggcgcggttc atcacgccgc tcaccctgta gaccctctcg aagaacccgg
     1441 tctataccga cctgttcgac ctcatcaccg agtccgagat cgggcatatc tccctcgcgc
     1501 agcgggcgaa ccttctgatg atcgcgccgg ccaccgcgaa catcctcggg aagatccgcg
     1561 gcggcatcgc ggacgacttg ctgtcgacgg ttgtgatggc caccgccgcg ccggtcctcc
     1621 tcgcgccggc gatgaacagc cagatgtacg cttcccctgc ggtgcgggaa aacgtggagg
     1681 tcctcctgga gcgggggttc acggtcgtcg accccgacga gggggaactc gcctgcggcg
     1741 cggtggggcc ggggcgcctg gccgacaccg agaagatcgt cgagatggcc cggattctcc
     1801 tggcggagaa gatcctctcc ggaaagaggg tcgtggtggg tgcgggaccc acggcggagg
     1861 atatcgaccc ggtccggttc ctcacgaacc ggtccagcgg caagatgggg ttcgccatgg
     1921 cggtcgccgc gcggcgattc ggcgcggacg tgaccctcgt cgcgggaccg tcccggctgc
     1981 cggatacccc gttcatgaag acggtccggg tgcggtccgc gaaggagatg atgggggcgg
     2041 tgggaaaggc ggcggaaacg gcggacgcgg tggtgatggc ggcggcggtg gccgactttc
     2101 gtccggagtc gccggcggcg caaaagatca agaaggagac gttcgacggg gggattaccc
     2161 tcgttcccac ggaggacatc ctcgcctccc tcgggcggtc ccggagaaac cgggtgctcg
     2221 tcgggttcgc ggcggagacg aacgaccttg cgggcaacgc ggtcgacaag ctgcggcgga
     2281 agaatctcga cgcgatcgtg gcgaacgacg tctcccggcc cgacatcggg ttcgggtccg
     2341 acagcaacga agtccgcgtc tacttctccg acgggacggc gctcgacctc gccatggcgg
     2401 ccaaggacgc gatcgcctcc gccgtctggc gggcggtatg ccggaagttc ctccctgcat
     2461 gagcggcacc gtttcccgaa gggtattggc ggcgtggctc cgggaggtcg gcgtggacta
     2521 cgttctccgg ccgacgccgg gcggggagac cctcgaggac atccggatgg aactgacgga
     2581 ctgtcgccga tgcccgcttt gcgcgggacg cagtacggtc gtcttcgggg tggggaaccc
//
LOCUS       DATGYW010000521         1853 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_473598, whole genome shotgun sequence.
ACCESSION   DATGYW010000521 DATGYW010000000
VERSION     DATGYW010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1853
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_473598"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..814)
                     /locus_tag="VK429_07240"
     CDS             complement(<1..814)
                     /locus_tag="VK429_07240"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN91639.1"
                     /translation="MTRRLASLWRFVRPERRTLAVTFLFSLLGTGASLYAPLLTRRLV
                     DDVILRGDWPAFPRLLATMVLFGAAGSVLGGFSSYLYTRGSSRILVAMRAALFEHLER
                     AEMRFFARTRVGEIVARLNNDMVEVQGVLVDVPLAFVTSVVRLGIASAILISMSWSLF
                     LIGNVLVPLGALGLWLTRDVITRMSRELREKNAAVGTHIIDTFTGIRLVRGSATEGQE
                     LRRFERENLSLVASVLRFQMVSSLSRGIPSFVLACSATLALLFGGYMVRDGAI"
     gene            complement(811..>1853)
                     /locus_tag="VK429_07245"
     CDS             complement(811..>1853)
                     /locus_tag="VK429_07245"
                     /inference="COORDINATES: protein motif:HMM:NF013316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HLN91640.1"
                     /translation="GEEAVMTRITVPISHPEEVEMLAAGGAGEFFCGYVPPEWLERYG
                     GAFWLNRRGPVAGNLLQRDDVSLLAERSHARGIPVYVTFNAPYYTPEQQEFLLPLVDR
                     LAEESGIDGVIVSDVGFLVELRRALPGLPVHASSVMASLNPGMVDFLAELGASRVIFP
                     RSLGVADIAALGKAAAGRLETEAFVLNEGCVFEEGYCMTTHRSVGALCVQLPDVPHRV
                     LPLTPEAAAKLDGEDRQPAREMMGAFRDWVWFQNGCGNSVTDRGIPNGPCGLCALYDL
                     AATGVTSLKISGRSSSGIRKLSSLRMVRAVLDMVEDGASREEAARGAVAIRNTPAFCN
                     AGYMCYYREKAS"
BASE COUNT          323 a          666 c          621 g          243 t
ORIGIN      
        1 tgatcgcccc gtcgcggacc atgtagccgc cgaacagcag ggcgagggtg gcggagcacg
       61 ccagaacgaa ggaggggatg ccgcgagaca gggaggagac catctggaac cgcaggacgg
      121 aggcgaccag cgacaggttc tcccgctcga acctccgcag ctcctgccct tccgtcgcgc
      181 tcccgcgaac cagccgtatc cccgtgaagg tgtcgatgat gtgcgtcccg accgcggcgt
      241 tcttctcccg cagctcccgg ctcatccggg tgatgacgtc ccgcgtgagc cacaggccca
      301 gcgcgcccag cggaacgagc acgttgccga tgaggaagag ggaccacgac atcgagatca
      361 ggatcgcgga ggcgatcccg agccggacga cgctcgtcac gaacgccagc ggcacgtcga
      421 ccaggacccc ctggacctcg accatgtcgt tgttcagccg cgccacgatc tcgccgaccc
      481 gggtccgggc gaagaaccgc atctccgccc gctcgaggtg ctcgaagagg gcggcccgca
      541 tggccacgag gatcctcgac gacccccggg tgtagagata gctgctgaaa ccgccaagga
      601 ccgatcccgc cgcgccgaac aggaccatgg tggcgagcag ccgggggaac gccggccagt
      661 cgccgcgcag gatgacgtcg tccaccagcc tcctcgtgag gagaggcgcg tacagcgacg
      721 cccccgtgcc caggagggag aagaggaagg tgacggcgag ggtccgccgc tccggccgga
      781 cgaatcgcca cagggaggcc agccgccgcg tcacgacgcc ttctcccggt agtagcacat
      841 gtaccccgcg ttgcagaacg ccggcgtgtt ccggatcgcg accgccccgc gcgccgcctc
      901 ctcgcgcgaa gcgccatctt ccaccatgtc gaggacggcg cggaccatcc ggaggctcga
      961 aagcttccgg atgccggaac tgctccggcc ggagatcttg agggaagtca cccccgtggc
     1021 ggccaggtcg tacagggcgc atagcccgca ggggccgttc gggatccccc ggtccgtgac
     1081 cgaattcccg cacccgttct ggaaccagac ccagtcccgg aacgcgccca tcatctcgcg
     1141 ggccggctgg cggtcctccc cgtcgagctt tgctgccgcc tccggggtca gcgggaggac
     1201 ccggtgcgga acgtcgggca gctgcacgca cagcgcgccc acgctgcggt gggtcgtcat
     1261 gcaataccct tcctcgaaca cgcacccttc gttcaggacg aacgcctcgg tctccagccg
     1321 ccccgcggcg gctttgccaa gcgcggcgat gtcggcgacc ccgaggctgc gggggaagat
     1381 cacgcggctt gcgccgagct ccgcgaggaa gtcgaccatc ccggggttga gcgacgccat
     1441 cacggagctt gcatggacgg ggaggcccgg caaggcgcgc ctcagctcca caaggaagcc
     1501 gacgtcggag acgatgacgc cgtcgatccc ggactcctcc gcgagccgat cgacgagcgg
     1561 gaggaggaat tcctgctgct ccggggtgta gtacggggcg ttgaacgtta catacacagg
     1621 aatgccgcgc gcgtgcgacc gctccgccag cagggaaacg tcgtcgcgct ggaggaggtt
     1681 ccccgccacg gggccgcggc ggttcagcca gaacgccccc ccgtaccgct ccagccactc
     1741 cggcgggacg taaccgcaga agaactcccc cgctccgccc gcggcgagca tctccacctc
     1801 ttccgggtgg ctgatcggga cggtgatcct cgtcatgacg gcttcctctc cgc
//
LOCUS       DATGYW010000522         2241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_191502, whole genome shotgun sequence.
ACCESSION   DATGYW010000522 DATGYW010000000
VERSION     DATGYW010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191502"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..435)
                     /locus_tag="VK429_07250"
     CDS             complement(<1..435)
                     /locus_tag="VK429_07250"
                     /inference="COORDINATES: protein motif:HMM:NF024773.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HLN91641.1"
                     /translation="MTSPLSPLFRPSRIAVIGASSNPDKMGFQIFRNIKEAGYAGEIV
                     PVNPKGEVILGVPSIKSAADLPEGTDLAVVIIPAKLVPGTMRELGGRKVKSAIVITGG
                     FAESGEAGAALQEEMTVAARAAGIRVVGPNCQGVNYPYHGVCA"
     gene            complement(483..1682)
                     /gene="serA"
                     /locus_tag="VK429_07255"
                     /pseudo
     CDS             complement(483..1682)
                     /gene="serA"
                     /locus_tag="VK429_07255"
                     /inference="COORDINATES: protein motif:HMM:NF008759.0"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
     gene            complement(1699..2034)
                     /locus_tag="VK429_07260"
     CDS             complement(1699..2034)
                     /locus_tag="VK429_07260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91642.1"
                     /translation="MTSARDITLAVNPPRAAFLNFPLGHTTGKACEPDLQRNILVEAL
                     SSFETMTVPGSVKELSFRWSEDGEWKARAFAEGDDRRPRHDTPQYQNDEDRRRAEQGC
                     FSPCPFCRC"
BASE COUNT          346 a          754 c          757 g          384 t
ORIGIN      
        1 ggcgcacacc ccgtggtacg ggtagttcac tccctggcag ttggggccga ccacgcggat
       61 gcccgccgcc cgcgccgcca ccgtcatctc ctcctggaga gcggctcccg cctccccgga
      121 ctcggcgaac ccgcccgtga tcacgatcgc cgacttcacc ttccgtcccc ccagttcccg
      181 catcgtcccg gggacgagct ttgccgggat gatcacgacc gcgaggtcgg tcccctcggg
      241 gaggtcggcg gcggatttga tggacgggac gcccaggatc acctctccct tcgggttcac
      301 ggggacgatc tcgccggcgt agccggcttc cttgatgttg cggaagatct ggaaccccat
      361 cttgtcgggg ttcgaggatg cgccgatcac ggcgatccgg gaggggcgaa acaggggaga
      421 caggggagag gtcatccgtg cgctcctcgc ttcctggggc tcttgggcaa gtgacggtcc
      481 ggtcagtaga cgaggcgggt gcggatcgtg ttggggatcc gccggagttc ctccacgagc
      541 ccgacgtcgc acccctgggc gacgtcgatc agcgcgtacc ccaggtggcc gcgcgtctcg
      601 agccgctgcc cggcgatgtt cacgccgttc cgcgcgaaga tgtcgttgat cttcgccagc
      661 atcccgggga ggttctcatg gacgtgggcg aatcggtggc gctggggagc cgaggaggga
      721 gacaggaccg gaaagttcac gctcgtggag gtgctccccg tcgccaggta ttcgagaagc
      781 cccgccgcca cgaatcctcc gatcccctgc tgtgcctcct cggtcgagcc gccgatgtgg
      841 ggggtaagga tcacgttcgg gagcccctgg agcggcgagg agaaggggtc cttgttggac
      901 cggggctcct ccgggaatac gtccaccgcg gcgccgcgga ccttcccggc gcgcacgttc
      961 cgggcgagcg cctccacgtc caccacgaag ccgcggctca ggttcaggaa gatcaccccg
     1021 tccttcatcg ctgtgaattc ccgttccccg acgaggttcc ggttttcctc ccgcccgtca
     1081 acgtgtatgg tgacgatgtc cgagacccgt agaagttcct ccagggagca cttccgggcg
     1141 ttccccagcg gaagcttctc cacgaggtcg tggtagttca cctccatccc catcgcttcc
     1201 gcgaggacgg agagctggga tccgatgttc ccgtacccga cgatcccgag cttcttcccg
     1261 cgaatctcgt ggaacccctc cgaggacttc ccccagatcc cccggtggag gtccgcgctg
     1321 cggtcgagaa ccccgcgcag gagcaggatc atctcgccaa gggcaagttc gaccacgctg
     1381 cgggtgttgc tgtagggggc gttgaagacc gccaccccgt gccggccgca cgcctcgagg
     1441 tcgacctgtt cggtcccgat gcagaacgcg ccgatggcca gaagatccgg ggcgcgttcc
     1501 agaaggtcgg cggtcacccg ggttttcgac cggatgccga gaacggagac gtccccgatt
     1561 tcctgagcga gcaccttccg gggagggctg tgcggtaccc gctccacggc atgcccggcc
     1621 gccgcgaaga tcgcccccgc gtcggggtgg atgttctcca gcagcaggac cttcatctcg
     1681 ttccccgggg cgcgaagatc agcagcggca gaaggggcag ggggagaaac acccttgttc
     1741 cgcccggcgg cggtcctcgt cgttctggta ttgcggggtg tcgtggcggg gtctccggtc
     1801 gtccccttcc gcgaacgccc ttgctttcca ctccccgtcc tccgaccagc ggaacgaaag
     1861 ctccttcacg gagcccggga ccgtcatcgt ctcgaaggac gagagcgcct cgacgaggat
     1921 gttgcgctgc agatcgggct cgcacgcctt gccggtcgtg tgaccgaggg ggaagttgag
     1981 aaacgccgcg cggggagggt tgaccgccag cgtgatgtcc cgtgcgctcg tcatgcagag
     2041 cgtcgggatc ccggcggcct cggcgtgtct tgcgaccagt cccacggact ggtggcagac
     2101 aggtcaaacg ggtaccagca ggacgacgtc aacgccgtcc tcgaggaacc gggcggtcag
     2161 acgaggggcg agctcctctg tgactcggcg ggaggagtag atccctccca tgaacgtgtg
     2221 gaagcggctc gccagtcccc c
//
LOCUS       DATGYW010000523         3079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_316266, whole genome shotgun sequence.
ACCESSION   DATGYW010000523 DATGYW010000000
VERSION     DATGYW010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3079
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316266"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1907
                     /locus_tag="VK429_07265"
     CDS             <1..1907
                     /locus_tag="VK429_07265"
                     /inference="COORDINATES: protein motif:HMM:NF024779.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4105 domain-containing protein"
                     /protein_id="HLN91643.1"
                     /translation="RRRGARPFFLFPLLFLFLLPSPARSGTDDYLAELKKTAEQRRLQ
                     DDRYWDILLFYKPAAGGRKSLVDDPRFFLAPGGKRDPGAELSATLGAMFDNSISPPVR
                     CRFPARYEWLKETLSIDPVRLPAPECPVLDNTLRAINPKSASLIFASGHMNAPASMFG
                     HTFLRLDGDYESPLLSYAVNYAATINPKDGGIAYAFKGIFGYYPGYYSILPYYVKVRE
                     YASMEQRDLWEYRTNLTETEVRRMTLHILEMEGIYADYYFLDENCSYDLLFLLEAARP
                     SVTLTDRHKGFFAAPIDTLRSVLAEGLINNVVFRPSTARTIRHKASEAGEEEVDMAKS
                     LASGDAAPSDVVEGPLPANGKVRVLDLASDFTNYLYLKREIPKDVYQGRYLRILEARS
                     TVAGPPPESRPLPVPAPPESGHLVSRASLAGGVRDGHSFLEIAYRPAYHSLEDPAEGF
                     NDGSQIVFAEAAIRWYPRDEKVRLQRLDLIDIVSLAPRDAFFRPVSWKVQTGFATRDF
                     PGDVEALVYALNPGGGFAWKVPPLGIVFLLAETDLALSGRYDHSFTLGMGGSAGIARP
                     LSDRWGLLAQARYIYGVLGDREGGRRFTASLKVPVRLSRNRSLVLDGEHAEGPSVHAG
                     TIRLTWNAHF"
     gene            2011..2562
                     /locus_tag="VK429_07270"
     CDS             2011..2562
                     /locus_tag="VK429_07270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91644.1"
                     /translation="MPNEENRVIAHLRAQMKSAHWLLEETLSDVSDEMVRFAPPGKAL
                     PIGAAYVHYVSGEDSMIHSVFKGVAPLMAGPWAGRTGVSEPPPGSGDDWVPRFEAWSR
                     RVRVDLPAFRAYAKAVYKATDGYLATLADSELTREVDLSAIGMGKQTVGFILDNVLLG
                     HAYCHCGEISALKGVQGKKGYPF"
     gene            complement(2525..>3079)
                     /locus_tag="VK429_07275"
     CDS             complement(2525..>3079)
                     /locus_tag="VK429_07275"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLN91645.1"
                     /translation="TGDVAFLLGGRYPGGVVTGVDLSAPMLAIARERNRFTNVRFERG
                     DLCDLPFPDGSADVVTGSYALRNAPDLRKTVAEVRRVLSPDGVAAFLDFSNPEGSLPR
                     HLQYLLLRSWCGLWGLLLHGSPEIHGYIAESLRVFPDRNRLREIFREQRLAMVTCRRF
                     FLGITGLIVLRPIRTDTPSFPAPP"
BASE COUNT          532 a         1048 c          977 g          522 t
ORIGIN      
        1 tgcgccgccg cggcgcgcgc cccttcttcc tttttccact tcttttcctt ttcctgctcc
       61 cctcccccgc gcggtcggga accgacgatt acctcgccga actgaagaaa accgcggagc
      121 agcgccgcct ccaggatgac cggtactggg acatcctcct cttttacaaa ccggcggcgg
      181 gaggccggaa gagcctcgtc gacgacccga gattcttcct ggcccccggc gggaagcggg
      241 atcccggcgc cgagctttcc gcgaccctcg gcgccatgtt cgacaattcc atttcgcctc
      301 ctgtccgttg ccgctttccc gcgcggtacg aatggctgaa ggagacgctg tcgatcgacc
      361 ccgtgcgtct ccccgcgccg gaatgccccg tgctcgacaa cacccttcgc gcgatcaacc
      421 cgaagtccgc ctccctgatc ttcgcctcgg ggcacatgaa cgccccggcg tcgatgttcg
      481 gccacacgtt cctgcgactg gacggcgact acgagagccc cctcctgtcc tatgcggtga
      541 actacgcggc gacgatcaac ccgaaggacg gcgggatcgc ctacgccttc aaggggatct
      601 tcgggtacta cccggggtac tactccatcc tcccctacta cgtgaaggtc cgggagtacg
      661 cgagcatgga gcagcgggac ctgtgggagt accggacgaa cctcacggag accgaggtcc
      721 ggcggatgac cctgcacatt ctggaaatgg agggcatcta cgcggactac tacttcctcg
      781 acgagaactg ttcgtacgac ctcctctttc tcctcgaggc cgcgcgccct tccgtcaccc
      841 tcaccgaccg gcacaaggga ttcttcgccg cgccgatcga cacgttgcgc agcgtgctgg
      901 cggaagggct gatcaacaac gtcgtcttcc ggccgtcgac cgcccgaacg atccgtcaca
      961 aggcctcgga ggcgggagag gaggaggtcg acatggcgaa gtcgctcgcc tcgggcgatg
     1021 ccgccccatc ggacgtggtc gaagggccgt tgccggccaa cggcaaggtc cgggtcctcg
     1081 acctcgcctc cgatttcacc aactatctgt acctcaaaag ggaaatcccg aaggatgtct
     1141 accaagggcg ttacctgcgg atcctcgagg cccggagcac ggtggcgggt ccgccgccag
     1201 aatcccgccc gcttcccgtc cccgctcccc cggagtccgg gcacctcgtg tcgagggcgt
     1261 ccctcgcggg gggagtccgc gacggccatt cgtttctcga gatcgcctac cgccccgcct
     1321 atcattccct ggaagacccc gcggaggggt tcaacgacgg ttcccagatc gtcttcgcgg
     1381 aggcggcgat ccgctggtat ccccgggacg aaaaggtccg cctgcagcga ctggatctca
     1441 tcgacatcgt gtctctcgcc ccccgggacg cctttttccg ccctgtctcc tggaaggtgc
     1501 agacgggatt cgcgacccgg gacttccccg gcgacgtcga ggcgctcgtg tatgcactga
     1561 atcccggggg cgggttcgcc tggaaggtgc ctcccctcgg gatcgtcttc ctcctcgcgg
     1621 aaacggacct tgcgctttcc ggaaggtacg accattcgtt cactctcggg atggggggct
     1681 ccgcggggat cgcccgcccg ctttccgaca gatggggtct cctcgcccag gccaggtaca
     1741 tctacggcgt gctcggcgac cgggaggggg ggcggcgatt cacggcgtcg ttgaaggtac
     1801 cggtccgcct ctcccggaac cggtcgctcg tcctggatgg ggaacacgcg gagggtccgt
     1861 cggttcatgc gggcacgatc cggctcacgt ggaacgccca cttctgacgg gcgaccccct
     1921 caccgacctg ccaacggtgg gagccgcccg atctactgac gtatataatc cacctgacag
     1981 gtgaagtcac cgcaccggag gaggcccgaa atgccgaacg aagagaaccg cgtgatcgcg
     2041 catctccgcg cgcagatgaa atccgcccac tggctcctgg aggagacgct ttcggacgtt
     2101 tcggacgaga tggtccgctt cgcccccccg gggaaggccc tccccatcgg ggccgcttac
     2161 gtccactacg tttcggggga ggactcgatg atccactccg tgttcaaggg agtcgctccg
     2221 ctaatggcgg gaccgtgggc cggaaggacc ggagtatcgg aaccgccgcc cgggtcgggg
     2281 gacgactggg tcccccggtt cgaggcgtgg agccggcggg tacgggtaga cctgccggcg
     2341 ttccgggcct acgcgaaggc ggtctacaag gcgacggacg gttatcttgc caccctcgcg
     2401 gactcggaac tgacgcggga ggtggacctg tccgcgatcg ggatggggaa gcagacggtc
     2461 ggattcatcc tggacaacgt gctgctcggc cacgcgtatt gccactgcgg ggagatctcc
     2521 gccctcaagg gggtgcaggg aaagaagggg tatccgttct gatcggacgc aggacaatca
     2581 atcccgtgat cccgaggaaa aaacgccggc aggtcaccat cgcgagccgt tgttcccgga
     2641 agatttcccg caaacgattc cggtccggga acacccgcag gctctcggca atatacccgt
     2701 ggatctccgg tgaaccgtgg aggaggagtc cccagagccc gcaccagctt cgcagcagaa
     2761 ggtactgcag atgccgcggg agggaacctt ccggattcga aaagtcgagg aatgcggcga
     2821 caccgtccgg tgaaagcacc cggcggacct cggcgacggt ttttcgaagg tcaggcgcgt
     2881 tgcgaagggc gtagctcccg gtcacgacat ccgcggaacc gtcgggaaac gggaggtcgc
     2941 acaggtcgcc ccgctcgaac cggacgttcg tgaaccggtt gcgctcccgc gcgatcgcca
     3001 gcatcggcgc ggagagatcc acccccgtga ccaccccgcc ggggtaccgt cccccgagga
     3061 gaaaagccac gtcgccggt
//
LOCUS       DATGYW010000524         6890 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_316699, whole genome shotgun sequence.
ACCESSION   DATGYW010000524 DATGYW010000000
VERSION     DATGYW010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 6890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6890
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316699"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            305..1816
                     /locus_tag="VK429_07280"
     CDS             305..1816
                     /locus_tag="VK429_07280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020677114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2779 domain-containing protein"
                     /protein_id="HLN91646.1"
                     /translation="MNTSRSMEGEMSPSDKTAYLSKSLYMRGLQCHKSLYLHKYQPEL
                     RGEASPELEALWKSGHEVGDFAHMLFPGGVVVPFDGLTKEEQLSKTREEIDRGTKAIY
                     EATFSFDDVFVKADIIVQNRGYWDLYEVKSSTSVKEHYWDDAAVQYYVLSGCGLPINK
                     AYLVHINNGYVRNGDIVPEELFVLQDISRIVREKQASIPEELAEMRAMLQGKVPKIDI
                     GPHCEDPYPCDFMEHCWRHVPEYSVFSLRGRGIDQWELYRQGVVRLQDVPLDSLNLMQ
                     RMQAEYFLDRKSRSDPAQIREFLKKVRYPVCFLDFETFGSAIPLFDGTRPYQQVPFQY
                     SLHRVDAEGEEARHFEYLATPGMDPREEIAEKLAGEIPFGACVIAYNMAFEKRVLREL
                     GEFLPKLRKRLNAVSDGMIDLMEPFKRRDIYHWRMNGSYSLKSVLPVLVPEMTYKDLE
                     ISDGAMASEAYFTMETIADPAELSRLRNALLEYCRQDTLGLVRLLEKLRAMKG"
     gene            complement(1892..3508)
                     /locus_tag="VK429_07285"
     CDS             complement(1892..3508)
                     /locus_tag="VK429_07285"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HLN91647.1"
                     /translation="MEERFNLQSANWISYVLDRRNQIPDIADPNLVRSTLLVFLGNLI
                     DGLYFHDESNANVIEKAVHMRDTVRGRLHHRYDDIVMELRDIFSKREWTAVLIPSGLQ
                     ESHPADPLLTSKTFLSKLSRTITTEPHLLLHLNETLQKDFTITDVYPPFHSALSKSTR
                     WPGILLWRRTGEPLFFPLPSEKPEDAIYWIFSRADHLAMPLGDLLTHHYVDAFPSCRI
                     DAGSRLTLLHLSDTHIGCKQSIERIVRVKELLKDYMNRNQGDSSVVFLLSGDIMQTPD
                     ENNVICANDFHDYLKDLQPGGQDPIFVLGNHDVRRKGVLRNRPASSSLFPAFDARIEW
                     IPDHPVGILCWNSSDGGTMARGRITGKQYRTIEERLNPFAGGKTNPVLISLLHHHPLQ
                     FRRIDPEMRRFHRKTLGASLRKYIGFAYEHMDGLSNAREFIRFCDSHGVKVILHGHKH
                     IPIAGKIPDHLLESPPILVFGAGSSVGKNTYLYRKLFNVDYEISWNEIVLDFRTHLLS
                     GRLMAETQYDKGRATMKTHHGFVSRSVIGP"
     gene            complement(3538..4425)
                     /locus_tag="VK429_07290"
     CDS             complement(3538..4425)
                     /locus_tag="VK429_07290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91648.1"
                     /translation="MEPKEKDFWDKAAIVLQPVGGLLAALAVAGLGFFGSQFIERRQS
                     EETRARFTSELISKREEADSALRKDMFVSIIQSFLRADSTSIDDRLLKLELLAYNFHE
                     SLNLKPLFFQLERDAVKSGGPKGNELRDRLSKVAREVTRKEMVVLEEAGKSFERTVDF
                     DDLVRNPGGIPLEPAMLTLNKVERNFVLVVKKVDVGQKQMQIRLEVKTRNEENGGYRT
                     DDAEFWVGYYDFPMIDHVRLSRDQRFAVILRNFGGGSARIAAVYFPGAYASLKEKPYV
                     QEMVKTLLQTNKPVEGAGR"
     gene            complement(4428..4757)
                     /locus_tag="VK429_07295"
     CDS             complement(4428..4757)
                     /locus_tag="VK429_07295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91649.1"
                     /translation="MRKIFLTMLCLAIPCASALAGEIYGTIKEGGKPVKGGTKVEVKC
                     AKGGYSAETDKLGSYRLFVPEQGKCTLSVLSIDGSPQMTVNSFEDSARYNLVLEKKGG
                     KSSLRSE"
     gene            4961..5620
                     /locus_tag="VK429_07300"
     CDS             4961..5620
                     /locus_tag="VK429_07300"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HLN91650.1"
                     /translation="MKPVPAPAMPPFRLPLVAAALLLSSVLFPGGAGAEWGLEITPYA
                     GYTIGGSFTDNATGANLDVQEDGSYGLVLDLADTPETQYELFYGLQRTKVTGGGTFGG
                     ETLFDLDIHYLHLGGTYMFTGDTVRPYIAGGLGATHFVPHGSGLDRKTYFSISLGGGV
                     KIPISGHVGLRFEGRGFMTILPDSTEIFCVSSGGAACNVKVQGDVLGQILLMAGITFS
                     L"
     gene            5629..6282
                     /locus_tag="VK429_07305"
     CDS             5629..6282
                     /locus_tag="VK429_07305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HLN91651.1"
                     /translation="MANAPASRERSPSPGEEIANSVSHAVGLAAALAATPVLVLSAVR
                     DGGAARIAGASVFAAAMVLLYFTSMLYHALPRNRAKEVFQVLDHAAIFLMIAGTYTPF
                     TLGVLRGTWGWTLFGLVWGLALAGIALTAAGGVRYPKLTTSLYLAMGWLILIAVKPLW
                     LRMPSEGLSWLLAGGIAYTVGVVFYSAKRVRYSHFVWHLFVLAGTACHFIAVLRFAA"
     gene            6297..6872
                     /locus_tag="VK429_07310"
     CDS             6297..6872
                     /locus_tag="VK429_07310"
                     /inference="COORDINATES: protein motif:HMM:NF014052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage II sporulation protein M"
                     /protein_id="HLN91652.1"
                     /translation="MRNLLNLSGMFDRTIKPYILILTLIFAVSFLAGILAPSSIRQQM
                     TEVFQAVVGNYRGLAGGMLFFNILVQNVMATIFVLISGVFVGIIPTFAIGSNAFGLGV
                     LYRQAAEVAGYSKAALKVLPYGVFEIPALLIAASYGLWLGVTAVRRMRGKESTLLRVQ
                     LEHAFRRYFAIVFPLLVVAAAIETALILRLE"
BASE COUNT         1314 a         2008 c         2077 g         1491 t
ORIGIN      
        1 cccggccttc tcttcctcgg cgatcccggc aagggcgacc gctgcggcca caccaatcag
       61 tgccaccatg gtgatgaaag cgacgccgaa cccgaccacc agctcttcca tgccgagaag
      121 ttccatcgtg ctcacctcct tccctacggt ttcaatctat tccggaagga ggggaatttc
      181 cgataggaac ctcacgaaac ctggccgttc cccccgataa ctccacctcc accgatgccg
      241 ggggggatcg tgaattcggc ccactcccgg gcgattcgga aatacaatag gagcacggag
      301 atgcgtgaac acatcccggt cgatggaggg ggagatgtcc ccgtcggaca agaccgccta
      361 cctgagcaag tcactctaca tgcgggggct ccagtgccac aaatccctgt atctccacaa
      421 atatcagccg gaactccggg gggaggcttc gccggagctc gaggcgctct ggaaaagcgg
      481 gcacgaggtc ggcgatttcg cgcacatgct gttcccggga ggggtggttg tccccttcga
      541 cggcttgacc aaggaggagc agctgtcgaa gacccgcgag gagatcgacc gcggcacgaa
      601 ggccatctac gaggcgacct tctcctttga cgacgtcttc gtgaaggccg acatcatcgt
      661 tcagaaccgc ggctactggg acctgtatga agtgaagagc tccacctccg taaaggagca
      721 ttactgggat gacgccgcgg tccagtatta cgttctctcc gggtgcgggc tccccatcaa
      781 caaggcgtat ctcgtgcaca tcaacaatgg ctacgtgcga aacggggaca tcgtcccgga
      841 ggaactgttc gtcctgcagg acatctccag aatcgtgagg gagaagcagg cgtccatccc
      901 ggaagagctg gccgagatgc gggcgatgct gcaggggaag gtgccgaaaa tcgacatcgg
      961 gccccactgc gaggacccgt acccatgcga cttcatggag cactgttggc gtcacgtgcc
     1021 cgaatattcc gtcttctccc tgcgggggcg tgggatcgat cagtgggagc tgtaccggca
     1081 gggagtcgtc aggctgcagg atgtcccgct cgattcgctg aacctgatgc agagaatgca
     1141 ggccgagtac ttcctggaca ggaagtcgcg ctcagatccg gcgcagatcc gggagttcct
     1201 caagaaggtc cggtatccgg tttgcttcct tgacttcgag acgttcggct cggccatccc
     1261 gctgttcgac gggacgcggc cctaccagca ggtgccgttc caatactccc tgcaccgcgt
     1321 cgacgcggaa ggggaggagg caaggcactt cgaatatctg gcgacccccg ggatggaccc
     1381 ccgggaggag atcgcggaaa agctggcggg cgagatcccc ttcggtgcgt gcgtgatcgc
     1441 ctacaacatg gctttcgaga aacgggtgct gagggagttg ggggaattcc tcccgaagct
     1501 ccgcaaacgc ctgaacgcgg tgagcgacgg gatgatcgac ctgatggagc cgttcaagcg
     1561 gcgcgacatc taccactggc ggatgaacgg gtcgtactcg ctgaaatccg tcctgccggt
     1621 ccttgtgccc gagatgacgt acaaagacct ggagatcagc gacggggcga tggcgtcgga
     1681 ggcgtacttc accatggaaa cgatcgcgga ccccgcggag ctgtccaggc tgcgcaatgc
     1741 gttgctggaa tattgcagac aggacaccct ggggctcgtc cgtctgctgg agaagttgcg
     1801 ggccatgaag gggtagggag gcgaagggga agcctcgttc gatgtccaac ccggcggtga
     1861 tgggtcggag gaacggaggc caggggtcct ttcatggtcc gatgacggac cgggatacga
     1921 atccgtgatg ggttttcatc gtcgcccgtc ccttgtcata ttgcgtttcc gccatcagtc
     1981 tccccgacag gaggtgcgtc cggaagtcga gaacgatctc gttccatgag atttcatagt
     2041 ccacattgaa cagtttcctg taaagatacg tgtttttccc cacggaactt ccagccccga
     2101 atacaaggat cggcgggctt tccagcagat ggtcgggtat tttccccgcg atgggtatgt
     2161 gtttgtggcc gtgaaggatt accttgacgc catgggagtc gcagaagcgg ataaattccc
     2221 gtgcattcga caaaccgtcc atgtgctcgt aggcgaatcc gatgtacttg cgcaaggatg
     2281 ccccgagggt cttcctgtgg aatctgcgca tctcgggatc gatccggcgg aactgcaggg
     2341 gatgatgatg cagcagggag atcagtacgg gattggtttt tccgccggcg aagggattca
     2401 accgttcttc gatggtcctg tattgcttcc ccgtgattct ccctcgtgcc atcgttccgc
     2461 catcggagga attccagcag agaatcccga caggatgatc cgggatccat tcgatcctgg
     2521 cgtcgaatgc gggaaacagg gacgaggagg cgggtcgatt ccgcaatacc cctttccttc
     2581 gcacatcgtg atttccaagg acgaagatcg gatcctgtcc gccaggttgc aggtctttca
     2641 ggtaatcatg gaagtcgttc gcgcagatca cgttgttctc gtccggtgtc tgcatgatgt
     2701 ctccgctcag cagaaacacg acggacgaat cgccttggtt tctattcata taatccttca
     2761 gaagctcctt taccctgacg atcctctcga tggattgttt gcatccgata tgggtgtcgc
     2821 tcaggtgcag caacgtcagt cgggagccgg catcgatcct gcaggaagga aaagcgtcca
     2881 cgtaatgatg cgtcaggaga tcccccagcg gcatcgcgag gtgatccgcc ctggagaata
     2941 tccagtaaat ggcatcttcg ggtttttccg agggaagagg gaaaaacaga ggttcgccgg
     3001 ttctgcgcca gagcagaatt cccggccatc gggtggattt cgacagggcg gagtggaagg
     3061 gcgggtatac gtccgtgatg gtgaaatcct tctggagagt ttcgttcagg tggaggagga
     3121 gatgcggttc ggtcgtgatg gtgcgggaca atttcgacag gaaggttttt gatgtcaaga
     3181 gcggatcggc gggatgggat tcctggagcc cggacgggat gagaaccgcg gtccactccc
     3241 tttttgaaaa gatatcgcgt agttccatga cgatatcatc gtaccggtgg tgcagcctcc
     3301 cccggaccgt gtctctcatg tgaaccgctt tttcgatgac gttcgcattc gattcgtcgt
     3361 ggaaatacag cccgtcgatg aggttcccga ggaacacgag caacgtgctc cttacgagat
     3421 tcggatccgc gatgtctggg atctggttgc gcctgtccag gacgtacgaa atccagttgg
     3481 ccgactgcag gttgaatctt tcctccacgc gggcctccgc acggaccctg aaaggggcta
     3541 ccggcctgct ccttcaacag gtttattggt ctgaaggaga gtcttgacca tttcctggac
     3601 gtacggtttt tccttcaggc tcgcgtacgc ccccgggaag tagacggcgg cgattcttgc
     3661 gcttcctccg ccgaagtttc tcaggatgac cgcgaaccgc tggtcgcggg agagccggac
     3721 atggtcgatc atggggaaat cgtaataacc gacccagaac tcggcgtcgt cggtccggta
     3781 tccgccgttc tcctcgttcc gggtctttac ctccagccgg atctgcatct gcttttgccc
     3841 gacatccact ttctttacca cgagcacgaa attgcgctct accttgttga gcgtcaacat
     3901 cgccggctcc agcgggatcc cgccgggatt gcggacgaga tcgtcgaaat cgacggtgcg
     3961 ctcgaaggat tttcccgcct cttccagcac caccatctcc tttcgggtca cttcccgcgc
     4021 caccttgctc agccggtccc gcagttcgtt ccccttcggc ccgccggatt tgacggcatc
     4081 ccgctcgagt tggaagaaga gcggcttgag gtttaacgac tcatggaagt tgtacgccag
     4141 caattccagc ttcagcagac gatcatcgat ggacgtcgag tcggcccgga ggaacgactg
     4201 gatgatggac acgaacatgt ccttgcgcaa ggcgctatcc gcctcctcgc gtttgctgat
     4261 caactcggat gtaaaccggg cacgcgtctc ctcggactgg cgtcgttcga tgaattgcga
     4321 gccgaagaaa ccgagtccgg ccacggccag ggcagccagc aacccgccga ccggttggag
     4381 gacgatcgcc gccttgtccc agaaatcctt ttccttgggc tccatgctca ctcgctccgc
     4441 aaggaagact ttccgccctt tttctcgagg acgaggttgt accgcgcgga atcctcgaac
     4501 gagttaacgg tcatctgcgg agagccgtca atggataaga ccgagagggt gcattttccc
     4561 tgttccggca caaacaggcg atacgatccg agtttgtccg tctccgcgct gtagcccccc
     4621 ttggcacatt tgacctcgac cttcgtccct cccttgaccg gtttcccacc ctccttgatc
     4681 gtcccgtaga tctctccggc cagtgcggat gcgcagggaa tcgcgagaca aagcatcgtc
     4741 aagaatattt ttctcatcgg aacctccttc cggggaatgc gggtctaatc acgtcatgga
     4801 tcgatgccat ccggtccgcc ataagagaag tatattgctt tcctcctcga atcgctctga
     4861 aaagcatgac cacaccttgt ccgctcgcga cattccaacc ggcaggcgtt gacgggggac
     4921 tccccctgca gttaaatgaa acggcactcc ggaggaaacc atgaaaccgg ttcccgcacc
     4981 cgccatgccc ccgttccgac ttccccttgt agcggccgcg ctcctccttt cgtcggtcct
     5041 gttcccgggg ggtgccggag cggaatgggg gttggagatc acgccgtacg ccggctacac
     5101 catcggcggc agttttacgg acaacgctac cggcgccaat ctggacgtac aggaggatgg
     5161 cagttacggg ctcgtcctcg acctggcgga caccccggaa acccagtacg aactattcta
     5221 cgggcttcaa cggacgaagg tcaccggcgg tgggacgttc gggggggaaa ccctctttga
     5281 cctggacatc cattaccttc acctgggggg gacctacatg tttaccgggg atacggtccg
     5341 cccctacatc gccggggggc tcggcgccac ccactttgtg ccgcatggaa gcgggctgga
     5401 tcggaaaacg tacttttcca tctcgttggg cggcggcgtc aagataccga tctccggtca
     5461 cgtcggtctt cgcttcgagg ggagggggtt catgacgatc ctgccggact ccacggagat
     5521 cttctgcgtg tcgtccggcg gcgctgcgtg caatgtgaag gtccaggggg acgtgctcgg
     5581 tcagatcctg ctgatggcgg gaatcacctt ttcattgtga tgaaagctat ggccaacgca
     5641 cccgcttcac gagaacgttc cccgtccccc ggggaggaaa tcgcaaacag cgtcagccat
     5701 gccgtcggct tggcggcggc gttggctgcc acccctgttc tcgttctttc cgcagtccgg
     5761 gatggcggcg cagcgcggat tgcaggcgcg agcgtcttcg ctgcagcaat ggtgttgctg
     5821 tacttcacat ccatgctcta ccatgcgttg ccaaggaatc gcgccaagga agtatttcag
     5881 gttcttgacc acgcggcgat cttcctcatg atcgccggca cgtatacgcc gttcacactc
     5941 ggtgtgcttc gcggcacgtg gggctggacg ctgttcgggc tcgtgtgggg tttggccctt
     6001 gcaggtatcg cacttacggc ggcaggaggg gtacggtatc cgaaactcac gacgtccctg
     6061 tatctcgcca tgggatggct catccttatc gcggtaaagc cgttgtggct ccgtatgcca
     6121 tcggagggcc tgtcctggct attggcaggc ggtatcgcat atacggtggg tgtggtgttc
     6181 tattcggcca agcgggtccg ttacagccac ttcgtctggc acctgttcgt acttgcgggc
     6241 accgcgtgtc atttcatcgc ggtgctgcgg ttcgcggcct gactaccggg atgggcttgc
     6301 ggaacctctt gaatctctcc gggatgttcg accggaccat aaaaccgtac atattgatcc
     6361 tgaccctgat tttcgccgtc tctttcctgg cgggaatcct ggctccctcg tcgatcagac
     6421 agcagatgac ggaggtgttc caggctgttg ttggcaacta tcgggggctt gccgggggga
     6481 tgctcttctt caatatcctc gtccagaatg tgatggcgac gatatttgtg ctcatctccg
     6541 gcgtgttcgt ggggatcatc ccgacattcg ccatcggctc caacgcattt ggtctgggtg
     6601 tgctgtatcg ccaggcagcc gaggttgccg gttactcgaa ggcggcgctc aaggttttgc
     6661 cgtacggggt attcgagatc cccgcgcttc tcatcgcggc ctcctacggc ctgtggctcg
     6721 gcgtaacggc cgtccgtagg atgcggggga aggaaagcac cctcctcaga gtccaattgg
     6781 agcatgcctt ccgacggtac ttcgccatcg tgttccccct cctcgttgtt gcggcggcga
     6841 tcgagacggc cctcatcctc cggctggagt agggaatgcc gcggggaacc
//
LOCUS       DATGYW010000525         2186 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_316757, whole genome shotgun sequence.
ACCESSION   DATGYW010000525 DATGYW010000000
VERSION     DATGYW010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2186
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316757"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1906)
                     /gene="carB"
                     /locus_tag="VK429_07315"
     CDS             complement(<1..1906)
                     /gene="carB"
                     /locus_tag="VK429_07315"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011736383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HLN91653.1"
                     /translation="MPKRGDLKKIMLIGSGPIIIGQACEFDYSGTQACKALREEGYEV
                     VLANSNPATIMTDTDFADRTYIEPITPDIVAKIIERERPDALLPTIGGQTGLNIAISL
                     HEMGILQKFGVELIGASFEAIQKAEDRNLFRKAMEKLGLTVPRSGYIRSLEEALRVIP
                     DIGYPAIIRPSFTLGGTGAGIAYNREEFEEAIRWALDASPKHTVLVEQSVIGWKEFEL
                     EVMRDLADNVVIVCSIENLDPMGVHTGDSITVAPAQTLTDKEYQIMRNAALRIIREIG
                     VDTGGSNIQFAVHPETGEMVIIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDE
                     IRNDITRETPASFEPTIDYVVTKIPRFTFEKFPQTEDLLGTQMKSVGEVMAIGRTFKE
                     SLQKAIRSLENSVYGFEEMIPPAIPPNPAARLKTITEKLRKPNSRRLFYIGEAFRDGW
                     TVEEIREATGIDPWFLENIRQIIAMEGEIRERAEAFRKEAAKDPVAFGAFLRHMKGNG
                     FSDRRLSKLLGVGEDDVRRIRYAAGVRAVFKRVDTCGAEFEAHTPYLYSTYERESEGN
                     PTERKKVVILGGGPNRIGQGIEFDYCCVHACMALRDLGYETIMVNCNPETVSTDYDTS
                     DKLYFEPLTVE"
     gene            complement(1906..>2186)
                     /locus_tag="VK429_07320"
     CDS             complement(1906..>2186)
                     /locus_tag="VK429_07320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLN91654.1"
                     /translation="FLFVGDDGIATRGVLVRHLVLPGRVGETKAVLARLSERHGPELP
                     LSLMGQYFPAWRAAAADGFDRRVTRKEYDRAIEAASLLGFRNVFIQER"
BASE COUNT          340 a          731 c          677 g          438 t
ORIGIN      
        1 cctcgacggt gagcggctcg aagtacagct tgtccgaggt gtcgtagtcg gtcgagacgg
       61 tctcggggtt gcagttgacc atgatcgtct cgtagcccag gtcgcgcagc gccatgcagg
      121 cgtggacgca gcagtagtcg aactcgatcc cctggccgat ccggttcgga cctccgccga
      181 ggatcaccac ttttttcctt tctgtcgggt tcccctcgct ctcgcgctcg tacgtcgagt
      241 agaggtacgg ggtgtgcgcc tcgaactccg cgccgcaggt gtcgacccgc ttgaagaccg
      301 cccgcacccc cgcggcgtac cggatccggc gcacgtcgtc ctctccgacc ccaaggagct
      361 tcgagagtcg acggtcggag aagccgttcc ctttcatgtg gcgaaggaag gccccgaacg
      421 cgaccggatc ctttgccgcc tccttccgga acgcctccgc cctctcgcgg atctcgccct
      481 ccatcgcgat gatctgccgg atattctcca ggaaccacgg gtcgatcccg gtcgcctccc
      541 ggatctcctc gaccgtccat ccgtcgcgaa acgcctcccc gatgtagaaa agacggcggg
      601 agttcggctt gcgcagtttt tcggtgatcg tcttcagacg ggccgccggg ttcggaggga
      661 ttgccggagg gatcatctcc tcgaagccgt acacgctgtt ctccagggac cggatcgcct
      721 tttgcagcga ctccttgaag gtgcggccga tcgccatcac ctcccccacc gatttcatct
      781 gcgtgccgag gagatcctct gtctgcggga acttctcgaa cgtgaaccgg gggatcttcg
      841 tcaccacgta gtcgatggtc ggttcgaagg aggcgggtgt ttcccgcgtg atgtcgttgc
      901 ggatctcgtc gagggtgtag ccgacggcga gcttggccgc gatcttcgcg atgggaaacc
      961 cggtggcctt cgacgccagc gccgaggagc gggagacgcg cgggttcatc tcgatgatga
     1021 ccatttcgcc cgtctccggg tggacggcga actggatgtt gctccctccg gtgtcgaccc
     1081 cgatctcccg gatgatgcgc aaggccgcgt tgcgcatgat ctggtactcc ttgtcggtca
     1141 gcgtctgcgc cggggccacg gtgatcgagt cgccggtgtg cactcccatc gggtcgaggt
     1201 tttcgatcga gcagacgatg accacgttgt ccgccaggtc gcgcatcacc tcgagctcga
     1261 actccttcca cccgatgacc gactgctcga cgaggacggt gtgcttcggc gaggcgtcca
     1321 gcgcccagcg gatcgcctcc tcgaattcct cgcggttgta ggcgatcccc gcacctgttc
     1381 ctccgagcgt gaaggagggg cggatgatcg ccgggtaccc gatatccggg atgacccgga
     1441 gggcctcctc gagggagcgg atgtacccgg aacgggggac tgtcagcccc agcttctcca
     1501 tcgccttccg gaagaggttc cggtcctccg ccttctggat cgcttcaaag ctcgccccga
     1561 tcagttccac gccgaacttc tgcaaaatcc ccatctcgtg cagggaaatg gcgatgttca
     1621 gcccggtctg tcccccgatg gtgggcagaa gcgcgtcggg gcgttcccgc tcgatgatct
     1681 tcgccacgat atccggggtg atcggctcga tgtaggtccg gtcggcgaaa tcggtgtcgg
     1741 tcatgatcgt ggccgggttg ctgttggcga ggacgacctc gtacccctct tctcgcaggg
     1801 ccttgcacgc ctgggtcccc gagtagtcga actcgcacgc ctgcccgatg atgatcggac
     1861 cggagccgat gagcatgatc tttttcaggt cgccgcgctt gggcactatc tctcctgtat
     1921 gaacacgttt cggaatccga gcagcgaagc ggcctcgatc gcccggtcgt actcttttcg
     1981 cgtcaccctc cggtcgaacc cgtcggccgc cgccgcccgc cacgcgggga aatattgccc
     2041 catcagggac aggggaagtt ccggaccgtg cctttccgac agccgcgcca gcaccgcctt
     2101 cgtctccccc acccttcccg gaaggacgag atgccggacg aggacccccc gcgtggcgat
     2161 cccgtcgtct cccacgaaga ggaacc
//
LOCUS       DATGYW010000526         1661 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_316793, whole genome shotgun sequence.
ACCESSION   DATGYW010000526 DATGYW010000000
VERSION     DATGYW010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316793"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1157
                     /locus_tag="VK429_07325"
     CDS             <1..1157
                     /locus_tag="VK429_07325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012646033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HLN91655.1"
                     /translation="STGTVGSPKSIPVTLTVTSPAAAFPQISLSPLAGGFVLPVHVTH
                     AGDGSGRIFVVEQAGRIRILDNGVVLPVPFLDLASLASPRLVSGGEQGLLSVAFPPGF
                     TTKRYFYVNYTRIQDGATVVARYRVSIGDNNVADPASEEIILTVFQPFANHNGGQLAF
                     GPDGYLYIGMGDGGSGGDPQNNGQSPGTLLGKLLRIDVESGVQPYRVPPDNPFLLSAG
                     YLPEIWALGLRNPWRFSFDRGTGDLYIGDVGQGNVEEIDFQPAGEGGQNYGWNIMEGD
                     SCYPPGTVGCNRAGLAPPVFVYDHSHGCSVTGGHVYRGSAIPALQGVYLFGDLCSTRI
                     WGIRKNGAAWDNALLAENTALTITTFGEDASGNVYVVNYANGELLRIVSP"
     gene            1448..>1661
                     /locus_tag="VK429_07330"
     CDS             1448..>1661
                     /locus_tag="VK429_07330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019885685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HLN91656.1"
                     /translation="MRVAVSGSTGLVGSALVAVLSAAGHEVVPLVRTAPSPGEKAVRW
                     DPGKGEIDAAGLEGLDAVVHVAGENIA"
BASE COUNT          259 a          555 c          552 g          295 t
ORIGIN      
        1 cctcgacggg aacggtcggc tcaccgaaga gcataccggt taccctcacg gtcacgagtc
       61 ccgccgcggc ttttccgcag atctccctct ctcctctggc gggaggattc gtcctgccgg
      121 tccacgtcac ccatgcgggg gacggcagcg gccggatctt cgtggtggag caggcggggc
      181 ggatccggat cctcgacaac ggggtggtgc tcccggtccc attccttgac ctggcttccc
      241 tggcttctcc ccggcttgtc tcgggcggcg agcagggcct cctgagcgtg gcgttccccc
      301 ccgggttcac cacgaagcgc tatttttatg tgaattacac caggatccag gacggcgcca
      361 cggtggtcgc ccggtaccgc gtctccatcg gcgacaataa cgtggccgat cccgcgagcg
      421 aggaaatcat cctgaccgtt ttccaaccgt tcgcgaacca taacgggggg cagctcgcgt
      481 tcggtcccga cgggtatctc tacatcggga tgggggacgg gggctcgggt ggcgacccgc
      541 agaacaacgg ccagtccccc ggcaccctgc ttggaaaact cctgcggatc gacgtcgagt
      601 ccggcgtgca accgtacagg gtccccccgg acaacccgtt tctcctctcc gccggctacc
      661 tgccggagat ctgggcgctc gggctgcgga acccgtggcg cttctccttc gaccgcggga
      721 cgggggacct ctatatcggc gacgtgggac aggggaacgt cgaggagatc gatttccagc
      781 cggccggcga agggggacaa aactacggct ggaacatcat ggagggcgac agttgctacc
      841 cccccgggac cgtgggctgc aaccgcgccg gccttgcccc cccggtcttc gtatacgatc
      901 actcgcacgg gtgctccgtg accggcggcc atgtgtaccg cgggtcggcg atccccgccc
      961 tgcagggggt ttatctcttc ggggaccttt gcagcacacg gatctggggg atcaggaaga
     1021 acggcgccgc ctgggacaac gcgctgcttg cggagaacac ggcgctgacc ataaccacct
     1081 tcggcgagga cgcgtcggga aacgtatacg tggtgaatta cgcgaacggc gaactcctga
     1141 ggatcgtttc tccgtgagac cgtgacggtg ccggttccgg cccgccgtgg cgctcccgtt
     1201 cgcggcacat ccacttcaag gcctccgcac ccggtttcgc tccgctcacg acccagctct
     1261 acctgcgcgg cggcgagacg agcgtgacgt tcgacctggt cctctccccc tcgaagcctc
     1321 cgtcccggtg agcgtcccct gcgggtaatg gactttgccc cgcgcgcttc cgaaaacgga
     1381 cggaacgatg ccgatccatc ttcaatcgcg gtaccatggc agggatcggg gaagggaggg
     1441 gtaacggatg cgcgtcgccg tttccggttc gacgggtctc gtcggttccg cgttggtggc
     1501 cgttctttcc gcggccggac atgaggttgt cccccttgtc cgaaccgcgc cctcccccgg
     1561 ggagaaggcg gtgcggtggg acccggggaa gggggagatc gatgcggcgg gactcgaggg
     1621 cctcgacgcc gtcgtccacg tcgcggggga gaacatcgcg t
//
LOCUS       DATGYW010000527         1864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_316818, whole genome shotgun sequence.
ACCESSION   DATGYW010000527 DATGYW010000000
VERSION     DATGYW010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1864
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316818"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(512..622)
                     /locus_tag="VK429_07335"
                     /pseudo
     CDS             complement(512..622)
                     /locus_tag="VK429_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_218233.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(762..855)
                     /locus_tag="VK429_07340"
     tRNA            complement(762..855)
                     /locus_tag="VK429_07340"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(818..820),aa:Ser,seq:gga)
     gene            complement(895..987)
                     /locus_tag="VK429_07345"
     tRNA            complement(895..987)
                     /locus_tag="VK429_07345"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(950..952),aa:Ser,seq:gct)
     gene            complement(1005..1092)
                     /locus_tag="VK429_07350"
     tRNA            complement(1005..1092)
                     /locus_tag="VK429_07350"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1056..1058),aa:Ser,seq:tga)
     gene            1229..>1864
                     /locus_tag="VK429_07355"
     CDS             1229..>1864
                     /locus_tag="VK429_07355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HLN91657.1"
                     /translation="MRFSDPQTSLLVRATNWLGDAVMTTPALAGVREGFPDARIVLLA
                     RPLVAELFRHHPDVDEVMVYERPGRHEGALGRLRLAGELRRRGFDGALLLQNAFDAAL
                     IAFLGRIPERAGYPTDGRRILLTLPVPLTPGILERHEVEYYLCLVEGLGIPRPVPAAL
                     KLGVTKQERETMAVRLASLGIGRGAPIVTINPGATYGSAKRWYPDRFAAVAD"
BASE COUNT          298 a          586 c          628 g          352 t
ORIGIN      
        1 gctcgacggc gggccgtacg acatcttcca gccggacctg ctcgcctcga acggcctcat
       61 ccacgcgcag atggtggagg tgctgggaaa ggcgaaaaaa tagggggggc ggcccgggga
      121 ccgtcccccc catctgcgtc gcgtgaaacg cgtgttactt cttgacccct tcgaggagcg
      181 ccaccccgta cttgtcgtgc gagaacgggt gcaccgtcgg gtgcaacgcg aacagccagc
      241 cgtggaagat ctccttccct ccctggaaca cctcgagctg ggcggcggga ttctccgggt
      301 tgttcgagtt ggacgagatc tggtccgccg ccatcgcgaa gtgcggcagg aagctcccga
      361 ccttcagcgt gaggtcggag tccggaacct tgaactcgga gttcaagggg atggtgaacg
      421 ccttcttgct cttcttctcc ttgtattcca cttcgatctt gacggctttc cacccggcct
      481 tcacggcgtc ggggacgacg accttcttct cgaccggggg cgcccctgcc tcgccgtgcg
      541 gggcgccggg catgccgggc atgccgggca tgccgggctg accgggcgcg ctctgggggg
      601 gcatcggcgg cgggggaggt tgctgcttct tgcaacctgt gcccgcgaaa gcgaccatca
      661 tgagaacagt gaccagcagc gtgaattttt tcatcgtgct cgttcctcct tcgatttggc
      721 gcgtgctgcc gcgcacgcgg tggttcgcaa cgttgcgatg gtggcggaga gggagggatt
      781 cgaaccctcg aggcgggtat aagccgccta cgcgatttcc agtcgcgttc cttcggccag
      841 ctcggacacc tctccgtacg gactatcttc acgaaaaacc ggtttcaaag attatggcgg
      901 agagggaggg attcgaaccc tcggtacagt tttacccgta caaccgctta gcaggcggtt
      961 gccttcagcc ggctcggcca cctctcccga tcgaactccc aacgtggcgg agggagcagg
     1021 attcgaacct gcggggcgtt gccgcccagc ggttttcaag accgccgcct tcagccgctc
     1081 ggccatccct ccacgaaaca tgtatttata ccagatccgg tcgccgcgag ggagggaaaa
     1141 aggggcccgg gacggcttcg tacccggatg gtatgatagc aaatcgggtc gagcgtccgg
     1201 cgtgttttcg ggaaagggcg gaatccgcat gcgtttcagc gatccacaga cgtcgttgct
     1261 ggtccgggcg acgaactggc tgggcgacgc ggtgatgacg acacccgcgc tggcaggcgt
     1321 tcgcgaaggc tttccggacg cccggatcgt cctgctcgcg cggcctctcg tggcggagtt
     1381 gttccgtcat catccggatg tggacgaggt gatggtctac gagcggcccg gacgccacga
     1441 gggcgccctc ggccgtctcc gcctggccgg ggagctgcgc cgccgcggat tcgacggggc
     1501 cttgcttctc cagaacgcgt tcgacgcggc attgatcgct tttctcggcc ggatcccgga
     1561 gcgggcgggg taccccaccg atggccggcg gatcctcctc accctgcccg ttccgttgac
     1621 ccccgggatc ctcgaacgcc acgaagtgga atattatctg tgccttgtcg aagggctggg
     1681 gatacctcgg cccgtgccgg cggcgttgaa actcggcgtg acgaagcagg agagggagac
     1741 gatggcggtt cgtctcgcgt ccctcggcat cgggcggggc gcgccgatcg tgacgatcaa
     1801 tccgggcgcg acgtacggat ccgcgaagcg gtggtacccg gaccggttcg ccgccgtcgc
     1861 ggac
//
LOCUS       DATGYW010000528         1881 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_192432, whole genome shotgun sequence.
ACCESSION   DATGYW010000528 DATGYW010000000
VERSION     DATGYW010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192432"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..350
                     /locus_tag="VK429_07360"
     CDS             135..350
                     /locus_tag="VK429_07360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91658.1"
                     /translation="MVKHPPIGTDTLVGDVLRNYPALREKVAELFGPECVSCRSNRHE
                     TIIYTSWHKGLDPEAVVRALNDALKGK"
     gene            453..1208
                     /locus_tag="VK429_07365"
     CDS             453..1208
                     /locus_tag="VK429_07365"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HLN91659.1"
                     /translation="MERPPGAKLIDKAVDVLFLCRDAAGPVGVTEAARRLGMPKSSAA
                     RIVAALVRRGFLRQEEPSGKYALSNIYYSFTSALSERNLLIPRAVPVMEKVFRTLRET
                     VHLNVVDGLERVCVHVLESPQPLKAVMPVGQRSPLYCGGSSKAILAFSDEETVERVFS
                     RPFRKFTGHTITGRKAMREEIRRIRDGGYAVSHGERVEGITSVSVPVFHPGGKLAGSL
                     TVSVPTARYTEPLMEKILRELSAASAGITRGMG"
     gene            1253..>1881
                     /locus_tag="VK429_07370"
     CDS             1253..>1881
                     /locus_tag="VK429_07370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014560637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLN91660.1"
                     /translation="MFKGIDYYDVESGLSSEARMIRDSVRDFVDKEFLPIVRDHYRAG
                     GFPMHIIPMLGEMGLLGSNLKGYGLPGIDQISYGLVMQELERGDSGLRSFASVQGALV
                     MYPIHTFGSEAQKERWLPPLGAGKAIGCFGLTEPDHGSDPGGMKTKAVKDGDHYVLSG
                     AKMWITNGSVADVAVVWAKLDGVVRGFLLEKGMKGFSAPEIHSKLSLRAS"
BASE COUNT          330 a          577 c          658 g          316 t
ORIGIN      
        1 gggggacccg gtcgccttcg gttccgccac cttctatatc ctgaacgtcc gctcgccggg
       61 ggactctccg ggtataatgg tggcgacgac gggccggtcg aagccgaagc cggtcctcaa
      121 aggggaaagt tgacatggtc aagcatccgc cgatcgggac cgacacgctg gtaggcgacg
      181 tcctccggaa ctatcccgcg cttcgggaaa aggtcgccga actcttcggc ccggagtgcg
      241 tctcgtgccg gtcgaaccgg cacgagacga tcatctacac ctcctggcac aaggggctcg
      301 acccggaggc ggtggtccgg gcgctgaacg acgcgctgaa agggaagtaa gcgttcaaac
      361 cccctggaat acccaccctg atcgaatcct cttgacgggc gatatcccgg agtgtataag
      421 gttccgatga ttatggaaca tagtgccaca tagtggaacg acctcccggg gcgaagctga
      481 tcgacaaggc cgtcgacgtc ctcttcctct gccgggacgc cgcggggccc gtcggcgtga
      541 cggaagccgc ccgccgcctc ggcatgccga agtcgagcgc cgcccggatc gtcgcagccc
      601 tcgtccggcg ggggttcctc cggcaggagg agccgtcggg gaagtacgcc ctatcgaaca
      661 tctactactc gttcacctcc gccctttccg agcggaacct cctgatcccg cgggcggtcc
      721 ccgtgatgga gaaggtcttc cggacactcc gggagacggt ccacctgaac gtcgtggacg
      781 gcctggagcg ggtctgcgta cacgtcctcg aatccccgca gccgctgaaa gcggtgatgc
      841 ccgtcgggca gcgctccccg ctgtattgcg gggggtcgtc caaggcgatc ctcgcattct
      901 ccgacgaaga gacggtggag cgggtctttt cccgtccctt ccggaagttc accggccaca
      961 cgatcacggg gaggaaggcg atgcgggagg agatccgccg gatccgggac ggcgggtacg
     1021 ccgtcagcca cggggaacgg gtcgagggga tcacctcggt cagcgtgccg gtgttccacc
     1081 ccggcgggaa actcgcgggc agtctcacgg tttccgttcc gacggcgcgg tacacggaac
     1141 cgttgatgga aaagatcctc cgggagctct cggccgcctc ggccggcatc acccgcggga
     1201 tgggataacg ccccccggcg acgcccgggg aaatcgacgc aaggagggaa ggatgttcaa
     1261 ggggatcgac tattacgatg tggaaagcgg cttgtcgtcc gaggcgcgga tgatccggga
     1321 ctcggtccgg gatttcgtgg acaaggaatt cctcccgatc gtccgggatc attaccgggc
     1381 gggcgggttc ccgatgcaca tcatcccgat gctgggggag atggggctcc tcggctccaa
     1441 cctgaaggga tacgggctgc cgggaatcga tcagatttcg tacggcctcg tcatgcagga
     1501 gctggagcgg ggtgactcgg ggctgcgcag cttcgcctcc gtgcaggggg cgctcgtgat
     1561 gtacccgatc cacacgttcg ggagcgaggc gcagaaggaa cggtggcttc cgccgctggg
     1621 ggctgggaaa gcgatcggct gcttcggcct gacggagccc gaccacggct cggacccggg
     1681 cgggatgaag acgaaggcgg tgaaggacgg ggatcattac gttctttccg gcgcgaagat
     1741 gtggatcacg aacggctccg tcgccgacgt ggcggtggtg tgggccaagc tcgacggcgt
     1801 ggtgcgcggg ttcctgttgg agaaggggat gaagggcttc tctgcgcccg agatccactc
     1861 gaagctctcg ctgcgggcct c
//
LOCUS       DATGYW010000529         1651 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_192546, whole genome shotgun sequence.
ACCESSION   DATGYW010000529 DATGYW010000000
VERSION     DATGYW010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192546"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VK429_07375"
     CDS             complement(<1..229)
                     /locus_tag="VK429_07375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLN91661.1"
                     /translation="MTGPDLLLIHPPAARAAEPPLGTAVLLSHLRREGATAEAIDSNL
                     EAHLYLLDGERLAGVAGPAPATALHRAVRNVP"
     gene            complement(244..372)
                     /locus_tag="VK429_07380"
     CDS             complement(244..372)
                     /locus_tag="VK429_07380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91662.1"
                     /translation="MSKWIVVCPECGEEFKVDVEEVPERCPRCKHEGNFEVVDVDD"
     gene            complement(409..726)
                     /locus_tag="VK429_07385"
     CDS             complement(409..726)
                     /locus_tag="VK429_07385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91663.1"
                     /translation="MPARILLSFLAAAFALALFVGPAVAEERTVVGTIVRLDPAEGVL
                     IVRDAAGASWTYKVEADAGIDLSVFRPGDRVKVSIGRATPLNMITAADLLRKGDRVEK
                     IPY"
     gene            complement(738..>1651)
                     /locus_tag="VK429_07390"
     CDS             complement(738..>1651)
                     /locus_tag="VK429_07390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009181633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HLN91664.1"
                     /translation="AGETVRILVESKAHEAKALRLLSRVGVDLSRVAFFRFPTDRGWT
                     RDFGPIFVRRERPKREGTVAGFGFNAWARYPDWRKDALVPARAAKALGLPFLPVRFHG
                     KRVVLEGGAIEVNGRGTLIAMEECLLDPEVQVRNPGMSREEMREVFRAFLGVTSVIWL
                     GKGIAGDDTHGHVDDLCRFTGPRTVVLCRERDPKDENHRVLEENRERLESSRLEDGSR
                     PEVVPLPMPAPLRFDGIRLPASYANFYVCNAAVLVPTFNDPNDRIALGILSGLFRDRP
                     VVGIHAVDLVWGFGTLHCLTQQQPASA"
BASE COUNT          254 a          603 c          550 g          244 t
ORIGIN      
        1 gggggacatt ccgcacggcg cggtgtagag cggtcgcggg cgcgggaccg gcgacgcccg
       61 ccagtcgttc cccgtccagc aggtaaaggt gcgcctcgag attggagtcg atcgcttccg
      121 ccgtcgcgcc ttcgcggcgc aggtgggaaa ggagcaccgc cgtccccagc ggcggttccg
      181 cggcccgggc ggcgggcggg tgaatcagca ggaggtccgg accggtcacg tcaccctgcg
      241 gcgtcagtcg tccacgtcga cgacctcgaa gttcccctcg tgcttgcagc ggggacaacg
      301 ctccgggacc tcctccacgt cgaccttgaa ctcctccccg cactcggggc acacgacgat
      361 ccatttgctc acgaagccgc ctcctttcag gtggcgcagc ccgaccggtc agtacgggat
      421 cttctcgacc cggtccccct tgcgcagcag gtccgccgcc gtgatcatgt tgagcggcgt
      481 cgcgcggccg atcgacacct tgacccggtc gcccgggcgg aagaccgaca ggtcgatccc
      541 ggcgtcggcc tcgaccttgt aggtccagga agctcccgcg gcgtcccgca cgatcaacac
      601 gccctccgcc gggtccagcc gtacgatcgt ccccacgacc gtccgttcct ccgcgacggc
      661 cggcccgacg aacagcgcca aggcgaaggc cgcggcgagg aaggacagga ggattctcgc
      721 gggcattctc catctcctca tgcggacgcc ggctgctgct gtgtcaggca gtggagcgtg
      781 ccgaaccccc acacgagatc cacggcgtgg atcccgacca ccggtcggtc ccggaacagc
      841 ccggagagga taccgagcgc gatccggtcg ttcggatcgt tgaaggtggg gacgagcacc
      901 gccgcgttgc agacgtagaa gttggcgtag ctggccggca gccggatccc gtcgaagcgc
      961 agcggcgcgg gcatcggcag cggcacgacc tcgggccggg aaccgtcttc cagcctggag
     1021 gattcgagcc gctcccggtt ctcttcgagg acgcgatgat tttcgtcctt cgggtccctc
     1081 tcccggcaca gaaccaccgt gcggggcccc gtgaagcggc acaggtcgtc cacgtggccg
     1141 tgcgtgtcgt ccccggcgat ccccttcccc agccagatca cgctcgtgac gccgaggaac
     1201 gcgcgaaaga cctccctcat ctcctcccgg gacatccccg ggttgcggac ctggacctcc
     1261 gggtcgagga ggcactcctc catcgcgatc agcgttcccc gcccgttgac ctcgatcgcg
     1321 cccccctcca ggacgacgcg ctttccgtgg aaccggaccg gcaggaacgg aagcccgagg
     1381 gccttcgcgg cccgcgccgg gacgagggcg tcctttcgcc agtccgggta tcgcgcccac
     1441 gcgttgaacc cgaacccggc gacggtccct tcccgcttcg ggcgctccct gcggacgaag
     1501 atcgggccga agtcgcgcgt ccacccgcga tcggtgggga aacggaagaa tgccacgcgg
     1561 gagagatcca ctccgacgcg ggagaggagc cggagcgctt tcgcctcgtg cgccttcgac
     1621 tccacgagga tccggacggt ctcgccggcg g
//
LOCUS       DATGYW010000530         2109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_86835, whole genome shotgun sequence.
ACCESSION   DATGYW010000530 DATGYW010000000
VERSION     DATGYW010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86835"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            214..855
                     /locus_tag="VK429_07395"
     CDS             214..855
                     /locus_tag="VK429_07395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015722885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6448 family protein"
                     /protein_id="HLN91665.1"
                     /translation="MARRSVIGIFAAAVIIVVLSMAGSALAHCDTLDGPVISQARQAL
                     EKGDVKIVLPWVAAEKEKEIREAFDLAVAVRGKGPKEKELADRYFFETLVRVHREGEG
                     APYTGLKPAGMDLGPAIPAADKALESGDPRPLLSLINGKVNEGIHKYYTEARERGAHA
                     KESVEAGRAYVQAYVPYLHFVERLYNDAVTPIAHGAADGGHAGPTVPPEPHAH"
     gene            997..1833
                     /locus_tag="VK429_07400"
     CDS             997..1833
                     /locus_tag="VK429_07400"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008336324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HLN91666.1"
                     /translation="MGKVTLITGATSGIGKATALLLAGKGYNVYAGARKTADGEALVA
                     EAKGRGIPLKAVQLDVTDDGSVRAAVSRVAKESGRLDNLVNNAGFGFLGTVEESTDAE
                     ILRQFDVNVFGVGRMCRAVLPLMRSRRSGVIINISAWLGRMGFPLLTYYNASKYAVEA
                     ITDSLRYEAGPFGIRVHSVMPGLFGTRFVSKGLVANPATVSPVSPYAALAAKLIPVVA
                     KKINEGPDPVVVAEAVLRVIEDAGSTIRTPVGVEAETFVPLAKQLDDEAFEAKVKEIF
                     GL"
     gene            complement(1865..>2109)
                     /locus_tag="VK429_07405"
     CDS             complement(1865..>2109)
                     /locus_tag="VK429_07405"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HLN91667.1"
                     /translation="VKRVIAGVLGSDARILKDPAPTVAVLGIEGGSVTFAVRPWVRTE
                     DYWDVYFNTNENMKKQFDAEGIRIPVPRRDVHLHQA"
BASE COUNT          400 a          608 c          749 g          352 t
ORIGIN      
        1 aaagtgtcat cccgcgatct ccgctggtcg ttaccgcgcc cacggcaagg gaacggcaac
       61 gggaaacaat cactatggat gcgttatatc aaaaacgcat aacgttccgc aacgatgttg
      121 atttgagtca aggcggaggg gagggacgtg gaggacactg gacccgggac accccatggg
      181 ccgatggccc gtaaccgggg gagggaggga aaaatggcaa ggagaagcgt catcggcatt
      241 tttgcggcgg cggtcatcat cgtggtgctt tcgatggcgg ggagcgccct ggcccattgc
      301 gacaccctgg acggcccggt gatctcgcag gcccggcagg cgctggaaaa gggggatgtg
      361 aagatcgtcc tgccgtgggt ggcggcggag aaggagaagg agatccggga ggccttcgat
      421 ctggcggttg ccgtgcgcgg gaaggggccg aaggagaaag aacttgcgga ccggtatttc
      481 tttgagaccc tggtacgggt ccaccgggag ggggagggag ccccctacac gggcctgaaa
      541 cctgcgggga tggacctggg ccccgccata ccggcggcgg acaaggcgct ggagtccggc
      601 gatccccgcc cgctcctttc cctcatcaac gggaaggtca acgaagggat ccacaaatat
      661 tacaccgagg ccagggaacg gggagcccac gcgaaggaga gcgtggaggc gggccgcgcg
      721 tacgtgcagg cgtacgtccc gtacctccac ttcgtggagc ggctctacaa cgacgccgtc
      781 acaccgatcg cccacggcgc cgccgacggg ggacacgcgg ggccaacggt tcccccggag
      841 cctcacgcgc attaagacga tgactggagg gtcgaagcga tctctccagg aggggagcag
      901 ggatcccgca cggtccatcg ccgggcaatt gatgtccgtc aatgaatcct cgaaggtttc
      961 agtggatgat gatcgaaaat cgggggaggt gtccgcatgg gcaaggtcac gctgatcacc
     1021 ggggcgacat ccgggatagg gaaggcaacg gctctcttgc ttgcgggcaa gggatacaat
     1081 gtttacgcgg gggcgcggaa aacggcggat ggggaggcgt tggtcgcaga ggcgaagggc
     1141 cgtgggatcc ccctcaaggc cgtgcagctg gacgtcacgg acgacggttc cgtccgcgcc
     1201 gccgtttcgc gcgtggcgaa ggagtccgga aggctggaca acctcgtcaa caacgcgggg
     1261 ttcgggttcc tggggacggt ggaggagtcg acggacgcgg agatcctgcg ccagttcgac
     1321 gtcaacgtct tcggtgtggg ccggatgtgc cgggcggtac tccccctgat gcggtcccgg
     1381 cggtcgggcg tgatcatcaa catctccgcg tggctcggga ggatgggatt tccgctgttg
     1441 acgtactaca acgcgagcaa gtacgccgtc gaggcgatca cggattccct gcggtacgag
     1501 gctgggccct tcgggatccg ggttcactcg gtgatgccgg gcctcttcgg gacgcgtttc
     1561 gtgtcgaagg ggttggtggc gaacccggcg accgtctctc cggtgtcgcc gtacgccgcg
     1621 ctggcggcga aactcatacc cgtggtggcg aagaagatca atgaggggcc ggaccccgtt
     1681 gtcgttgccg aggcggtcct ccgcgtgatc gaggatgccg gttccaccat ccgcactccg
     1741 gtaggggtgg aggcggagac gttcgtccca ctggcgaagc agctcgatga cgaggcgttc
     1801 gaagcgaagg tgaaggagat cttcgggctg taaggcatcg ccacaaaccg tccgggaccg
     1861 tcacttaagc ctggtgcaag tgaacatccc gccggggcac cgggatccgg atcccctctg
     1921 cgtcgaactg cttcttcatg ttctcgttcg tgttgaaata gacatcccaa tagtcctccg
     1981 tcctgaccca cggccggacg gcgaaggtga cacttccgcc ctcgatcccc aggacggcga
     2041 cggtcggcgc gggatctttg aggatacggg cgtcgctccc cagcaccccg gcgattacgc
     2101 gcttcacct
//
LOCUS       DATGYW010000531         1875 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_421192, whole genome shotgun sequence.
ACCESSION   DATGYW010000531 DATGYW010000000
VERSION     DATGYW010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421192"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            138..893
                     /gene="atpB"
                     /locus_tag="VK429_07410"
     CDS             138..893
                     /gene="atpB"
                     /locus_tag="VK429_07410"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012347.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HLN91668.1"
                     /translation="MRKGILGLLAVAALPTTALAAGGHGFSWFMMLPGGENLYYMYAA
                     LFIAVSLLVASAVVVGGRKTEEMVIPDPRFTLRNFFELILGFLAQLAEDIIGRHYKKY
                     LPLLGSCFLFILFMNLIGLIPGFLPPTQKMNITVGLALIIFLSTHYFGVRENGIAYFK
                     HFLGPMWWMFPIMLPIEIISHLARPMSLSLRLFGNITGDHAVVAGFMALIPIVVPSVF
                     MGLGVFVSFMQAFIFTVLSMIYISGAVTHAEEH"
     gene            996..1328
                     /locus_tag="VK429_07415"
     CDS             996..1328
                     /locus_tag="VK429_07415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006419626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HLN91669.1"
                     /translation="MFRRFTFSFLVALLFVAVASVAMAAEGTPAAGGDSNVKAVIALA
                     AGFGIAIAAFGGAMGQGKAIAAGLEGIARNPSAQNKIFIPMIVGLALIESLVIYALVI
                     AFVLVGKL"
     gene            1443..>1875
                     /locus_tag="VK429_07420"
     CDS             1443..>1875
                     /locus_tag="VK429_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017327590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-transporting P-type ATPase"
                     /protein_id="HLN91670.1"
                     /translation="MGDWHRREIADVVRELGTDPGAGLTGAEAASRLRASGPNELPEG
                     PPVRPGRIFLSQFASTMVAVLLAAAVVSALLGDLVDTVAIAAIVLLNALLGFIQEYRA
                     EKAMAALSRLAAPVVKVRRDGEIREIPARELVPGDVLLLETG"
BASE COUNT          277 a          629 c          595 g          374 t
ORIGIN      
        1 gtccggtacg gcgggttcaa cctgctgggg tttctgctcg ggctctcctc gctcttcctc
       61 ggagtccttc tcgaggcgct ggcgaggtcg ttcgaaccaa acgcgtgatc gtttcgcgat
      121 cgacgggggt agggacgatg cggaaaggaa tcctggggct tctggccgtc gcggcgctgc
      181 cgacgacggc cctggcggcg ggagggcacg ggttctcctg gttcatgatg ctgcccggag
      241 gggagaacct ctactacatg tacgcggccc tcttcatcgc cgtgtccctg ctcgtcgcgt
      301 cggccgtggt cgtcggtggc aggaaaacgg aagagatggt gatcccggat ccccggttca
      361 cgctgcgcaa cttcttcgag ctgatcctcg ggttcctggc ccaactcgcc gaggacatca
      421 tcgggcgcca ctacaagaag tacctcccgc tgctggggag ctgcttcctc ttcatcctgt
      481 tcatgaacct catcgggctc atccccgggt tcctcccccc gacgcaaaag atgaacatca
      541 ccgtggggct ggcgctgatc atcttcctgt cgacccacta tttcggggtc cgggagaacg
      601 ggatcgccta cttcaagcat ttcctcggcc ccatgtggtg gatgtttccg atcatgctgc
      661 cgatcgagat catctcccac ctggcgcggc cgatgtcgct ctccctgcgt ctcttcggga
      721 acatcacggg cgaccacgcg gtggtggccg ggttcatggc gctcatcccc atcgtcgtcc
      781 cttcggtctt catgggcctc ggcgtcttcg tttcgttcat gcaggcgttc atcttcaccg
      841 tgctctcgat gatctacatc tcgggggccg tgacgcacgc ggaggagcat tgatccgggg
      901 gaagctcccc ggtcgatgat acgggtcgga aaggctccac cccggcggcc gggcggaacc
      961 ggccaccggg aacatcctga aagggggaac acccaatgtt ccgcaggttc actttctctt
     1021 tcctcgtcgc tctgctcttc gtggcagtgg cgtcggtggc tatggcggcg gaaggcacac
     1081 ccgccgcggg cggcgactcc aacgtgaagg ccgtcatcgc tctggcggca gggttcggca
     1141 tcgcgatcgc ggcattcggc ggcgcgatgg gccagggcaa agccatcgca gccgggctgg
     1201 aggggatcgc gcgcaaccct tccgcccaga acaagatctt catcccgatg atcgtcggcc
     1261 tcgcgctgat cgagtccctc gtcatctacg cgctggtcat cgcgttcgtg ctcgtcggga
     1321 agctctaagc cggcgcacgg cgaaaccgat ccgcgaaaag ggctccttcg ggagcccttt
     1381 tccgttactt cgcatagttt gcttccgggc tcgcccttcg caaacggtac aatacacgca
     1441 ccatgggcga ctggcatcgc agggagatcg cggacgtcgt ccgggagctt ggtaccgatc
     1501 ccggggccgg gctgaccggc gccgaggccg cgtcccgtct tcgcgcgagc ggccccaacg
     1561 aacttcccga aggccccccc gttcgccccg gacggatctt tctctcccag ttcgcctcca
     1621 cgatggtcgc ggtcctcctt gcggcggccg tcgtctccgc gctgctgggc gacctcgtgg
     1681 acaccgtcgc gatcgccgcc atcgtcctcc tgaacgcgct gctcggcttc atccaggagt
     1741 accgagccga aaaggcgatg gcggcgctgt cgcgcctcgc cgcccccgtg gtgaaagtgc
     1801 gcagggacgg ggagatccgg gagatccccg cccgggagct cgttcccggc gacgttctcc
     1861 tgctggaaac ggggg
//
LOCUS       DATGYW010000532         1609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_86895, whole genome shotgun sequence.
ACCESSION   DATGYW010000532 DATGYW010000000
VERSION     DATGYW010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86895"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..704)
                     /locus_tag="VK429_07425"
     CDS             complement(<1..704)
                     /locus_tag="VK429_07425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015773415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HLN91671.1"
                     /translation="MPYTTGMDPKGPIPVSLFFTCLADAFSPGVCSATVEVLERFGAT
                     VRVPLSQTCCGQPAFNSGNRKEARAMARKFLLSFPDEGPIVTPSGSCAAMVKHGYPVL
                     FRDEPRMLARARAVGERIYELSQFLVDVLGVTDPKSDFSGKVTYHDSCHLRRGLGVVE
                     APRKLLRAIPGVEFVEMEESDRCCGFGGVFSLKYPQVSCKMTERKVERILATGASYVT
                     SGDLGCLLNIGGLISRV"
     gene            complement(737..1075)
                     /locus_tag="VK429_07430"
     CDS             complement(737..1075)
                     /locus_tag="VK429_07430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013574351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HLN91672.1"
                     /translation="MKKIEAIIKPFKLDEVKKALYEAGVTGMTVLEVKGFGRQKGHTE
                     VYRGAEYVVDFIPKVKIETAVNDELVPAVVERILTAAGTGKIGDGKIFVFDLEEVVRI
                     RTGERGKEAL"
     gene            complement(1125..>1609)
                     /locus_tag="VK429_07435"
     CDS             complement(1125..>1609)
                     /locus_tag="VK429_07435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015744235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ammonia channel protein"
                     /protein_id="HLN91673.1"
                     /translation="FVGWLHRGKPTVLGAASGCVAGLVAITPASGFVAPLAALVIGAA
                     AGAVCYSAIMLKGRLGYDDSLDVVGVHCVGGTLGALATGLFATVAVNPAGANGLFYGN
                     PKLFAIQALAAGISLVYSFVVSLILLKVLDKTMGLRVEEEEERMGLDLSEHGEAGYNW
                     "
BASE COUNT          274 a          561 c          503 g          271 t
ORIGIN      
        1 acccgcgaga tcagcccacc gatgttcagc aggcacccga ggtccccgga agtgacgtac
       61 gatgcgccgg tggcgaggat ccgctccacc ttgcgctccg tcatcttgca ggagacctgc
      121 ggatatttaa gggagaagac gccaccgaat ccgcagcacc ggtcgctctc ctccatctcg
      181 acgaactcga cgccgggaat ggcgcgtagc agcttccgcg gggcctcgac caccccgagc
      241 ccccgccgta ggtggcacga gtcgtgatac gtcacttttc cggaaaaatc cgatttcggg
      301 tcggtcaccc cgagcacgtc gacaaggaac tgggagagct cgtatatgcg ttcgccgacg
      361 gcccgggcgc gggcaagcat gcggggctcg tcccgaaaca ggacggggta gccgtgcttc
      421 accatcgccg cgcacgaccc cgatggggtg acgatggggc cctcgtcggg aaaggagagg
      481 aggaacttcc gcgccatcgc gcgggcctcc ttccggtttc ccgagttgaa ggcgggctgg
      541 ccgcagcacg tctgggagag ggggacgcgc accgtcgccc cgaaccgttc cagcacctcg
      601 acggtcgcgc tgcagacccc gggggagaag gcgtcggcga ggcaggtgaa gaaaagggaa
      661 acggggatgg gccccttcgg atccatcccc gtagtatacg gcattcgcgt ccccctcgat
      721 ggggggatac aaacggttac agcgcttcct tcccccgttc tccggtccgg atgcggacga
      781 cctcctcgag gtcgaagacg aagatcttcc cgtcgccgat ctttcccgtg cccgcggcgg
      841 tcagaatccg ttcgaccacc gcgggcacga gctcgtcgtt cactgccgtc tcgatcttga
      901 ccttggggat gaagtcgacc acgtattccg ccccgcggta cacctcggtg tgccctttct
      961 gccgtccgaa ccccttcacc tcgaggacgg tcatcccggt cacgcccgcc tcgtagagcg
     1021 ccttcttcac ctcgtccagc ttgaacggct tgatgatcgc ttcgatcttc ttcatcgggc
     1081 ctctcctttt tccgtataac tttccgcccc catgggcgcg gggcttacca gttgtatccc
     1141 gcctccccgt gctccgagag gtccagtccc atccgctctt cctcctcctc gaccctcagg
     1201 cccatcgtct tgtcgaggac cttgaggagg atcaggctca cgacgaagga gtagacgagg
     1261 gagatcccgg cggcgagcgc ctggatcgcg aagagtttcg ggttgccgta gaagaggccg
     1321 ttcgcgccgg ccgggttcac cgcgaccgtc gcgaagagcc ccgtggccag ggcgcccagg
     1381 gtcccgccga cgcaatggac gccgacgacg tcgagcgagt cgtcgtatcc gagccgcccc
     1441 ttgagcatga tggcgctgta gcagaccgcg cctgccgccg caccgatcac cagggccgcc
     1501 agaggcgcca cgaagcccga cgcgggagtg atggcgacca gccccgctac gcatcccgac
     1561 gccgctccga ggaccgtcgg cttcccgcgg tggagccacc ccacgaagg
//
LOCUS       DATGYW010000533         2117 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_192749, whole genome shotgun sequence.
ACCESSION   DATGYW010000533 DATGYW010000000
VERSION     DATGYW010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192749"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..1021)
                     /gene="secF"
                     /locus_tag="VK429_07440"
     CDS             complement(104..1021)
                     /gene="secF"
                     /locus_tag="VK429_07440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HLN91674.1"
                     /translation="MIELVKNTKIDFMGLRRYAFAFSMILVLLGFVGTAQIYRGKAVL
                     GIDLAGGTEIQLKFQKPFSMDEIRSLLAKAGHGEATLQEVSGENILMLKLGAGGKLEE
                     KMVAEPVLNLLRQSLPGNPFVVESVSEIGPAIGHKLRRDAELAMLISALAIIIYLAWR
                     FEFKFGVAAAIATFHDIFAIVGIFWILGIEMDLLFITALLTIGGYSLTDTVVVFDRIR
                     ENIRLRKKGTFSETINLSVNEVLSRTIVTSLTVFIAVVTLLIFGGIVLHNFALALAIG
                     IVIGTYSSIFVASPVVAVWRGEKMTEVKR"
     gene            complement(1044..>2117)
                     /gene="secD"
                     /locus_tag="VK429_07445"
     CDS             complement(1044..>2117)
                     /gene="secD"
                     /locus_tag="VK429_07445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012814311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HLN91675.1"
                     /translation="AEGEDRIVVQLPGIKDQQRAIELVGKTALLEFKLVDEGTSLEEA
                     LKGNVPEDAQVLYQKSVDPQSGRATKTPMVVKKRALLTGDTIKTAKVNFGNQAGGAHV
                     SLSFDTRGAKVFDRVTAENVKRRLAIVLDDTIYSAPVIQERISGGEAQITGSFTPEEA
                     SDLAIVLRAGSLPAPVKVIQNVSIGPSLGLDSIKKGVRAALIGALLVVAFMAFYYRFA
                     GMVADFALVFNILFLLSGMAAFSATLTLPGIAGIILAIGMAVDSNVLIFERIREEIRA
                     KKSVRAAIDAGYDKAFWTVVDSHVTTLITAVILFQFGTGPIKGFAVTLSMGVAINLFT
                     ALVCTKVVFDYLNAKKPMQALSI"
BASE COUNT          411 a          672 c          649 g          385 t
ORIGIN      
        1 aggggacaat ccatggcggg tcgacagttc ccggacggca gcctgatcgg gggagaggag
       61 gttccactcc cgcttcatcg cccccttcaa gccgccgccc cggtcacctc ttcacttcgg
      121 tcatcttctc gccgcgccag acggcaacga ccgggctggc cacgaagatc gaggagtagg
      181 taccgataac gatcccgatc gcgagggcca gcgcaaagtt gtgcaggacg atcccgccga
      241 agatcagcaa cgtaacgacg gcgatgaaga cggtcagcga agtaacgatg gtccggctga
      301 ggacctcgtt gacgctcaga ttgatcgttt cggagaaggt ccccttcttc cggagccgga
      361 tgttctcccg gatccggtcg aatacgacga ccgtgtcggt cagcgaatac cccccgatgg
      421 taagcagcgc ggtgatgaag aggaggtcca tctcaatgcc gaggatccag aagatgccga
      481 cgatggcgaa gatgtcgtgg aatgtggcga tcgccgccgc gaccccgaac ttgaattcga
      541 accgccaggc aagatagatg atgatcgcca gcgcggaaat cagcatcgcc agctcggcgt
      601 cccggcgcag cttgtggccg atggccggcc cgatctcgga aacgctttcc acgacgaacg
      661 ggttccccgg gagagattgt cgcaggaggt tcaacaccgg ctcggcgacc atcttctctt
      721 ccagcttgcc gccggcgccc aatttgagca tgaggatgtt ctctcccgaa acctcctgca
      781 aggtcgcctc gccgtggccc gccttggcca gcaatgaccg gatctcatcc atcgaaaagg
      841 gtttctggaa cttgagctgg atctccgtcc cgcctgcgag atcgataccc agaacggcct
      901 ttccccggta aatctgggca gtcccgacga aaccgaggag aaccaggatc atggaaaaag
      961 cgaaggcata tcttctcaga cccatgaagt cgatcttggt gttttttacc agttcgatca
     1021 tcgtcagtcg tccccgtatt cctttaaatg ctcagcgcct gcatcggctt cttggcgttg
     1081 aggtagtcga acacgacctt ggtgcacacg agcgcggtga agaggttgat cgccacgccc
     1141 atggagagcg tcacggcaaa ccccttgatc ggcccggtgc cgaactggaa gaggatcacc
     1201 gccgtgatca gcgtggtcac gtgggaatcg accacggtcc agaacgcctt gtcgtacccg
     1261 gcgtcgatcg ccgcccgaac ggacttcttc gcgcggatct cctcgcggat gcgctcgaag
     1321 atcaggacgt tcgagtcgac tgccatcccg atcgccagga tgatcccggc gatgccgggg
     1381 agggtgaggg tcgccgagaa ggcggccatc cccgacagga ggaagaggat gttgaagacg
     1441 agggcgaagt ccgccaccat ccctgcgaac cggtagtaga acgccatgaa cgcaacgacg
     1501 agcagggcgc cgatcagcgc cgcccgaaca ccctttttaa tcgagtcgag accaagggac
     1561 ggaccgatgg agacgttctg gatcaccttg accggcgccg gcagcgaccc ggcccgaagg
     1621 acgatcgcga ggtcggatgc ctcctccggg gtgaagctcc cggtgatctg cgcctcgccg
     1681 cccgagatcc gctcctggat gaccggtgcg gagtagatcg tgtcgtcgag gacgatcgcc
     1741 aggcgacgct tgacgttctc ggcggtcacc cggtcgaaga ccttcgcccc ccgcgtgtcg
     1801 aaggagaggg agacgtgcgc gcccccggcc tggttgccga agttcacctt cgccgtcttg
     1861 atcgtgtcgc cggtgagcag cgcccgcttc ttcacgacca tcggcgtctt cgtcgcacgg
     1921 ccgctctgcg ggtccaccga tttctggtag agcacctggg catcctcggg gacgttcccc
     1981 ttcagggcct cttccaggct cgtcccctcg tcgaccagct tgaactcgag cagggctgtc
     2041 ttgccgacga gctcgattgc gcgctgctgg tccttgattc ccggaagctg caccacgatc
     2101 cggtcctcgc cctcggc
//
LOCUS       DATGYW010000534         1781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_317281, whole genome shotgun sequence.
ACCESSION   DATGYW010000534 DATGYW010000000
VERSION     DATGYW010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317281"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..475)
                     /locus_tag="VK429_07450"
     CDS             complement(86..475)
                     /locus_tag="VK429_07450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91676.1"
                     /translation="MMNRNPRIQEILSGIILLAARRKGPVPVSQIHSILHAMKAHESI
                     LSGLRFSLTGAVCYSREIDHAIGRLTDDGFLKLVDGSVLIGENAHEFGEYLSGFLTNS
                     QIEAVHSVSIRFHNRLRRDAREHRAHP"
     gene            complement(571..795)
                     /locus_tag="VK429_07455"
     CDS             complement(571..795)
                     /locus_tag="VK429_07455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017316885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HLN91677.1"
                     /translation="MATHSYTVLVEKENGGYRAHCPALPGCRSFGDTKKEAVDNIKLS
                     ISYRLETLMAKGEPIPKDGDLAHSVPQHAS"
     gene            complement(1077..>1781)
                     /locus_tag="VK429_07460"
     CDS             complement(1077..>1781)
                     /locus_tag="VK429_07460"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HLN91678.1"
                     /translation="KKGMVEQAEGGTLFLDEIGDLSPEAQAKLLRFLEEGEYYRVGGT
                     RKLTVHARVVSATNKNLQERIRKGLFREDLYYRLAVAQVELPSLTQRRDDIVPIALHF
                     LLEFNRKFGRSFAGISRDAREALMRHPWKGNVRELRNLVERGVLVGKEPELIPEDLGL
                     GVPDLSPESPPAGGEILHPFLPPEGVDLGVAHESVDRHYFREALRMAGGNETRAAQLL
                     RINYSTFRYRRRKLGL"
BASE COUNT          348 a          564 c          504 g          365 t
ORIGIN      
        1 cctcgacgag gaggatgctc tccacgccca tttcattgta gggattcctc atggcgtcaa
       61 cgctcccgca cgtcgcgatg ccggatcatg gatgggcgcg gtgctccctg gcgtctcttc
      121 gcaaccggtt gtgaaaacgg atcgaaacgg agtggacggc ttcgatctgg gaattcgtga
      181 gaaacccgga tagatattcc ccgaactcgt gcgcgttctc ccctatgagc accgacccat
      241 cgacgagctt aaggaacccg tcgtcggtca gccgaccgat cgcatggtcg atctcgcgcg
      301 aatagcacac ggccccggtc aaggagaagc ggagccctga caggatcgat tcgtgggctt
      361 tcatcgcgtg gaggatcgaa tggatttgcg acacggggac cggccccttg cgtcgtgccg
      421 ccagcaggat gatccccgac aggatctcct ggatccgcgg gttcctattc atcatcgctc
      481 caccggcccc ctgtggagat atcggggaga gatactccgc cccgggaatc ccggttctcc
      541 cgccggtcaa ggcatcaccc cattttgcgt ttacgatgcg tgctgcggca cggagtgcgc
      601 cagatctcca tccttcggta tcggttcccc ttttgccatc aatgtttcca gccgatagga
      661 aatggaaagc ttgatgttat ccaccgcctc ctttttggtg tccccaaagg agcggcaccc
      721 gggcagtgca gggcaatgtg cgcggtatcc cccgttttcc ttctccacca gcacggtgta
      781 actatgcgtc gccatctccc cctccttttt cccccgctcc tgcccaaaga tttcaagggc
      841 acgcttcgcg gggcaacttg cataatcgtt ggaacgcccg cctgaccgga accatcaaga
      901 tatttgccag aagttacacg cagaaagcgt gccagtaggg ggaagtatcg gaagtcagcc
      961 agatcagagc cttacgagat cacttcctgg aaagggggag gggggaaccg cccgaactct
     1021 ggaaaatgtt gcagatcgga ctcatcatcc ggaaatattt acagtagcgc acggcatcaa
     1081 agccccaatt ttctccttcg gtagcggaac gtggaatagt tgatccggag aagctgcgcc
     1141 gcccgggttt cgtttccccc ggccatccga agggcttccc ggaaataatg ccggtccacc
     1201 gattcgtgcg ccacgccgag atcgacccct tcgggaggaa gaaacgggtg aaggatctca
     1261 ccgccggcgg gcggggattc cggagagaga tccggtactc ccaagccgag gtcctccggt
     1321 atcagctcgg gctccttccc cacgagtact ccccgttcca caaggttcct caactcccgg
     1381 acgttgcctt tccaggggtg ccgcatcagg gcctcccgcg catccctgga gatgccggcg
     1441 aaggacctgc cgaacttcct gttgaattcc aggagaaagt gcaaggcgat cgggacgatg
     1501 tcgtcccgcc gctgcgtgag ggaagggagc tcaacctggg cgacggccag gcgataatag
     1561 aggtcctccc ggaaaagccc tttcctgatc cgctcctgga ggtttttgtt cgtggcggac
     1621 acgacccgtg catggaccgt gagcttcctc gttcccccca cccggtaata ctccccctcc
     1681 tcgaggaaac ggagcagctt ggcctgcgcc tcggggctca gatcgccgat ctcatcgagg
     1741 aacagggtcc ctccttccgc ctgttccacc atcccctttt t
//
LOCUS       DATGYW010000535         1633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_87002, whole genome shotgun sequence.
ACCESSION   DATGYW010000535 DATGYW010000000
VERSION     DATGYW010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1633)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1633
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87002"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..709)
                     /locus_tag="VK429_07465"
     CDS             complement(<1..709)
                     /locus_tag="VK429_07465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012545035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HLN91679.1"
                     /translation="MDAGTVYLIAGAVTFAFTTVLTVAGVGAAFILIPVFLSLGIGLH
                     TAMATALLLNALAMFFACLRFVPAGMVDFRAAVPILIVATVLSPLGAWSSAYLPIPLL
                     KGLFVGFLLFAASMMLFYQARPHETGISRGKAAGYGAAVGGIAGYVGGLLGVGGGNII
                     VPALIGLGFDPKKASATTAFIVIFSSLTGFLGKASIGGMDGRLLAWTAAGSIAGSLLG
                     AWLMQKKLAAGQVKKTIG"
     gene            complement(718..1320)
                     /locus_tag="VK429_07470"
     CDS             complement(718..1320)
                     /locus_tag="VK429_07470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009614937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdE family protein"
                     /protein_id="HLN91680.1"
                     /translation="MLDAELLTLGLKFHGHKCPAMPMGLRAGVAAMRALGVERAQDKE
                     LYAISETGEGHAAGCFLDGVMTSTGCTFGKGNIEKVRYHKMAFTLVDVRSQKAVRVSL
                     KPAFFAAALDGPFVAQRKAGVLPQDIDPRITDPLVEKIAGLPEEQFLAVGPVVEYPFP
                     ARKGIFEAKPCAKCGEIVFADKLRVQGGEEVCIPCSGYER"
     gene            complement(1420..>1633)
                     /locus_tag="VK429_07475"
     CDS             complement(1420..>1633)
                     /locus_tag="VK429_07475"
                     /inference="COORDINATES: protein motif:HMM:NF024934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLN91681.1"
                     /translation="LQEGDRGTAAIVSLPVPSGEFARALGIAPESFSRAVTDLAEAGV
                     IHRLGRGRFQVLDPQSLRNASSPAGL"
BASE COUNT          313 a          559 c          510 g          251 t
ORIGIN      
        1 tgccgatcgt cttcttcacc tggccggcgg caagtttctt ctgcatcagc caggccccaa
       61 ggagggatcc cgcgatggat ccggcggccg tccaggccag cagacgacca tccatgcccc
      121 cgatggacgc cttccccaga aaaccggtca gcgacgagaa gatcacgatg aacgcggtag
      181 tggcggacgc tttcttggga tcgaacccga gtcctatcaa cgccggaacg atgatattgc
      241 cgcctccgac cccgaggagg cctccgacat agcccgcgat cccaccgacg gccgcgccgt
      301 accccgcggc cttcccccgg gagatccccg tctcatgagg ccgcgcctgg tagaagagca
      361 tcatcgaggc cgcaaagagc agaaagccga cgaagaggcc cttcaggaga gggatgggca
      421 ggtaggcgct ggaccaggcc cccaacgggg acaggaccgt ggcgacgatc agtatgggca
      481 ccgcggcgcg gaagtcgacc atacccgccg gaacgaaccg caggcaggcg aagaacatgg
      541 ccagggcgtt caggagcagg gcggtcgcca tggcggtgtg cagaccgatc cccagggaga
      601 ggaagaccgg gatcaatatg aacgccgccc cgacccctgc gaccgtcagg acggtcgtga
      661 atgcgaacgt gaccgccccg gcgatcaggt ataccgtgcc cgcatccatg gcaatcgcta
      721 ccgctcatac cccgagcagg ggatgcacac ttcctcgccg ccctgaaccc ggagcttgtc
      781 cgcgaacacg atctccccgc atttcgcgca cggcttcgct tcgaagatcc ccttcctcgc
      841 cgggaacgga tactccacga cggggccgac cgcaagaaac tgctcctccg gaagccccgc
      901 gatcttctcc acgagggggt ccgtgatccg cgggtcgatg tcctggggaa gaactcccgc
      961 cttgcgttgg gcgacgaacg ggccatcgag ggcggccgcg aaaaacgccg gcttcaggga
     1021 cacgcgtacg gccttctgac ttcgaacgtc gaccagggtg aaggccatct tgtgataccg
     1081 cactttctcg atgttcccct tcccgaacgt gcaccccgtg gaggtcatga ccccgtccag
     1141 gaagcagccc gccgcgtgcc cttccccggt ctcgctgatt gcatacagtt ccttgtcctg
     1201 ggcccgctcg acccccaggg cccgcatggc ggccaccccc gcccgcaatc ccatcggcat
     1261 ggccgggcac ttgtgcccgt gaaacttgag tcccaacgtc agtagctccg cgtcaagcat
     1321 gacggcctcc ttcgcgattt attctgatgt caggatatgt attccggccc ggcggtgcat
     1381 tgatcggacg caataaccgg tcgattttcg gggaagaaat tacaggccgg cgggggagga
     1441 tgcgttccgc aaagattgcg ggtcgagaac ctggaaccgg ccccgcccca ggcggtggat
     1501 cacgcccgct tccgcaaggt ccgtgacggc gcgggagaag ctctccgggg cgatcccgag
     1561 ggcccgggcg aactccccgg aagggaccgg gagggatacg atcgccgcgg ttccgcggtc
     1621 gccctcctgc agc
//
LOCUS       DATGYW010000536         1805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_317339, whole genome shotgun sequence.
ACCESSION   DATGYW010000536 DATGYW010000000
VERSION     DATGYW010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317339"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..583)
                     /locus_tag="VK429_07480"
     CDS             complement(<1..583)
                     /locus_tag="VK429_07480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012530618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN91682.1"
                     /translation="MLRIKNLESGYGRLKVLKKVTMHIGAGEIVTIIGANGAGKTTLL
                     RTVSGLLPARSGEILFDMKEIGTLSPEKIVFLGCSLVPEGRQVFAPMTVKENILLGGY
                     PQYRGKRGDQVRNDLERVYGIFPRLRERDRQFAGTLSGGEQQMLAIARALMARPRLIM
                     MDEPSMGLAPLVIKDIFSVVKRLRAEASTVLLVE"
     gene            complement(577..1341)
                     /locus_tag="VK429_07485"
     CDS             complement(577..1341)
                     /locus_tag="VK429_07485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013162346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN91683.1"
                     /translation="MTLLSVRGIGKRFGGLQAVNDLSFDVAAGSIKALIGPNGAGKTT
                     IFNLISGFLPPDSGEIVFGGAEIQALSSAQVAVRGMVRTFQHIRLFPKMTVLENIMVG
                     RHVHSRAGFLAGMLNLPSTWGEERRIREKSFEIMEMLGIAAHAGTEAISLAYGQQRVV
                     EIGRALACEPKLLLLDEPAAGLNMRETIEMGGLISRIREMGVTVLLVEHDMSLVMKIS
                     DEVVVVSYGEKIAEDRPLAIQKNREVIRVYLGDDEC"
     gene            complement(1338..>1805)
                     /locus_tag="VK429_07490"
     CDS             complement(1338..>1805)
                     /locus_tag="VK429_07490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015402377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN91684.1"
                     /translation="ILGMVLLLNLIRSRVGRALAAVHGAEDAAEAMGIPTARYKLHTF
                     VLSAVFAALAGVLLTHYNGGIGPSEAGVMKSVRYVAIVAIGGMANLWGALSMSLVLNY
                     LSLRGYFGTYDDAVFGAILILIMMFAPDGLLRRHLLSDLRRMVSRNPAEEEAP"
BASE COUNT          312 a          630 c          555 g          308 t
ORIGIN      
        1 gctcgacgag cagaaccgtg ctggcttccg cccgaagcct cttgacgacc gagaagatgt
       61 ccttgatgac cagcggcgca agccccatcg agggctcgtc catcatgatc agccttgggc
      121 gggccatgag cgccctcgcg atggcgagca tctgctgttc gcccccggag agcgtccctg
      181 cgaactgccg atcccgctcc ctgagccgtg ggaagatccc gtagacgcgc tcgaggtcgt
      241 tccgcacctg atcgccccgc tttccgcgat attgcgggta gccgcccagg aggatgttct
      301 ccttcaccgt catgggagcg aagacctgcc gtccctcggg gacgagcgag cagccgagga
      361 agacgatctt ttccggggac aacgtcccga tctccttcat gtcgaagaga atctcgcccg
      421 accgtgccgg gaggagcccc gagaccgtcc tcaggagggt cgtcttcccg gcgccgttcg
      481 ccccgatgat cgtgacgatc tccccggccc cgatgtgcat cgtgaccttc ttgagcacct
      541 tcagcctgcc gtacccggac tcgaggttct tgatcctcag cactcgtcgt cccccagata
      601 cacccggatc acctcccggt tcttctggat cgcgagggga cggtcctcgg cgatcttctc
      661 cccgtagctc accacgacga cctcgtccga gatcttcatg acgagcgaca tgtcgtgctc
      721 cacgagcagc accgtgacgc ccatctcccg gatcctcgag atcaaccctc ccatctcgat
      781 cgtttcccgc atgttcagcc cggccgccgg ttcatccagc aggaggagct tcggctcgca
      841 ggcgagcgcc cggccgatct cgacgacgcg ctgctgtccg taggcgaggc tgatcgcctc
      901 ggtcccggcg tgggcggcga ttcccaacat ctccatgatc tcgaagctct tctcccggat
      961 ccgccgctcc tcgccccacg tggacggcag gttcagcatc ccggcgagga accccgcccg
     1021 gctgtggacg tggcgtccga ccatgatgtt ctcgaggacc gtcatcttcg ggaagaggcg
     1081 gatatgctgg aacgtccgca ccatgccgcg gacggcgacc tgggcggacg acagggcctg
     1141 gatctccgcc cccccgaaaa cgatctcgcc ggagtcgggg ggaaggaacc cggagatcag
     1201 gttgaagatc gtcgtcttcc ccgcgccgtt cggtccgatc agcgccttga tcgatcccgc
     1261 cgcgacatcg aaggagaggt cgttgacggc ctggaggccg ccgaaccgct tgccgatccc
     1321 gcggaccgat agaagcgtca cggcgcctcc tcttctgcgg ggttccggga gaccatccgt
     1381 ctcagatcgg agaggagatg acgccgaagc agcccgtcgg gcgcgaacat catgatcagg
     1441 atgaggatgg cgccgaagac ggcgtcgtcg taggtcccga aatacccgcg gagcgacagg
     1501 tagttcagga ccaggctcat cgacagggcg ccccagaggt tcgccatccc cccgatcgcg
     1561 acgatcgcga cgtaccgcac cgacttcatg accccggcct cggacggacc gatgccgcca
     1621 ttgtagtggg tgagaaggac cccggcgagg gcggcgaaca ccgcgctcag cacgaacgtg
     1681 tgcagcttgt aacgggccgt gggaatcccc atcgcttccg ccgcgtcctc ggcgccatgt
     1741 accgcggcga gggcccttcc gacccgggat cggatcaggt tcagcaggag caccatcccg
     1801 aggat
//
LOCUS       DATGYW010000537         1938 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_421386, whole genome shotgun sequence.
ACCESSION   DATGYW010000537 DATGYW010000000
VERSION     DATGYW010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421386"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..133
                     /locus_tag="VK429_07495"
     CDS             <1..133
                     /locus_tag="VK429_07495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011640307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HLN91685.1"
                     /translation="DATAISLCMDNDLPIVVFNLTKRGNILKAVLGERIGTVVHGGK"
     gene            134..688
                     /gene="frr"
                     /locus_tag="VK429_07500"
     CDS             134..688
                     /gene="frr"
                     /locus_tag="VK429_07500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012830392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HLN91686.1"
                     /translation="MEALVKDTSARMERSIEAFRKELGKVRTGRASFSLLDGVKVDYY
                     GTPTPLQQVGTLSVPESRLITVTPWDTKMIGPIEKAIQGSGLGLNPSSDGKMVRIPIP
                     PLTEERRRELAKVVRKMGEDARVAVRNVRREAIEKLKDREKKKEISEDVVKRGQERIQ
                     KETDAHVKKIDEILKSKEQEILEV"
     gene            688..1440
                     /locus_tag="VK429_07505"
     CDS             688..1440
                     /locus_tag="VK429_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013163204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HLN91687.1"
                     /translation="MTSEGSAPPSLPRHVAIIMDGNGRWANLRGLPRIEGHRMGVRSV
                     RAVVECARELRIPCLTLYAFSLENWGRPEPEVVALMTLLKEFLVSELSLLHRHRIRLR
                     VIGETASLPFAVRQVLDHTVSATAGNTEMTLTLGLSYAGRNEIVRAARRLAADAVDGK
                     IAPEEITEEMFSTRLDTAGIPDPDLVIRTSGELRISNFLLWQSAYAEFAFTDVLWPDF
                     GKAEFLQALDEYSRRHRRFGLTADQAVKPPGK"
     gene            1445..>1938
                     /locus_tag="VK429_07510"
     CDS             1445..>1938
                     /locus_tag="VK429_07510"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HLN91688.1"
                     /translation="MLRKRIATAAVLIPLLIACIVLSVGRPGGWPFLLLCAVAAGLCA
                     NEGFRMFLNGARDRAGGVALAVLVFFSGALLPGSFGVPAVLVCVLLSVFHVLPGAADP
                     AEKARRAATLCLGAVSVGGLLSTYPRTLLLPRGEHWVLLGILAVEAGDTMAYFTGRAV
                     GRRKL"
BASE COUNT          323 a          639 c          663 g          313 t
ORIGIN      
        1 ggatgccacg gccatctccc tgtgcatgga caacgacctc cccatcgtcg tgttcaacct
       61 gacgaagcgg gggaacatcc tgaaggcggt gctgggcgag aggatcggca ccgtggtcca
      121 cggagggaag taaatggaag cgctggtgaa agacacctcc gcccgcatgg agcggagcat
      181 cgaagcgttc cggaaggaac tggggaaggt gcgcacgggg cgcgcctcct tctcgctgct
      241 ggacggggtc aaggtggact actacggcac ccccacgccg ctccagcagg tggggaccct
      301 ctcggtcccc gaaagccgac tgatcaccgt gaccccctgg gacaccaaga tgatcgggcc
      361 gatcgagaag gcgatccagg gaagcggcct cgggctgaac ccgtcgagcg acgggaagat
      421 ggtccgcatc ccgatcccgc ccctcacgga ggagcgccgc agggagctgg ccaaggtggt
      481 ccggaagatg ggcgaagatg cgcgcgttgc ggttcgcaac gtccgccgcg aggcgatcga
      541 aaagctgaag gaccgggaga agaagaagga gatctccgag gacgtggtca agcgcgggca
      601 ggagcggatc cagaaggaga cggacgccca cgtgaaaaag atcgacgaga tcctcaagtc
      661 caaggaacag gagatcctgg aggtctgatg acctccgaag gaagcgcgcc cccttccctg
      721 ccgcggcacg tcgccatcat catggacggc aacggccggt gggcgaacct gcgggggctt
      781 ccgcgcatcg aggggcaccg gatgggggtt cgctccgtcc gcgccgtcgt cgagtgcgcc
      841 cgggaacttc gcatcccgtg cctcaccctg tacgccttct cgctcgagaa ctggggccgc
      901 cccgagccgg aggtcgtcgc gctcatgacc ctcctgaagg agttcctcgt cagcgagctt
      961 tccctgctcc accggcaccg gatccggctt cgcgtcatcg gagagaccgc ctccctgccg
     1021 ttcgcggtcc ggcaggtcct ggatcacacc gtttcggcca cggcggggaa taccgagatg
     1081 accttgacgc tggggctttc gtacgcgggg cgcaacgaga tcgtccgtgc ggcacgccgc
     1141 cttgccgccg atgcggtgga tgggaagatc gctccggagg agatcacgga agagatgttt
     1201 tccacccgtc tcgacaccgc gggaataccc gatccggacc ttgtcatccg caccagcggg
     1261 gaactccgga tcagcaactt cctgctctgg caatccgcct acgcggagtt cgccttcacg
     1321 gacgtgctgt ggccggattt cggcaaggcg gagttcctgc aggcgctcga tgagtactcc
     1381 cgccgccaca ggcgtttcgg gctgaccgcc gaccaggccg tcaagccccc ggggaaatag
     1441 cgcgatgctc cggaaaagga tcgccaccgc cgccgttctg atcccgctcc tgatcgcctg
     1501 tatcgtgctc tccgtcggac gccccggggg gtggccgttc ctgctgctat gcgcggtcgc
     1561 cgcggggctt tgcgcgaacg aagggttccg gatgttcctc aacggcgccc gggaccgcgc
     1621 gggcggggtc gcgctcgccg tcctcgtgtt cttctccggg gcgctgctcc cgggttcctt
     1681 cggcgtcccg gcggtcctcg tctgcgtcct cctgtcggtc ttccacgtcc ttccgggggc
     1741 ggccgatccc gcggagaaag cgcgaagggc ggcgacgctc tgcctcggag ccgtctccgt
     1801 cgggggactt ctgtccacgt atccgcggac gctcctcctc ccccgcgggg agcactgggt
     1861 cctcctcggg atcctggcgg tggaggccgg ggatacgatg gcctacttca cgggaagggc
     1921 ggtcggccgg aggaaact
//
LOCUS       DATGYW010000538         2007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_193053, whole genome shotgun sequence.
ACCESSION   DATGYW010000538 DATGYW010000000
VERSION     DATGYW010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_193053"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..625)
                     /locus_tag="VK429_07515"
     CDS             complement(<1..625)
                     /locus_tag="VK429_07515"
                     /inference="COORDINATES: protein motif:HMM:NF024788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLDc N-terminal domain-containing protein"
                     /protein_id="HLN91689.1"
                     /translation="MTAIPGIWKNAILALNIAGYVFAFFLIPRIILERRHPSATLAWM
                     LGIVLLPLIGIPLYFLIGVSRVRRHIRAKIATVASVVPSLSHRLLPEEIPTVIGERCG
                     RILLATGTPPPTEGNRVTFLRGGAEAYDAVLSLIGSARDHLHAQFFILDVDPVGRRFI
                     QALAARAREGIHVRLLLDAVGSWRALRRTVRPLREAGWEVAAFMPAFP"
     gene            693..785
                     /locus_tag="VK429_07520"
     tRNA            693..785
                     /locus_tag="VK429_07520"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:728..730,aa:Ser,seq:cga)
     gene            complement(834..>2007)
                     /locus_tag="VK429_07525"
     CDS             complement(834..>2007)
                     /locus_tag="VK429_07525"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020249109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLN91690.1"
                     /translation="LSEKLSGVRVVHVNSTREGGGVAEILEWMVPLMLELGVKASWEV
                     IHGNPRFFEITKAIHNGLQGYSVGIASKDWKIYEDVNEANLDRLRPLLEEADIVFIHD
                     PQPAHLLRLCDRRKGKWIWRAHIDISRPFRPVWKVLRPMVAPYDASIFSMQQFAQPLP
                     HPQFLVPPSIDPLSEKNRDLTPSEIDAVRSEYGLDPSRPLLVQISRFDRFKDPVGVIE
                     AYRMVRKVSPVQLVLAGGGATDDPEGKAVLEDVMGAAGNDPDIHVLLLPPDSHRTVNA
                     LQRLATIILQKSTREGFGLTVTEGMWKGKPVIGGDVGGIRLQVVNHHTGFLVNTPEGT
                     AHRIRYLLHHQEGLERMGATGREFVRENFLLTRHIREYLTLMLVTLRDIKANIVNV"
BASE COUNT          337 a          660 c          671 g          339 t
ORIGIN      
        1 gggggaatgc cggcatgaag gccgccacct cccagcccgc ctcccgcagc ggccgcacgg
       61 ttcttcgcag cgcgcgccac gaccccacgg catcgagcag cagtcgaacg tggatccctt
      121 cgcgcgcccg cgcggcgagc gcctggatga accttcgccc gacgggatcg acgtcgagga
      181 tgaaaaactg cgcgtggaga tgatcgcggg cggatccgat cagggagagg acggcgtcgt
      241 acgcctcggc cccgccgcgg aggaaggtga cgcggttccc ttccgtcggc ggcggcgttc
      301 ccgtcgcgag gaggatccgg ccgcaccgct ccccgatgac cgtggggatc tcctcgggca
      361 gcagccggtg ggacagggaa ggaacgaccg acgcgacggt ggcgatcttg gcgcggatgt
      421 gccggcggac ccggctgacg ccgatcagga aatagagggg gatgccgatg agcggcagga
      481 gtacgatgcc gagcatccac gccagggtcg ccgaggggtg gcgccgctcg aggatgatgc
      541 gggggatcag gaagaacgcg aagacgtacc cggcgatgtt cagcgccagg atcgcgttct
      601 tccagatgcc cggaatcgcc gtcacggtcg catcgccccc gccatgcttg aaggaggacc
      661 cctcgcccgc tataataccg ccttccccga gcggaggggt accgaagtgg ccgtaacggg
      721 gtcgactcga aatcgacttg gcggtgcgag ccgccacgtg ggttcgaatc ccaccccctc
      781 cgccaatctt acgtacttct ttggtttggg tgggattcga acgcgagccc gcgtcacacg
      841 ttgacgatgt ttgccttgat gtcccggagg gtgaccagca tcagggtcag gtactcccgg
      901 atgtgccggg tgagaaggaa attctcgcgc acgaactccc gcccggtcgc ccccatccgt
      961 tcgaggcctt cctggtggtg gagcaggtac cggatccggt gtgccgtccc ttcgggggtg
     1021 ttcaccagaa accccgtgtg gtggttcacg acctggagcc ggattccgcc gacatccccg
     1081 ccgatgaccg gtttcccctt ccacatcccc tcggtcaccg tcagcccgaa tccctcccgg
     1141 gtcgacttct gcaggatgat cgtcgccagc cgctgaagcg cgttgaccgt cctgtgggag
     1201 tccgggggaa ggaggaggac gtggatgtcc gggtcgttgc cggccgctcc catcacgtcc
     1261 tccagaaccg ccttcccctc cggatcgtcg gtggcccccc cgcccgccag gacgagctgg
     1321 accggggaaa ccttgcgcac catccggtac gcctcgatca cgcccaccgg gtccttgaac
     1381 cggtcgaacc gcgagatctg gacgagcagg ggtcgggacg gatccagccc gtactcgctt
     1441 cgaaccgcat cgatctccga aggcgtcagg tcccgattct tctcgctcaa gggatcgatg
     1501 ctcggcggca cgaggaactg cgggtggggt agcggctggg cgaactgctg catggaaaat
     1561 atgctggcgt cgtacggtgc caccatcggc cgcaggacct tccagacggg gcggaacggc
     1621 ctgctgatgt cgatgtgggc gcgccagatc cacttcccct tcctccggtc gcagagccgg
     1681 agaaggtgcg ccggctgcgg gtcgtggatg aagacgatgt ccgcctcctc gaggagcggc
     1741 cggagccggt cgaggttcgc ctcgttgacg tcctcgtaga tcttccagtc cttggaggcg
     1801 attcccacgc tatatccctg aagcccgttg tggatggcct tggtgatctc gaaaaacctg
     1861 gggttcccgt ggatgacctc ccacgacgcc ttcacgccaa gttcgagcat gagcgggacc
     1921 atccactcga ggatctccgc gacgccgccg ccctcgcggg tggagttcac gtggacgacc
     1981 cgaaccccgg agagtttttc actgagc
//
LOCUS       DATGYW010000539         2675 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_143111, whole genome shotgun sequence.
ACCESSION   DATGYW010000539 DATGYW010000000
VERSION     DATGYW010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2675
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143111"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VK429_07530"
     CDS             complement(<1..204)
                     /locus_tag="VK429_07530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91691.1"
                     /translation="MIPSPFRRTIVPLLAGCLVSLAGCASTAPSKFYTLTPMKGSDAP
                     AGVTPVEEGVVLAVGPVRIPDYLH"
     gene            complement(201..1271)
                     /locus_tag="VK429_07535"
     CDS             complement(201..1271)
                     /locus_tag="VK429_07535"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HLN91692.1"
                     /translation="MGKQASRAMIGAFVVGAVALAVAGVMVFGSGKFCSERARYVMFF
                     DGSLKGLQVGSPVVMNGIKIGQVTDIHIVGDLAALKFYTPVYIEIEPDKIRVAGQEKT
                     TIRKFMTTKYKYYQKLLDKGMKAQLVMQSFVTGQLLVSLGLYPDKPIRLVGLVKDVPE
                     IPTIPTGLDELQKTIENVPVKAIAAKLDNVITGIDRIVNSPKLERTLANIEKATGDID
                     RLVNRVDSQVEPLSADARRTMEEARVTLGEANKALASARGALAQAEKALAFNEGVPGQ
                     VATSLLETLSSARGALDESRKALVEVQGLTSQSPYLGYEVGTTLEEMRSLSRSMQSLT
                     DYLERHPESLIRGKSPDKGDAR"
     gene            complement(1309..2082)
                     /locus_tag="VK429_07540"
     CDS             complement(1309..2082)
                     /locus_tag="VK429_07540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011699264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91693.1"
                     /translation="MSETKEPCIVAKELTMAFGSFVLQRDLNFTVNRGDIFIIMGGSG
                     CGKSTLLRHLVGLQTPAKGQVLYGDVDFWGLEPEERERFMRRFGILYQSGALWSSMTL
                     AQNVALPLEEYTDLDPESVRERVSLKLALVGLSGFEEYYPSEISGGMKKRAGLARAMA
                     LDPDILFFDEPSAGLDPISARLLDNLILELRDSLGATIVVVTHELASIFTIGNNSVFL
                     DPDAKTMLAAGDPKELRDGCPNPTVRNFLTRGEAGSAGK"
     gene            complement(2108..>2675)
                     /locus_tag="VK429_07545"
     CDS             complement(2108..>2675)
                     /locus_tag="VK429_07545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006920725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLN91694.1"
                     /translation="GAIQLKAFGAQLYVADLVGIAMVREMAAIMTGIIVAGRTGAAFA
                     AKLGTMQVNEEIDALKTMGFSSTEFLVLPRMVALFLMMPLLCLYADLMGVLGGMLVGV
                     TMLDLGIMQYYLQTKAAVNLNNLWIGLVMSAVFGVLVAFSGCLRGIQCGRSASAVGEA
                     TTSAVVTGIVSIIVATAVINVICNVLGI"
BASE COUNT          437 a          941 c          793 g          504 t
ORIGIN      
        1 gtgcaggtag tcggggatcc tcaccggccc caccgcgagg acaaccccct cttccaccgg
       61 cgtgaccccg gcgggcgcat cggatccttt catgggggtc agggtgtaga atttcgacgg
      121 cgcggtgctg gcgcatccgg cgagggatac gaggcagccc gcgaggagcg gcacgatcgt
      181 tctgcgaaag ggagagggga tcaacgggcg tctcctttgt cgggggattt cccccggatc
      241 agcgattccg ggtgccgctc caggtaatcc gtcagggact gcattgagcg ggagagggac
      301 ctcatctctt ccagggtcgt gccgacctcg taccccaggt aggggctctg ggaggtgagc
      361 ccctgcacct ccacgagggc tttccgactt tcatcgaggg caccccgcgc cgacgaaagg
      421 gtctccagca ggctggttgc gacctgcccg gggacccctt cattgaaggc gagggccttc
      481 tcggcctgcg cgagggcgcc ccgcgcggag gccaatgcct tgtttgcctc cccgagtgtg
      541 acccgggcct cttccatggt gcgacgggcg tcggcggaga gcggctccac ctgggagtcc
      601 acgcggttca ccagccggtc gatgtccccg gttgcttttt ctatgttggc gagggtccgt
      661 tccagcttgg gagagttcac gatccggtcg atcccggtga tcacgttgtc cagcttcgcg
      721 gcgatcgcct tgaccggcac gttctcgatc gtcttttgca actcgtcgag acctgtgggg
      781 atcgtgggga tctccgggac atccttgacc aggccgacca gccgtatcgg cttgtcgggg
      841 taaagcccca ggctgaccaa cagctgcccg gtgacgaaac tctgcatcac gagctgggct
      901 ttcatcccct tatccagtaa tttttggtaa tacttgtact tcgttgtcat aaatttccgg
      961 atcgtcgtct tctcctgccc ggcgacccgg atcttgtccg gctcgatttc tatgtacacg
     1021 ggcgtgtaaa acttgagtgc tgcaagatcg cccacaatgt ggatgtccgt cacctggccg
     1081 atcttgatac cgttcatcac cacgggggag cctacctgca gacccttcag cgacccgtcg
     1141 aagaacatca cgtaccgcgc ccgttccgag cagaacttcc cggagccgaa caccatgacc
     1201 ccggcgaccg ccagggccac cgccccgacg acgaaggcgc cgatcatcgc cctgctcgcc
     1261 tgctttccca tgccggttct ccttgggctg cgcgctccag tccctatttc acttccccgc
     1321 ggaccccgcc tcgccccgcg tcaggaagtt tcgcaccgtc gggttcgggc acccgtccct
     1381 aagctccttc gggtcccccg cggcgagcat ggtcttcgcg tccgggtcga ggaagaccga
     1441 gttgttcccg atcgtgaaga tgctcgccag ctcgtgggtc accaccacga tcgtcgcccc
     1501 gaggctgtcc cggagttcca gaatcaggtt gtccagcagc cgcgcgctga tcgggtcgag
     1561 cccggcggac ggctcgtcga agaacaggat gtcggggtcc aacgccatgg cccgtgccag
     1621 cccggcccgc ttcttcatcc ccccgctgat ctcggagggg taatactcct cgaaccccga
     1681 aagccccacc agcgccagct tgagcgacac gcgctcccgg acgctctccg ggtccaggtc
     1741 ggtgtactcc tccagcggga gggcgacgtt ctgcgccagc gtcatggagc tccacagcgc
     1801 cccgctctgg tagaggatgc cgaaccggcg catgaacctc tcccgctctt ccggttccaa
     1861 tccccagaag tccacgtccc cgtaaaggac ctggcccttc gcgggggtct gcaggccgac
     1921 caggtgccgc agcagggtgc ttttcccgca gccgctcccg cccatgatga tgaagatgtc
     1981 gccccggttg accgtgaagt tcaggtcccg ctgcagtacg aagctgccga acgccatcgt
     2041 cagttccttc gcgacgatgc acggttcctt tgtttcgctc atctcccggc cgttcccccg
     2101 ttgctcttca gatccccagc acgttgcaga tcacgttgat caccgccgtg gccacgatga
     2161 tgctgacgat cccggtcacc accgccgacg tcgtcgcctc cccgaccgcc gaggcgctgc
     2221 ggccgcactg tatcccgcgg agacatcccg agaaggccac cagaaccccg aacaccgcgc
     2281 tcatgaccag cccgatccag aggttgttca ggttcaccgc ggccttggtc tgcaggtagt
     2341 actgcatgat cccgaggtcg agcatcgtga ccccgacgag catccccccg agcaccccca
     2401 tcaggtccgc gtacaggcac aggagcggca tcatcaggaa cagggcgacc atccgcggga
     2461 ggacgaggaa ctcggtcgag gagaacccca tcgtcttcag ggcgtcgatc tcctcgttca
     2521 cctgcatcgt ccccagcttc gcggcgaacg ccgcccccgt gcgccctgcc acgatgatcc
     2581 cggtcatgat cgccgccatc tcccgcacca tggcgatccc caccaggtcc gccacgtaga
     2641 gctgggcgcc gaacgccttg agctggatgg ccccc
//
LOCUS       DATGYW010000540         4025 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_515954, whole genome shotgun sequence.
ACCESSION   DATGYW010000540 DATGYW010000000
VERSION     DATGYW010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4025
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515954"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1603
                     /locus_tag="VK429_07550"
     CDS             <1..1603
                     /locus_tag="VK429_07550"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN91695.1"
                     /translation="AFVAGVWVSVAFAATIFYDPVLNSPWWNVAALLFVYPYLGAGLY
                     VIVRHGFRDSPSSVERKKYQFLVVGGGIASLVAPLNFLPGTGIDFPPLAAFAVLVFFY
                     FMATGILHLHFFELPDIVGRGVVLVIQIFAFAVVFGVMEVVSGRKFWFPLAGVFLISF
                     FLLTFYPFLMRKLGGISADLLVRQSRRVQSVLSDFARKLPESTGLAEIARTVEDALAQ
                     VPFVERASLWVRPEGGTDEGIGTLPVRPEEYLRAFARFTKRYPALRIMEHGGSKAADV
                     AIWDDSFDASIPLFLRGALVAVVLFHWRGKRPSFREMDLLIPFLDGIALAVENIRQQQ
                     RIQRREHFATVGELAAGLAHEVRTPAGVIKGAAQFLSREARPKEREFLDIIVEEADRL
                     NGVVTEFLEYARPTERRPQTISLKEPVEKAIALLLRERGERMGTVGRRVLIQEPVPRV
                     NADPAEIERVVYNLLTNAVEDTGAGIPEEDRPQLFRPFFTTRERGVGMGLAICRRIVE
                     ENGGSVSVETTPGQGSRFTVKLPEA"
     gene            1608..2972
                     /locus_tag="VK429_07555"
     CDS             1608..2972
                     /locus_tag="VK429_07555"
                     /inference="COORDINATES: protein motif:HMM:NF025885.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HLN91696.1"
                     /translation="MKGTILLAEDDRNLRRVLQAMLTREGYEVAATPDGAAAAEWLDT
                     QRADALITDIRMPKMDGLALFRRCRERHPGLPVILITAFGKIEDAVEAMRAGAFDYIS
                     KPFDEAELLRVVGNAVATSEAVDREGASAPAEEWFGMVGGSPAWLDVRKVIEKAAASP
                     FSVLITGETGTGKELVARAIHRISGRRDGPFLKINGAAIPPTLWEAEMFGYEKGAFTG
                     AVQSKPGRFELADGGTFFLDEVGEVPLAVQAKLLRVLEDGEFERVGGVKTLTADVRLI
                     CASNRDLKRETSLGRFREDLYYRVSGIPIHLPPLRDRREDLVPLAEFFLARTCRELGV
                     GRKTLSPETAEALDRYPWPGNIRELENAVARAVALSDDDSLTPADLCLGLSEPEAAIS
                     PADVEGERFHESVREHKRSVIRRAIAKAGGSKSRAAEILGLSPTYLSRLLRVLGVEGK
                     GNDA"
     gene            3143..3502
                     /locus_tag="VK429_07560"
     CDS             3143..3502
                     /locus_tag="VK429_07560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91697.1"
                     /translation="MSIILPDLSAVISGIITLGANGGEQLFLPKIHTVLYQMKEHDRM
                     LAGLWFSITGSVCYSRDIENVLRDLASQGVVKIEASSVVVKNIGFPRKRLRSMLPVRQ
                     YRKLLKISRKFYARLGA"
     gene            3682..>4025
                     /locus_tag="VK429_07565"
     CDS             3682..>4025
                     /locus_tag="VK429_07565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91698.1"
                     /translation="MKKFFLGTALVFLMFQPVAGYCRGDLDVFLSNMNVQARADLPGF
                     KARLSVTFGVPVQQVEAVFISVRAPADAYMVMKVGQVARQPQEVVLEEYQKNRGKGWG
                     VLAKNLGIKPGSR"
BASE COUNT          669 a         1229 c         1388 g          739 t
ORIGIN      
        1 ggccttcgtc gccggcgtct gggtgagcgt cgcgttcgcg gcgacgatct tctacgaccc
       61 ggttctcaat tctccctggt ggaacgtcgc cgcgctcctg ttcgtctacc cgtacctcgg
      121 cgcggggctg tacgtcatcg tccgccacgg tttccgcgac tccccttcct ccgtggagcg
      181 gaagaagtac cagttcctcg tcgtgggggg cggaatcgcc agcctggtgg cgccgctcaa
      241 cttcctcccc ggcacgggca tcgacttccc gccgctggcg gcgttcgcgg ttctcgtctt
      301 cttctatttc atggcgacgg ggatcctgca cctgcacttc ttcgaacttc ccgacatcgt
      361 gggccgcggg gtcgtgctgg tcattcagat cttcgctttc gccgtggtct tcggagtgat
      421 ggaggtcgtt tccggcagga agttctggtt ccccctcgcg ggggtgttcc tcatctcgtt
      481 cttcctgctc acgttctatc cgtttctgat gcgcaaactc gggggcatct cggcggacct
      541 gctcgtccgg cagtcacgcc gggtccagtc ggtgctgtcc gacttcgcgc ggaaactgcc
      601 cgaatcgacg gggctcgctg agatcgcgcg cacggtggaa gacgctctgg cccaggttcc
      661 cttcgtggag cgcgcgtctc tgtgggtccg gcccgagggg ggaaccgacg aggggatcgg
      721 aacgctcccc gtgcggcccg aagagtacct tcgcgccttc gcccgcttca cgaagcgata
      781 ccccgcgttg cggatcatgg agcacggcgg gtcgaaggcc gcggatgtgg cgatctggga
      841 cgactcattc gacgcatcga tccccctttt tctgcggggg gccctcgtcg ccgtcgtcct
      901 tttccactgg agagggaagc ggccgtcgtt ccgggagatg gatctgctca tcccctttct
      961 cgacgggatc gcgctggcgg tggagaacat ccggcagcag cagcggatcc agcgtcggga
     1021 gcacttcgcg acggtcgggg aactggcggc ggggctggcc cacgaagtcc gaacgccggc
     1081 gggggtgatc aagggggcgg cgcagttcct ctcccgcgag gcgcgtccga aggaacggga
     1141 gttcctcgac atcatcgtcg aggaggcgga ccggctgaac ggggtggtca cggagtttct
     1201 cgagtacgcg cgtccgacgg aacgcagacc gcagacgatc tccctgaagg agcctgtgga
     1261 gaaggcgatc gccctcctcc tgcgggagcg gggggagcgg atgggaacgg tgggccggcg
     1321 cgtcctgatc caggagccgg ttccccgggt gaacgcggac cctgccgaga tcgagcgggt
     1381 ggtctacaat ctcctgacga acgcggtcga ggacaccggc gcggggatcc ccgaggagga
     1441 ccggccccag ctcttccgcc ccttcttcac gacgcgggag cgcggcgtgg ggatggggct
     1501 ggccatctgc cggcggatcg tcgaggagaa cggcgggtcc gtctcggtgg agacgacccc
     1561 cgggcagggg agccggttca ccgtgaagct tccggaggcg tgagggaatg aagggaacga
     1621 ttcttctggc ggaagacgac cggaatctcc gtcgcgtcct gcaggcgatg ctgacgcggg
     1681 aggggtacga ggtggcggcg acgcccgacg gagcggcggc ggcggagtgg ctcgatacgc
     1741 agcgggccga cgccctgatc accgatatcc ggatgccgaa gatggacggg ctcgcgctct
     1801 tccgccgttg ccgcgagcgg cacccggggc tgccggtgat cctcatcacc gccttcggga
     1861 agatcgagga cgcggtcgag gcgatgcggg ccggcgcctt cgactacatc tccaagccgt
     1921 tcgacgaggc ggagctgctc cgggtggtcg gcaacgcggt ggccacgtcc gaagccgtcg
     1981 accgggaggg ggcgagcgcc ccggcggagg agtggttcgg tatggtcggc ggctcccccg
     2041 cctggctcga cgtgcgcaag gtgatcgaaa aggcggcggc gtcccccttc tccgtcctga
     2101 tcacgggaga gacgggcacg gggaaggagc ttgtggcccg ggcgatccac cggatcagcg
     2161 gtcggcgcga cgggccgttc ctcaagatca acggggccgc gatccccccc acgctgtggg
     2221 aggccgagat gttcggctac gagaaggggg cgttcaccgg ggcggtccaa tcgaagcccg
     2281 gccggttcga gctcgccgat ggggggacct tcttcctgga cgaggtgggc gaggtgccgc
     2341 tcgccgtcca ggcaaaattg ctccgggtcc tcgaggacgg ggagttcgag cgggtggggg
     2401 gcgttaagac cctgacggcc gacgtgcgcc tgatctgcgc gtcgaaccgc gacctgaagc
     2461 gggaaacttc gctggggcgg ttccgggagg acctctacta tcgggtaagc gggatcccga
     2521 tccacctccc ccccctgagg gatcggcgcg aggatctcgt gccgctggcg gagttcttcc
     2581 tcgcgcgcac gtgccgggag ctgggcgtcg ggaggaagac gctttctccg gaaactgccg
     2641 aagcgctgga ccgatacccg tggcccggca acatccgcga actggagaac gccgtcgcgc
     2701 gcgccgtggc gctctcggac gacgattcac tcacccccgc cgacctgtgc ctcggcctgt
     2761 ccgagccgga ggcggcgatc tccccggccg acgtcgaggg ggagcggttc cacgaatccg
     2821 ttcgggagca caagcgttcg gtgatacggc gggcgatcgc caaggcgggg gggagcaagt
     2881 cgcgggcggc ggagatcctc gggttgtcgc cgacctacct gtcccggctt ctccgcgtcc
     2941 tcggcgtgga gggaaagggg aacgacgcgt gacgcggggg actcccatcc tattctcgat
     3001 ccgggcttgc ggtttggttc caaacattta aaatgagggt aatgggaaca gttcagcggg
     3061 acggggtgtc taacgaataa aataaactct tgaccgattt ggcgtccgac agagccttgt
     3121 gcatctaccc ggaggtgcgc tcatgtcgat cattctgccc gacctttccg ctgtcatttc
     3181 cggcatcatc accttgggcg caaatggagg cgaacaactc ttcctgccga aaatccatac
     3241 cgttctctac cagatgaagg aacacgacag gatgctcgcc ggcctctggt tttccatcac
     3301 cggcagtgtg tgttactcgc gggatatcga aaatgtcctt cgcgatcttg cctcccaggg
     3361 ggttgtgaaa atcgaggcaa gttctgtcgt cgtgaaaaat atcgggttcc cgcgaaaacg
     3421 gctccgcagc atgctgccag tccggcaata tcggaaactc ctgaagatct cccggaagtt
     3481 ttatgcacgc ctgggagcct gatcctggat gatcttgaat cctcgccgga agatcgtgac
     3541 tgcaaacccc gtgcgaacaa ccggcttttt cgggggaaat ttgtcctatg cgggaacgct
     3601 gttgacgggg aaaccccgtg tcataattgg gatgtatcac tggggcaggc caccccggat
     3661 cttgccagag gagaatccac aatgaaaaag ttttttctcg gaaccgcgct cgtatttctc
     3721 atgtttcaac ccgtcgccgg atactgccgt ggcgacctgg acgtcttcct ctccaacatg
     3781 aacgtgcagg cccgggcgga cctgccaggg ttcaaggcca ggctgtcagt gacgttcgga
     3841 gtccccgtgc agcaggtgga agccgtcttt ataagtgttc gggcaccggc ggacgcctac
     3901 atggtgatga aggtgggcca agtggcaaga cagccccagg aggtcgtgct cgaggagtac
     3961 cagaaaaaca gaggcaaagg atggggtgtc cttgccaaga acctcggcat caagccaggg
     4021 tcgcg
//
LOCUS       DATGYW010000541         1745 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_87302, whole genome shotgun sequence.
ACCESSION   DATGYW010000541 DATGYW010000000
VERSION     DATGYW010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87302"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(217..915)
                     /gene="pgl"
                     /locus_tag="VK429_07570"
     CDS             complement(217..915)
                     /gene="pgl"
                     /locus_tag="VK429_07570"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:TIGR01198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HLN91699.1"
                     /translation="MRIDVLSDAEAVAKRAAAVIAEEARTAVAARGSFLLAVSGGKTP
                     WILLRALTTEAVPWKHVHVVQVDERVAPAGHADRNLTHLREALLEHAPLRPGQIHAMP
                     VEAPDLEEAAARYARTLGEIAGEPPVLDLALLGLGPDGHTASLVPGDPVLKVADRDVA
                     ITALYQGKRRMTLTYPMLNRSRNILWVVTGAEKVPMLKRLQDGDASIPAGRIRRDPAR
                     ILADRAAAGAGASK"
     gene            complement(919..>1745)
                     /locus_tag="VK429_07575"
     CDS             complement(919..>1745)
                     /locus_tag="VK429_07575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020711910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HLN91700.1"
                     /translation="FVNSFLEPFWNRNTIESFQITMAEDFGIQGRGAFYNATGTIRDV
                     VQNHLFQVIANFAMEPPARRDSESIRDEKVKVLKAIPPLEAKNVIRGQFRGFTSEAGV
                     APDSKTETFAAMRLDINSPRWQGVPFYVRAGKNLPVTCTEILVRFLRPPNVYSDLATA
                     PNHLRFRINPSVQVAMGMLVMVDDEKMTGGLKELAGTPAPVSDEKDAYERVLTDALEG
                     DATLFARQDYVEEAWRIVDPYLKTDSPVHAYEPKTWGPPEAAALASAIGGWHNPGG"
BASE COUNT          309 a          565 c          544 g          327 t
ORIGIN      
        1 catttcgcct ggagctgaaa cgggacaaag acgggacgga gaccctcctg tggcacggca
       61 tcgtcgatgg cacgccgcag acctttgatg tggatcctta cacgggattc tggaagcggc
      121 taggcatcgg attcctcggc atcctgccga tcgagtcgca attgtagagc gcccgacggg
      181 ggcgatccct atgcgtatac tttccccctc gttcgattat ttcgaggccc ctgctcccgc
      241 ggcggcgcga tccgccagaa tccgggccgg atcccggcgg atgcgtccgg ccggaatcga
      301 ggcgtcgccg tcctgcaggc gcttgagcat cggtaccttt tcggcccccg tcacgaccca
      361 caagatattc cgcgaacgat tgagcatcgg ataggtcaag gtcatccgcc gctttccctg
      421 atacagcgcc gtgatcgcga cgtcgcggtc ggcgactttc agcaccggat cccctggcac
      481 cagggacgcc gtgtggccgt cgggcccaag gcccaggaga gccagatcaa ggacgggagg
      541 ctctcccgcg atttcaccga gggtccgtgc atagcgcgcg gccgcttcct ccagatcggg
      601 cgcttccacg ggcatcgcgt ggatctgccc gggacgcagc ggggcgtgtt cgagaagggc
      661 ttcgcgcaga tgcgtcaggt tccggtccgc atgccccgcg ggcgcgacac gctcatcgac
      721 ctgcacgaca tgaacatgtt tccaggggac cgcttcggtg gtcagggcac ggagcaggat
      781 ccacggcgtt ttccctccgc tcaccgccag aaggaagctg ccgcgggcgg cgaccgctgt
      841 ccgggcttct tccgcgatga ccgccgctgc tctctttgcg acggcctcgg catccgaaag
      901 cacgtcaata cgcatgaact accctcccgg gttgtgccac cctccaatcg ccgacgcaag
      961 cgcagccgcc tccgggggac cccaggtttt cggctcatag gcatggacgg gagaatccgt
     1021 cttgagatag ggatcgacga tccgccaggc ctcttcgacg taatcctggc gcgcgaagag
     1081 cgtcgcatcc ccttcgaggg cgtcggtcaa tacacgctcg taggcatctt tctcatcgct
     1141 caccggagcg ggggtgcccg cgagctcctt caatccaccg gtcatcttct cgtcgtccac
     1201 catcacgagc atccccatgg ccacctggac gctcgggttg atccggaagc gcagatgatt
     1261 tggcgccgtc gccagatcgg aatagacgtt gggcgggcgg aggaagcgaa ccaggatttc
     1321 cgtgcaggtg accggaaggt tcttcccggc ccggacgtag aaaggaacgc cctgccagcg
     1381 cggggaattg atatcgagac gcatcgccgc gaaggtttcc gtctttgaat cgggcgccac
     1441 ccccgcttcc gatgtgaagc cgcggaattg cccgcggatg acgtttttcg cctcaagcgg
     1501 cggaatcgcc ttgaggacct tcaccttttc gtcgcggatc gattcgctgt cccggcgggc
     1561 cggaggctcc atcgcgaaat tcgcgatgac ctggaagagg tgattctgga caacgtcgcg
     1621 gatggtcccc gtggcattat agaacgctcc gcggccctgg atcccgaaat cctcggccat
     1681 cgtgatctgg aaactctcga tcgtattgcg gttccagaag ggctccagga aggagttcac
     1741 gaagc
//
LOCUS       DATGYW010000542         1545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_87318, whole genome shotgun sequence.
ACCESSION   DATGYW010000542 DATGYW010000000
VERSION     DATGYW010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87318"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VK429_07580"
     CDS             complement(<1..262)
                     /locus_tag="VK429_07580"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004512722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HLN91701.1"
                     /translation="MRKLIVVAGTILLCCGIAFGAGTDRKGGKPMVKLETSLGVIKVE
                     LYPDKAPVSVKNFLAYVKEGHYDGLIFHRVIRDFMIQGGGFTK"
     gene            343..>1545
                     /locus_tag="VK429_07585"
     CDS             343..>1545
                     /locus_tag="VK429_07585"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HLN91702.1"
                     /translation="MGLFLAALLSLGGLAFSGPASAEPVPLAVDAAGAEALTLSIGDA
                     VRIAVEKNLGLQVATYSPAIAETGIRKARAIYDPLLSALVDHHGSNQQVAPQSFFVDR
                     QRDFDFDASISQLLPSGATTALSFKNIWSSNNLGLPTSLYVQPQLILSFSQPLLQGLG
                     REVTERGITTADDATDSALADWTQQALNTAAAARNQYLLLVMTRESLATRQATLDLAR
                     EIKAQNEGRFAAGVLAAYQIQDSLLGVLQAQKNLLDANRVEKDAADQLRTTMHLQAGT
                     EIATTSPPLPGASEVSESDALRTAMLRRPDVVKARIAVRTAEFNEKVSRNLALPSLAL
                     QGSGGVTGLDQSYGDAFADMGSTRYPFWSVGLSFSLPIGNNSARADVAANRLIASQAR
                     TQLAATEES"
BASE COUNT          272 a          535 c          468 g          270 t
ORIGIN      
        1 ccttcgtgaa ccccccgccc tggatcatga aatcccggat cacgcggtgg aagatcaatc
       61 cgtcgtaatg cccctccttg acgtaggcga ggaagttctt cacggaaacg ggcgccttgt
      121 cggggtacaa ttccaccttg atcacgccga ggctcgtttc gagtttcacc atgggcttgc
      181 ctcctttgcg gtcggtcccg gcgccgaagg cgatcccgca gcagaggaga atcgtccctg
      241 caaccacgat cagttttcgc atcgcaacct cccggtgggt tttcggaagg aacattttac
      301 gtgatttcgg gtttctacag agaaaaacga atgaggaaaa ccatgggact ttttctggcc
      361 gcgctgctct ccctcggggg cctcgcgttt tccggccccg cctccgcgga accggtcccg
      421 cttgccgtcg acgccgccgg tgccgaagca ctgacgctgt cgattgggga cgcggtgcgg
      481 attgccgtgg agaagaacct tgggctgcag gtggcgacct actcccccgc catcgccgaa
      541 accgggatcc ggaaggcgcg cgcgatctac gatccgctcc tttcggccct ggtagaccac
      601 catggatcga accagcaggt ggccccgcag tcgttcttcg tcgaccggca acgcgatttc
      661 gacttcgacg catcgatctc ccagctgctc ccttcgggtg cgacgacggc gctctccttc
      721 aagaatatct ggtccagcaa taaccttggc cttccgacct ccctctacgt ccagccgcag
      781 ctgatcctgt cgttctccca accgctcctc caggggctgg gccgcgaggt gacggagcgc
      841 ggcatcacta cggcggacga cgcgacggat tccgccctcg ctgattggac ccagcaggcg
      901 ctgaacaccg ccgcggctgc gaggaaccag tacctgctcc tcgtgatgac ccgggagagc
      961 ctcgcgacac ggcaggccac cctggacctc gcccgcgaga tcaaggcgca gaacgagggg
     1021 cgtttcgccg ccggggtgct ggccgcgtac cagatccagg attcccttct gggggtgctc
     1081 caggcgcaga agaacctcct ggacgcgaac cgcgtcgaga aggacgccgc cgaccagctc
     1141 cgcaccacga tgcacctgca ggcaggcacg gagatcgcga ccacgtcgcc ccctcttccc
     1201 ggagcgtcgg aagtgtccga atccgatgcg ctgcggaccg cgatgctgcg gcgccccgac
     1261 gtcgtgaagg cccgcatcgc cgtccgcacc gcggaattca acgagaaggt atcccgcaat
     1321 ctcgcgcttc cctccctcgc gctccaggga agcggcgggg tcacggggct cgaccaaagc
     1381 tatggagacg cgttcgccga catgggcagc acccgatacc ctttctggtc cgtggggttg
     1441 agcttttccc tcccgatagg gaacaactcc gcccgcgcgg acgtcgcggc aaaccggctg
     1501 atcgcgagcc aggcgcggac ccagctcgcg gccaccgagg agtcg
//
LOCUS       DATGYW010000543         2220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_42068, whole genome shotgun sequence.
ACCESSION   DATGYW010000543 DATGYW010000000
VERSION     DATGYW010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42068"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..513)
                     /locus_tag="VK429_07590"
     CDS             complement(<1..513)
                     /locus_tag="VK429_07590"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HLN91703.1"
                     /translation="MAKIRILVADDHALVREGIIAILRLHGDLEVAAEAADGKEAIQK
                     ATKLKPDIVLMDIAMPGLGGLEATMEIKKNHPEIKILVLSQYDDKEYVNRLLKAGVSG
                     YILKHAVGTDLIAAIRAVARGESYLYPTITSSVIDDYLHKRDTALEDPYDMLTDREKQ
                     VLKLIAEGHAH"
     gene            complement(523..>2220)
                     /locus_tag="VK429_07595"
     CDS             complement(523..>2220)
                     /locus_tag="VK429_07595"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HLN91704.1"
                     /translation="GRYIDYVIENNVKRLYDISLSGKVDLEDKNWDPERKALKTAMEY
                     SIFTGRIFLLDRQGRVLLSYPHREEEGVDTFSLPYVRKATADLKPVITDVHTLPTTKR
                     SIVLALVPMKNKDGEVVGVAGGEIDPTNYMLSQLIAAIPTGHDTIIELVDSQGVIIAS
                     NDPRRILTCGDRYRFLKGLVTERKGSVQSCHRCKEGAPAGGRERDMLAFAPLSMAPWG
                     VIVRDPQDSVFSPSSSLRKGFLLLSAVAIVTTLLLAMGLSKGIVRPIHSLIGATRRIA
                     SGNLNDPIEVQAKDEIGTLGKSFDEMRMKLAESLANIQKYSIGLEGMVAERTGELRQS
                     REKLAALLQGIITAEEEERKRIARELHDDTSQSLNAALISLDSIVAHFPPYDPIRKQL
                     LQIREQCMAMLKGVHQMIKDLRPPILDDLGLESAIKWVLEKHIGERGIRYGFETTGNS
                     EELKARARSPVDFARLELVLFRIAQEGIINISKHANARNVAVSMVFGESTIDMEIRDD
                     GKGFDAESIYGAFRKDHHVGLGLIGMGERISLLDGTLTVRSEPGQGTRISVHVPVPA"
BASE COUNT          346 a          714 c          674 g          486 t
ORIGIN      
        1 gtgcgcgtgt ccctccgcga tgagcttgag cacctgcttt tccctgtcgg tcagcatatc
       61 gtacggatcc tcgagggcgg tgtcccgctt gtggaggtag tcgtcgatca cggaagaggt
      121 gatcgtcggg tacaggtacg attccccgcg cgcgacggcc cggatcgcgg cgatgaggtc
      181 ggtccccacg gcgtgcttca ggatgtagcc ggagacaccc gccttgagca gccggttcac
      241 gtactccttg tcgtcgtatt ggctcaagac caggatcttg atctcgggat ggtttttctt
      301 gatctccatc gtcgcctcga gtccccccag ccccggcatg gcgatgtcca tcagcacgat
      361 gtccggcttg agcttcgtcg ccttctggat cgcctccttg ccgtccgcgg cctccgccgc
      421 cacttcaagg tctccgtgga gtctcaagat ggcgatgatc ccctctctta cgagggcatg
      481 atcgtcggca acgaggatcc tgatcttcgc catggttccc cttcaggcgg gcaccggcac
      541 gtgtaccgat atccgcgttc cctggcccgg ctccgatcgg accgtgagtg tcccgtctag
      601 cagcgagatg cgctccccca tgccgatgag ccccagtccg acgtggtgat ccttccggaa
      661 ggccccgtag atcgattccg cgtcgaaccc cttcccgtcg tcccggatct ccatgtcgat
      721 ggtcgattcg ccgaacacca tggacaccgc aacgttcctg gcgttggcgt gcttgctgat
      781 gttgatgatc ccctcctggg cgatccggaa gagaacgagc tccagtctcg caaaatccac
      841 cgggctgcgc gcgcgggcct tcaactcctc gctgttcccc gtcgtctcga acccgtaccg
      901 gatccccctc tccccgatgt gcttctccag gacccacttg atcgcggatt ccagccccag
      961 gtcgtccagg atcggcgggc ggaggtcctt gatcatctgg tggactccct tgagcatcgc
     1021 catgcactgc tcccggatct gcaggagctg cttccggatg ggatcgtacg gaggaaagtg
     1081 cgccacgatc gaatccaggg agatgagggc cgcgttcaac gactggctcg tgtcgtcgtg
     1141 taattccctc gcgatccttt ttcgctcttc ctcctccgcg gtgatgatcc cctgcaggag
     1201 ggcggcgagt ttctcacggc tctgccggag ctccccggtg cgctcggcga ccatgccctc
     1261 cagtccgatg ctgtacttct ggatgttcgc cagcgattcg gcgagcttca tcctcatctc
     1321 gtcgaagctc ttcccgagag tcccgatctc gtccttggcc tgcacctcga tcgggtcgtt
     1381 caggttgccg gaggcgatcc tccgggtggc gccgatgagg gagtggattg gacggacgat
     1441 ccccttcgac aggcccatgg cgagcagcag ggtggtgacg atcgcgacgg cgctcaggag
     1501 gaggaacccc ttccggaggc ttgatgacgg cgagaacacg gagtcctggg ggtccctcac
     1561 gatcacaccc cagggagcca tggacagggg cgcgaaggcg agcatgtccc tctccctgcc
     1621 gcctgccgga gcgccttcct tgcagcgatg gcagctttgc accgagcctt ttctttccgt
     1681 gacgaggccc ttcagaaacc ggtatcgatc gccgcaggtg aggatccgtc gcgggtcgtt
     1741 ggacgcgatg attacgccct ggctgtccac gagttcgatg atcgtgtcgt ggcccgtggg
     1801 gatcgccgcg atgagctggg acagcatgta gttcgtcggg tcgatttctc ccccggcgac
     1861 ccccaccacc tccccatcct tgttcttcat gggaacaagc gcgaggacga tcgaccgctt
     1921 ggtcgtgggg agggtatgga catccgtgat gaccggcttc aggtctgccg tcgcctttct
     1981 cacgtacggg aggctgaagg tatcgactcc ctcttcttcc cggtgagggt aggagaggag
     2041 gacgcggccc tgcctgtcca ggaggaagat tctcccggtg aagatcgaat actccatggc
     2101 ggttttcagg gccttcctct cgggatccca attcttgtcc tcgaggtcga ccttcccgga
     2161 gagggaaata tcgtagagcc gcttgacgtt gttctcgatg acgtagtcga tgtaccggcc
//
LOCUS       DATGYW010000544         1579 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_143324, whole genome shotgun sequence.
ACCESSION   DATGYW010000544 DATGYW010000000
VERSION     DATGYW010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143324"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1116
                     /locus_tag="VK429_07600"
     CDS             <1..1116
                     /locus_tag="VK429_07600"
                     /inference="COORDINATES: protein motif:HMM:NF012493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRCF domain-containing protein"
                     /protein_id="HLN91705.1"
                     /translation="VSLIATPPEDRLSIRTFVVPFSGETIREAVDREIRRGGQVFFVH
                     NRVQTLPAMERYLRELLPDARIAVGHGQMDEETLSAAMDEFASRRADILLCTAIIEAG
                     LDLPNANTILVNHAHRFGLAQLYQLRGRVGRDRHRAYAYFVIPKDVALTRDATRRLAV
                     LEELTELGSGFRIASHDLEIRGAGNLLGKDQSGQIHQVGFELYTQLLSETVAEISGKT
                     SAQEEEPELELRVPAFLPDDYIAEAGERLEFYRKLSSAKTVDAADEIEMALLDRFGRL
                     PVPARALCDLARMRAGMRAAGVAELKRGDGSLFLTLSAHSAFDRAKLVSWVTRERKTF
                     SFVRGEILAMRLPGPDPAEVLAAAKNLLSRFVTGSTM"
     gene            1164..>1579
                     /locus_tag="VK429_07605"
     CDS             1164..>1579
                     /locus_tag="VK429_07605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91706.1"
                     /translation="MRKMPVLFVIFAFVASACGSAPGSGQQGKVLAVVDGEPLTEATL
                     QKEVENLPPYVRPILETAAGRAQFLESVITRNLLMREALRRGIDRRPEVADRISMARK
                     SIVLEALLRDVAEKAPGLSDEELRKIYDANPAMHQVG"
BASE COUNT          249 a          533 c          541 g          256 t
ORIGIN      
        1 gtgagcctga tcgccacccc gcccgaggac cggctctcga tccgcacctt cgttgtcccc
       61 ttttcgggcg agacgatccg cgaggcggtg gatcgggaga tccggcgggg cgggcaggtc
      121 ttcttcgtcc acaatcgggt acagaccctc cccgcgatgg agcggtacct tcgcgagctg
      181 ctccccgacg cgcggatcgc cgtggggcac gggcagatgg acgaggagac cctctcggcc
      241 gccatggacg aattcgcgtc gcgccgcgcc gacatcctcc tgtgcaccgc gatcatcgag
      301 gccgggctgg accttcccaa cgcgaacacg atcctcgtga accacgcgca ccggttcggg
      361 ctggcccagc tgtaccagct ccgtggccgc gtgggccgcg accgccaccg ggcgtacgcg
      421 tacttcgtca tcccgaaaga cgtcgccctc accagggacg ccacccggcg gctcgccgtg
      481 ctcgaggagc tcacggagct cggctcgggg ttccggatcg cctctcacga cctcgagatc
      541 cggggcgcgg ggaatcttct cgggaaggac cagtcgggac agatccacca ggtcggtttc
      601 gagctgtaca cgcagctgct ctcggaaacg gtggcggaga tctcggggaa gacctccgcg
      661 caggaggagg agccggaact ggagcttcgc gtcccggcgt tcctgccgga cgactatatc
      721 gccgaggccg gggagcgcct ggagttctat cggaagctgt cgtcggcgaa gaccgtggac
      781 gccgcggacg agatcgagat ggcgctgctg gaccggttcg gccggcttcc cgtcccggcc
      841 cgcgcgctgt gcgacctggc gcggatgcgc gccggaatgc gcgccgcggg agtggcggag
      901 ctcaagcgcg gggacggctc cctcttcctc accctttccg cccactccgc gttcgaccgg
      961 gcgaaactgg tctcctgggt gacgcgggaa cggaagacct tctccttcgt ccggggggag
     1021 atcctcgcga tgcgcctccc gggtccggat cccgcggagg tcctggcggc ggcgaaaaac
     1081 ctgttgagcc ggttcgtcac cggcagtacc atgtaacatt gggtcgcatt ccttcgaaac
     1141 ttttcaccaa ggagagccgc tccatgcgga agatgccggt tctgtttgtg attttcgcgt
     1201 tcgtcgcatc cgcctgcggg agcgctcccg ggagcggaca gcagggaaag gttctcgccg
     1261 tggtggacgg ggagcctctc acggaggcga ccctccagaa agaggtggag aatcttcccc
     1321 cctacgtccg cccgatcctc gaaaccgccg cggggagggc gcagtttctc gagagcgtca
     1381 tcacccgcaa cctgctgatg cgggaggcgt tgcggcgcgg gatcgatcgc cgccccgagg
     1441 tggcggaccg gatcagcatg gcgcgcaagt cgatcgtcct cgaggcgctg ctgcgcgacg
     1501 ttgccgaaaa ggcccccggg ctttccgacg aggagctgcg caagatctac gacgcgaacc
     1561 ccgccatgca ccaggtcgg
//
LOCUS       DATGYW010000545         1894 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_318020, whole genome shotgun sequence.
ACCESSION   DATGYW010000545 DATGYW010000000
VERSION     DATGYW010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1894
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_318020"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..579)
                     /locus_tag="VK429_07610"
     CDS             complement(<1..579)
                     /locus_tag="VK429_07610"
                     /inference="COORDINATES: protein motif:HMM:NF017262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HLN91707.1"
                     /translation="MPGKPLLALCAFFVVLALSFPAYRGWATEDFARETGRACVGCHL
                     DPSGGGELNSVGKAFLAGRAEAGKTHPVSSPFHRGVRFAAGFLHLLTAVMWFGTILYV
                     HLLLKPAYASRGLPRGELIVGWGSIVLIAVTGTILTFYRVPSTDALLHTRFGMLLMAK
                     IGIFLVMTATAFIVTFVIGPRLKARHAKVDPQK"
     gene            complement(660..1301)
                     /locus_tag="VK429_07615"
     CDS             complement(660..1301)
                     /locus_tag="VK429_07615"
                     /inference="COORDINATES: protein motif:HMM:NF039786.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6448 family protein"
                     /protein_id="HLN91708.1"
                     /translation="MAGRSVISGVAAAVIILMFSTAGSALAHCDTLDGPVISQARQAL
                     EKGDVKIVLPWVAADKEKEIREAFDLVAAVRGKGPKEKELADRYFFETLVRIHREGEG
                     APYTGLKPAGMDLGPAIPAADKALESGDPRPLLSLINEKVHEGIHKYYMAAKEKKAHA
                     GESVEAGRAYVNAYVPYLHFVERLYNDAVTPIAHGGGEGGHAGPAGHPEPHAH"
     gene            1520..1729
                     /locus_tag="VK429_07620"
     CDS             1520..1729
                     /locus_tag="VK429_07620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91709.1"
                     /translation="MVHLKPGKPHPFAILEGMPVFALPGIPAAAMISFEVFVRPAPTT
                     IAPETALAPRERVAVSLLDRSEDLP"
     gene            1726..>1894
                     /locus_tag="VK429_07625"
     CDS             1726..>1894
                     /locus_tag="VK429_07625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015837363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HLN91710.1"
                     /translation="MSVSLLLVLSACILVMAILYSSVGHGGASGYIAILALFSLAPAA
                     FKPTALVLNILV"
BASE COUNT          322 a          669 c          537 g          366 t
ORIGIN      
        1 cttctgcgga tcgaccttcg catggcgggc tttcaggcgg ggtccgataa cgaacgtcac
       61 gatgaacgcc gtggccgtca tgacgaggaa gatgccaatc ttggccatca gcagcatccc
      121 gaagcgagtg tggaggaggg cgtctgtcga ggggacccgg tagaacgtga ggatcgtccc
      181 cgtgacggcg atcaggacga tggaacccca cccgacgatc agctccccgc ggggcaaacc
      241 ccgggacgca tatgcaggct tgaggagaag gtgaacgtac aggatggtgc cgaaccacat
      301 cacagccgtc agcaggtgaa ggaagccggc ggcgaaccgg accccgcggt gaaacgggga
      361 ggaaaccggg tgcgttttcc cggcttccgc ccggcccgcg agaaacgcct ttccaacact
      421 gttgagctcc ccgccgcccg aggggtcgag gtggcacccc acgcatgccc ggcccgtttc
      481 ccgggcaaaa tcctccgttg cccatcctcg gtatgcggga aacgacagcg ccagaacaac
      541 gaagaaagcg caaagggcaa gaagcggctt tcccggcata tcgcccctcc ctcccattcg
      601 accacgctgg atccctgcgc acctcctgaa gagatcgctt aagaccccct gtccgcggtt
      661 caatgcgcgt gcggctccgg gtggcccgct ggccccgcat gtcccccttc gccgccaccg
      721 tgggcaatcg gggtaacggc atcgttgtag agccgctcga cgaagtgcag gtacggcaca
      781 tacgcattta cgtaggcgcg ccccgcctcc acgctctctc ccgcgtgcgc cttcttctcc
      841 ttcgccgcca tgtaatactt gtggatccct tcgtggacct tctcgttgat gagggacagg
      901 agcgggcggg ggtcgccgga ctccagcgcc ttgtctgccg ccggtatggc ggggcccaag
      961 tccatccccg caggtttcag ccccgtgtag ggggctcctt ccccctccct gtggatgcgc
     1021 accagtgtct cgaagaaata ccggtccgcg agctctttct ccttcggccc cttcccgcgc
     1081 acagccgcca ccagatcgaa agcctctcgg atctccttct ccttgtccgc cgccacccac
     1141 ggcaggacga tcttcacgtc ccccttctcc agcgcctgcc gggcctgcga gatcaccggg
     1201 ccgtccaggg tgtcgcaatg cgccagggcg ctccccgccg tcgaaaacat caggatgatg
     1261 accgccgctg caacgccgct gatcacgctt ctccccgcca ttttcccctc cctctcccgg
     1321 attcgggccg tctgcccatg ggtgtgtccc gagtcaagtg tcctccatgt cgccccccgt
     1381 tgctttgacc aaaatcaaca tcgttgcgta acgttgtgcg tttttggtat aacgcatcca
     1441 tcttgattgt ttaaggattt cgacgacatg gtgaaccgca agttcatcaa actccgcttc
     1501 tggacaagga tctgaactca tggtccacct gaagcccgga aaaccgcacc ccttcgccat
     1561 cctggagggg atgccggtct ttgccctccc gggcattccg gcggcggcca tgatctcctt
     1621 cgaggtgttc gtccgccccg cccccacgac gatagcgcct gaaacagccc tggcaccccg
     1681 ggaacgcgtg gccgtttccc tgctggaccg gtccgaggac ctgccgtgag cgtttccctt
     1741 ctcctcgttc tctcggcctg catcctcgtg atggcgatcc tctactccag cgtcggtcac
     1801 ggcggggcat ccgggtatat cgccatcctg gccctgttca gccttgcccc cgccgccttc
     1861 aagccgaccg cattggtcct gaacatcctg gtgt
//
LOCUS       DATGYW010000546         2109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_421791, whole genome shotgun sequence.
ACCESSION   DATGYW010000546 DATGYW010000000
VERSION     DATGYW010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421791"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VK429_07630"
     CDS             <1..572
                     /locus_tag="VK429_07630"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HLN91711.1"
                     /translation="PVIVKPAFEGSSKGVRIASRATSCDQAREMVRFVTRTYRQEAMV
                     EAFVPGAEVTVGVLGNDPPRIVGMMEIVPKTVSPAEFVYSLEVKRDWENRVAYRVPPE
                     LPGAVLSEIERCALGIYRTLGCRDFSRLDFRLDADGTPHFIECNPLPGLSPGYGDLPI
                     MADRMGIPYLSLVEEILSHALRRIGMRAA"
     gene            569..1597
                     /locus_tag="VK429_07635"
     CDS             569..1597
                     /locus_tag="VK429_07635"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91712.1"
                     /translation="MSPVATKDSRVAVLYTSVFEALKDVKEEIREDMDLAINARSVTE
                     ALRSAGHDAWTQTFGKDPSELISGLRSSGAEAVFNLSECPNLSPEKELHACALLELLH
                     LPYTGNGPLALGICNSKALAKQLMIANGIPTPRFRLYTRDPSGEPGLSYPLVVKPANE
                     DGSAGITEDSVVADLAGLRRQVNWLREGFRQDSLVEEFVDGREFNVGVLGNGTAADPH
                     RSLPPAELVYRNPRWRLCTYESKWNATHPSYAEIAPVCPADAAPETAARLSEITLACA
                     RIFGLAGYARVDFRMNAGGELFVLEVNPNPDISPDAGMARAARAAGLPYPDLILEILR
                     LGLALGAR"
     gene            1594..2073
                     /locus_tag="VK429_07640"
     CDS             1594..2073
                     /locus_tag="VK429_07640"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012792.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLN91713.1"
                     /translation="MTRIRRIEPGDREAIRGLIAGTNAFKPFEINVAMELVDVALTQK
                     EQDDYHPYVLVEDDGTVVAYACFGKNSMTTGTFDLYWIATRTDRMGKGYGRSILSFVE
                     EEVRRRGGYLLVIETSSQESYGSTRQFYDKVGCTLAAQLPDYYALGDDKLIYLKRVR"
BASE COUNT          353 a          694 c          727 g          335 t
ORIGIN      
        1 tccccgtcat cgtgaaaccc gccttcgaag gatccagcaa aggggtccgg atcgcctcgc
       61 gcgcgacgtc ctgcgaccag gcgagggaga tggtgcggtt cgtcacgcgg acgtatcgcc
      121 aggaggcgat ggtcgaagcg ttcgtgcccg gggcggaagt cacggtggga gtgctgggga
      181 acgatccgcc ccggatcgtc gggatgatgg aaatcgtccc gaagacggtt tctcctgcgg
      241 agttcgtcta ctccctcgag gtgaagaggg actgggagaa ccgcgtcgcg taccgtgtgc
      301 cgcccgagct gccgggcgcc gtcctctcgg agatcgagcg gtgcgccctg gggatctacc
      361 ggaccctcgg atgccgcgac ttctcccggc tcgacttccg tctcgacgcg gacgggacgc
      421 cgcacttcat cgagtgcaac cccctgccgg gcctttctcc ggggtacggc gatctgccga
      481 tcatggcgga ccggatgggg atcccttatc tgtccctcgt cgaggagatc ctctcccacg
      541 ccctgcgtcg catcgggatg agggccgcgt gagtcccgtc gcgacgaagg attcgcgcgt
      601 cgccgtcctg tacacctccg tcttcgaggc gctcaaggac gtgaaagagg agatccggga
      661 ggacatggac ctggcgatca acgcgaggtc ggtgacggag gccctccgtt ccgccgggca
      721 cgacgcgtgg acacagacgt tcggaaagga cccgtcggag ctgatctccg ggctgcgctc
      781 ttcgggggcc gaggcggtct tcaacctgag cgagtgcccg aacctctccc ccgaaaagga
      841 gctgcacgcc tgcgcgctcc tcgaactgct ccacctgccg tacaccggga acgggccgct
      901 cgcgttgggg atctgcaaca gcaaggcgct cgccaagcag ctgatgatcg ccaacgggat
      961 ccccacccct cgcttccggc tctatacgcg cgatccttcg ggagagccgg ggctttcgta
     1021 cccgctggtc gtgaagccgg cgaacgagga cggctcggcc gggatcaccg aggacagcgt
     1081 cgtcgccgac cttgccggct tgcgccggca ggtgaactgg ctgagagagg ggttccggca
     1141 ggattccctc gtcgaggagt tcgtggacgg gcgcgagttc aacgtcggcg tgctcgggaa
     1201 cggcacggcg gccgatccgc accggtcgct cccccccgcg gagcttgtgt accggaaccc
     1261 gcgttggcgg ctctgcacct acgaatcgaa gtggaacgcg acgcacccct cgtacgcgga
     1321 gatcgctccg gtctgccccg ccgacgctgc gccggaaacc gccgcgcggc tctcggagat
     1381 caccctggcc tgcgcgcgca tcttcgggct cgccggctac gcccgggtcg acttccggat
     1441 gaacgcggga ggggagctgt tcgtcctcga ggtgaacccg aaccccgaca tctcgcccga
     1501 cgccgggatg gcgcgcgcgg cgcgggcggc ggggctcccc tatccggacc tcatcctcga
     1561 gatcctgcgg ctcggcctgg ctctgggggc gcggtgacac ggatccgccg catcgaaccg
     1621 ggggaccgcg aggcgatccg cggactgatc gcaggaacga acgcgttcaa accgttcgag
     1681 atcaacgtgg cgatggagct ggtggacgtc gcgctcacgc agaaagagca ggacgactac
     1741 cacccgtacg tactggtgga ggacgacggc acggtggtcg cctacgcctg cttcgggaag
     1801 aactcgatga cgacggggac cttcgacctg tactggatcg cgacgcggac ggaccggatg
     1861 ggaaaggggt acggacggtc catcctttca ttcgtcgagg aagaggtacg gcggcgcggg
     1921 gggtacctcc tggtgatcga aacgtcgtcg caggagagct acggctccac gcggcaattc
     1981 tacgacaagg tcggctgcac cctcgccgcg cagctgcccg actactacgc gttgggcgac
     2041 gacaagctca tctacctgaa gcgggtgcgc tgacggccgg tcgaaaaccc cagaaccggg
     2101 acgttccta
//
LOCUS       DATGYW010000547         2119 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_143453, whole genome shotgun sequence.
ACCESSION   DATGYW010000547 DATGYW010000000
VERSION     DATGYW010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143453"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1853
                     /gene="bamA"
                     /locus_tag="VK429_07645"
     CDS             <1..1853
                     /gene="bamA"
                     /locus_tag="VK429_07645"
                     /inference="COORDINATES: protein motif:HMM:TIGR03303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HLN91714.1"
                     /translation="DLRERILAFYRKERYLRAQVDVAVGEESDGKVPLTVKVQEGQKG
                     FIKGIRFEGNRGIPADALLRQMSTRERGTFHWFTGSGKYNEEEWNQDLNAIVGYYQKE
                     GYVRMKIAGVDDDWDAGGGITKVVRVEEGTRYRLREILFLGNAHFLRQEILALMRNKE
                     GAFVDYVGLEHDQEAIAAKYRNSGFLDATVEGTLDFDEGKETVVARFTFVEGSRYRLG
                     SVIVQGNLLTDPTAVLRENPIPSGRYAGEEALLKFQQSVYRTGLYKSVRLQRIKRPAE
                     GVLDLVVEVEEAMFLDLEFGAGYATDTGVRGSVYAKDRSLDDLGRSLSGFVLIGQKQQ
                     NYQLEMREPHVLGNRWKWEGVLTASHLFKENPSFNLKKTALIAGINQEILERSTVSFQ
                     YEFSLNETFDVEPGAIISPEDQGRANIAAVRALVVLDFRDDPFNPKRGMYASGVGELA
                     SQLVGSQVDYWLLTGQTSYYLPVVRRNSIALSARAGVVLPYGITPEVPIQKRFFAGGR
                     TTVRGFKQDTLGPIGADGAPIGGDFQLILNAEIRVPLQYGLLAAAFVDAGSVWLRNQP
                     SYGFDLRETAGLSIRYITPVGPISVDYGWKLDPRPGESAGEWSFTIGMVF"
     gene            1906..>2119
                     /locus_tag="VK429_07650"
     CDS             1906..>2119
                     /locus_tag="VK429_07650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91715.1"
                     /translation="MPEGNKRREGGIIPDRSGWRVGFAFAWCGLLGVTAAASLSLGGF
                     STTSGVFLAGAAAGEFVLAVASSVLLE"
BASE COUNT          393 a          603 c          745 g          378 t
ORIGIN      
        1 acgacctgcg ggagcggatc ctggcctttt accggaagga aaggtacctg cgcgcacagg
       61 tcgacgtggc ggtcggggag gagagcgacg ggaaggtgcc gttgaccgtg aaggtccagg
      121 agggtcagaa gggattcatc aagggaatcc ggttcgaggg gaaccgcggg attcccgcgg
      181 atgcgcttct gcgccaaatg agcacccggg aacgggggac gttccactgg ttcacggggt
      241 ccgggaagta caacgaggag gaatggaacc aggacctgaa cgccatcgtc ggctactacc
      301 agaaggaagg gtacgtccgg atgaagatcg ccggcgtgga cgacgattgg gacgcgggcg
      361 gggggatcac gaaggtcgtc cgtgtcgagg agggaacaag gtatcgcctc cgggagatcc
      421 tgttcctggg gaacgcccac ttcctgcggc aggaaatcct tgcgttgatg cggaacaagg
      481 aaggggcgtt cgtcgactac gtcgggctgg agcacgacca ggaggcgatc gcagcgaaat
      541 acaggaactc ggggttcctg gatgcgacgg tcgaggggac gctcgacttc gacgagggga
      601 aggaaaccgt cgtcgcgagg ttcacattcg tggagggatc gaggtatcgg ctagggtccg
      661 tcatcgtcca ggggaaccta ctgaccgatc ccaccgcggt gctgcgggag aacccgatcc
      721 cctccggtcg ctacgcgggc gaagaggctc tcctcaaatt tcagcagtcc gtgtacagga
      781 cgggtctcta caagagcgtc cggctccagc ggatcaagcg gcccgcggaa ggggtgctgg
      841 acctcgtcgt ggaggtcgag gaggcgatgt tcctggatct ggagttcggg gccggatacg
      901 ccaccgatac cggtgtgcgg gggtcggtct acgccaagga caggagcctc gacgacctcg
      961 gccggagcct ctcgggcttt gtcctgatcg gccagaaaca gcagaattac cagctggaga
     1021 tgcgcgagcc gcacgtcctg ggaaaccgct ggaagtggga gggagtgttg accgcctccc
     1081 acctgttcaa ggagaaccca agcttcaatc ttaagaagac ggccctcatc gccgggatca
     1141 accaggagat cctggaacgg tccacggtgt cgttccagta tgagttctcg ctcaacgaaa
     1201 cgttcgatgt cgaacccggc gcgatcatct cgccggagga ccaggggagg gcgaacatcg
     1261 cggctgtgcg ggccctcgtg gtcctcgatt tccgggacga cccgttcaac ccgaagaggg
     1321 gcatgtacgc atccggggtg ggtgaactgg caagccagct ggtcggttcg caggtggact
     1381 actggttgct gacggggcag accagctact atctccccgt cgtccggcgg aactccatcg
     1441 ccctctccgc tcgggcgggc gttgtcctcc cgtacgggat aactcccgag gtcccgatcc
     1501 agaagcggtt cttcgcgggc gggcggacga cggtgcgtgg attcaagcag gacacgctgg
     1561 gtccgatcgg ggcggacgga gcacccatcg ggggggactt tcagttgatc ctgaacgcgg
     1621 agatacgggt gccccttcaa tacggcctgc tcgcggcggc ctttgtggac gccggaagcg
     1681 tctggttgag aaaccaaccc tcgtacggct tcgacctgcg cgagaccgcc gggctcagca
     1741 tccggtacat caccccggtt ggacctatca gcgtcgatta cgggtggaaa ctggatcccc
     1801 gccccgggga gtccgccggg gagtggagtt tcacgatcgg catggtgttc tgatatcccg
     1861 caatcctccg tttcgggcaa gagggattcg tgataatttc ccctcatgcc ggagggaaac
     1921 aaaaggcgcg agggcgggat catcccggat cgttccgggt ggcgggtcgg gttcgcgttc
     1981 gcttggtgcg gtcttctcgg ggtgacggcg gcagcttccc tttccctcgg gggtttctcc
     2041 acgacttccg gcgttttcct ggcgggggcg gccgccgggg aattcgttct cgccgtcgcc
     2101 agttccgtcc tcctcgagc
//
LOCUS       DATGYW010000548         1730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_87613, whole genome shotgun sequence.
ACCESSION   DATGYW010000548 DATGYW010000000
VERSION     DATGYW010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87613"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..717
                     /locus_tag="VK429_07655"
     CDS             <1..717
                     /locus_tag="VK429_07655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91716.1"
                     /translation="TLLGPPMEKYPREVPAAFRLRELKNTLASMKLKDLRLSALVHLD
                     LLTVEETRRIVLPFLAKYPSFYEMPSKGLRELILAVAAGVDGRSITYFIERYGSGWLA
                     MTKPVDYIVWKLMPEEERVDALRRDNERMDAAMMTRHLARYLHSESERDLSDAGKQIA
                     LLTDARFVADHGAILTRLGAEGEGERIKRLYDTVTLSSARMAGQRGEERESAYQAIRG
                     LIADAAGVFAATMEGEGSDR"
     gene            714..920
                     /locus_tag="VK429_07660"
     CDS             714..920
                     /locus_tag="VK429_07660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91717.1"
                     /translation="MIFEYMDRMVMFQDTPEGLTADMGWLKEAGEDGWELVTSVPLIA
                     PNRDGIAYGTVGCQMILKRSRKTQ"
     gene            1208..>1730
                     /locus_tag="VK429_07665"
     CDS             1208..>1730
                     /locus_tag="VK429_07665"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HLN91718.1"
                     /translation="MAEKWRTEKKRPKIKVLPWPAIPAPTVDEVYAGVDEKRKEYSLW
                     VESAVRQQFNANKPESLNGIRVLDMTANQIIGHWCSSHFSELGAEVIMVEPPGGDPLR
                     KLTPFGREEYMFTAQNGEKCGARFLAEARNKFSVTLNVETEEGRNLLKKIIPQVDLLI
                     ENSAPGHYDKLGIG"
BASE COUNT          368 a          510 c          577 g          275 t
ORIGIN      
        1 acgctcctgg gtcccccgat ggagaagtac ccgcgagagg tcccggctgc gttccgcctg
       61 cgggagctga agaacaccct cgcctcgatg aagctgaagg accttcgcct ctccgcgctg
      121 gtccacctcg acctgctgac cgtcgaggag acccggcgga tcgtcctccc cttcctcgcg
      181 aaataccctt ccttctatga aatgccctcg aaggggctgc gggagctgat actggccgtc
      241 gccgcgggcg tggacggccg atcgatcacg tacttcatcg agcggtacgg ctccggctgg
      301 ctggcgatga cgaagccggt cgactacatc gtgtggaagc tcatgcccga ggaggagcgg
      361 gtcgacgcgc tccggcggga caacgagcgg atggacgccg cgatgatgac gcgccacctg
      421 gcccggtacc tccactcgga gagcgagcgg gacctgtcgg acgccgggaa gcagatcgcg
      481 ctgctcacgg acgcgcgctt cgtggcggac cacggggcga tcctcacgcg cctgggggcg
      541 gaaggggagg gggagcggat caagcggctc tacgacaccg tgacgttgtc gtccgcccgg
      601 atggcggggc agcgcgggga ggaacgcgag tcggcgtacc aggcgatccg ggggttgatc
      661 gccgacgcgg cgggagtgtt cgccgcgacc atggaggggg aggggagcga ccgatgatct
      721 tcgaatatat ggacaggatg gtgatgttcc aggacacgcc ggaagggttg acggcggaca
      781 tggggtggct gaaggaggcc ggggaagacg gctgggagct tgtgacctcc gtccccctca
      841 tcgcccccaa ccgggacggg atcgcctacg ggacggtggg gtgccagatg atcctcaagc
      901 gttccaggaa gacgcagtga gcgaagagat caaaacacgt tttatctgta aaaaaagggc
      961 ttgacacaaa acagcgtgtt gcggtattaa taaaacgcat ttataaaacc acgccggcca
     1021 tttcgtggaa catcccgatt ttcggcggtt ttttccaacc cgccaaatcg ttccatccaa
     1081 ggagatggcg tccttgaaaa tttgcggaaa gggggagtaa cgaccggaaa agagaccatc
     1141 gttcaaggct gcaccaggtt tagcgagagg caggtacgga aagcaaattt ctagaaggag
     1201 gggaagcatg gctgaaaagt ggcgcacgga aaagaagcgg cccaaaatca aggtccttcc
     1261 ctggcccgcc atcccggcac cgacagtgga cgaggtgtac gccggcgtgg acgagaagcg
     1321 gaaggagtac tccctctggg tggaatcggc cgtccggcag cagttcaacg ccaacaagcc
     1381 cgagtcgctg aacggaatcc gcgtcctgga catgaccgcc aaccagatca tcgggcactg
     1441 gtgctcctcg cacttctcgg agctcggcgc cgaggtcatc atggtcgagc cgcccggcgg
     1501 ggacccgctg cggaaactca cccccttcgg ccgggaagag tacatgttca ccgcccagaa
     1561 cggggagaag tgcggcgccc ggttcctggc ggaggcccgg aacaagttct ccgtcaccct
     1621 caacgtcgag accgaagagg gtcgcaatct tctgaagaag atcatcccgc aggtcgacct
     1681 cctcatcgaa aactccgccc cgggtcacta cgacaagctc gggatcggct
//
LOCUS       DATGYW010000549         2683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_475126, whole genome shotgun sequence.
ACCESSION   DATGYW010000549 DATGYW010000000
VERSION     DATGYW010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_475126"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..505)
                     /locus_tag="VK429_07670"
     CDS             complement(<1..505)
                     /locus_tag="VK429_07670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012097807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HLN91719.1"
                     /translation="MVMVERVEAIYQDVVKRNPGEIEFHQAVKEVLECLGPVLVKYPD
                     FTEAKIIERICEPERQTIFRVPWQDDSGEVQINRGFRVQFNSALGPYKGGLRFHPSVY
                     LGIIKFLGFEQIFKNSLTGMPIGGAKGGSDFDPKGKSDNEVMRFCQSFMTELWRIIGE
                     HTDVPAGD"
     gene            652..1668
                     /locus_tag="VK429_07675"
     CDS             652..1668
                     /locus_tag="VK429_07675"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HLN91720.1"
                     /translation="MKDRFDDRLRTIPTGALHGLLRRLSAIEAFRGRWESAPKPGSRL
                     LRRVRESVASRSAAASCRIAGESRPAAASGVADALRAVFDGHAGMPPTEERILALHAA
                     AFRHLPEERSCAGRYKSGGLHEKGDRDFLSEPVALRSPGPLLIPAQMETLAGWLPSRL
                     DGGEFHPLLVVAAYLLEFLAIRPFANGNGRVSRLLTNLLLLRCGHAYLPYGSLDAAIH
                     ARREEYYLALRRSQASRNLPRPDISPWLFAFLDALEEMQRLEANEVLARFPGEAALSA
                     NQAAVMDLAAKEGDVTNRRVAETLGLPRETAKQTLNRLVALGALRRLGAGRATRYRPN
                     AGEP"
     gene            complement(1758..>2683)
                     /locus_tag="VK429_07680"
     CDS             complement(1758..>2683)
                     /locus_tag="VK429_07680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012097705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HLN91721.1"
                     /translation="IDDVARASPDLPIDLYAVRRSALLRGAGASPRPSDEGWVLTFGK
                     LLSETPFVPYLREMLGVLRDAYEYPVDAEFTANFLPDGRCLVNLVQCRPLQVKEGGKI
                     VEPPKRIPRSTLLLESRGPVIGQSSLSRLDRVIFVDPAAYSALSQRDSPSVARLIGRI
                     VHLPAEGGRRNILLLGPGRWGTSTPSLGVPVSFAEIDTVSAICEIIGVGMPVVPDVSL
                     GTHFFNDLVEANMLYLAVHPTRRGDSLNLKFLAGAPNRLAELLPEDAEWAGVVRVIDF
                     PDAGDGRVPYLNADSFRQRVVCYLAPSGQEM"
BASE COUNT          424 a          960 c          882 g          417 t
ORIGIN      
        1 tgtcgcccgc ggggacgtcc gtgtgctcgc cgatgatccg ccacagctcc gtcatgaagc
       61 tctggcagaa ccgcatcacc tcgttgtccg acttcccctt cgggtcgaag tccgaccccc
      121 ccttggcgcc gccgatcggc atccccgtca gggagttctt gaagatctgc tcgaacccga
      181 ggaacttgat gatcccgagg tagaccgagg ggtggaaccg gagcccaccc ttgtacggcc
      241 cgagggcgct gttgaactgc acccggaagc cgcggttgat ctgcacctcc ccgctgtcgt
      301 cctgccaggg cacccggaag atcgtctgcc gctcgggttc gcagatccgc tcgatgatct
      361 tcgcctcggt gaagtcgggg tacttcacca ggaccggccc gaggcattcg aggacctcct
      421 tgaccgcctg atggaactcg atctcgcccg ggttccgctt caccacgtcc tgatagatcg
      481 cctccacacg ttccaccatc accatcgctc ttctcctttt cgcctcgtcg acggattgcg
      541 ccgggatctc cgggcgcgcc ctccaatgta cccgtcccgt ccgaccggtc aagcgaagtc
      601 gtcggaatcg ggtataatcg ggcatatgca cccggatacg gagaggcacc cttgaaggac
      661 cggttcgacg accggctgcg gacgatcccg acgggagcgc tccacgggct gctccgccgc
      721 ctgtcggcga tcgaggcgtt ccgcggacgg tgggaaagcg ccccgaagcc cgggagccgg
      781 ctcctgcggc gtgtacggga atccgtcgca tcccggtccg cggcggcctc ctgccggatc
      841 gcgggcgaga gccgtcctgc ggcggcatcc ggggtcgccg acgcgctgcg agccgtcttc
      901 gacggccacg cggggatgcc tccgacggag gaacgtatcc tcgccctgca cgcggcggcg
      961 ttccggcatc tccccgaaga aagatcctgc gcgggcaggt acaagtcggg cggacttcac
     1021 gaaaaaggcg atcgggactt cctgtcggag ccggtcgccc ttcggtcccc cggcccgctc
     1081 ctgatccccg cgcagatgga gacactcgcc gggtggctcc cctcccggct cgatggcgga
     1141 gagttccacc ccctgctcgt cgtcgcggcg tacctcctcg agttcctcgc catccggccc
     1201 ttcgccaacg gaaacgggcg ggtgagccgc cttctcacga acctcctgct cctccggtgc
     1261 gggcacgcgt atctgccgta cggctccctc gacgcggcga tccacgcccg cagggaggag
     1321 tattacctcg cgctccgccg gagccaggcg agccggaacc tgccgcgtcc cgacatctcg
     1381 ccgtggctgt tcgcctttct cgacgcgctg gaggagatgc agcggctgga ggcgaacgag
     1441 gtcctagcgc ggttccccgg cgaggcagcg ctgtcggcaa accaggccgc cgtgatggac
     1501 ctcgccgcga aggaggggga tgtgacgaac cggcgggtgg cggagaccct cggcctccca
     1561 cgcgaaacgg cgaagcagac gctcaaccgc ctggtcgccc tcggtgcgct gcgacgcctc
     1621 ggcgccggcc gggcgacccg ctaccgcccg aatgcgggag agccttagtg ctcccttacg
     1681 actccttccc gggcgatgcc ccccactccc gtaagaaaaa cgctccctgg ggtacccccg
     1741 catcaggaat gtttgtatta catttcctgt cccgaggggg caaggtagca gacgacgcgc
     1801 tggcggaagg agtcggcgtt caggtacggc acccggccgt ctcccgcgtc ggggaaatcg
     1861 atgacccgga cgacccccgc ccactccgca tcctccggga gcagctcggc gaggcggttc
     1921 ggtgcgcccg cgaggaactt caggttcagg gaatccccgc gccgcgtcgg gtggaccgcc
     1981 aggtacagca tgttcgcctc gaccaggtcg ttgaaaaagt gggtccccag cgacacgtcg
     2041 gggaccaccg gcatccccac cccgatgatc tcgcagatcg ccgacaccgt gtcgatctcg
     2101 gcgaacgaga ccggcacccc gagggagggg gtgctcgtcc cccagcgccc cgggcccagc
     2161 agcaggatgt tccgcctccc cccctccgcg gggagatgga cgatccgccc gatgaggcgg
     2221 gcaacggagg gactgtccct ctgggagagc gcagagtagg cggcggggtc gacgaagatc
     2281 acgcggtcga gccgcgacag ggagctttgc ccgatgaccg gcccgcgcga ctcgagcagg
     2341 agggtgctcc gcgggatccg cttcgggggt tcgacgatct tccccccctc cttcacctgc
     2401 agcggccggc actgcacgag gttgacgagg caccgcccgt ccggaaggaa gttcgccgtg
     2461 aactcggcgt ccacaggata ttcgtaggcg tcccggagga cccccagcat ctcccgcagg
     2521 tacgggacga acggcgtctc cgacaggagt ttcccgaacg tgaggaccca cccttcgtcg
     2581 gacggccggg gagacgctcc cgcgccgcgc agcagggcgc tccggcgaac ggcgtagagg
     2641 tcgatcggca gatcggggga ggcgcgcgcc acgtcgtcga tcc
//
LOCUS       DATGYW010000550         2469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_475197, whole genome shotgun sequence.
ACCESSION   DATGYW010000550 DATGYW010000000
VERSION     DATGYW010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2469
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_475197"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..719)
                     /locus_tag="VK429_07685"
     CDS             complement(<1..719)
                     /locus_tag="VK429_07685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009605571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HLN91722.1"
                     /translation="MPTLFEKIRDRHVVTAREDGNVLLYIDRQLIHEVTSPQAFEGLR
                     RTGRSVRRPGAMLAVPDHNVPTTPDRSERIDDRESREQIEELRKNALGAGVALFDIND
                     PRQGIVHIIGPESGLVQPGITIVCGDSHTGTLGAFGTIAFGVGTSEVEHVLATQTLWQ
                     GMPRRMRVTVNGALRSPVAPKDVILAVIAKIGASGGTGYAIEFDGETIRKMSMEGRMT
                     VCNMTIEAGARFGLIAPDEIA"
     gene            829..1614
                     /locus_tag="VK429_07690"
     CDS             829..1614
                     /locus_tag="VK429_07690"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HLN91723.1"
                     /translation="MSDVVQGTRNGGVATIRMNRPERMNAYNVEMGEALLSEVSAAAE
                     DPSVRCVVLTGTGKAFSAGGDVESFAAFGEKGPAKFMGLAIGLHALIATLRRAPKPVV
                     AAVNGVAAGAGFSMALACDVAVAASSARFTLGYQNIGLSPDGGMTFFLARAVGAQRAM
                     EMTLFSRVLPAARAAEWGLVQEIFPDAEFAAGVDALAERLASGPTLAYARAKELYNRA
                     LAQPLEAQLEEERQNISRCAGSRDFREGIRAFLDKRPARFEGR"
     gene            complement(1616..>2469)
                     /locus_tag="VK429_07695"
     CDS             complement(1616..>2469)
                     /locus_tag="VK429_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HLN91724.1"
                     /translation="IDRIAGQALLAGVDLSGRILVASGRVSSEMAAKAGSLGFSVIAS
                     RTSPTDLAVRICGELGITLVGYVRGRRFNVYTHPARIAAPAAERIPGITGVILAGGRS
                     TRMGSDKALLPYQGGRFIEAIHRRMEDLFEEVIVATGETNRYDFLPCRRVADLYPGMG
                     ALGGIHAALRASGSEKIFVVACDMPYLAPDLIRHLCSLAEGVDVVVPEGDGGLEPLHA
                     LYRKGVLPVVEDALRDGQCRVVSFFDRVRVRRVPLAEVERIDPDRCAFRNINTPEEYY
                     RFRDGGG"
BASE COUNT          380 a          865 c          852 g          372 t
ORIGIN      
        1 aaggcgatct catcgggggc gatcaggccg aagcgggccc ccgcctcgat cgtcatgttg
       61 cacaccgtca tccgcccctc catcgacatc ttccggatcg tctccccgtc gaactcgatc
      121 gcgtacccgg ttccgccgga ggccccgatc ttcgcgatca ccgcgaggat gacgtccttc
      181 ggcgcgaccg gggagcgaag cgcgccgttc acggtgacgc gcatcctccg tggcatcccc
      241 tgccacaggg tctgcgtggc aaggacgtgt tcgacctccg aggtgccgac gccgaacgcg
      301 atcgtcccga aggcccccag cgtcccggtg tgggagtcgc cgcagacgat cgtgatcccc
      361 ggctggacga gcccggactc cgggccgatg atgtgcacga tcccctgcct cggatcgttg
      421 atgtcgaaca gggcgacccc cgcgccgagg gcgtttttcc tcaactcctc gatctgctcg
      481 cggctctccc ggtcgtcgat ccgctccgac cggtcgggcg tggtcggaac gttatggtcc
      541 ggcacggcca gcatcgcgcc gggccggcgc acggaacgac ctgtccgccg aagcccctcg
      601 aacgcctggg ggctcgtcac ctcgtggatc agctggcgat cgatatagag caggacgttc
      661 ccgtcctccc gcgccgtcac gacgtgacgg tcccggatct tttcgaacag cgtcggcatg
      721 attctccttt cacccgcgtc gaatatatca ttatattgct acggtgccgc cgatgggacg
      781 gaccggcggc gataccgatc gcccggcgcg gagaaagggg gggtggaaat gagcgacgtc
      841 gtccagggga cccggaacgg gggggtcgcg acgatccgga tgaaccgtcc ggaacggatg
      901 aacgcctata acgtggagat gggggaggcg ctgctgtcgg aggtgtccgc ggcggcggag
      961 gacccgtcgg tccggtgcgt ggtcctcacc ggaaccggga aggctttctc cgccggcggc
     1021 gacgtggagt cgttcgcggc gttcggggag aagggaccgg cgaagttcat ggggctggcc
     1081 atcggcctgc acgccctgat cgcgacgctt cgccgcgccc cgaaaccggt cgtcgcggcg
     1141 gtcaacggcg tggccgccgg ggccgggttc tcgatggcgc ttgcatgcga cgtcgccgtg
     1201 gccgcctcgt ccgcccgctt caccctcggg tatcagaaca tcgggctctc ccccgacggg
     1261 gggatgacct tcttcctggc ccgcgcggtg ggggcgcagc gggcgatgga gatgacgctc
     1321 ttttcgaggg tcctcccggc cgcccgggcc gccgagtggg gactggtgca ggagatcttc
     1381 ccggacgcgg agttcgccgc aggggtcgac gcgctggcgg agcggctcgc ctccggcccc
     1441 acgctcgcct acgccagggc gaaggagctg tacaaccggg cgcttgccca gcccctggag
     1501 gcacagctcg aggaggaacg gcagaacatc tcccggtgcg cggggagccg ggatttccgt
     1561 gaggggatcc gggcgttcct ggacaagcgg cccgcgcgct tcgaaggccg gtagcttagc
     1621 ctcccccgtc ccggaagcgg taatactcct cgggggtgtt gatgttccgg aaagcgcacc
     1681 gatcggggtc gatccgttcc acctccgcga gggggacgcg gcggacgcgc acccggtcga
     1741 agaaggagac cacgcggcac tgaccgtccc gcagggcgtc ctccacgacg gggaggacgc
     1801 ccttccgata caacgcatga agcggctcca gcccaccgtc cccctcggga accaccacgt
     1861 ccaccccctc cgccagggag cacaggtgcc ggatgaggtc cggggcgagg tacggcatgt
     1921 cgcacgccac gacgaagatc ttctcggagc cgctcgcccg caacgccgcg tggatccccc
     1981 ccagcgcgcc catcccggga tagaggtccg ccacccggcg gcacgggagg aaatcgtacc
     2041 ggttcgtctc gccggtggcg acgatcacct cttcgaacag atcctccatc cgccggtgga
     2101 tcgcctcgat gaaccgcccc ccctggtacg gcaggagcgc cttgtcgctc cccatccggg
     2161 tggagcgccc tcccgcgagg atcacccccg tgatgccggg gatcctctcc gcggccggag
     2221 cggcgatgcg cgccggatgg gtgtagacgt tgaacctgcg gccccgcacg tacccgacga
     2281 gggtgatccc cagctccccg cagatcctga ccgcgaggtc cgtgggagag gtgcgcgagg
     2341 cgatcacgga gaacccgagg gaacccgcct tcgccgccat ctcggaggaa acgcggcccg
     2401 aggcgacgag gatcctgccg gagaggtcga cccccgccag gagagcctgc cccgcgatcc
     2461 ggtcgatcg
//
LOCUS       DATGYW010000551         3437 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_194024, whole genome shotgun sequence.
ACCESSION   DATGYW010000551 DATGYW010000000
VERSION     DATGYW010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3437
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194024"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..651
                     /locus_tag="VK429_07700"
     CDS             <1..651
                     /locus_tag="VK429_07700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91725.1"
                     /translation="SFGGTWNMTDIARRASWAAAFLALAAIAAGCGPRSAALYEKVMG
                     SPSYGRVTESATRTREVNDGLETRFILSATWLSGPWVKAFAEEYSNIYYLDAARREQV
                     ITRWRGESEKYVRFFVALYVPDEKGNDLEKPETLWSLRVVRADEKDFEPVYIRKSSLR
                     PEEISRFFPYSGTWYRAYEVAFPLEAGELAGSPRAGSPRLKLVLSGVEGRAVLAWQ"
     gene            complement(665..2272)
                     /gene="nadB"
                     /locus_tag="VK429_07705"
     CDS             complement(665..2272)
                     /gene="nadB"
                     /locus_tag="VK429_07705"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012530306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HLN91726.1"
                     /translation="MGKVSKFLVIGSGIAGLSFALRAAKKGRVTIITKKEASESSTNY
                     AQGGIATVWSDEDTFESHIEDTHKAGAGLCHADTVDLVVRDAPARIRELIEWGVEFTR
                     QTGKREYDLHREGGHSRRRIFHAKDLTGREVERALLVRARENPRIRIFENHTAINLIT
                     RQKLSSFDHPGVDEVLGAYVLDRNTGAIHTFVADVTVLATGGPGKVYLYTSNPDVATG
                     DGVALAYRAGATIANMEFVQFHPTCLYHPRAKSFLISEAVRGEGAILLNRAGKRFMEG
                     AHPMKELAPRDIVARAIDAEMKRTGEDCVYLDIRFKGPAFIRKHFPNIYGTCLTFGID
                     MTKEPIPVVPAAHYQCGGVRTNLHGETDIQRLFALGECAGTGLHGANRLASNSLIEAL
                     VFSHSAVQRASTAYIGKPRPRIDIPKWDPGKAQEPDEGVVVSHNWEEIRRTMWNYVGI
                     VRSNKRLSRALDRIELLKREISEYYWNFKVTGDLLELRNICTVAELIVRCAMQRKESR
                     GLHTTIDYPYLDDEHGRKDTLVRRTRF"
     gene            2342..2929
                     /locus_tag="VK429_07710"
     CDS             2342..2929
                     /locus_tag="VK429_07710"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HLN91727.1"
                     /translation="MVQLSRLFILSFLLWPVVSGADIYRYVDGEGVIHYSNTQPDKKF
                     TLYLREGPKASPRSQASAIPGASWMTGYVDRFSRANDLPPALVHAIIKAESNGQRKAV
                     SRKGAKGVMQLMPFTSKRLRVNDPFDPIENIEGGIKYIKELLVAFEGDLTNTIAAYNA
                     GPGAVRKYGGVPPYQETRLYVRLVMDLYRQYSAVE"
     gene            2926..>3437
                     /gene="pgsA"
                     /locus_tag="VK429_07715"
     CDS             2926..>3437
                     /gene="pgsA"
                     /locus_tag="VK429_07715"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HLN91728.1"
                     /translation="MTSNSRLNAPNVLTLLRILAIPVVVLILLPPAGREISFTRSVAA
                     FSLFVIATITDLFDGYIARRYHMVTTLGKLLDPLADKLLVCAAMTMLIPPGRVPAWMA
                     VIVVGREIGVTALRGVASTEGVIIAASKLGKAKTLLLNIGVAALILHYPILGIPVHGV
                     GMVFLSAGLVL"
BASE COUNT          526 a         1138 c         1105 g          668 t
ORIGIN      
        1 tccttcgggg ggacgtggaa catgactgat atcgcgcggc gcgcgtcctg ggcggcggcg
       61 ttcctggccc tcgcggcgat cgcggccggt tgcggtccgc ggtcggccgc cctctacgag
      121 aaggtgatgg ggtccccttc ctatggacgg gtcacggagt ccgcgacccg cacccgcgag
      181 gtcaacgacg ggcttgagac acgattcatc ctgtccgcca cctggctctc gggaccgtgg
      241 gtcaaggcgt tcgccgaaga gtattccaac atctactatc tcgacgcggc gcggcgggag
      301 caggtgatca cccgttggcg cggggaatcg gagaagtatg tccgtttctt cgtcgccctc
      361 tacgtcccgg acgagaaggg gaacgatctg gagaaacccg aaacgctctg gagccttcgc
      421 gtcgtgcggg cggacgagaa ggacttcgag cccgtctaca tccgcaagtc gtccctgcgt
      481 ccggaggaga tctcccgatt cttcccgtac tcggggacgt ggtaccgggc gtacgaggtc
      541 gcgtttcccc tggaggcggg tgagctcgcg gggtcgcccc gggccgggtc gccgcgcctg
      601 aagctggtcc tgtcgggcgt ggagggtcgc gccgtcctcg cgtggcaata gcccgggaga
      661 ttccttaaaa acgggtgcgg cggaccagcg tgtccttgcg cccgtgctcg tcgtccaggt
      721 acgggtagtc gatcgtcgtg tggaggcccc ggctctcctt gcgctgcatg gcgcaccgga
      781 cgatcagctc cgccaccgtg cagatgttgc gcagttcgag caggtcgccc gtcaccttga
      841 agttccagta atactccgag atctcccgct tcagcaactc gatccggtcg agcgcgcgcg
      901 acagccgctt gttcgatcga acgatgccga cgtagttcca catcgtccgg cggatctcct
      961 cccagttgtg ggagacgacg accccctcgt ccggttcctg cgcttttccc gggtcccact
     1021 tcgggatgtc gatccggggc ctcggtttcc ctatatacgc ggtcgaggcg cgctggaccg
     1081 cgctgtgcga gaagacgagc gcctcgatca gggagttcga ggcgagacgg ttcgcgccat
     1141 gaagccccgt tcccgcgcac tcccccaggg cgaagagccg ctggatgtcc gtctccccgt
     1201 gaaggttcgt ccgcacccct ccgcactggt agtgcgccgc cgggaccacc gggatcggct
     1261 ccttcgtcat gtcgatgccg aacgttagac acgtcccgta gatgttcggg aaatgcttcc
     1321 ggatgaacgc cgggcccttg aagcggatgt cgagatagac gcaatcctcc ccggtgcgct
     1381 tcatctccgc gtcgatcgcc cgcgcgacga tgtccctggg ggcgagctcc ttcatcgggt
     1441 gggcgccctc catgaaccgc ttcccggcgc ggttcagaag gatcgcgccc tcgcctcgga
     1501 ccgcctcgga gatgaggaac gacttggcgc gcgggtggta gaggcaggtg gggtggaact
     1561 ggacgaattc catgttggcg atcgtcgccc ccgcccggta cgccagtgcg actccgtccc
     1621 ccgtggcgac gtcggggttg ctcgtgtaca ggtacacctt tcccggaccg ccggtggcga
     1681 ggaccgtcac gtccgccacg aaggtgtgga tcgctccggt attcctgtcc agcacgtagg
     1741 cgccgagcac ttcgtcgacc cccgggtggt cgaaggagga gagtttctgc cgcgtgatga
     1801 ggttgatcgc cgtgtggttc tcgaagatcc ggatccgggg gttctcccgg gcgcggacga
     1861 ggagcgcccg ttccacctcg cgcccggtca ggtccttcgc gtggaagatc ctgcggcgcg
     1921 agtgcccccc ctcgcggtgg aggtcgtact ccctcttgcc ggtctgccgg gtgaattcca
     1981 ccccccactc gatcagctcg cggattctcg ccggggcgtc ccgcaccacg aggtcgaccg
     2041 tgtcggcgtg gcaaagtccc gcccccgcct tatgggtgtc ctcgatgtgg gactcgaagg
     2101 tgtcctcgtc gctccagacg gtggcgatcc cgccctgcgc gtagttggtg ctcgattcgg
     2161 acgcctcctt cttggtgatg atggtgaccc ggcccttctt cgccgcccgg agcgcgaaac
     2221 tcaatccggc gatcccgctg ccgatgacca ggaacttcga cacctttccc atgacgtctc
     2281 ccccatctgc gggcccacgt ggattgactt tggcggggtc cagtctttag aatgattgat
     2341 tatggttcaa ttatcgcgcc ttttcatcct ttctttcctc ctctggccgg tcgtatccgg
     2401 tgcggacatc taccggtacg tcgacgggga gggcgtcatc cactactcga atacccagcc
     2461 ggacaagaag ttcacgctct atcttcggga agggccgaaa gcctctcccc ggtcgcaggc
     2521 gtccgcgatc cccggggcaa gctggatgac cgggtatgtc gaccggttct cccgggccaa
     2581 cgatctgccc cccgcgctcg ttcatgccat catcaaggcg gaatcgaacg gacagcgcaa
     2641 agccgtctcc cgcaagggcg ccaagggggt gatgcagctg atgccgttca cgtcgaagcg
     2701 cctgcgggtc aacgatccgt tcgatcccat cgagaacatc gaggggggga tcaagtatat
     2761 caaggaactc ctcgtcgctt tcgaagggga cctcaccaac acgatcgcgg cgtacaacgc
     2821 cgggccaggc gcggtcagaa agtacggcgg cgtccctcct taccaggaaa cccgtttgta
     2881 cgttcgcctc gtgatggacc tgtaccggca atactccgcg gtcgaatgac cagcaactcc
     2941 cgtctgaacg cccccaacgt gctgacgctg ctgcggatcc ttgcgatccc ggtggtggtc
     3001 ctcatccttc tcccgcccgc gggcagggag atctccttca cgcgttcggt ggcggcgttc
     3061 tccctgttcg tcatcgccac gatcaccgac ctcttcgacg gctacatcgc gcggcgctac
     3121 cacatggtca ccaccctggg gaaactgctc gaccctctgg ccgacaagct gctcgtgtgc
     3181 gccgcgatga cgatgctcat cccgccggga cgggtcccgg cgtggatggc ggtcatcgtg
     3241 gtcggccgcg agatcggcgt cacggcgctg cgcggggtgg cctccacgga aggggtgatc
     3301 atcgccgcct cgaaattggg gaaggcgaag accctgctcc tgaatatcgg ggtcgcggcc
     3361 ctcatcctcc attatccgat cctggggatc ccggtccacg gcgtggggat ggtgttcctg
     3421 agcgccgggc tggtcct
//
LOCUS       DATGYW010000552         2123 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_475266, whole genome shotgun sequence.
ACCESSION   DATGYW010000552 DATGYW010000000
VERSION     DATGYW010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_475266"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..271)
                     /locus_tag="VK429_07720"
     CDS             complement(<1..271)
                     /locus_tag="VK429_07720"
                     /inference="COORDINATES: protein motif:HMM:NF024881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HLN91729.1"
                     /translation="MDCGTALGKIIAKADGLLPRQEEAELAEHLAGCPSCAADDAAIV
                     ATGPVLRALTGIRAKEKAPALDAMWTRVRAGIEESRETRRRASWIA"
     gene            complement(285..875)
                     /locus_tag="VK429_07725"
     CDS             complement(285..875)
                     /locus_tag="VK429_07725"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLN91730.1"
                     /translation="MNERERGGVADDALIRTALAGDDAAFGELVERYKSRAFAVAVGI
                     VGDGDDALDVVQDSFIKAYYKLKEFRFGSNFYTWFYRLLVNQAIDRWRKSARSAEVPF
                     DESWLSEDASPPDSFAYPRTPEDLARDRELGDALQRAVDALPEYHRAVIVLREVDGMA
                     YDEIAKVLGCSVGTVMSRLHYARGKLKESLKSHREG"
     gene            complement(922..>2123)
                     /gene="polA"
                     /locus_tag="VK429_07730"
     CDS             complement(922..>2123)
                     /gene="polA"
                     /locus_tag="VK429_07730"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HLN91731.1"
                     /translation="IDMPLLPVLHRIEEKGIRIDPGIFAELSKGLARDISAIERKVAA
                     AAGTDFNINSPKQLAFLLFEKLGLPPVKKTKTGYSTDVDVLERLKGLHEIPSLVLEYR
                     TVAKIRSTYVDVLPGKIDPRDGRIHTTLSQTQAATGRLSSSDPNLQNIPIRTDLGRRI
                     RAGFVAEKGTLFVGADYSQVELRLLAHLSGDAELIRRFRLGDDIHTATAAAVFGVAPS
                     AVTPELRRRAKVINFGILYGMSPFGLSRELGIGGKEAKTYIDHYFDRYPGVKEYIDGL
                     KTSARKDGYVFTIMGRRRFLKDIDSRNKVLREAAERMAINTPIQGSAADLIKMAMIRV
                     DREFREAGMAARLILQVHDELIVEAPDREAGGSERILKGAMEGVAKLSVPLTVSVSRG
                     KNWGEIH"
BASE COUNT          344 a          749 c          653 g          377 t
ORIGIN      
        1 gcgcgatcca cgaggcgcgc cgccgcgtct cccggctctc ctcgatcccc gcgcgcaccc
       61 gcgtccacat cgcatcgaga gcgggagcct tctcctttgc acggatcccg gtcaaggcgc
      121 gcagcacggg ccccgtcgcc acgatcgccg catcgtccgc cgcacacgag gggcacccgg
      181 ccaggtgctc cgcgagctcc gcctcctcct gccgcggaag gaggccgtcg gctttcgcga
      241 tgatctttcc cagagccgtc ccgcaatcca tcttcgtccc ttccctaccc ttccctgtgc
      301 gatttcaggg actctttcag tttaccgcgc gcgtagtgca gccgcgacat caccgttccc
      361 accgaacacc cgaggacctt ggcgatctcg tcgtacgcca tgccgtcgac ctcccgaaga
      421 acgatcaccg cccggtgata ctccgggaga gcgtcgacgg cgcgctggag ggcgtccccg
      481 agttcccggt cccgggccag gtcctcaggg gtccgcgggt acgcgaagct gtcgggcggc
      541 gacgcatcct cggaaagcca gctctcgtca aagggcacct ccgccgaccg ggccgacttt
      601 cgccaccggt cgatcgcctg gttcaccagg aggcggtaga accaggtgta gaagttcgag
      661 ccgaaccgga actccttcaa cttgtaatac gccttgatga aggagtcctg aacgacgtcg
      721 agcgcgtcgt ccccgtcccc cacgatcccg accgcaacgg cgaacgcccg actcttgtac
      781 cgttccacga gttcgccgaa cgccgcgtcg tcacccgcga gggccgtccg gatcagcgcg
      841 tcgtcggcga cgccgcccct ctccctctcg ttcataggac ggctgcacgc ggcggagtat
      901 tcaccatgcc gaacaggaaa atcagtggat ttccccccag ttcttccccc ggctcaccga
      961 gacggtcagg ggaaccgaca gcttcgccac cccctccatc gcccctttca ggatccgctc
     1021 ggacccgccg gcctcccggt cgggcgcctc gacgatcaat tcgtcgtgaa cctggaggat
     1081 caaccgcgct gccatcccgg cctcgcggaa ctcccggtcg acccggatca tggccatctt
     1141 gatcaggtcg gcggcgctcc cctggatcgg cgtgttgatc gccatccgct ccgcggcctc
     1201 ccgcagcacc ttgttccggg aatcgatgtc cttgaggaag cgtcggcgcc ccatgatagt
     1261 aaaaacatat ccatcttttc gagcacttgt cttcaatcca tcaatgtatt ccttcacgcc
     1321 tggataccgg tcgaaatagt ggtcgatgta cgtcttcgct tccttcccgc cgatccccag
     1381 ctcgcgcgac agaccgaaag ggctcatgcc gtagaggatg ccgaagttga tcaccttcgc
     1441 gcggcgacgc agctccggtg tgacggcgga cggggccacg ccgaagacgg cggccgccgt
     1501 tgcggtgtgg atgtcgtctc ccagccggaa gcggcggatc agctccgcgt ccccggagag
     1561 gtgcgcgagc aggcgcaact ccacctggga gtagtccgcc ccgacgaaga gggtcccctt
     1621 ctccgcgacg aacccggccc ggatccggcg gccgaggtcg gtgcggatcg ggatgttctg
     1681 caggttcgga tcggaggagg agagcctccc ggtggccgcc tgcgtctggg agagcgtcgt
     1741 gtggatccgg ccgtccctcg ggtcgatctt ccccggaagg acgtcgacgt acgtggagcg
     1801 gatcttcgcg acggttcggt attcgagcac cagcgacggg atctcgtgga ggcctttcag
     1861 ccgctccagg acgtccacgt cggtggagta gcccgtcttg gtcttcttga cggggggaag
     1921 ccccagcttc tcgaagagga ggaaggccag ctgcttcggc gagttgatgt tgaaatcggt
     1981 cccggcggcg gccgccacct tccgctcgat ggcggagatg tcgcgggcga gccccttgga
     2041 aagctccgcg aagatcccgg gatcgatccg gatccccttc tcctcgatcc ggtggaggac
     2101 agggagaagc ggcatgtcga tcc
//
LOCUS       DATGYW010000553         1593 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_194070, whole genome shotgun sequence.
ACCESSION   DATGYW010000553 DATGYW010000000
VERSION     DATGYW010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194070"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..812
                     /locus_tag="VK429_07735"
     CDS             <1..812
                     /locus_tag="VK429_07735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013707595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN91732.1"
                     /translation="NRYKYTASGYTYLGFRLSHPFFKDKRVRQAIAHAADKKALIDGV
                     LLGLGQEATGPYKPGTWAHNPGVRKYPHDPLRAKALLAEAGWREKDGVLVKDGQPFEF
                     TVLTNAGNDARAKTAAILQQNLAEVGIRMKIRTVEWAAFINEFIDKRKFDAVILGWNI
                     TPDPDQFDIWHSSKTGPKELNHVGFANPEVDRLLDEGRSTFDLEKRRKAYFRIQEILA
                     EEQPYVFLFVPEALPVVHHRFRGIVPAAAGITYNFVKWYVPAALQKHRVQP"
     gene            828..>1593
                     /locus_tag="VK429_07740"
     CDS             828..>1593
                     /locus_tag="VK429_07740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011341613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLN91733.1"
                     /translation="MLRYIARRLLLTVPLLVGISLVSFLMMHMAPGGPIGAGTDLNPK
                     ATAESRARLKAYYGLDQPLHVQYGRWLGRMATLDFGESFSPDGRPVAEKIRERIPITL
                     TINVLSMGLIFLVAIPVGVYSAVRKGSLFDRISTVAVFTGFAIPTFWLALLMMILFGV
                     KLGWLPISGISSLDHESLGAIGKLADRAHHLLLPVLLAGFGGLAGMSRYMRSNMLEVI
                     RQDYIATARAKGLPERTVVFRHAMRNALLPVITILGL"
BASE COUNT          270 a          517 c          536 g          270 t
ORIGIN      
        1 tcaacaggta caagtacacg gcgtcggggt acacatacct gggcttccgc ctctcccacc
       61 ccttcttcaa ggacaagcgg gtccggcagg cgatcgccca cgcggcggac aagaaggcgc
      121 tgatcgacgg ggtcctcctc ggcctggggc aggaggcgac ggggccgtac aagcccggaa
      181 cctgggcgca taacccgggc gtccggaagt acccgcacga ccctttgcga gcgaaggcgc
      241 tgctcgccga ggcggggtgg agggagaagg acggggtgct cgtgaaggac gggcagccgt
      301 tcgagttcac ggtgctcacg aacgcgggga acgacgcgcg cgccaagacg gcggcgatcc
      361 tgcagcagaa cctggccgaa gtcggaatcc ggatgaagat ccggaccgtg gagtgggcgg
      421 ccttcatcaa cgagttcatc gacaagcgga agttcgacgc ggtcatcctc gggtggaaca
      481 tcactcccga tcccgatcag ttcgacatct ggcactcctc caagacgggc ccgaaggaac
      541 tgaaccacgt cgggttcgcg aaccccgagg tggaccgcct gctcgacgag ggacgaagca
      601 cgttcgacct tgaaaagcgg agaaaggcgt acttccggat ccaggaaatc ctggccgagg
      661 aacaaccgta cgtcttcctc ttcgttcccg aggcgctgcc ggtggtgcac caccggttcc
      721 gcggcatcgt gccggccgcg gccggcatca cgtacaactt cgtcaagtgg tacgtcccgg
      781 cggcgctcca gaagcaccgg gtccaaccgt aagtctgcgc ggacgcgatg ctccggtata
      841 tcgcgcgtcg gctcctgttg accgtccccc tcctcgtagg gatcagcctt gtctcgttcc
      901 tgatgatgca catggccccc ggcgggccga tcggcgcggg gaccgatctc aacccgaagg
      961 cgacggccga gtcgcgggcg cggctcaagg cgtattacgg cctcgaccag ccgctccacg
     1021 tccagtacgg gcggtggctc ggccggatgg cgacgctcga tttcggggag agcttctccc
     1081 cggacgggcg gccggtggcg gagaagatca gggagcggat cccgatcacg ctgacgatca
     1141 acgtcctgtc gatggggctc atcttcctgg tggccattcc cgtgggggtc tactcggcgg
     1201 tgcgcaaggg gtccctcttc gaccggatct ccacggtggc cgtcttcacc gggttcgcca
     1261 tccccacctt ctggctcgcc ttgctgatga tgatcctctt cggcgtgaag ctcggctggc
     1321 tgccgatctc cgggatttcg tcgctggacc acgagtcgct cggcgcgatc ggcaagctcg
     1381 ccgaccgggc gcatcatctc ctgctccccg tgctgctggc ggggttcgga gggctggcgg
     1441 ggatgtcgcg gtacatgcgg tcgaacatgc tcgaggtgat ccggcaggac tacattgcga
     1501 ccgcacgggc caaggggctc cccgagagga cggtcgtctt ccgtcacgcg atgcggaacg
     1561 cccttctccc ggtgatcacg atcctcgggc tgt
//
LOCUS       DATGYW010000554         1786 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_422164, whole genome shotgun sequence.
ACCESSION   DATGYW010000554 DATGYW010000000
VERSION     DATGYW010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1786
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422164"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..501)
                     /locus_tag="VK429_07745"
     CDS             complement(<1..501)
                     /locus_tag="VK429_07745"
                     /inference="COORDINATES: protein motif:HMM:NF040068.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B12-binding domain-containing radical SAM
                     protein"
                     /protein_id="HLN91734.1"
                     /translation="MREIPPSIRKPSRYSGGEVRPPSIAWDEARVRVLLAFPDVYEIG
                     MSHLGILLLREILSARPGTLCERVFAPWTDYEAHLRAAGLPLASLETGRPAGAFDLLG
                     FSLCYELTYTNVLAMLDLSGIPLLSKDRSEEHPFVVAGGVCTLNPAPVAPFFDALLVG
                     DGEEASL"
     gene            570..>1786
                     /locus_tag="VK429_07750"
     CDS             570..>1786
                     /locus_tag="VK429_07750"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN91735.1"
                     /translation="MGYLRLFGTMGAETSFREQDFFGREEELSALTRAALEGSRGIGS
                     SFMIYGPPNIGKTSLLLKLAKVLGTSGVGEGLPRPFPLYFSFSQILSHPLALSQHFLQ
                     EFLLQLLRFLGDERPSAFDPAAMCDRLASFGVTGCREVLAAHERCTAEGDGLSALVNA
                     LSFPFSASGDLFYPVFLFDDFQYTGKLQGVPDGAMLSILRPYIKSGNFPMFLSGSSPG
                     RVTAALKREGLFGTFQMIEVGGLSTESSLRMWGHLCERRRVDIPASLLPRASERLGRI
                     PAYQRMLVEEIFFRNAKVPDAVTLENLYAVSVTEGKLNRYWREFFENTFPDRGRRGRA
                     IRFLKRVLCDRFPLDTVEGAISLMGASEEEGGAILSALEFKGLLKADLDQLTFVGDPV
                     LTDFLYWAFERGVL"
BASE COUNT          279 a          585 c          591 g          331 t
ORIGIN      
        1 gagcgacgct tcctctccgt ccccgacgag gagggcgtcg aagaaggggg ccacgggggc
       61 ggggttcagg gtgcacacgc ccccggccac cacgaacggg tgctcctccg accggtcctt
      121 cgacaggaga gggattccgg aaaggtcgag catcgcgagg acgttcgtgt atgtaagttc
      181 gtagcacagg gagaatccga ggaggtcgaa cgccccggcg ggccgccccg tttcgagcga
      241 cgcgagcggc agcccggcgg cgcgcagatg cgcctcgtaa tcggtccatg gggcgaagac
      301 gcgctcgcaa agggttccgg gccgcgcgga gaggatctcg cgcaggagca ggatcccgag
      361 gtgcgacatg ccgatctcgt acacgtcggg aaaggcgagc agcacgcgca cacgggcttc
      421 gtcccacgcg atggagggag ggcggacctc gccgccgctg tatcgcgacg gtttccggat
      481 ggagggggga atttcgcgca tatccttcag aaaatcccat tatatttttg aaaacgcaac
      541 ggattcacgc tacattatcc cgagggagga tggggtattt gcgtcttttc ggcaccatgg
      601 gggcggaaac gtcctttcgg gaacaggatt ttttcgggcg cgaggaagaa ctctccgccc
      661 tgacgcgcgc ggcgttggaa gggagccggg gaatcggctc ctccttcatg atctacggcc
      721 cgccgaacat cggcaagacg tcgctgcttc tcaagctggc caaggtgctg gggacctccg
      781 gcgtgggaga gggacttccc cgcccgttcc cgctctactt ttccttcagc cagatcctgt
      841 cgcacccgct ggcgctttcc cagcatttcc tgcaggagtt tctcctgcag cttctccggt
      901 tcctcgggga cgagcggcct tcggccttcg accccgcggc gatgtgcgac cgcctggcct
      961 ccttcggcgt cacggggtgc cgtgaggttc tcgccgccca cgagcggtgc accgccgagg
     1021 gggacggcct ctccgcgctc gtgaacgccc tctcgttccc gttctcggcg tcgggggatc
     1081 tcttctaccc ggtgttcctc ttcgacgact tccagtatac ggggaaactc cagggcgtgc
     1141 ccgatggggc gatgctttcc atccttcgcc cctacatcaa gtccggcaac ttcccgatgt
     1201 tcctctcggg ctcctcgccc ggccgcgtca ccgcggccct caagcgcgag gggctcttcg
     1261 gcaccttcca gatgatcgag gtgggaggcc tctcgaccga gtcctccctc cgcatgtggg
     1321 ggcacctttg cgagcggcgc cgtgtcgata tcccggcgtc cctccttccc cgcgcctccg
     1381 agcggctcgg tagaatcccc gcctaccagc gaatgctggt cgaggagatc ttcttccgga
     1441 acgcgaaggt ccccgacgcg gtcaccctgg agaacctgta cgccgtctcc gtcacggagg
     1501 ggaagctcaa ccggtactgg agggagttct tcgagaacac cttcccggac cgcgggcggc
     1561 gcgggagggc gatccggttc ctcaagcgcg tcctgtgcga ccggttcccg ctcgacacgg
     1621 tggagggcgc gatttccctg atgggggcct ccgaggagga ggggggagcg atcctctccg
     1681 ccctcgagtt caaggggctc ctgaaggccg acctcgatca gctcacgttc gtcggggacc
     1741 cggtgctgac cgatttcctg tactgggcat tcgagcgcgg ggtcct
//
LOCUS       DATGYW010000555         2487 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_422329, whole genome shotgun sequence.
ACCESSION   DATGYW010000555 DATGYW010000000
VERSION     DATGYW010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2487
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_422329"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1609
                     /locus_tag="VK429_07755"
     CDS             <1..1609
                     /locus_tag="VK429_07755"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN91736.1"
                     /translation="VSQGKSLGTISYYSTSPRQRFDMEGVHLIQTVCSQLANVIENAS
                     ILRKAQRLAQENQIKVQRISTLHDVARALMSTVKMERLLPIMLYALISPGGLNFSRAI
                     LFLTTEDGEELCARMAMGPRDRKEARRIGRLPRGLLGNGAPGAAGEEIRSLLWTDVGN
                     LSIPMSDASCLVARAVKEKRSVRTESGCGAPKGGDDAAPRGVFCGGHPPSFAAVPLVF
                     KGEARGAVYVDNLFQERPITEEEIQLLTMFASNACLAMENASLYESLLGALDTVRTTQ
                     DRLVQSEKLMALGEMAAKIAHEIKNPLTAIGGFARRIASPKPGRGAPPVERYARIILK
                     EVERLERIVNETLYFSRGMAPSFRAVNLNTEIREVLLMFREEFEEARISPMIDLSPDL
                     PVIFADPDQLRQVVWNLVSNAVQAMGGSGTLTIATHLADPGEGIGVVLDVSDSGGGIA
                     HDVVQNIFNPFFTTKAKGTGLGLPIVHAIIEKHGGAIHLDNREGVGVAFSIFLPLVPK
                     EGGAGERILEQLRKGGMNETGNKTHPG"
     gene            1578..>2487
                     /gene="mqnE"
                     /locus_tag="VK429_07760"
     CDS             1578..>2487
                     /gene="mqnE"
                     /locus_tag="VK429_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020674796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HLN91737.1"
                     /translation="MKPETRHIRDKVEAGERLTDSDALALYRTRDILAVGEMAALANR
                     RVNGDRVYFIVNRHVNPTNICVNRCRFCAFSKGKDDPLAYTMTMDEILHRAEEAREQR
                     ATELHIVGGLHPDLPFDFYLTMLRSLRERFPSLHVQAFTAVEIDYFRKITGLPLSGVI
                     AQLKDAGLGSLPGGGAEIFAPEIRNEICPEKIPGDRWLEVMEAVHAAGLRSNATMLYG
                     HVETLESRVDHLRRLRELQDRTGGFQSFIPLAFHPKNTEIAKGYTTGLEDLLALAVAR
                     LYLDNFRHIKSFWIMVGPKLAQISLHF"
BASE COUNT          437 a          805 c          853 g          392 t
ORIGIN      
        1 cgtttcccag gggaagtccc tcgggacgat cagctactac tccacctccc cccggcagcg
       61 cttcgacatg gaaggggtgc acctgataca gacggtgtgc tcccagctgg cgaacgtgat
      121 cgagaacgcg tcgatcctgc ggaaggcgca gcggctggcg caggagaacc agatcaaggt
      181 tcagcggatc tcgacgctcc acgacgtcgc gcgcgctctc atgtccacgg tcaagatgga
      241 gcggctgctt ccgatcatgc tgtacgccct catctccccg ggcgggctga acttcagccg
      301 ggcgatcctg ttccttacta cggaggacgg ggaggagctt tgcgcccgga tggcgatggg
      361 gccgcgcgac cgcaaggagg cgcggcggat cggccgtctt ccgcgggggc tgctgggcaa
      421 cggcgcgccc ggggcggcgg gggaggagat ccggagcctg ctctggaccg atgtcgggaa
      481 cctgagcatc ccgatgtccg acgcctcctg cctcgtggcg agggcggtga aggagaaacg
      541 gtcggtgcgg acggagtccg gctgcggggc cccgaagggc ggagacgacg cggccccccg
      601 gggggtgttc tgcggcggcc acccgccctc gttcgccgcc gttcccctgg tgttcaaggg
      661 ggaagcgcgc ggtgcggtct acgtcgacaa cctcttccag gagagaccga tcaccgaaga
      721 ggagatccag ctgctcacga tgttcgcctc caacgcgtgc ctcgcgatgg agaacgcctc
      781 cctctacgag tcgctgctgg gcgcgctcga caccgtccgg accacgcagg acaggctggt
      841 gcagagcgag aagctcatgg cgctcgggga gatggcggcg aaaatcgccc acgagatcaa
      901 gaaccccctc accgcgatcg gggggttcgc ccggcggatc gcctccccca agccggggcg
      961 gggagcgccc ccggtcgagc ggtacgcccg gatcatcctg aaggaagtcg aacggctgga
     1021 gcggatcgtc aacgagacgc tctacttctc cagggggatg gctccatcgt tccgcgccgt
     1081 aaacctgaac acggagatcc gcgaggtgct gctgatgttc cgggaggagt tcgaggaggc
     1141 tcgcatctcc ccgatgatcg acctctcccc ggacctcccg gtcatcttcg cggatccgga
     1201 ccagctccgg caggtggtgt ggaacctcgt ctccaacgcc gtccaggcga tgggggggag
     1261 cggcaccctc accatcgcca cgcacctcgc cgatcccggg gaggggatcg gcgtggttct
     1321 cgatgtgagc gactccggcg gcgggatcgc ccacgacgtg gtgcagaaca tcttcaaccc
     1381 gttcttcacc acgaaggcga aggggaccgg cctcgggctt cccatcgtcc acgccatcat
     1441 cgagaagcac gggggggcga tccatctgga caaccgggag ggggtcggtg tagccttctc
     1501 catcttcctc cccctcgttc cgaaggaggg gggggccggg gagcggatcc tcgagcaact
     1561 tcgcaagggc gggatgaatg aaaccggaaa caagacacat ccgggataag gtcgaagccg
     1621 gggagcggct gacggatagc gacgcgctcg cgctctaccg cacgcgggac atcctcgccg
     1681 tcggggagat ggcggccctg gcgaaccggc gggtgaacgg cgaccgggtc tacttcatcg
     1741 tcaaccggca cgtgaacccg acgaacatct gcgtgaaccg gtgcaggttc tgcgcgttca
     1801 gcaaggggaa ggacgatcct ctcgcgtaca cgatgacgat ggacgagatc ctccaccggg
     1861 cggaggaggc ccgggagcag cgggcgacgg aacttcacat cgtcggggga ttgcacccgg
     1921 acctcccctt cgacttctac ctgacgatgc tgcgttccct gcgggaacgg ttcccctccc
     1981 tccacgtcca ggcgttcacc gctgtagaga tcgattattt ccggaagatc accgggcttc
     2041 cgctttccgg ggtgatcgcg caattgaagg atgccgggct cggatccctt cccggcggcg
     2101 gggcggagat tttcgccccg gagatccgga acgaaatctg ccccgagaag atcccggggg
     2161 accggtggct cgaggtgatg gaggcggtcc acgcggcggg gcttcgaagc aacgccacga
     2221 tgctctacgg ccacgtggag acgctggagt cgcgcgtgga ccacctgcgg cgcctgcggg
     2281 agctgcagga ccgcaccggc gggttccagt cgttcatccc cctggccttc cacccgaaga
     2341 acaccgagat cgccaagggg tacaccacgg ggctcgaaga cctgctcgcg ctggcggtgg
     2401 cgaggctcta cctcgacaac ttccgccaca tcaagtcgtt ctggatcatg gtgggaccga
     2461 agctggcgca gatctccctc catttcg
//
LOCUS       DATGYW010000556         2332 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_194686, whole genome shotgun sequence.
ACCESSION   DATGYW010000556 DATGYW010000000
VERSION     DATGYW010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2332
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194686"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..579
                     /locus_tag="VK429_07765"
     CDS             <1..579
                     /locus_tag="VK429_07765"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLN91738.1"
                     /translation="AQARLAAMYRGGIGVPKEPVEAASWYRKAAENGNAEAFAGYGRA
                     LLYGRGVAQNESAAAKWIRKAASLGVPEGFFLRGVLYAYGRGEPKDAVEAFDAYRRAA
                     EGGYVDGQLQIAGMYLTGRGAPQSDNTAAAWYRRAAEAGSPDAQVMLGWMHEVGRGVP
                     KDLDEAVRWFGLAAFQGNDVARGHLRHIETLR"
     gene            611..1255
                     /locus_tag="VK429_07770"
     CDS             611..1255
                     /locus_tag="VK429_07770"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HLN91739.1"
                     /translation="MVVTTVRGLPPLKGVLFDFGGVLSREGFRGGLYAIARKNGLDPE
                     PFFHLASDVIYDTGYITGRATEADFWAALRRATGIRGTDAELTGEILPRFILRPVMID
                     AVRSLRRTGYVVAIASDQVDWLERLDERDPFYKEFDRVFNSYRLGKGKRDATFFDDTA
                     NALNLEPGELLFLDDNAGNVERAASRGMYAMVVVNTERTVEELRVLPPLPGSAS"
     gene            1320..1832
                     /locus_tag="VK429_07775"
     CDS             1320..1832
                     /locus_tag="VK429_07775"
                     /inference="COORDINATES: protein motif:HMM:NF019292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HLN91740.1"
                     /translation="MSNQEPRGAIEEPIPDIPARIRTGLSAGFRTSLKIIKVSVPLYV
                     GVTLLKGTPFLDLLGKLFAPVMGIFGLPGEAAFAFVAAFLLNLYAAIAVIVPLNLTPF
                     QVTQCGLMMGVAHNLVVEGGVLSTTGARGGVLTLCRLVIACAAGLLLRGLWSLWETAS
                     SWAMALPGLS"
     gene            1832..2263
                     /locus_tag="VK429_07780"
     CDS             1832..2263
                     /locus_tag="VK429_07780"
                     /inference="COORDINATES: protein motif:HMM:NF019292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HLN91741.1"
                     /translation="MDALLPALLGALKLSAKLILIIVPLVTLFEVLRYLPVFRRAGNV
                     VEPMMRGVGLTRDAAIPLFTGIFLGIAYGAGIIIRVAQQKGLPARELFLMGLFLATCH
                     SVIEDILIFIVIGGNGPAILVVRLGLAVLLTGLMARVWRPA"
BASE COUNT          342 a          749 c          839 g          402 t
ORIGIN      
        1 gcccaggcgc ggctcgccgc gatgtaccgg ggcggaatcg gggtcccgaa ggaaccggtc
       61 gaagcggcgt cgtggtatcg caaggccgcg gagaatggaa acgcggaggc gttcgcgggg
      121 tacgggcggg cgcttctcta cggccgcggc gtggcgcaga acgagtcggc cgcggcgaag
      181 tggatccgga aggccgcttc cctcggcgtc ccggaagggt tcttcctacg gggtgttctc
      241 tacgcctacg gccggggcga gccgaaggac gctgtcgagg cgttcgacgc gtaccggcgc
      301 gcggcggagg gggggtacgt cgacgggcag ttgcagatcg ccgggatgta cctcaccggg
      361 cgcggggcgc cgcaaagcga caacacggcc gctgcctggt accggcgcgc ggccgaagcg
      421 gggagcccgg acgcccaggt gatgctcggg tggatgcacg aggtcggccg gggcgtcccg
      481 aaggacctcg acgaggcggt gcgatggttc ggcctcgcgg cgttccaggg aaacgatgtc
      541 gcccggggcc atctgaggca catcgagacc ctgcgttaga accggaaatc cttgaagggg
      601 tggatagttc atggtcgtga cgacggttcg cgggctgcct ccgctgaaag gggttctctt
      661 cgacttcgga ggggtgctct cccgggaagg gtttcgcggt gggctctacg ccatcgcgcg
      721 aaagaacggt ctggacccgg aaccgttctt tcatctcgct tccgacgtca tctacgacac
      781 cgggtacatc acggggaggg cgacggaggc cgatttctgg gcggccctgc gccgggccac
      841 gggcatccgc gggaccgacg cggagctgac gggggagatt cttccccgct tcatccttcg
      901 gcccgtgatg atcgatgccg tgcggtcgct gcgccgcacg gggtacgtcg tcgcgatcgc
      961 gagcgaccag gtcgactggc tggagcggct ggacgagcgc gatcccttct acaaagagtt
     1021 cgaccgcgtc ttcaacagct accgtctcgg caaggggaag cgcgacgcga cctttttcga
     1081 cgacacggcg aatgcgttga acctggagcc cggggagctc ctgttcctgg acgacaacgc
     1141 cggaaacgtc gaacgggccg catcccgcgg catgtacgcc atggtggtcg tcaacacgga
     1201 gcgcacggtg gaagaactgc gggtgctgcc ccccctgccg ggaagcgcgt cgtgatccgc
     1261 gtcccggggg cgattccccc ggggtacaat aggccgattc ctgaaatggg gtggcctgca
     1321 tgagcaacca ggaaccgcgc ggtgcgatcg aggagccgat ccccgacatc ccggcgcgga
     1381 tccgcacggg cctgtcggcc ggcttccgga cgtccctcaa gatcatcaag gtgtcggtcc
     1441 cgctctacgt gggcgtcacg ctgctgaaag ggacgccgtt cctcgatctg ctggggaagc
     1501 tcttcgcgcc ggtgatgggg atcttcggcc ttccgggaga ggcggccttc gccttcgtcg
     1561 ccgcgttcct cctgaacctg tacgccgcca tcgcggtgat cgtgccgctg aaccttaccc
     1621 ccttccaggt gacgcagtgc ggcctgatga tgggggtcgc ccacaacctc gtcgtcgagg
     1681 gcggggtgct ctccaccacg ggggcgcgcg gcggggtcct caccctctgc cggctggtga
     1741 tcgcctgcgc ggccggcctg ctgctgcggg ggctctggag cctctgggag accgcctcct
     1801 cctgggcgat ggcgctgccg gggctttcgt gatggatgct cttcttcccg ccctcctggg
     1861 ggccctgaag ctttccgcca agctcatcct catcatcgtc ccgctggtga ccctcttcga
     1921 agtgctgcgg tacctccccg tcttccgccg ggcggggaac gtcgtggagc cgatgatgcg
     1981 cggggtgggg ctcacgcggg acgcggcgat ccccctgttc accgggatct tcctgggcat
     2041 cgcctacggg gcggggatca tcatccgcgt ggcgcagcag aaagggcttc ccgcccggga
     2101 gctcttcctc atggggctct tcctcgccac ctgccactcc gtgatcgagg acatcctcat
     2161 cttcatcgtc atcgggggga acggccccgc gatcctcgtc gtgcggctgg gtctggcggt
     2221 cctcctgacg ggactgatgg cccgggtctg gaggccggcg tgaaccggat cgccctccgg
     2281 ggtcatccat tgaagaagtt cgaaccaggg gatatcaccg gggagcgaag ga
//
LOCUS       DATGYW010000557         2944 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_254060, whole genome shotgun sequence.
ACCESSION   DATGYW010000557 DATGYW010000000
VERSION     DATGYW010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2944)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2944)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2944
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254060"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..459)
                     /gene="rpsF"
                     /locus_tag="VK429_07785"
     CDS             complement(52..459)
                     /gene="rpsF"
                     /locus_tag="VK429_07785"
                     /inference="COORDINATES: protein motif:HMM:NF013419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HLN91742.1"
                     /translation="MTPKRYETAILFDPELPEDARKEFLGKLSGIVAAYKGEVLKTDD
                     WGNRKLAYTIKKRSNAFYTFLLYTGNRGVVEEIERNIKIFEGILRHLTTLHTAELKPK
                     VEAAAPPAGDAPAADSGTPAPETPQAPAPPAEA"
     gene            complement(440..1117)
                     /gene="pth"
                     /locus_tag="VK429_07790"
     CDS             complement(440..1117)
                     /gene="pth"
                     /locus_tag="VK429_07790"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: protein motif:HMM:NF013368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HLN91743.1"
                     /translation="MGNPGRRYGATLHNAGFLAINRIAEALGVRWRAAGEASLGTGEI
                     GGRQVVLAKPMTFMNLSGDAVAPLYRKHADGPGDLVVLHDDLDLPAGAVRLKRGGGTG
                     GHNGLRSLKERLGTADFLRIRVGIGRPPAGVDPADYVLTPPAPEFRGAFDAAVAAAAE
                     AFADIARLGFEKAMTLWNAKAREDTKSGKAPPESPGGNILLAPGTSSGGSISRKEARS
                     QDDTEEV"
     gene            complement(1142..1849)
                     /locus_tag="VK429_07795"
     CDS             complement(1142..1849)
                     /locus_tag="VK429_07795"
                     /inference="COORDINATES: protein motif:HMM:TIGR00731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HLN91744.1"
                     /translation="MAMMELTADRRQYTGKEINRKRRVEGKIPGVIYGKGLETRSIEF
                     QRKPLEKFLDTARRGTVVVKMIVQDGTGGKESYAVLKETQTHPLTGRVTHVDFYEVAL
                     GRKFRVEVPLRVKGKAVGIEMGGVLDVVTRSLEVECTPDAVPEYLEVDVTSLGIGDSL
                     HLADVRFPEGVVPTEKDLRMTLAAVHTPKAEAAPAAVEEVAPEGVEGASVAEPGAKEE
                     KPEKEAKKPEKEPKKKE"
     gene            complement(1863..2804)
                     /locus_tag="VK429_07800"
     CDS             complement(1863..2804)
                     /locus_tag="VK429_07800"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015948122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HLN91745.1"
                     /translation="MTRLKIFTGNANPDLAKEICAYLCIPMGSAVIKRFSDGEVNVEI
                     RDNVRGVDVFVIQPTCPPVNDHLMELLILMDGLKRASAKRVTAVLPYYGYARQDRKVL
                     PRAPITAKLVADLLTAAGVSRLLTMDLHAGQIQGFFNIPVDHLYSAPVMLEYIKAKYG
                     NENDIVIVSPDAGGVERARAFAKRLSASLAIIDKRRLAPNVAEVMNIIGAVEGKTAIL
                     LDDMVDTAGTLAQSADALRRKGAKHVYAAATHAVLSGPAIERLEKSEIEELAVTNTIP
                     LGAKAACKKLHVLSVAPLLGEAIKRIHFQDSVSSLFV"
BASE COUNT          438 a         1004 c          939 g          563 t
ORIGIN      
        1 gaggatgaca cggttgaagg tgaccatcgg gacccttcct tgccccgccc gtcaggcttc
       61 cgcggggggc gcgggcgcct ggggcgtttc gggtgcgggc gtcccggagt ccgccgcagg
      121 ggcgtcgccc gcaggaggcg cggccgcctc gaccttcggt ttcaactccg cggtgtgcag
      181 ggtggtcagg tggcggagaa ttccttcgaa gatcttgatg ttgcgctcta tctcctcgac
      241 gacgccgcgg ttcccggtgt agaggaggaa ggtgtagaag gcgttggatc tcttcttgat
      301 ggtgtaggcg agcttgcgat tcccccagtc gtcggtcttc agcacctcgc ccttgtaggc
      361 ggcgacgatc ccggagagct tcccgaggaa ctccttcctc gcgtcctccg ggagttcggg
      421 gtcgaacagg atggcggttt catacctctt cggtgtcatc ttgcgatctt gcctcctttc
      481 ggctgatcga gcccccggac gatgtgccgg gagcaaggag tatgtttccc cccggggatt
      541 ccggcggggc cttgccactc ttggtatcct cgcgcgcctt cgcgttccag agcgtcatcg
      601 ccttctcgaa accgagccgg gcgatgtcgg cgaacgcctc ggcggcggcg gcgaccgccg
      661 cgtcgaacgc cccccggaac tctggagcgg ggggggtcag gacatagtct gccgggtcga
      721 cccccgcggg gggccgcccg atcccgacgc ggatcctcaa gaaatcggca gtcccgagac
      781 gttccttaag ggagcgcagc ccgttgtggc cgcccgtccc gccgccgcgc ttgagccgca
      841 ccgcgccggc cggcagatcg aggtcgtcgt ggaggaccac cagatccccc gggccgtcgg
      901 cgtgcttccg gtagagcggg gccaccgcgt cgccggacag gttcatgaac gtcatcggct
      961 tggcgaggac gacctgccgc ccaccgattt cgccggttcc cagcgacgcc tcgccggccg
     1021 cgcgccaccg cacccccagc gcttcggcga tccggttgat cgccaggaac cccgcgttgt
     1081 ggagcgttgc gccgtaccga cgccccggat tccccagtcc gacgacgagt ctcgtgaagc
     1141 gctactcctt cttcttcggt tccttttccg gcttcttcgc ttccttttcc ggtttctctt
     1201 ccttcgcccc gggctccgcc acgctggcgc cctcgacccc ttccggcgcc acttcctcga
     1261 ccgccgccgg cgcggcctcg gccttcggcg tgtggaccgc cgccagggtc atccgaagat
     1321 ccttctccgt cgggacgacg ccctcgggga accggacgtc cgccagatga agcgaatcgc
     1381 cgatcccgag ggaggtgacg tcgacttcga gatactcggg aacggcgtcg ggcgtgcact
     1441 cgacctcgag gctgcgggtg accacatcga ggactccgcc catctcgatg ccgaccgcct
     1501 tccccttgac ccgaagcggg acctcgaccc ggaacttcct tccgagcgcc acctcgtaga
     1561 aatcgacgtg ggttacccgg ccggtcaggg gatgggtctg ggtctccttg aggaccgcgt
     1621 acgactcctt ccccccggtc ccgtcctgca cgatcatctt gacgactacc gtcccgcggc
     1681 gggccgtgtc gagaaacttt tcgaggggct tgcgctggaa ctcgatcgac cgggtctcga
     1741 gccccttgcc gtagatgacg ccggggatct tcccctcgac gcgacgcttc cggttgattt
     1801 ccttccccgt gtactggcgg cggtccgccg tcaactccat catcgccatc ttctctctcc
     1861 tcttatacga acagcgagct gaccgaatcc tggaaatgta tcctcttgat cgcctcgccc
     1921 agcaggggcg cgaccgagag gacgtgaagc tttttgcacg ccgccttggc acccagggga
     1981 atcgtgttgg tcaccgcgag ttcctcgatc tccgatttct cgagccgctc gatggccggg
     2041 cccgacagga ccgcgtgggt ggcggcggca tagacatgct tcgccccctt tcggcgcagg
     2101 gcgtcggcgg actgggcgag cgtcccggcc gtgtccacca tgtcgtcgag caggatcgcc
     2161 gtcttcccct cgaccgcccc gatgatgttc atcacctcgg ccacgttggg cgccagccgg
     2221 cgcttgtcga tgatggcgag ggaagcggaa aggcgcttgg cgaaggcgcg cgcccgctcg
     2281 acgcccccgg cgtccgggga gacgatcacg atgtcgttct cgttcccgta cttcgccttg
     2341 atgtattcaa gcatcaccgg agccgagtaa aggtggtcca ccgggatgtt gaagaatccc
     2401 tggatctgtc cggcgtgaag gtccatcgtc agcagccggg agacgcccgc cgcggtcagg
     2461 aggtcggcca cgagcttggc cgtgatgggg gcccgcggga ggaccttccg gtcctgccgc
     2521 gcgtacccgt aatacgggag caccgccgtc acccgctttg ccgaggcgcg cttgaggcca
     2581 tccatcagga tcagcaactc catcaggtgg tcgttcacag gggggcaagt gggctgtatc
     2641 acgaaaacat ccacgccgcg cacgttatcc cggatctcga cgttcacctc gccgtcgctg
     2701 aaccgcttga tgaccgcgga gcccatcggg atgcagaggt acgcgcagat ctccttcgcg
     2761 agatccgggt tcgcgttccc ggtgaaaatc ttgagtcttg tcacgcaact cccctgtatc
     2821 cggaggaaac ttcgctgaaa ggattggata ttataccaag ggggaggggt tggcaagccc
     2881 tattcgaccg caccccggct cccaaccccc tgcatggctg ggagggaagg ggtcgaacct
     2941 tcat
//
LOCUS       DATGYW010000558         2852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_144645, whole genome shotgun sequence.
ACCESSION   DATGYW010000558 DATGYW010000000
VERSION     DATGYW010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144645"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1027)
                     /locus_tag="VK429_07805"
     CDS             complement(<1..1027)
                     /locus_tag="VK429_07805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLN91746.1"
                     /translation="MWERLRNMLIKEFLQVLRDPKMRGIIFVMPLVQVMVFGYAVTTD
                     VRDVPVAIVDFDQSVASRELLSRFSASGYFRFVAHTRDVSMSNHLLDKGSVRAILRID
                     PGFEADLRAGRTAKLQVIADGTDSNTAGIVLDYTERIAGEFSRKVLLARLSRLGGEVP
                     LPGRVELVSRAWFNENLESRNFYVPGVIAIIVMLITLMLTSMAVVREKEIGTIEQLLV
                     SPITPTEFILGKTLPFALIGYADVLLVAVVGVFWFEVPIRGSLLLLLVATTFYLMSTL
                     GIGLFISTVSRTQQQAMMSVFFFYFPAVLLSGFMFPVANMPPLVRYLTYANPLWYFLV
                     ILRGIFLK"
     gene            complement(1043..2176)
                     /locus_tag="VK429_07810"
     CDS             complement(1043..2176)
                     /locus_tag="VK429_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012531701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLN91747.1"
                     /translation="MNLRRLLAIARKEFLHIRRDPRSMGMAIAIPMLLILLFGYALTL
                     DVDNVPIAVWDQSGSPESRELISRFEGSRYFAIRGSAKGYPDIERAIEASQVMAAVVI
                     PRDFSARLTTGRVAPVQFLIDGSDSNTATIALGYAKSVALGYSREIASREARVGRTET
                     LRDPLEVRPRVWFNADMKSRNYIVPGLIAVIMMAIAALLTSLTVAKEWETGTMEQLIS
                     TPIQARELVLGKLLPYFAVGMLDVLLAVGMGEFLFHVPLRGSVALLFGMAAVFLAGAL
                     SMGMLISIVTKSQLLASQLAMVLTFLPSFLLSGFMYNIGNMPKSIQVVTYAIPSRYFV
                     ALLKGIYLKGTGLSVLLGEAALLTAFGVTMVLLAIRKFRKKLA"
     gene            complement(2173..>2852)
                     /locus_tag="VK429_07815"
     CDS             complement(2173..>2852)
                     /locus_tag="VK429_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012373744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN91748.1"
                     /translation="DLTVEENINFFSGIYRIPAERKEWVLRTAGLSDHRNTKTAFLSG
                     GWKQRLALGCAVLHEPPILFLDEPTSGVDPISRRDFWELIYDLAGKGVTVFVTTHYMD
                     EAEYCDRLGLLYRGELVALGTPEELKTRLMKEEVLEIQSERPQEAVVLLEDLSGVKGA
                     ALFGKGIHAVVDRAEEFVPVLRATLETGGFAVGRIEKIVPTLEDVFVSLVEERDRQET
                     PVSEVRR"
BASE COUNT          579 a          910 c          884 g          479 t
ORIGIN      
        1 ctttcaggaa gatcccccgc aggatgacca ggaaatacca taacgggttg gcgtaggtca
       61 ggtaccgcac cagaggcggc atgttcgcga cggggaacat gaagccggaa aggagcaccg
      121 cggggaagta aaagaagaag acgctcatca tcgcctgctg ctgcgtacgg ctgaccgtgg
      181 agatgaagag cccgatcccg agcgtggaca tcaggtagaa cgtggtggca acgaggagca
      241 ggagcaggct cccccggatc ggcacctcga accagaacac accgacgacg gcgacgagca
      301 gcacatcggc gtacccgatg agggcgaagg ggagagtctt gcccaggatg aactcggtcg
      361 gggtgatcgg ggagacgaga agttgctcga tcgtgccgat ctccttctcc cgcacgaccg
      421 ccatgctggt cagcatcaac gtgatgagca tcacgatgat cgcgatcacc ccggggacgt
      481 agaagttgcg gctctccagg ttctcgttga accaggcgcg ggagacgagt tccactctcc
      541 ccggcagagg cacctcgccg ccgaggcgtg aaagccgggc caggagcacc ttcctggaaa
      601 actccccggc gatacgctcg gtatagtcga gcacgatccc ggccgtgttg gagtccgtcc
      661 cgtcggcgat cacctggagt ttcgccgtcc gccccgcccg caggtccgcc tcgaagcccg
      721 ggtcgatgcg caggatcgcc ctcaccgacc ccttgtcgag gagatgattg gacatcgaga
      781 cgtcgcgggt gtgcgcaacg aagcggaaat accccgaggc ggaaaagcgg gaaagcagtt
      841 cccgggaggc cacgctttga tcgaaatcca cgatggccac gggaacgtcg cgcacatctg
      901 tggtgacggc gtatccgaag accatgacct gaacgagagg catcacgaag atgatcccgc
      961 gcatcttcgg gtcgcgcagg acctggagga actccttgat cagcatgttg cgcagtcgct
     1021 cccacattcc ctgcctcctc cttcacgcca gcttcttgcg gaatttccgg attgcgagca
     1081 ggaccatcgt caccccgaag gccgtaagga gcgccgcttc ccccagaagg accgaaagcc
     1141 ccgtcccctt gaggtagatc cccttgagga gggccacgaa gtacctggag gggatggcgt
     1201 acgtcacgac ctggatcgat ttcggcatgt tcccgatgtt gtacatgaac cccgacagga
     1261 ggaacgacgg gaggaaggtg agcaccatcg cgagctggct ggccagaagc tgggatttcg
     1321 tgacgatgct gatcagcatc cccatcgaaa gcgccccggc cagaaagacg gccgccatcc
     1381 cgaaaaggag agccacgctt ccccgaagcg gaacatggaa aaggaattcc cccatcccca
     1441 ccgcaaggag cacatcgagc atccccacgg cgaaatacgg gaggagtttg cccaatacca
     1501 gctcacgggc ctggatgggc gtggagatga gctgctccat cgtccccgtc tcccactcct
     1561 tggcaacggt gagggaggtc agaagggccg cgatcgccat catgatgacg gcgatcaggc
     1621 ccggaacgat gtagttcctc gacttcatgt cggcattaaa ccagacccgg gggcgcacct
     1681 cgagggggtc ccgcagggtt tccgttctcc ctaccctcgc ttcccgggac gcgatttccc
     1741 gcgaataccc gagggctacc gacttggcgt acccgagggc gatcgtggcc gtgttggagt
     1801 ccgacccgtc gatgaggaac tggaccgggg ccacgcggcc cgtcgtcagg cgtgcggaaa
     1861 agtcccgggg gatcacgacg gcggccatca cctggctggc ctcgatcgcc cgttcgatgt
     1921 cgggatatcc tttcgcgctc ccgcggatgg cgaagtaacg ggagccctcg aaccggctga
     1981 tgagctcgcg actttccgga gaaccgctct ggtcccagac cgcgatcggc acgttgtcca
     2041 catccagggt gagcgcatat ccgaacagaa ggatcagcag catgggtatc gcaatcgcca
     2101 ttcccatgct tctcgggtcc cggcggatgt gtaggaactc cttccgcgcg atggcaagta
     2161 gccgccggag gttcatcgtc gcacctccga aaccggcgtt tcctggcggt ccctctcctc
     2221 caccagggag acgaagacat cttccagagt cgggacgatt ttctcgatac ggccgacggc
     2281 gaagccgccc gtctccaggg tggcgcgcag gaccgggacg aattcctccg cccgatctac
     2341 gacggcgtgg atccctttcc cgaaaagggc cgcccctttc acgccggaaa gatcctccag
     2401 gaggacgacc gcctcctgcg ggcgctccga ctggatctcc agcacctctt ccttcatcag
     2461 gcgggttttc agctcttccg gggtccccag cgccacgagc tctccgcggt agagaagccc
     2521 cagccggtcg cagtactccg cctcgtccat gtaatgggtc gtcacgaaca cggtgactcc
     2581 cttcccggcg agatcgtaga tcagttccca gaagtcgcgg cggctgatcg ggtccacccc
     2641 ggaggtcggc tcgtcgagga acaggatggg cggctcgtgg aggaccgcgc accccagcgc
     2701 cagccgctgt ttccatccac cggaaagaaa agcggttttc gtgttccgat ggtcggaaag
     2761 gcccgccgtc cggaggaccc attccttcct ctccgccggg atccggtaga tcccgctgaa
     2821 gaaattgatg ttctcctcga cggtcaggtc ct
//
LOCUS       DATGYW010000559         3167 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_254253, whole genome shotgun sequence.
ACCESSION   DATGYW010000559 DATGYW010000000
VERSION     DATGYW010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3167
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254253"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1309
                     /locus_tag="VK429_07820"
     CDS             <1..1309
                     /locus_tag="VK429_07820"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN91749.1"
                     /translation="ARRCDGSEVILAFSGAPLTDAGGNVVAMMTIVADISDAKRAEMA
                     LRKSEEQLRQSQKMEAVGKLAGGVAHDFNNLLSVISGYTELLLLKLDGKNPARRELEE
                     IHRAGERAAALTGQLLAFSRSQVLQPKLLQLPEVVDNIGKMLRRLIGEDIEFVTEASP
                     NPWTVRADPSQVEQILMNLVVNARDAMPRGGKLVITTANLALESPFVERELTIPPGRY
                     ATMKVVDNGCGMDEAILPRIFEPFYTTKEKGKGTGLGLATVYGIVKQSDGYIRVQSAP
                     GVGTSITVYLPETLMEECEAREESRRSVSVELTGKETILLVEDEEMVRELAVESLQRY
                     GYTIMDAPNGDRALSICEGYNGTIDLLITDVVMPGMNGIELARRFRDSRPGVPVLFMS
                     GYAEGAVEHLGGIADRQSFLQKPITPTTLSRKVREMLSEPIPA"
     gene            complement(1347..1673)
                     /locus_tag="VK429_07825"
     CDS             complement(1347..1673)
                     /locus_tag="VK429_07825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91750.1"
                     /translation="MRPPPPELDVVQCRLMSKGEYVGVRLRLIGVEKFDPMTMEAYLV
                     DESTGEKFPIVRLQRIGRLAEFPVPGEKGVHNVLFRNLEGKLKVGTRVTVVVGSARKE
                     HLQLQE"
     gene            complement(1778..3100)
                     /locus_tag="VK429_07830"
     CDS             complement(1778..3100)
                     /locus_tag="VK429_07830"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_process: GO:0009966 - regulation of signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HLN91751.1"
                     /translation="MDSYPFIVAKATLLFLTAVLIVEYAIRRRKVSRESVRSRQKQQQ
                     LSAYSAELKNLKKELARKSEIAEKLPQITKKMTEKLPSDAYPAIAVRSMMDFFHAKKV
                     GYFAPEAGSSDYSLVVGTGFPSDWLDKVRIHPGEGILGMALQKRVVVSRVDPHSSSGR
                     RSSLCSLENMGVAPDFVAPVFGISGTVGALVIAGCPFSLEGERVYVSMFADQLSTMLQ
                     NAALLDSNRYATWVDHLTGVANRLYFQQRFESEIRRTGNYRQTLALFMFDIDGFKRIN
                     DTHGHHAGDVVIKKMAEIVKKTTRGGDLVGRYGGDEFIVLITSTTEKQAISFSEKLRE
                     KISATDIAIPGTEVPVRITVSGGLAMFPTHGQSTTELFRAADDALYESKRQGRNRILL
                     AASVGLDGGIAKGTDADLETPTATDIPVGTGSDTVDYPVGEPSGDPAT"
BASE COUNT          642 a          913 c          997 g          615 t
ORIGIN      
        1 ggcgcggagg tgcgacggat cggaggtcat ccttgccttc tcgggagcac ccctcaccga
       61 cgcgggtgga aacgtagtcg ccatgatgac gatcgtcgcc gacatcagcg atgcgaaacg
      121 ggcggagatg gcgttgcgga aaagcgagga acagctccgc caatcccaga agatggaggc
      181 ggtgggaaaa ctcgcggggg gcgtggccca cgatttcaac aacctcctct cggtgatcag
      241 tgggtacacc gagctgcttc tgctcaaact cgatgggaag aacccggcgc gcagggagct
      301 cgaagagatc cacagggcag gcgaacgcgc tgcggccctg acagggcagc tcctcgcctt
      361 cagccggagc caggtcctgc agccgaaact cctgcagctt ccggaggtgg tggataacat
      421 cgggaagatg ctcaggcgac tgatcgggga ggacatcgag ttcgtcacag aggcgtcccc
      481 gaatccatgg actgttcgcg cggacccgag tcaggtcgag cagatcctga tgaatctcgt
      541 cgtcaacgcc agggacgcca tgccccgggg cggaaagctg gtgattacca ccgcaaacct
      601 tgccctggag tcgccgttcg tcgagaggga gctgacgatc ccacccgggc gatacgcgac
      661 catgaaggtc gtcgacaatg ggtgcggcat ggacgaggcg atcctgcccc ggatcttcga
      721 gccgttctac acaacgaagg agaaggggaa gggcacgggc ctcggtctgg ccacggtgta
      781 cggaatcgtg aagcagagcg acggctacat ccgcgtgcag agcgcgccgg gggttggaac
      841 ctccattacc gtgtacctgc cggaaaccct catggaagaa tgtgaggcga gggaggaatc
      901 ccgtcgttcg gtgagcgtgg agttgaccgg aaaggaaacg atcctcctgg tcgaggacga
      961 ggaaatggtg cgggaacttg cggtcgaaag tctccagagg tacggctaca ccatcatgga
     1021 tgcgccgaac ggggacaggg cgctctcgat ctgtgagggc tacaatggaa cgatcgacct
     1081 gctgattacc gatgtcgtca tgcccggaat gaacgggatc gaattggcca ggaggttccg
     1141 cgattcccgc cccggggtcc cggtcctctt catgtccgga tacgccgagg gtgccgtgga
     1201 acatctcggc ggcattgccg atcggcagtc tttccttcag aagccgatca cgccgacgac
     1261 tctctcccgg aaggtgcggg agatgctctc ggaaccgatc ccggcctgac gatcctgccg
     1321 ggacagcggt atcctccgat ggacggtcac tcctgaagct gcaggtgctc ctttcgggcg
     1381 gacccgacca ccaccgtgac gcgcgtcccg accttcagtt tcccttccag gttccggaac
     1441 aatacgttgt gcacaccttt ttcccccgga acggggaact ccgccagccg gccgatgcgc
     1501 tgcaagcgaa cgatggggaa cttctctccc gtggattcgt ccacaaggta ggcttccatc
     1561 gtcatgggat cgaatttttc gacaccgatc aggcgcaaac ggacgccgac gtattcccct
     1621 ttggacatca gcctgcactg gacgacgtcc agttcgggag gaggcgggcg caacgctcct
     1681 ttcccggaac aggatgcaag gaggcaaagc gtaaccgcgc aaaggatggg cttttggaac
     1741 gggagaaaaa gcgaacggga gggatacggt gggcaggtca tgttgccggg tccccgctgg
     1801 gttccccgac ggggtagtcg acggtatccg atccggtgcc aacagggatg tccgtcgctg
     1861 tcggagtttc cagatccgca tccgtaccct ttgcgatccc gccatccagg ccgacggaag
     1921 ccgcaagcag gatccggttt cttccctggc gcttcgattc gtacaaggca tcgtcggccg
     1981 cccggaacag ttcggtggtg gactgcccgt gggtggggaa catcgcaagg ccaccgctga
     2041 cggtgatccg cacggggact tccgtccccg ggatcgcgat gtcggtcgcg gaaatcttct
     2101 cccgtaattt ttccgagaaa gagatcgcct gcttctcggt cgtcgacgtg atgaggacga
     2161 tgaactcgtc accgccgtag cggcccacga ggtcgccccc ccgggtggtt ttcttgacga
     2221 tttcggccat tttcttgatg acgacgtctc cggcatggtg cccgtgcgtg tcgttgatcc
     2281 tcttgaatcc gtcgatgtcg aacatgaaca gcgccagggt ctgtcgatag ttccccgtgc
     2341 gtcggatctc gctttcgaac cgttgctgga aatagagccg gttcgccacg ccggtgaggt
     2401 gatccaccca cgtggcgtac cgattcgaat cgaggagcgc ggcattctga agcatggtgg
     2461 ataactggtc cgcgaacatc gaaacgtaga ctctctcccc ctcgagggag aaggggcaac
     2521 ccgcgatcac aagcgctccg acggtaccgg agattccgaa cacgggcgcg acgaaatcgg
     2581 gcgccacacc catattctca agagagcaaa gggaagatct ccggccggaa gaggaatgcg
     2641 ggtccaccct cgagacgaca actcttttct ggagcgccat gcccaggatc ccctcgccgg
     2701 ggtggatccg taccttgtcc agccaatcgg aagggaaccc tgttccgaca acgagggagt
     2761 agtcggagga tcccgcctcc ggagcgaagt atccgacttt tttggcgtgg aagaaatcca
     2821 tcatggaacg aaccgctatg gccgggtatg cgtccgaagg aagtttttcc gtcatcttct
     2881 tggtgatttg tggaagtttt tctgcgattt cactctttcg ggcaagctcc tttttcaggt
     2941 ttttcagctc cgcggaatac gccgaaagct gttgctgttt ctggcggctt cgcacggatt
     3001 ccctgcttac tttccgcctg cggatcgcgt attcgacgat caggacggcg gtgaggaata
     3061 gcagcgttgc cttggcgacg atgaaagggt aggagtccat tagtagtcaa tatcggcata
     3121 tctccatgtt ttatttaacg ggaactggac aggatgacct gttcccc
//
LOCUS       DATGYW010000560         1804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_195518, whole genome shotgun sequence.
ACCESSION   DATGYW010000560 DATGYW010000000
VERSION     DATGYW010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195518"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1041
                     /locus_tag="VK429_07835"
     CDS             <1..1041
                     /locus_tag="VK429_07835"
                     /inference="COORDINATES: protein motif:HMM:NF013909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HLN91752.1"
                     /translation="EAPVRSVLIALDATPAVIARLRRRPSDLLVTHHPVVFTPLKSVR
                     PDPGPSATAFALLRMGVAVISAHTNADAAPRGVSHAMGRRLRLRGMRPLIPGEPSSGA
                     CKIVAFVPPSHAEAVLAAAAEAGGGRIGAYSRCSFRAPGTGTFLGGRGSSPRMGTPGV
                     EERVEEVRLETVAPGSRVRAVLCAVRKAHPYEEPAIDVVPLREGVLGGGIGIIGELPE
                     PLPLDRALDTVRRALRPSWIHVAGPRRKTVRRVAIVGGGGAEFSFAAREAGADLFVTG
                     DVKYHQALDAAAGDMPVADIGHASGERWILPEFRRVISARFPGAVSARVIMEEEPLRA
                     VPAGRRRGGEKP"
     gene            1041..1766
                     /locus_tag="VK429_07840"
     CDS             1041..1766
                     /locus_tag="VK429_07840"
                     /inference="COORDINATES: protein motif:HMM:NF014630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc ribbon domain-containing protein"
                     /protein_id="HLN91753.1"
                     /translation="MEQVRILIDLQEVMGQARRLDEEKQKIPLEVADLKSLFEEREAS
                     FLAVEQEFESLKQQRREKEREIEEERDKVERAKAKLMSIKTNKEYYAMLKEIEGTRRT
                     NVAREEELLSLLVRYEEVEKRLAERKADLDEVSGRYRERMVDIDARMGTFDDDIGKLD
                     ARRRQVANKLDPSLVRRFEMIFERRDGLAIVAARNYSCMGCHMNIAPQLFNLLQREDR
                     IHTCPNCNRVVYYDATEIEAAAE"
BASE COUNT          298 a          568 c          670 g          268 t
ORIGIN      
        1 gaagcccccg tgcggtcggt cctcatcgcg ctcgacgcca cgcccgcggt gatcgcgcgc
       61 cttcgccggc gcccctccga cctgctggtc acgcaccacc ccgtcgtctt cacccccctg
      121 aaatccgtcc gtccggaccc cggaccctcc gcgaccgcgt tcgccctgct gcggatgggc
      181 gtcgcagtca tctccgcgca caccaacgcc gatgcggccc cccggggcgt ttcgcacgcg
      241 atggggcgcc gtctgcggtt gcgcgggatg cgtccgctga tccccggtga accgtcctcc
      301 ggcgcatgca aaatcgtggc gttcgttccg ccgtcccacg cggaagccgt cctcgccgcc
      361 gccgcggagg cgggcggggg gaggatcggc gcgtattccc gctgctcctt ccgggccccg
      421 gggaccggaa cgttcctcgg gggacggggt tcctctccgc gcatgggaac gccgggagtc
      481 gaagagcgcg tggaggaggt ccggctcgag acggtcgcgc cggggagccg ggtgcgggcg
      541 gtgctgtgtg cggtgcggaa ggcgcacccg tacgaggagc cggcgatcga cgtcgtgccg
      601 ttgcgcgaag gagtcctcgg aggcgggatc gggatcatcg gcgagttgcc cgaaccgctg
      661 ccgctcgacc gggccctcga tacggtgcgc cgcgctctgc ggccctcctg gatccacgtc
      721 gccggtcccc gccggaagac ggtgcgccgt gtcgcgatcg tcgggggagg cggggccgag
      781 ttctccttcg cggcgcgcga agccggagcg gatctcttcg tcacggggga tgtgaagtac
      841 caccaggcgc tcgacgcggc ggcgggggac atgcccgttg ccgatatcgg gcacgcttcg
      901 ggggaacggt ggatcctgcc ggaattccgg cgggtcatca gtgcgcggtt tccgggggcc
      961 gtgtcggccc gtgtcatcat ggaggaagag cctttgcggg cggtgcccgc ggggcgaaga
     1021 aggggagggg agaagccttg atggagcaag tgaggatcct gatcgatctg caggaggtca
     1081 tgggacaggc tcggcggctc gacgaggaga agcagaagat cccgctcgag gtggcggacc
     1141 tgaagagcct cttcgaagag cgcgaggcgt cgtttctggc ggtggaacag gagttcgagt
     1201 cgctcaagca gcagcgccgc gagaaagagc gggagatcga agaggagcgg gacaaggtcg
     1261 aacgggcgaa ggcgaagctg atgtcgatca agacgaacaa ggaatattac gccatgctca
     1321 aggagatcga ggggacccgg cggacgaacg tggcccgcga agaggaactt ctctccctcc
     1381 tggtgcgcta cgaggaagtg gagaagaggc tcgcggagcg gaaggccgac ctcgacgagg
     1441 tgtcggggag gtaccgggag cggatggtcg acatcgacgc ccggatggga accttcgacg
     1501 acgacatcgg gaagctggat gcgcgcaggc gccaggtggc gaacaaactg gatccatccc
     1561 tcgtgcgccg cttcgagatg atcttcgaac ggcgggacgg cctggcgatc gtggcggcga
     1621 ggaactactc ctgcatgggg tgccacatga acatcgcccc gcagctgttc aaccttctgc
     1681 agcgggagga ccggatccac acctgcccca actgcaaccg tgtcgtttac tacgatgcga
     1741 cggagatcga ggcggccgcc gagtgacccc cgtcgacgtc accgtgcgca tcgatggcgc
     1801 cagc
//
LOCUS       DATGYW010000561         1565 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_195642, whole genome shotgun sequence.
ACCESSION   DATGYW010000561 DATGYW010000000
VERSION     DATGYW010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195642"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..667
                     /locus_tag="VK429_07845"
     CDS             <1..667
                     /locus_tag="VK429_07845"
                     /inference="COORDINATES: protein motif:HMM:NF025121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HLN91754.1"
                     /translation="LAQWGVIFTMVAVVGPRFCKTACPYAVLQNVLADRETLAVAYDP
                     ARAECLRCDRCTRVCPVGIDIRKGGQRECIACAACIDACREVTSPRNVAPFIAYRGTI
                     LRGKAYLFAGGCAAAAFVLLAAIGSRPDVRFAVQWEGSAATPGANSYRYSVQNDSDRP
                     VALALSVEGPARLLDDPKVAVPSRGRVTGTVTVKGGDGTPGQILITAAGPGFRIVRKA
                     AFP"
     gene            664..1095
                     /locus_tag="VK429_07850"
     CDS             664..1095
                     /locus_tag="VK429_07850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91755.1"
                     /translation="MKRMIGGLFAAFALLIGATIYISYRSWDGLVDRRSSGTEGVLRG
                     AAAGQEVLLAITPWPPRAMREVDFAVSLPGYAGTAPPYVDLSMAGMEMGRNRVDLSLG
                     ADGRYRGTGVFVRCPSGRHDWEATVTAPGAGKAVFHVAVAD"
     gene            1076..>1565
                     /locus_tag="VK429_07855"
     CDS             1076..>1565
                     /locus_tag="VK429_07855"
                     /inference="COORDINATES: protein motif:HMM:NF024778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HLN91756.1"
                     /translation="MLPWPTDSLPWVLFVTGLVGGAGHCVGMCGPLVAGYAITLRNRA
                     ATLPHLLFHLGRVTTYGIAGGIVGASGSFVRVAAWVAPLQSFLLAATGVLIALMGLSV
                     GGWLPWAGRIEGSGTFQGALAGVARRAAEAGGPGAAFPLGMATGLLPCGLVYTALLSA
                     ARS"
BASE COUNT          185 a          544 c          580 g          256 t
ORIGIN      
        1 cctggcgcag tggggggtga tcttcaccat ggtggccgtc gtggggcccc ggttctgcaa
       61 gacggcgtgt ccatacgcgg tgctccagaa cgtcctcgcc gaccgggaaa cgctcgcggt
      121 cgcctacgac ccggcgcggg cagaatgcct ccggtgcgac cgatgcaccc gggtctgccc
      181 cgtggggatc gacatccgga agggaggaca gcgggagtgc atcgcctgcg cggcgtgcat
      241 cgacgcctgc cgggaggtga catcgccccg caacgtcgcg cccttcatcg cctaccgggg
      301 gacgatcctg cgcgggaaag cgtacctgtt cgcgggcgga tgcgccgcgg ccgcgttcgt
      361 cctcctcgcc gcgatcggga gtcgtcccga cgtccggttc gccgtccagt gggaagggag
      421 cgcggcgaca cccggcgcga actcctaccg gtactcggtg caaaacgact cggaccggcc
      481 ggtcgccctc gcactctccg tcgaggggcc ggcgcgtctc ctcgacgatc cgaaggtcgc
      541 agtgccctcc cgggggcgcg tcaccggcac agtgaccgtg aagggcgggg acgggacgcc
      601 ggggcagatc ctgatcaccg ccgcggggcc ggggttccgc atcgtccgga aggcggcgtt
      661 cccgtgaaac ggatgatcgg gggtctgttc gccgccttcg cgctcctgat cggcgcgacg
      721 atctatatct cgtatcgttc ctgggacggc ctcgtcgatc gccgctcttc cggaacggag
      781 ggcgtcctgc gtggcgccgc cgccggacag gaggtcctcc tcgcgatcac cccatggccg
      841 ccaagagcga tgcgggaggt cgatttcgcc gtatcccttc cggggtacgc agggacggcc
      901 ccgccgtacg tcgacctgtc gatggcgggg atggagatgg gacggaaccg cgtcgatctc
      961 tccctcgggg ccgacggtcg ataccgcggc acgggggtgt tcgtccggtg cccgagcgga
     1021 cggcacgact gggaagcgac ggtgacggcg ccgggcgccg ggaaggcggt gttccatgtt
     1081 gccgtggccg actgactccc tcccgtgggt cctgttcgtc accggtctgg tgggcggcgc
     1141 cggccattgc gtcgggatgt gcggaccgct cgtcgccggg tacgccatca cgctgcggaa
     1201 tcgcgcggct acccttcccc atctcctttt ccacctgggc cgggtgacca cgtacggcat
     1261 cgcgggcggc atcgtcgggg cgtcgggctc ctttgtccgc gtcgcggcgt gggtcgcccc
     1321 cctccagtcg ttcctcctcg ccgcgaccgg cgtgctgatc gcgttgatgg ggctttcggt
     1381 cggcggctgg ctgccgtggg cgggacggat cgaggggagc ggcactttcc agggcgccct
     1441 ggccggggtc gcgcgacgcg cggcagaagc gggcggcccg ggcgccgcct tccccctcgg
     1501 gatggcgacg gggctcctgc cgtgcgggct ggtctacacc gctctcctct cggccgcgcg
     1561 ctccg
//
LOCUS       DATGYW010000562         3913 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_195695, whole genome shotgun sequence.
ACCESSION   DATGYW010000562 DATGYW010000000
VERSION     DATGYW010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3913)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3913)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3913
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195695"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1060
                     /locus_tag="VK429_07860"
     CDS             <1..1060
                     /locus_tag="VK429_07860"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HD domain-containing phosphohydrolase"
                     /protein_id="HLN91757.1"
                     /translation="LAQLCATGSQPGDMTGIFETCLNTLLSMAGLQAGVLFIVSPGGK
                     TMKVRVLTGLPEALKGAVIPLDHGVAGWVASHGQMVTVSESVPWKRGELSEVEKCMSC
                     SLHVPMTATGRTRGVISIGLREGQKEIPADDILTIRSLANQVAVALENAELKRKEERS
                     YIETVAALAAAVEARDRYTRGHSRRVTEFSVAIARNMGKPEWFVKDLESAALLHDIGK
                     IGFSDTILCDSAPISPDSLPLIRNHPIMGENILKPVGSLARLCTIVRHHHEKFDGSGY
                     PDRLKGEEIPLAARMITVADSFDAMISERPYKPSRKREDAMAELVHCSGTQFDPTCVE
                     VFLGYLGSNSQAGVFLPT"
     gene            1302..1796
                     /locus_tag="VK429_07865"
     CDS             1302..1796
                     /locus_tag="VK429_07865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="diheme cytochrome c-553"
                     /protein_id="HLN91758.1"
                     /translation="MKATASKPVSATIARGKYLITLGGCHDCHTPKLMTGKGPALDTK
                     RLLSGFPSSQKVPAIPEGVIGPNSWGGLCTNDLTGWAGPWGVSFASNLTPDKETGIGA
                     WTEKSFINVLRAGKTPGGRPILPPMPWESTQQASDEDLKAMFAYLMSLPPVRNMVPAP
                     VPPK"
     gene            1857..2078
                     /locus_tag="VK429_07870"
     CDS             1857..2078
                     /locus_tag="VK429_07870"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HLN91759.1"
                     /translation="MGLSDDFKPVSSWTVEEVRTFLGEGSAESYNLVDVRQPGEYESG
                     HLPGARLIPIAELTERLGELDRSQPTIAY"
     gene            2244..2693
                     /locus_tag="VK429_07875"
     CDS             2244..2693
                     /locus_tag="VK429_07875"
                     /inference="COORDINATES: protein motif:HMM:NF014912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HLN91760.1"
                     /translation="MISLSFALEEGNRVFYDRISQEVKEEEAASIFRLLGQSEERHKE
                     TLRELHARVSGKGGDPAHPEEMAAGRFLEGGAPLGETLEWAKGKTLEEILELAIAMEA
                     NALDRYIKMGRAVADDLSREVFLALSREEQIHLERMTSLLDRSRGKG"
     gene            complement(2748..3329)
                     /locus_tag="VK429_07880"
     CDS             complement(2748..3329)
                     /locus_tag="VK429_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014434315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/DsrF/DrsH-like family protein"
                     /protein_id="HLN91761.1"
                     /translation="MDASARVRLVADPSPMPTLEEKLQDLEKRLTQVEGQVAEDRVAL
                     VVFSGDLDRVLASFIIATGAAAMGQQVSMFFTFWGLSVLKKDRQFPGKTLFQKMMALM
                     SPGSSKSLPVSKMNYFGVGAKMLRSMMKKKNVSSLEEMISLARELGVRMIACEMSRDV
                     MGIKEAELVDGLECGGVASFLADALKSRTSLFI"
     gene            complement(3342..3593)
                     /locus_tag="VK429_07885"
     CDS             complement(3342..3593)
                     /locus_tag="VK429_07885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005576254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HLN91762.1"
                     /translation="MSQAFDKLLDARGLNCPMPLVNARKEIGKLELGQVLKVVATDRG
                     SIADFQGWAKVAKNVELLGQETESTDGADVYVHYVKRAA"
     gene            complement(3590..>3913)
                     /locus_tag="VK429_07890"
     CDS             complement(3590..>3913)
                     /locus_tag="VK429_07890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91763.1"
                     /translation="GLPGGTTVLPGHFSGLDEADETGRFAASLDDLKRRNDGLVVLQR
                     ESEEGFVRYLLESLPKFIPEYVDIKRVNAGLLAPAEEEAATLELGKNVCALSQAYEAS
                     GGGRR"
BASE COUNT          772 a         1206 c         1205 g          730 t
ORIGIN      
        1 tctggcgcag ctatgcgcca ccggcagcca gcccggcgac atgacaggca tattcgagac
       61 ctgcctgaac accctcctgt ccatggccgg gctgcaggcc ggagtccttt tcatcgtctc
      121 ccccggcggg aagacgatga aagtgcgggt cttgaccggc ctgcccgagg cgctgaaggg
      181 cgccgtgatc cccttggacc acggggtagc gggatgggtc gcatcccacg gacaaatggt
      241 gaccgtctcg gaatcggtgc cgtggaagag gggggagctt tcagaggtcg aaaaatgcat
      301 gtcctgctcc ctccacgtcc ccatgaccgc cacgggcagg acacggggcg tcatcagcat
      361 cggccttagg gaggggcaga aggagatccc ggccgacgac attctgacga tccggagcct
      421 ggccaaccag gtcgcggtcg ccctggaaaa cgcggaactg aagcgcaagg aggagaggag
      481 ctatatcgag acggtcgccg cgctggcggc ggctgtggag gcgcgcgaca ggtacacacg
      541 gggccactca cggagagtga cggagttctc cgtggcgatt gcccggaaca tgggcaagcc
      601 cgaatggttc gtgaaagacc ttgaatcggc agcccttctc cacgacatcg gtaagatcgg
      661 attctcggat actatcctct gcgattcggc gccgatctcc cctgatagtc tgcccttgat
      721 caggaaccat cccatcatgg gggagaacat cctgaaaccg gtcggatccc tcgcccgtct
      781 ctgcaccatc gtccggcacc accatgaaaa gttcgatggg agcgggtatc ccgacaggct
      841 gaaaggcgag gagatcccct tggccgcccg catgatcacg gtcgccgaca gtttcgacgc
      901 gatgatatcg gaacgcccct acaagccgtc caggaaacgg gaagatgcca tggcggaact
      961 ggtccactgc agcgggacgc agtttgatcc gacctgcgtg gaagtgttcc tcggctacct
     1021 gggaagcaac tcccaagcgg gggttttcct ccccacctga ttcccggcgt gaaattgctt
     1081 cccctcacgt aatccttcat cccctggaag tcgaggacca tggatgtatc ccctcagcat
     1141 gttttatttt gacatacaca ccccttatcg gacaccatga tgctgcaggc ggatgaacat
     1201 cgagaggagg ggcggagatg aacacgctgc ggaattttct cgttgtcccg gtgttggcat
     1261 gttgtttcgt tgcgagctca ctggctgcgg agactcctgt ggtgaaggca actgcgtcga
     1321 agcccgtttc ggccaccatt gcacgcggaa aatatctgat caccctcgga gggtgccacg
     1381 actgtcacac gccgaaactc atgaccggga aaggtcccgc gctggacacg aagcggcttc
     1441 tttcgggatt cccttcttcg cagaaggttc ccgcgatccc ggagggcgtc atcgggccga
     1501 actcctgggg cggtttgtgc accaacgacc tgaccgggtg ggccggtccc tggggggtca
     1561 gcttcgcgtc gaacctcacc cccgacaagg aaaccggaat cggcgcgtgg acggaaaaat
     1621 cgttcatcaa tgtccttcgg gcgggaaaga cacccggtgg tcgccccatc ttgccgccga
     1681 tgccctggga gagcacccag caggcgagcg acgaggacct gaaagccatg ttcgcctatc
     1741 tcatgtccct tccccccgtc cgcaacatgg tgccggcccc ggtccctccg aaataggcga
     1801 cggggaaggc gggaagcggg gggagtgatc gaaacgggag gaagggaggg cctgtcttgg
     1861 gattgtccga cgatttcaaa cccgtttcca gctggacggt cgaggaagtc cgcaccttcc
     1921 tcggggaagg aagcgccgaa tcatacaatc tcgtcgatgt tcggcagccg ggggagtacg
     1981 agagcgggca tcttccggga gcccggctca tcccgatcgc ggaactcacg gaacgcctcg
     2041 gtgagctcga ccggtcccag ccgaccatcg cctattgaag gagcggggtc cgcagccgtg
     2101 ccgctgcggc tacgcttgcg ggggccggct tctcgcaggt tcacagcatg gagggaggga
     2161 tcaacgcctg gaacggcctt gtggcggagg gggtttacga aaaaggcctt gcgtatttcc
     2221 ctcatacggc acgagccgaa gaaatgattt cgctttcctt tgctctcgaa gagggaaatc
     2281 gcgtcttcta cgaccgcatt tcccaggaag taaaggagga ggaagccgcc tcgatcttcc
     2341 ggttgctggg tcagtcggag gagcggcaca aggaaaccct ccgggaactt cacgcccggg
     2401 tctccgggaa gggcggggac cccgcgcacc cggaagagat ggcggccgga agatttctgg
     2461 agggcggggc tccgctcgga gagacgcttg agtgggccaa gggaaagacg ctggaggaga
     2521 ttctcgagct cgccatcgcg atggaggcga acgccttgga ccgctacatc aagatgggga
     2581 gggcggtcgc ggacgacctg tccagagagg tcttcctggc gctctcccgg gaagaacaga
     2641 tacacctgga gcggatgacc tccctgctgg accggtcgcg gggcaagggg taaccgatgc
     2701 cggttttctc gggggcgatt gccgggacat aaaattcggg caaccgctca aatgaaaagg
     2761 ctcgtccgcg acttcaacgc atcggcaagg aagctggcga ctccgccgca ctccaggccg
     2821 tcgacgagtt ctgcctcctt aatccccatg acatcccgag acatctcgca ggcgatcatt
     2881 cgcactccca gttcccgcgc gagggagatc atctcctcga gcgaacttac gttctttttc
     2941 ttcatcatgg accgcagcat cttcgcgcca acgccgaagt agttcatctt cgagaccggg
     3001 aggctcttgc tcgatcctgg agacatcagg gccatcattt tttgaaagag ggttttcccg
     3061 ggaaactggc gatccttctt gaggacgctc aacccccaga aggtaaagaa catgctcacc
     3121 tgctggccca tggcggcggc gccggttgca ataatgaatg atgcgaggac gcggtccaga
     3181 tcgcctgaga agacgacgag cgcgacgcgg tcctccgcca cctgcccctc aacctgcgta
     3241 agtcgcttct ccagatcctg gagcttttcc tcgagtgtcg gcatcgggga cgggtcggcg
     3301 acgagtctta ctctggcact ggcgtccata gtgcttcctc ctcacgccgc ccgcttcacg
     3361 tagtgaacgt acacgtcggc gccgtctgtg gactctgtct cctggccgag caactccaca
     3421 ttctttgcga ccttcgccca gccctgaaag tccgcgatcg agccacggtc tgtggccacc
     3481 accttgagca cctggccaag ttcgagcttc ccgatctcct ttctggcgtt gaccagaggc
     3541 atcgggcagt tgaggccgcg cgcgtcgagc agcttgtcga atgcctggct catcgtcttc
     3601 ctcctccgga agcctcgtat gcctgcgaaa gcgcacaaac gttcttgccc aactccagcg
     3661 ttgccgcctc ttcctccgcg ggcgcaagca atcccgcatt gacgcgcttg atatccacgt
     3721 actcggggat gaacttgggg aggctctcga gcaggtagcg gacgaaacct tcctcgctct
     3781 cccgctggag cacgacaagg ccgtcattcc gcctcttcag atcatcaagc gacgcggcga
     3841 agcgtcccgt ctcgtccgcc tcgtcaaggc cgctgaagtg tccaggcagc acagtggtcc
     3901 ctcccgggag acc
//
LOCUS       DATGYW010000563         1998 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_319851, whole genome shotgun sequence.
ACCESSION   DATGYW010000563 DATGYW010000000
VERSION     DATGYW010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319851"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1016)
                     /gene="arsB"
                     /locus_tag="VK429_07895"
     CDS             complement(<1..1016)
                     /gene="arsB"
                     /locus_tag="VK429_07895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010036986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008490 - arsenite secondary active
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACR3 family arsenite efflux transporter"
                     /protein_id="HLN91764.1"
                     /translation="MSGSRSAHSGEPPIPKRLNVFERYLTLWVAICMGVGIFAGKMFP
                     AVVDALRRMEFGKESQINIPIAVLIWLMIYPMMLKVDFTSILGVRKRPKGLIVTLVVN
                     WLVKPFSMALFGYIFFKHLFLPWIGPELADQYLAGTIILAAAPCTAMVFVWSYLTDGD
                     PAYTLVQVSVNDLIMLVLFAPIVKFLISGASSLTVPFMVLVYAVLFFIVIPLAAGVVS
                     RTLLIRSMGSEGFERFLSFLHPVTVVALLATLVCIFAFQADNITARSFHILLIAVPIL
                     IQVYFNSSLAYGLMKWLNVPHSVAAPGALIGASNFFELAVATAIALYGPGSGAALATV
                     VGVLV"
     gene            complement(1013..1240)
                     /locus_tag="VK429_07900"
     CDS             complement(1013..1240)
                     /locus_tag="VK429_07900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91765.1"
                     /translation="MKAKEFAVQFKALSREDQMAVLRQIMPGFCESMMGDPKRIREMF
                     SLMTEDCGEPMANMISVMGMMMGRKGGGCCG"
     gene            complement(1237..>1998)
                     /locus_tag="VK429_07905"
     CDS             complement(1237..>1998)
                     /locus_tag="VK429_07905"
                     /inference="COORDINATES: protein motif:HMM:NF014433.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsA family ATPase"
                     /protein_id="HLN91766.1"
                     /translation="EVSSEVRPVPGYPGLFAVRIDQKESVKAYKAKILSQAAASGHTD
                     EMLAVVREELESPCTEEMAVFEEFSGLVERDDFDVVILDTAPTGHTLRLLELPYDYAR
                     QVEMMVAVRKDDAGATGAKGKLDALVRRLKDPRATTFLLVIYPEYTPIFEAKRAAEDL
                     KESGIEVQGVIANFLLEEDDCSSPFSMSRYLMQQHYLKVAEETFRLPIFKVPMLPSEP
                     AGKDALDRVGRELLGMENIALAVPETAAAIEGGAK"
BASE COUNT          393 a          648 c          607 g          350 t
ORIGIN      
        1 accaggaccc cgaccacggt ggccagcgcc gcgccggatc cggggccgta aagggcgatc
       61 gccgtggcca cggccagctc gaagaagttg gaggccccga tgagcgcgcc tggagccgct
      121 acgctgtgcg gaacgttcag ccacttcatc aacccgtagg cgagcgacga gttgaagtag
      181 acctggatca ggatcgggac ggcgatcagg aggatgtgga acgaccgggc ggtgatgttg
      241 tcggcctgga acgcaaagat gcacaccagg gtggccagca gtgcgacgac cgtcacggga
      301 tgcaggaatg ataagaacct ctcgaatcct tcgctcccca tggagcggat cagcaaggtt
      361 ctggatacga ccccggccgc cagggggatg acgatgaaga agaggaccgc gtagacgagc
      421 accatgaacg gcaccgtcag cgaggacgcg ccgctgatca ggaacttcac gatcggtgcg
      481 aacaggacga gcatgatcag gtcgttcacg gagacctgga ccagggtgta cgccggatcc
      541 ccgtccgtca ggtagctcca gacgaagacc atcgccgtgc acggagcggc cgcgaggatg
      601 atggtccctg cgagatactg gtccgccagt tccggcccga tccatggaag gaacaggtgc
      661 ttgaaaaaga tgtatccgaa gagtgccatc gaaaacggct tcaccagcca gttgacgacg
      721 agggtgacga tcaggccctt tgggcgtttc cggaccccca ggatcgaggt gaagtccacc
      781 ttgagcatca tcgggtagat catcagccag atcagcaccg cgatcggaat attgatctgg
      841 ctctccttgc cgaactccat ccttcgcagg gcatcgacca cggcggggaa catcttcccg
      901 gcgaagatgc cgactcccat gcagatcgcg acccagaggg tcaggtaccg ctcgaagacg
      961 ttcagccgct tcgggatcgg cggttccccc gaatgcgcgg aacgggaacc gctcatccgc
     1021 agcagccccc gcccttgcgc cccatcatca tccccatcac ggagatcatg ttcgccatcg
     1081 gctcgccgca atcctccgtc atcagcgaaa acatctcccg gatccgcttc gggtcgccca
     1141 tcatgctctc gcagaacccc ggcatgatct gccggaggac ggccatctgg tcttccctgg
     1201 aaagcgcctt gaactgcacc gcgaactctt tcgccttcat tttgcccctc cttcgattgc
     1261 cgccgccgtt tccggaacgg cgagtgcgat gttttccatc ccgagcaact ccctgcccac
     1321 ccggtccagc gcatccttgc ccgcgggctc cgacggcagc atcggcacct tgaagatcgg
     1381 cagacggaat gtctcctccg ccaccttgag atagtgctgc tgcatgaggt accgcgacat
     1441 ggagaacgga gacgaacagt cgtcctcttc gagcaggaaa ttggcgatga cgccctgcac
     1501 ctcgatgccg gactccttga ggtcttccgc ggcccgtttc gcctcgaaga tcggggtgta
     1561 ttccgggtag atcacgagga ggaaggtcgt tgcccgtgga tccttcaacc gccggacgag
     1621 cgcatcgagc ttccccttgg cgccggtcgc ccccgcgtcg tccttgcgga cggccaccat
     1681 catctcgact tgcctggcgt agtcgtacgg cagttcgagg agccgcaagg tgtgtcccgt
     1741 gggggcggtg tcgaggatta ctacatcgaa atcgtcccgc tccacgaggc cggagaactc
     1801 ctcgaagacc gccatctcct ccgtgcaggg ggattccagc tcctcccgga ccacggcgag
     1861 catctcgtcg gtgtggccgg acgcggccgc ctgggagagg atcttcgcct tgtacgcctt
     1921 gacgctctcc ttctggtcga tccgcaccgc gaacagcccg gggtatccag gtacgggacg
     1981 cacctcgctc gagacttc
//
LOCUS       DATGYW010000564         2893 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_88772, whole genome shotgun sequence.
ACCESSION   DATGYW010000564 DATGYW010000000
VERSION     DATGYW010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2893
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88772"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..656)
                     /locus_tag="VK429_07910"
     CDS             complement(<1..656)
                     /locus_tag="VK429_07910"
                     /inference="COORDINATES: protein motif:HMM:NF013765.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91767.1"
                     /translation="MALPLTPAMRQYVEIKSRYRDCILFFRMGDFYEMFFEDALRASR
                     LLDIALTSRDKESNIPMCGVPHHARNAYLTKLIRQGCKVAICEQIEEPGQKGIFRREV
                     TEVVTPGLVFSEECLDARGNNFLAAVRFVAPFACAALDATTGEFFHEACDTEEALADA
                     LFRIAPAEFVALEGEGNPTTSRGKRLLEGKLLTLLSPSAVAAFPAPPGIEGIPPLDHP
                     S"
     gene            complement(679..1179)
                     /locus_tag="VK429_07915"
     CDS             complement(679..1179)
                     /locus_tag="VK429_07915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012647953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HLN91768.1"
                     /translation="MDRIFSPWRMEYIRQAGGGGGTASCVFCVGGGDLEDPERLLVGL
                     YPATVAILNRYPYNNGHVLIAPRRHVANLWDLSGEELRELFSVVSLGSRELAMEYRTE
                     GMNVGMNLGKAAGAGIADHLHVHLVPRWAGDTNFMTPVQETRVLPESLLESRRRLSAV
                     FGSLTP"
     gene            complement(1190..1468)
                     /locus_tag="VK429_07920"
     CDS             complement(1190..1468)
                     /locus_tag="VK429_07920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013247031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HLN91769.1"
                     /translation="MTKSDLVEKLSESLNNLTKKECEVIVDTVFHNMKDALHRGEKIE
                     IRGFGSFTVRTRRAKEGRNPKTGEKVAIPEKRIPFFKVGKELREMVNG"
     gene            complement(1491..2390)
                     /gene="sppA"
                     /locus_tag="VK429_07925"
     CDS             complement(1491..2390)
                     /gene="sppA"
                     /locus_tag="VK429_07925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015743932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HLN91770.1"
                     /translation="MAEPYLSAPPRRKPFLRGCLTVLLVLGAFFVLLLIISRMDDLPL
                     ARGEKVAVISVSGLISESEPTIEQLKKFGKDDSVKAIVLRIDSPGGGVGPSQEIYEEV
                     KKARAKKPVLASMGALAASGGYYIACATQRVYANPGTITGSIGVVMPFMNVKDLVEKI
                     GVKGMTVKSGVFKDIGSPMRDMTPQERDLLQGVVDNVHLQFVNAVAAGRNLNREDVLR
                     IADGRIFTGEQARGLGLVDVLGNLEDAVSDAGKLGKITGEPKVVTFPKKKISFLELLR
                     EEMRTLIDEKISGNHLRLDFLAQ"
     gene            complement(2397..>2893)
                     /locus_tag="VK429_07930"
     CDS             complement(2397..>2893)
                     /locus_tag="VK429_07930"
                     /inference="COORDINATES: protein motif:HMM:NF044856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HLN91771.1"
                     /translation="VKNPSELFKKGDHVRAKVLKIDPDAQKFSLGIKQLGEDPWAGVE
                     KRFRKGDIVTGKVTRVADFGAFVEIADGVEGLVHVSEISREKIESPAAVLKVGDEVGA
                     VVLGVDRSNKKVSLSIRGHADELDRKNMESYLGKQAEAPNENIGALGEALLAKFKANG
                     EQNH"
BASE COUNT          469 a          972 c          922 g          530 t
ORIGIN      
        1 gacgggtggt ccaggggagg gatcccctcg atcccgggcg gggccggaaa cgcggcgacg
       61 gccgacgggg agagcagcgt gagcagcttc ccctcgagaa gacgcttccc ccgggaggtg
      121 gtcgggttcc cctccccctc gagcgcgacg aactccgcgg gcgcgatccg gaacagggcg
      181 tccgcgagcg cctcctcggt gtcgcacgcc tcgtggaaaa attcgccggt ggtggcgtcg
      241 agcgctgcgc aggcgaacgg ggcgacgaac cggacggcgg ccaggaagtt gtttccccgg
      301 gcgtcgaggc actcctcgct gaagaccagc cccggggtga cgacctcggt cacctcccgg
      361 cggaagatcc ccttctggcc gggctcctcg atctgctcgc agatggccac cttgcacccc
      421 tgccggatca gcttcgtcag gtacgcgttc cgcgcgtggt gcggcacccc gcacatcggg
      481 atgttcgact ccttgtcgcg cgacgtcagg gcgatgtcga ggaggcggga ggcgcgcagg
      541 gcgtcctcga agaacatctc gtagaaatcg cccatgcgga agaagagaat gcagtcccga
      601 tagcgggatt tgatctccac gtactgccgc atcgcggggg tcagcggaag ggccatcggg
      661 gatccggaac gggcccggct acggggtcaa ggatccgaag accgccgaga ggcggcggcg
      721 ggattcgagg agcgattcgg gcaggacgcg ggtttcctgg accggggtca tgaaattcgt
      781 gtcgcccgcc cagcggggaa cgaggtggac gtggaggtgg tcggcgatcc cggcgccggc
      841 ggccttcccc aggttcatcc cgacattcat cccctcggtt cgatattcca tcgcaagctc
      901 ccgtgatcca agggaaacaa cggagaacaa ctcgcgaagt tcctcgcccg acaggtccca
      961 caggttcgcc acgtgtcgac ggggcgcgat tagcacatgc ccgttgttat aaggatagcg
     1021 gttcaggatc gccacggtgg ccgggtacag cccgacgagg agccgctcgg ggtcttcgag
     1081 gtcgccgccc ccgacacaga atacgcacga cgccgtcccc ccgcccccgc ccgcctggcg
     1141 gatgtattcc atccgccacg gggagaagat ccggtccacc gtgggtatct cagccgttga
     1201 ccatttcccg cagttccttg ccgaccttga agaaagggat ccgcttctcg gggatggcga
     1261 ccttctcgcc cgtcttcggg ttgcggccct ccttcgcccg ccgggtccgc acggtgaagc
     1321 tcccgaaccc gcggatctcg atcttttcgc cgcgatggag ggcgtccttc atgttgtgga
     1381 atacggtgtc gacgatgacc tcgcactctt tcttggtcag gttgttcagt gactcggaca
     1441 gcttctccac caggtcgctc ttcgtcatcc ccgtggttcc tccgaaaggt ttattgggca
     1501 agaaaatcca gcctcagatg atttccggaa atcttctcgt cgatcagggt gcgcatctcc
     1561 tcacggagca gttcgaggaa ggagatcttc ttcttcggga aggtcacgac cttcggctcg
     1621 ccggtgatct tcccgagctt ccccgcgtcg gagaccgcgt cctcgagatt cccgaggacg
     1681 tcgaccaggc ccagccccct ggcttgctcc ccggtgaaga tccgcccgtc ggcgatccgg
     1741 aggacatcct cccggttgag gttccggccg gccgccacgg cgttgacgaa ctgaaggtgg
     1801 acgttgtcga ccaccccctg gaggagatcc cgctcctggg gcgtcatgtc gcgcatcggg
     1861 gacccgatgt ccttgaagac gccgcttttc accgtcatcc ccttcacgcc gatcttctcc
     1921 acgaggtcct tcacgttcat gaacggcatg acgacgccga tggagccggt gatcgtcccg
     1981 gggttcgcgt acacccgctg ggtcgcgcag gcgatgtagt agccgccgga cgccgccagc
     2041 gcccccatgc tggcgaggac cggcttcttc gcccgcgcct tcttcacttc ctcgtagatc
     2101 tcctgggacg ggcccacccc gcccccgggg gagtcgatcc gaaggacgat cgccttgacc
     2161 gagtcgtcct tgccgaactt cttcagctgc tcgatggtcg gctcggattc ggagatgagg
     2221 ccggagaccg aaatgaccgc caccttttcc ccccgggcca gggggaggtc gtccatgcgc
     2281 gagatgatca gcaggaggac gaagaacgcc cccagcacca gcagcacggt gagacacccg
     2341 cgcaggaacg gtttccggcg cggaggcgcg gagaggtagg gttcagccat agggatttag
     2401 tggttctgct ctccgttggc cttgaacttg gccaggagcg cctcccccag ggccccgata
     2461 ttctcgttcg gggcctcggc ctgcttcccg aggtacgatt ccatgttctt ccgatcgagc
     2521 tcgtcggcgt gtccccggat gctgagggag accttcttgt tcgaccggtc cacaccgagg
     2581 acgaccgcgc ccacctcgtc gccgaccttg agcaccgccg cagggctttc gatcttctcc
     2641 cgggagatct cggagacgtg gaccagcccc tcgaccccgt cggcgatctc gacgaacgcc
     2701 ccgaagtcgg ccacgcgggt caccttcccc gtgacgatgt cgcccttcct gaaccgcttc
     2761 tcgacccccg cccacgggtc ctccccgagc tgcttgatgc cgagggagaa cttctgggca
     2821 tcggggtcga tcttgaggac cttggcacgg acgtggtccc ccttcttgaa cagctcggac
     2881 gggtttttca ccc
//
LOCUS       DATGYW010000565         2379 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_476668, whole genome shotgun sequence.
ACCESSION   DATGYW010000565 DATGYW010000000
VERSION     DATGYW010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_476668"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..816)
                     /gene="tsf"
                     /locus_tag="VK429_07935"
     CDS             complement(<1..816)
                     /gene="tsf"
                     /locus_tag="VK429_07935"
                     /inference="COORDINATES: protein motif:HMM:TIGR00116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HLN91772.1"
                     /translation="MQITSGMVKELREKTGAGLMDCKAALTASDGDMEAAIDHLRTKG
                     LAAAAKKSSRIASEGIVCAHVEGNSGTLVEVNCETDFVARTDSFIGLAKEVAALVNFK
                     APRDVDEALTLPLDGGNLGEKLVATVAKIGEKISFRRFARLETPAGAPGMIVPYIHAG
                     GKIGVLVAVSGADRSNAAVAALAKDLAMQVAAANPSYIGRNDVPAPVIEREKAIYREQ
                     AKASGKPDKILDRIADGKLEKYFGDFCLVEQAFIKDPDRKVSQLLADAGKAAGS"
     gene            complement(861..1703)
                     /gene="rpsB"
                     /locus_tag="VK429_07940"
     CDS             complement(861..1703)
                     /gene="rpsB"
                     /locus_tag="VK429_07940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011195621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HLN91773.1"
                     /translation="MANGQSSVISMKQLLEAGVHFGHQTKRWNPKMKRYIFTARNGIY
                     IIDLQQTVKMFRAAYEAVRSMAAEGKTVLFVGTKKQAQEAVEEEARRAGTPFVNQRWL
                     GGMLTNFATIRKSLDRLQKLSEIGTDGTAERLPKKEVLQLEKERVKLEKTLGGIRDLK
                     RVPDAMFVVDPSRETIAILEGRRLGIPIVAIVDTNCDPDLIDVVIPGNDDAIRAIKLF
                     LSKMADAILEGKAAYAEKNASRIDKEAEAPEVTVSLISTEGDEEVSIAPKGPATAQTP
                     ATAE"
     gene            complement(1840..>2379)
                     /locus_tag="VK429_07945"
     CDS             complement(1840..>2379)
                     /locus_tag="VK429_07945"
                     /inference="COORDINATES: protein motif:HMM:NF014065.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ornithine
                     acetyltransferase/N-acetylglutamate synthase"
                     /protein_id="HLN91774.1"
                     /translation="DGDTSTNDTAALFANGACGLPPLAGKGLAAFREALLSLLLELAL
                     MIVRDGEGATRVVRLSVTGARTAADAKKAARAAASSPLVKTAVYGADLNWGRVVAVLG
                     RAGIAVDPMKVSMRFAGETLLRRGMRPDPAASRRAVPKIRAEAYAIDVDLGLENGSDY
                     VYFSDLSVEYVKLNSGYRS"
BASE COUNT          329 a          858 c          745 g          447 t
ORIGIN      
        1 ggatccggcg gccttcccgg cgtccgcgag gagctgcgag accttccggt cggggtcctt
       61 gatgaacgcc tgctcgacga ggcagaaatc gccgaaatat ttctccagct tcccgtcggc
      121 gatcctgtcc aggatcttgt cgggttttcc cgaggccttg gcctgctcgc ggtagatcgc
      181 cttctcgcgc tcgatgaccg gtgcggggac gtcgttcctg ccgatgtacg acgggttggc
      241 ggccgccacc tgcatcgcga gatccttggc cagcgcggcc accgcggcgt tcgaccgatc
      301 cgcacccgat accgccacga ggacgccgat cttccccccg gcgtggatat acgggacgat
      361 catgccgggc gcccccgccg gcgtctcgag gcgcgcgaac cggcggaacg agatcttctc
      421 gccgatcttc gccaccgtgg ccaccagctt ttcgccgagg ttcccgccgt cgagcggcaa
      481 ggtcagggct tcgtcgacgt cccgcggcgc cttgaagttg accagcgcgg cgacctcctt
      541 cgccagcccg atgaagctgt cggtcctggc cacgaagtcg gtctcgcagt tcacctcgac
      601 cagcgtcccg gagttcccct ccacgtgggc gcagacgatc ccctcggatg cgatccgcga
      661 agacttcttc gccgccgccg caaggccctt cgtacggagg tggtcgatcg ccgcctccat
      721 gtcgccgtcc gacgccgtga gggccgcctt gcaatccata aggcccgcgc cggtcttctc
      781 gcggagctcc ttgaccatcc cggatgtgat ctgcatttcc ctgaatctcc ctgatcgttc
      841 gggccgctcg ggacccggga ttattccgcc gtcgcggggg tctgcgccgt cgcgggaccc
      901 ttcggcgcga tggagacttc ctcgtccccc tcggtggaga tgagcgatac cgtgacctcg
      961 ggcgcctccg cctccttgtc gatgcgggag gcgttcttct ccgcgtacgc cgccttcccc
     1021 tcgaggatcg cgtcggccat cttggagagg aacagcttga tcgcgcggat cgcgtcgtcg
     1081 ttccccggga tcacgacgtc gatcaggtcg gggtcgcagt tcgtgtccac gatggcgacg
     1141 atggggatcc ccagccgccg gccctcgagg atcgcgatcg tctcccgcga cgggtcgacg
     1201 acgaacatcg cgtccggcac gcgcttgaga tcccggatgc cgccgagggt cttctcgagc
     1261 ttgacccgct ccttctcgag ctgaaggact tcctttttcg ggagccgctc ggcggtgccg
     1321 tcggtgccga tctccgaaag cttctgcagc cggtcgaggc tcttccggat cgtggcgaag
     1381 ttggtgagca tcccgcccag ccagcgctgg ttgacgaacg gcgtgcctgc ccggcgggcc
     1441 tcctcctcga ccgcctcctg cgcctgcttc ttcgtgccga cgaagagaac cgtcttcccc
     1501 tccgccgcca tgctccgcac cgcctcgtag gcggcacgga acatcttgac cgtctgctga
     1561 aggtcgatga tgtagatccc gtttcgggcg gtgaagatgt accgcttcat cttcgggttc
     1621 caccgcttcg tctggtgccc gaagtggacc cccgcctcca gcagctgctt catcgagatt
     1681 accgagctct gtccgttcgc catccctttc tttcctcctt cggttcaggg gttgttccgc
     1741 cgggcgctcc gcccctcccc atttaccccg tcgatacggg gcaccccggg gagagtcccg
     1801 cccgtgggtg ataaactgca gctaagcctt gcatctatat cacgatcgat atcccgagtt
     1861 caacttcaca tactcgacgc tcagatccga gaagtagacg tagtcgctcc cgttttccag
     1921 gccgaggtcg acgtcgatgg cgtacgcctc cgcccggatc ttcgggacgg cgcggcgcga
     1981 agcggccggg tcggggcgca tcccccggcg cagcagcgtt tccccggcga accgcatcga
     2041 gaccttcatc gggtccaccg cgatccccgc ccgcccgagc accgcgacca cccggcccca
     2101 gttcaggtcg gcgccgtaca cggcggtttt caccaggggg gaggaagcgg ccgcgcgggc
     2161 cgccttcttc gcgtccgcgg cggtgcgcgc gccggtgacc gaaagacgca ccacccgggt
     2221 cgccccctcg ccgtcgcgaa cgatcatcag cgcgagttcc agcagcagcg acaggagcgc
     2281 ctcccggaac gcggcgaggc ccttccccgc cagggggggc aggccgcacg cgccgttggc
     2341 gaagagggca gcggtgtcgt tggtgctcgt gtcgccgtc
//
LOCUS       DATGYW010000566         1600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_145271, whole genome shotgun sequence.
ACCESSION   DATGYW010000566 DATGYW010000000
VERSION     DATGYW010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145271"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..844
                     /locus_tag="VK429_07950"
     CDS             <1..844
                     /locus_tag="VK429_07950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91775.1"
                     /translation="QKVSGVATQLPFPTVAGQENKKGIYTAGLDGSIGVGPASITGFA
                     LYQFGKIDYLGTTATSPQDKDINGWAADLRADLNLGPGKFFIEGLYVSGDSKDDNTAD
                     YKSIFTLNDVNASPGGNSFYGRTDMVILLSNADDINTNTALIGAAAVPGLAYTSRGAV
                     CASSPGNCGRGIWHVGTGFSMALGKQLTGKVGAGYLSASKTLDNADANRKGEGMGTEV
                     NASLNYNIMKGLDVGVVGAYAWLGDFYKNNNTGATGVPITGVSGTKDPDDIYDVHMRL
                     NYAF"
     gene            966..>1600
                     /locus_tag="VK429_07955"
     CDS             966..>1600
                     /locus_tag="VK429_07955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HLN91776.1"
                     /translation="MFENLSEKFQGVLKKLRGHGRISEGNVEGALNEVRLALLEADVN
                     YKVVKDFVAAVKEKALGAEVLASLSPDQHFIKIVHEEMTRMMGAQAQELNLARKPPVP
                     VMLVGLQGSGKTTSCGKLALYLQKRKRTPFLVPADVYRPAAIEQLKVLGRQLEIPVFD
                     SRPDADPVAICREALKYAELNGYDTVLLDTAGRLHIDAPLMEELSRIKAAV"
BASE COUNT          318 a          508 c          519 g          255 t
ORIGIN      
        1 gcagaaggtt tctggcgtcg cgacccaact gccgttcccc accgtcgcgg gtcaggagaa
       61 caagaagggg atctacaccg cggggcttga cgggtccatc ggcgtcggcc cggcgagcat
      121 tacgggcttc gccctctatc agttcggcaa gatcgactac ctggggacga ctgcgacaag
      181 tccgcaagac aaagacatca atggctgggc tgcggacctg cgcgccgatt tgaacctcgg
      241 ccccggcaag ttcttcatcg aggggctcta cgtcagcggc gacagcaaag acgacaacac
      301 ggctgattac aagtcgatct ttaccttgaa cgacgtgaac gcgtctcccg gcgggaactc
      361 cttctacggc cgcacggaca tggtgatcct tctctcgaac gcggacgaca tcaataccaa
      421 taccgccctc atcggggccg ccgccgtccc tgggctcgcc tacacctccc gtggcgcggt
      481 gtgcgcatcg agcccgggga actgtggccg cggcatatgg cacgtcggga ccggcttcag
      541 catggcgctg gggaaacagc tgaccgggaa agtcggcgcc ggctacctgt cggcatccaa
      601 gacgctggat aatgccgatg ccaacaggaa gggcgagggg atgggcaccg aggtcaatgc
      661 aagcctgaac tacaacatca tgaaggggct cgacgtcggc gtggtcggcg cctatgcctg
      721 gttgggggat ttctacaaga acaacaacac cggcgccacc ggcgtcccca tcaccggcgt
      781 ctctggcacc aaggatccgg acgacatcta cgacgtgcac atgcgcctga actacgcgtt
      841 ctaacggttc gacggaacgg tagcggtacg aaagagcccc cgggggagac cccgggggct
      901 tctctttttg ggcggaatcc cctatattcg taggctcatt tgaaggcggc ggaggagcgg
      961 aacgcatgtt cgagaacctg tcggagaagt tccagggcgt cctgaaaaaa ctgcgcgggc
     1021 acgggcgcat ctccgagggg aacgtcgagg gggcgctgaa cgaggtccgc ctcgcgctgc
     1081 tggaagccga cgtcaactac aaggtcgtga aggatttcgt cgcggcggtc aaggagaagg
     1141 cgctcggcgc cgaggtcctc gcctcccttt cgccggacca gcacttcatc aagatcgtcc
     1201 acgaagagat gacccggatg atgggggcgc aggcgcagga gctgaacctg gcccgcaagc
     1261 cccccgtccc cgtaatgctc gtgggtctgc aggggtcggg gaagacgacc tcgtgcggga
     1321 aactcgccct gtacctccag aagaggaagc gcaccccgtt cctggtcccg gccgacgtct
     1381 accgcccggc cgcgatcgag cagctgaagg tcctcgggcg gcagctcgag atccccgtct
     1441 tcgactcccg gcccgacgcc gacccggtgg cgatctgccg ggaggcgttg aaatacgccg
     1501 agctcaacgg ctacgacacg gtcctcctcg acacggcggg gcgcctccac atcgacgcgc
     1561 cgctgatgga ggagctctcc cggatcaagg cggcggtcga
//
LOCUS       DATGYW010000567         1585 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_353569, whole genome shotgun sequence.
ACCESSION   DATGYW010000567 DATGYW010000000
VERSION     DATGYW010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1585
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_353569"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..>1585)
                     /gene="groL"
                     /locus_tag="VK429_07960"
     CDS             complement(41..>1585)
                     /gene="groL"
                     /locus_tag="VK429_07960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011941080.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HLN91777.1"
                     /translation="KVTLGPRGRNVIIDKSFGSPLVTKDGVTVAKEIELPDKFENMGA
                     QMVKEVASKTSDVAGDGTTTATVLAQMIYREGAKLVAAGYNPMDLKRGIDKAVEAVAS
                     ELKRMSKATKDPKEIAQVGTISANNDETIGNIISEAMAKVGKEGVITVEEAKGMETTL
                     EIVEGMQFDRGYLSPYFVTDPERMEVILEDPYILIHEKKISNMKDLLPLLEQIARSGK
                     PLLIVAEEVEGEALATLVVNKLRGTLNATAVKAPGFGDRRKAMLEDIAILTGGKAIAE
                     EMGIKLEAVTLTDLGRAKRVVIDKDNTTIIDGAGKKADIEGRVKQIRAQVEETTSDYD
                     KEKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVAGGGVAY
                     IRAASSLDGFKLEHDQQAGVDIVRKALFEPAKQIAINAGQDGGVIVDKIRSGKGNFGY
                     NAATEEFEDLMKGGILDPTKVTRVALQNAASVAGLMITTECAIAEKPEEKKEMPQMPP
                     GGGGMY"
BASE COUNT          196 a          564 c          477 g          348 t
ORIGIN      
        1 gccgcagcgg cccggggagc gctccagcga tctgattcct ttaatacatc ccgccgccgc
       61 ccgggggcat ctgcggcatt tccttcttct cctcgggttt ctcggcgatg gcgcattcgg
      121 tggtgatcat gaggcccgcc accgacgcgg cgttctgcag cgccacgcgg gtcaccttgg
      181 tcgggtcgag gattccaccc ttcatcaggt cctcgaactc ctcggtggcc gcgttgtatc
      241 cgaagttccc cttcccgctc cggatcttgt cgacgatgac gccgccgtcc tggccggcgt
      301 tgatcgcgat ctgcttggcc ggctcgaaca gtgccttccg gacaatgtcc acgcccgcct
      361 gctggtcgtg ctccagcttg aaaccgtcca gcgaggaagc ggcccggata taagccacgc
      421 cgccgccggc gacgatcccc tcctccacgg ccgcgcgggt ggcgtgcagc gcgtcctcga
      481 cgcgcgcctt cttctccttc atctccgtct cggtggccgc gccgacgttg atcaccgcca
      541 cgccgccgac cagcttcgcc agccgctcct ggagtttctc cttgtcgtag tcggaggtgg
      601 tctcctcgac ctgcgcccgg atctgcttca cccggccctc gatgtcggcc ttcttcccgg
      661 ctccgtcgat gatcgtggtg ttgtccttgt cgatgaccac gcgctttgcg cgtcccaggt
      721 cggtcaaggt gaccgcctcg agcttgatcc ccatctcctc ggcgatcgcc ttcccgccgg
      781 tgaggatcgc gatgtcctcg agcatcgcct tccgccggtc cccgaagccg ggggccttca
      841 cggcggtggc gttcagcgtc ccgcgaagct tgttcaccac gagggtggcc agcgcctccc
      901 cctcgacctc ctccgccacg atcagaagcg gcttgccgct gcgggcgatc tgctccagca
      961 gcgggagcag gtccttcatg ttggagatct tcttttcgtg gatgaggatg tacgggtcct
     1021 cgaggatgac ctccatccgc tcggggtcgg tgacgaagta cggggagagg tagccgcgat
     1081 cgaactgcat cccttccacg atctcgaggg tggtctccat ccccttggct tcctcgacgg
     1141 tgatgacccc ttccttgccg accttggcca tcgcctcgga gatgatgttc ccgatcgtct
     1201 cgtcgttgtt cgccgagatg gtgccgacct gcgcgatctc cttggggtcc ttcgtcgcct
     1261 tggacatcct cttgagctcg gaggcgacgg cctcgacggc cttgtcgatc ccgcgcttga
     1321 ggtccatcgg gttgtagccg gccgcgacca gcttcgcccc ttcccggtag atcatctggg
     1381 ccagcacggt ggcggtggtg gtcccgtctc ccgcgacgtc gctcgtcttg gaagcgacct
     1441 ccttcaccat ctgcgcgccc atgttctcga acttgtccgg cagttcgatc tccttggcca
     1501 ccgtgacgcc gtccttggtg accagggggg agccgaacga cttgtcgatg atcacgttgc
     1561 ggccccgggg gcccagggtc acctt
//
LOCUS       DATGYW010000568         2418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_476893, whole genome shotgun sequence.
ACCESSION   DATGYW010000568 DATGYW010000000
VERSION     DATGYW010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2418
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_476893"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..841)
                     /locus_tag="VK429_07965"
     CDS             complement(<1..841)
                     /locus_tag="VK429_07965"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012302278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HLN91778.1"
                     /translation="MSGETVFRGELSVPGDKSISHRAVMFAALATGVSRIRGFLNAAD
                     TLSTAGMMRALGARIEEASPTELRIEGKGLHALVEPTDVIDAGNSGTTIRIGSGILAA
                     QPFLSVVTGDRYLRRRPMGRVIDPLTRMGASILGRDGNRLPPLCIRGGALRGIRYEMP
                     VASAQVKSSLLLAGLYADSPVTVVEPMRSRDHTERMLAAMGAGVAREGNAVTVAPCER
                     LDPLAMTIPGDLSSAVFFLVLAAVTPGSVLTVRGVGVNPFRTGILDVLRRMGADIRPV
                     GERI"
     gene            complement(838..1692)
                     /locus_tag="VK429_07970"
     CDS             complement(838..1692)
                     /locus_tag="VK429_07970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011735259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HLN91779.1"
                     /translation="MARERIGILGLGLIGGSLALALKGKRGAPEVWGCDRRKETVRRA
                     LSAGAISRGCTEAQLSACDMVIVCVPVLRSIEAIRRLGPRMRPGTVLTDAGSVKSGIV
                     REGERAAARGAFFVGGHPIAGTEASGFSAADPTLFQGRSFIVTPTRRTDADAIFRVER
                     IWKRAGSAVLLRMDPKTHDHVFAYVSHLPHAVAYALVHSVATLPSRVPLGYSAGGFRD
                     FTRIASSNPEMWKDIVLENRTELLRALSHYRRNLALLERRIAAGDAGGLLEYFGRAKK
                     TRDGLLSS"
     gene            complement(1697..>2418)
                     /gene="aroF"
                     /locus_tag="VK429_07975"
     CDS             complement(1697..>2418)
                     /gene="aroF"
                     /locus_tag="VK429_07975"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004512317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HLN91780.1"
                     /translation="AGPCSVEGRDMMVGVAESVASSGATFLRGGAFKPRTSPYAFQGL
                     GEEGLKYLAEARDRTGLPVATELMDPRDLDLVARYADIIQIGARNMQNFRLLTEVGKL
                     DKPVILKRGMSATIQEWLMSAEYIASEGNQKIILCERGIRTYETATRNTFDVSSIPVV
                     KSLSHLPVIADPSHAAGKMALVEPLAAAAIAAGADGLMIEVHHQPEKALSDGPQSLKP
                     DAFTRMVGRLRKVAEAVGRTL"
BASE COUNT          377 a          859 c          829 g          353 t
ORIGIN      
        1 cgatccgctc tccgacaggg cggatgtcgg cccccatcct gcggagcacg tcgaggatgc
       61 ccgtgcggaa cgggttcacc cccacgccgc ggacggtgag cacggagccc ggggtcacgg
      121 cggcaaggac gaggaagaag acggcggagg agaggtcgcc cggtatcgtc atcgccagcg
      181 gatcaaggcg ctcgcacggg gccacggtga ccgcgttccc ttcgcgggcg accccggctc
      241 ccatcgccgc cagcatccgc tcggtgtggt cccgcgaccg catcggctcc accaccgtga
      301 ccggggagtc ggcgtacagc ccggcgagca aaagcgacga cttcacctgc gcggaagcca
      361 ccggcatttc gtaccggatc ccccggagcg cgccgccgcg gatgcacagc gggggaaggc
      421 gattcccgtc ccgcccaagg atcgacgccc ccattcgcgt cagcgggtcg atcacgcggc
      481 ccatcggtcg gcggcgaagg taccggtcgc ccgtgaccac cgagaggaac ggctgggcgg
      541 cgaggatccc cgatccgatc cggatcgtgg tccccgagtt cccggcgtcg atcacgtcgg
      601 tgggctcgac aagggcgtga agcccctttc cctcgatcct gagctcggtg ggcgatgcct
      661 cctcgatccg cgcgccgagg gcgcgcatca ttcccgccgt cgacagcgta tccgcggcgt
      721 tgaggaatcc gcggatgcgg ctcacccccg tcgcgagagc ggcgaacatc acagcgcggt
      781 ggctgatcga tttgtcgccc gggacggaaa gctctccgcg gaataccgtt tccccgctca
      841 tgacgacagc agcccgtccc gcgtcttctt cgcgcgcccg aaatattcga gcagcccgcc
      901 cgcgtcgccc gcggcgatcc ggcgttcgag gagggcgaga ttccgccgat agtgcgagag
      961 cgcccgaagg agctccgtcc ggttctcgag cacgatgtcc ttccacattt ccgggttgct
     1021 cgacgcgatc cgggtgaagt ccctgaaccc ccccgcggag taaccgagcg ggaccctgga
     1081 gggcaaggtc gccacggagt ggacgagggc gtacgccacc gcgtggggaa gatgggagac
     1141 gtaggcgaag acgtggtcgt gtgtcttcgg gtccatccgg agcagaaccg cggaaccggc
     1201 gcgtttccag atccgctcca cgcggaagat ggcgtccgcg tcggtccggc gggtgggggt
     1261 cacgatgaac gagcgtccct ggaacagggt cgggtcggcg gcggaaaatc ccgacgcttc
     1321 cgtccccgcg atcgggtggc ccccgacgaa gaaggcgccc ctcgccgcgg cgcgctcccc
     1381 ttcccggacg atcccggact tcacgctccc cgcgtcggtg aggaccgtcc ccggccgcat
     1441 ccgcggaccg agacgccgga tcgcctcgat ggagcgaaga accggtacgc acacgatcac
     1501 catgtcgcac gcggaaagct gcgcctcggt gcagccgcgc gagatcgcgc cggcggagag
     1561 cgcccggcgt acggtctcct tcctgcggtc gcacccccac acctcggggg cgcctcgctt
     1621 tcccttgagg gccagcgcca gggaacctcc gatgagcccg aggccgagga tgccaatccg
     1681 ttcccgcgcc acgacgctac agtgtcctcc cgaccgcctc ggccaccttc cgcagcctcc
     1741 cgaccatccg cgtgaacgcg tccggcttga gcgactgggg gccgtcggag agcgccttct
     1801 cgggctggtg gtggacctcg atcatcaggc cgtccgcccc cgcggcgatc gcggccgcgg
     1861 cgagcggctc caccagcgcc atcttcccgg cggcatggct gggatcggcg atcacgggaa
     1921 ggtgggagag ggacttgacc accggaatcg aggagacgtc gaaggtgttc cgggtggccg
     1981 tctcgtacgt gcggatcccg cgttcgcaca ggatgatctt ctggttcccc tcggaggcga
     2041 tgtactccgc cgacatgagc cactcctgga tcgtcgcgct catcccgcgc ttgaggatca
     2101 ccggcttgtc gagcttcccg acctcggtga ggaggcggaa gttctgcatg ttccgcgccc
     2161 cgatctggat gatgtcggcg taccgcgcca caagatcgag gtcccggggg tccatgagct
     2221 cggtggccac ggggagtccg gtccggtcgc gggcctccgc gaggtatttc aacccctcct
     2281 cgcccaatcc ctggaaggcg tacggggagg tgcgcggctt gaacgcgccg ccgcgcagga
     2341 aggtcgcccc cgaggaggcg acgctctccg cgacccccac catcatgtcg cgcccctcga
     2401 cggagcaggg gccggcga
//
LOCUS       DATGYW010000569         2430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_476934, whole genome shotgun sequence.
ACCESSION   DATGYW010000569 DATGYW010000000
VERSION     DATGYW010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_476934"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..519
                     /locus_tag="VK429_07980"
     CDS             <1..519
                     /locus_tag="VK429_07980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011022233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91781.1"
                     /translation="SDRGIRLRRTYQLNTGGNTDFLNMLNRSRLESKRISKTEAVTSA
                     LSHGVSPDDVHIGPSDYVPWQKDNKLCFLRIEGEGFGGLPIELELRLSVTDSPNSAGV
                     GIDAIRFCRLGREMGLSGPLLAPSAYFMKHPPEQHNDDDARRELEEVIADFQAWRRTQ
                     EASPRTPCTSPT"
     gene            complement(446..1552)
                     /locus_tag="VK429_07985"
     CDS             complement(446..1552)
                     /locus_tag="VK429_07985"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLN91782.1"
                     /translation="MNVFLLGLLRGLSKRGISTDVLTRATGETVEVADPFPGVRVFHV
                     PCGWVDPPSRESAFASLDLFVERSRILMRGERIEPRVVSAHYWMSGIAARKLAGAPMV
                     LCFHTVEARKVPAPGAGQEPLSSIRRAQEAALAREASRVVCFSEYDLAENRRIFPELS
                     EKGVVIPPGVDDRFRRLPPRVVARSYLGLPQEGMIFLLASRGDAGKNIAAAVDAFRAM
                     RGRWKGPATLIVAGQEGPEGGPGGDVFFLGSLPHAGMPMLFAAADVVVCPSLYESFGM
                     VPLEALSGGVPVVVPEGTYWGDRIRSEGGGLVYPPGEPDRFSGALLDLASSPELRARL
                     SLEGAAVAAPFTWERCTASWETLLASVSTPGSPR"
     gene            complement(1621..>2430)
                     /locus_tag="VK429_07990"
     CDS             complement(1621..>2430)
                     /locus_tag="VK429_07990"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HLN91783.1"
                     /translation="DEGLLFLCRCPNEGWTFLGGEQVADYLDALVAPTQAEAFWREFL
                     ERGLPALGGGPLTLPGLVDGTPALTLLPSICRERGLSCSVEEMDRAPFISLPGSFEEY
                     LERLGKKERHELRRKMRRAGDLLPELAFRVTRTPEELANDLPSFVELHRKSHPEKEAF
                     MDEAMATFFRDVAEGFLASGRLRLAFLSTRGVDVASVFQFRTGGALLLYNSGYDPSHR
                     AANPGLVLIARSIGQAVDEGCEEYDFLRGTERYKYDLGGVDRGIYRLTVSA"
BASE COUNT          426 a          869 c          819 g          316 t
ORIGIN      
        1 tcggaccggg ggatccgtct ccgtcggacg taccagctga acaccggcgg gaacacggac
       61 ttcctgaaca tgctgaaccg cagccgcctc gagtcgaaac ggatctccaa gaccgaggcg
      121 gtaaccagcg ccctctcgca cggggtttcc ccggacgacg tccacatcgg gccgtccgac
      181 tacgtcccct ggcagaagga caacaagctc tgcttcctgc ggatcgaggg ggaagggttc
      241 ggggggctgc cgatcgagct ggagctgcgc ctctccgtca ccgactcgcc gaacagcgcc
      301 ggcgtgggga tcgacgcgat ccggttctgc cgcctcggga gggagatggg gctgtcgggc
      361 cccctgctcg ccccgtcggc ctatttcatg aagcatcccc cggagcagca caacgacgac
      421 gacgcgcggc gcgaactcga ggaggtcatc gcggacttcc aggcgtggag acggacgcaa
      481 gaagcgtctc ccaggacgcc gtgcacctct cccacgtgaa gggcgccgcc acggcggccc
      541 cctccagcga cagccgggcg cgcaattccg gcgacgacgc gagatcgagg agcgcgccgg
      601 aaaaccggtc cggctccccc ggcgggtaga ccagcccccc gccctccgaa cggatccggt
      661 ccccccagta cgtcccctcc ggcacgacga ccggcacgcc ccccgagagc gcctccagcg
      721 gcaccatccc gaacgattcg tacagcgacg ggcagacgac gacgtccgcc gcggcgaaca
      781 gcatcggcat gccggcgtgc ggaagggaac cgaggaagaa gacgtccccc ccggggccgc
      841 cttccggccc ctcctgcccg gccacgatga gggtcgccgg ccccttccag cgaccccgca
      901 tcgcgcggaa cgcgtcgacg gccgcggcga tgtttttccc ggcgtcccct cgggatgcga
      961 gcaggaagat catcccttcc tggggaagtc cgaggtacga ccgcgcgacc acgcgggggg
     1021 gaaggcgccg gaaccggtcg tccacccccg gcgggatgac cacccccttc tccgacagct
     1081 ccgggaagat ccgccggttc tccgcgaggt cgtactccga gaagcagacg acgcgggacg
     1141 cctcccgcgc cagcgccgcc tcctgcgccc tgcggatgga agagagcggc tcctgtccgg
     1201 ccccgggcgc cgggaccttg cgcgcctcca ccgtgtggaa gcagaggacc atcggggcgc
     1261 cggcgagctt tcgcgcggcg atgcccgaca tccagtagtg cgccgagacg acgcgcggct
     1321 cgatccgctc cccgcgcatc aggatccggc tccgttcgac gaagagatcg agggacgcga
     1381 acgcgctttc ccgggaggga ggatccaccc acccgcacgg gacgtgaaag acccggaccc
     1441 ccgggaacgg gtcggcgacc tcgacggttt cccccgtggc gcgggtgagg acgtcggtgg
     1501 agattccccg cttcgacagc ccccggagga gcccgaggag gaagacgttc atccctccgg
     1561 cgagcccctc ccccggttcc tccgatgggc atgtgtgata agaaacgaga aggtgccgcg
     1621 tcaagcggaa accgtcaggc gatagatccc ccggtccacc cctccgaggt cgtacttgta
     1681 ccgttccgta cctcgcagaa aatcgtactc ctcgcaaccc tcatcgacgg cctgaccgat
     1741 ggagcgcgcg atgaggacga gcccggggtt ggccgcgcgg tgcgacggat cgtacccgga
     1801 gttgtagaga agcagggcgc cgccggtgcg gaactggaac acggaggcga cgtccacccc
     1861 ccgcgtggag aggaacgcga gacgcagtcg gccggaggcg aggaacccct ccgccacgtc
     1921 gcggaaaaag gtcgccatcg cctcgtccat gaaggcctcc ttctcggggt ggctcttccg
     1981 gtggagttcc acgaaggagg gaagatcgtt cgcgagttct tccggagtcc gggtcacccg
     2041 gaaggcgagt tccggcagga gatcccccgc gcgccgcatc ttccgccgca attcgtgacg
     2101 ctccttcttc cccagccgtt cgagatactc ctcgaaggag ccgggcaggg agatgaaggg
     2161 ggcccggtcc atctcctcga cggagcagga aagacccctc tcccggcaga tcgacgggag
     2221 gagcgtcagg gccggcgttc catccacgag gcccgggagc gtcaggggac cgccgcccag
     2281 cgcggggagc ccccgttcga ggaactcccg ccagaaggcc tcggcctggg ttggcgcgac
     2341 aagggcgtcg aggtagtccg cgacctgctc gccgccgagg aaggtccatc cctcgttcgg
     2401 acagcggcac aggaagagga gcccttcgtc
//
LOCUS       DATGYW010000570         1778 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_476953, whole genome shotgun sequence.
ACCESSION   DATGYW010000570 DATGYW010000000
VERSION     DATGYW010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1778
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_476953"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="VK429_07995"
     CDS             complement(<1..269)
                     /locus_tag="VK429_07995"
                     /inference="COORDINATES: protein motif:HMM:NF012879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HLN91784.1"
                     /translation="MVQKHLLDNGTTVLIDEMQDVRSFALGFFVGAGSGEEPAGKRGL
                     SHFLEHVLFKRTRRRTTVAIARAIDRLGGDVDAFTTKEYTGFYAHT"
     gene            complement(407..1066)
                     /locus_tag="VK429_08000"
     CDS             complement(407..1066)
                     /locus_tag="VK429_08000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HLN91785.1"
                     /translation="MDRKSEIGDRKSGSPTTDYRLPVSEAGFTMVAVVIVIAILTILI
                     AAVGPSIGTIMRREREEELIFRGKQYARAIALFQRRYGRYPTSLKEMWENNPRTIRKL
                     WKDPMCDCADWKLLIQGQPDSVPFLDQNVDPSNRPPSTYTKLIRPTPTPGMSGPEGEE
                     KNVGPIVGVRSKAHRQALREWRGRRYYDEWRFIVGDADSDVAFTPFNPETLRLTPVRR
                     P"
     gene            complement(1069..1434)
                     /locus_tag="VK429_08005"
     CDS             complement(1069..1434)
                     /locus_tag="VK429_08005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013648659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein G"
                     /protein_id="HLN91786.1"
                     /translation="MTIIGILAAIAIPALRDSPQRAREAALRGDLFTLRSTIDQFHGD
                     KGYYPPDLAKLVSEGYLRQIPIDPMTKSRDTWQVDPEELEPTSEGAGPPEESATPGIV
                     DVHSGSTAKALDGTLYKDW"
     gene            complement(1574..>1778)
                     /locus_tag="VK429_08010"
     CDS             complement(1574..>1778)
                     /locus_tag="VK429_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020707492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91787.1"
                     /translation="VDLIGQVNKKMKFLRRVPIDPMTKKAEWGLRSFQDDKDSLSWGG
                     QNVYDVFSLSGGRGIDGTYYKDW"
BASE COUNT          296 a          555 c          578 g          349 t
ORIGIN      
        1 gtgtgggcgt agaaacccgt gtactccttg gtcgtgaagg cgtcgacgtc tccgccgagc
       61 cggtcgatcg cccgggcgat agcgaccgtc gtccgccttc gggtccgctt gaagaggacg
      121 tgctccagga aatgcgacag accacgcttg ccggccggtt cttctcccga gccggctccg
      181 acgaagaagc cgagcgcgaa ggaccgcaca tcctgcatct cgtcgatcag gacggtcgtt
      241 ccgttatcga gaaggtgttt ttggaccatc ggagaccccc ggcaggcgga accgattcta
      301 tccccggccg ggcagtcggg gcgatttctt tgaagctatt gatgagaagg tacttatttt
      361 gttgaaacag ctccggagga ctccgggtcg cgccggaaac cggcacttac gggcgccgga
      421 cgggcgtgag gcggagggtc tcggggttga acggcgtgaa agccacatcg ctgtcggcgt
      481 cgccgacgat gaacctccac tcgtcgtaat agcgcctccc cctccactcg cgaagcgcct
      541 ggcggtgggc cttggagcgc acacccacga tcggccccac gttcttctct tcgccttcgg
      601 ggcccgacat ccccggcgtc ggagttggac ggatgagctt cgtgtatgtc gacggggggc
      661 ggttgctcgg gtcgacattc tggtccagga acgggaccga gtcgggctgc ccctggatca
      721 ggagcttcca gtcggcgcaa tcgcacatcg ggtccttcca gagcttccgg atcgttcggg
      781 gattgttctc ccacatctcc ttcaaggagg tcgggtagcg accgtaccgc cgctgaaaca
      841 gcgcaatcgc tcgcgcgtac tgcttgccgc gaaagatgag ctcttcctcg cgttcgcgcc
      901 gcatgatggt cccgatcgag gggccgaccg ccgcgatcag gatcgtcagg atggcgatga
      961 cgatcacgac cgcgaccatg gtgaagccgg cctcggaaac gggtaatcgg tagtcggtag
     1021 tcgggctccc cgatttccga tctccgattt ccgacttccg atccacgatt accaatcctt
     1081 gtacaaggtc ccgtcgaggg ccttcgcggt cgagccactg tggacgtcga cgatgccggg
     1141 cgtggcgctt tcctccggcg gccccgcgcc ttcggacgtc ggttcgagct cctccgggtc
     1201 gacctgccag gtatcgcgcg acttggtcat cggatcgatc gggatctgcc tcaagtatcc
     1261 ctcggagacg agtttggcga ggtcgggcgg gtagtagccc ttgtcgccgt ggaactggtc
     1321 gatcgtgctg cgcagggtga agaggtcccc gcggagggcg gcctcgcggg cgcgctgggg
     1381 ggaatcccgc aaggcgggga tcgcaatcgc cgcgaggatg ccgatgatcg tcatcaccac
     1441 taggagctcg aggagggtga agccccgctc ggaagtcggg aaacgggaaa cggaagacgg
     1501 ccggctaccg ggcccgctcg cctgggaatt cattcgtttt cccgtgtccg ttttccgttt
     1561 cccggccatt cgctcaccag tccttgtagt aggtcccgtc gatgcccctt ccgccggaaa
     1621 gggagaagac gtcgtagacg ttctgcccgc cccacgacaa ggagtccttg tcgtcctgga
     1681 acgaacgaag gccccactcc gccttcttcg tcatcgggtc gatcgggacg cgccggagaa
     1741 acttcatctt cttgttgacc tggccgatta ggtccacg
//
LOCUS       DATGYW010000571         5008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_477082, whole genome shotgun sequence.
ACCESSION   DATGYW010000571 DATGYW010000000
VERSION     DATGYW010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 5008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5008
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477082"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1810
                     /locus_tag="VK429_08015"
     CDS             <1..1810
                     /locus_tag="VK429_08015"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HLN91788.1"
                     /translation="RTEAVVVTATRIEEKVSEQASSVSVVPREEIELKRPSVAPEAMQ
                     GIPGVVVQQSGSPGNLANIRIRGGDSNGTLVMIDGFPLNGPSNGQFDVSSLPLGGFER
                     IEVVRGAQSALYGSNAMFGVVNFIPKKAGEGSRAAAGLAGGSHNTLDWKGDVQWGNRK
                     GGLTLGAGGFLSDGNLPNDHTDIISFLGTGDYRFGEKNRVHAIFLSTDESKEIPVTDR
                     GSDPNALKKRRDLLAGVRWEIDVTKSFSLSVSAAGFHEYLDISYPAAPTTTIVEAYTT
                     KSRRGFLRAEGRYSVGSVSHTFFGVEYNRDHSTDNTYYFDSSFPVSSFNPFVDNPSAS
                     TTNRSVYLQEELRFGKGGGASLGGRVDGNSEAGTRVSPKVAVFKEFGTSGVKLRAAYG
                     RGFRVPTIFEKHGKYGNPDLDPEWADSYEAGIDYRTRGGTATVSGTYFYQDKHDQISY
                     QGLNKTTNVDAFSRGVEGFATWWFHPSVGTVLSYTYTDSWDKHNQREIIGVPAQRGSV
                     SLVAAPVSGFEGQLSWRVESDQLDFGPTDWSPGKRPGFGVLDIYARHAIPKPAPEWKE
                     IVLFGKVQNLLNRDYEERKGYPSPGITFLLGAEVSI"
     gene            2232..2588
                     /gene="dksA"
                     /locus_tag="VK429_08020"
     CDS             2232..2588
                     /gene="dksA"
                     /locus_tag="VK429_08020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012468486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HLN91789.1"
                     /translation="MDRVVIEKCRAELQSQLDELLAGAERTVVDMTSVEEENFPDPTD
                     RASLESNRNFTLRLRDRDRKLVAKIKDAMKRIEVGTFGICDGCGGEIEEKRLIARPVT
                     SLCIDCKTVAEEEEVK"
     gene            2638..3633
                     /gene="galT"
                     /locus_tag="VK429_08025"
     CDS             2638..3633
                     /gene="galT"
                     /locus_tag="VK429_08025"
                     /EC_number="2.7.7.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013707343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008108 - UDP-glucose:hexose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HLN91790.1"
                     /translation="MTELRKDPVVGRWVIISTERAKRPHEYPPEPAPRREGLCPLCPG
                     SERMTPPEILGYRQGGQPNDPNWTLRVVPNKFPALRIEGELGKAADGIYDRMRGIGAH
                     EVVIESERHDIDLFDLPENRFQDVLWAYRDRLLDLSKDHRFKSVLIFKNHGAAAGASL
                     THSHSQLIALPVIPKRVMEEMNGCREYYRFRDRCLLCDIVVQEMEQKVRIVEETGEFL
                     AFSPYAPRFPFETWIVPKRHQCAYEMIEGDQAKALAAVFRRTLRRLNLALENPPFNFI
                     VHSAPFQERAADFFHWHIEIMPKLTKVAGFEWGSGFYINPTPPEESAKYLRELPE"
     gene            3650..>5008
                     /locus_tag="VK429_08030"
     CDS             3650..>5008
                     /locus_tag="VK429_08030"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR02095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch synthase"
                     /protein_id="HLN91791.1"
                     /translation="MKVLVASSEIVPFAKTGGLADATGALPKALRRIGVEADCVLPLY
                     RCVDRDRFPFKGPGQAILVPLGNREEEGSVEETVAGGGVRAFLVRNDRYFDREFLYGT
                     RDGDYVDNSERFTFFCRAVMEWIARSGRRYDIIHCNDWQTALLPVYVKTLYADREPFR
                     GTGTVFTVHNLGYQGLFWNHDLPMMGLGWELFTPQGLEFYGKINLMKAGLLFADVLST
                     VSDTYSREIQTPEYGYGLEGVLYERRDDLYGIVNGIDDEEWHPGTDRWIAATYSAGDL
                     SGKAACRRDLLSVFGLPPGDDPVLGLIGRLTAQKGFDLVERIGEWLAEQPLRVVILGA
                     GDRKYEEAMEELGRKYPDRIAIRVAYDNALAHKIEAGSDMYLMPSRYEPCGLNQIYSL
                     KYGTVPIVRETGGLADTVTDADEDPAAGTGFTFRRYEAEELKGAVTRALAAYADRPRW
                     DGI"
BASE COUNT          938 a         1567 c         1695 g          808 t
ORIGIN      
        1 gcggaccgag gccgtggtcg tcacggcgac gcggatcgag gagaaggtct cggagcaggc
       61 gtcgtcggtg agcgtcgtgc cgcgggaaga gatcgagctg aagcgcccgt cggtggcgcc
      121 ggaggcgatg cagggcatcc cgggtgtcgt ggtacagcag agcggatctc ccggcaacct
      181 cgcgaatatc cgcatccggg ggggagacag caacgggacg ctcgtgatga tcgacggatt
      241 tcccctgaac ggtccctcca acggacaatt cgacgtcagc tccctgcccc tcgggggctt
      301 cgaacggatc gaggtggttc ggggagcgca gagcgctctc tacgggtcga acgcgatgtt
      361 cggggtagtg aacttcatcc cgaaaaaggc gggggaagga tccagagccg cagccggcct
      421 cgcgggggga agtcacaata ccctcgactg gaaaggggat gtccagtggg ggaaccggaa
      481 gggaggtctt actctcggcg ccggtggttt cctgagcgac gggaacctgc cgaacgacca
      541 cacggacatc atttccttcc tcgggacggg cgactatcgg ttcggtgaga agaacagggt
      601 ccacgccatc ttcctgtcga ccgacgaatc gaaggagatc cccgtcaccg accgggggtc
      661 cgacccgaac gccttgaaaa agcgccggga tctgctcgcc ggcgtccggt gggagatcga
      721 tgtgacgaaa tcgttttcct tgagcgtctc cgccgccggg ttccacgaat atcttgatat
      781 ttcgtatccc gcggcgccga cgacgacgat cgtggaagcg tacacgacga aatcccgcag
      841 gggctttctc cgcgccgaag gacgctattc cgtcgggtcc gtatcccaca ccttcttcgg
      901 ggtggagtac aatcgggacc actcgaccga caatacctac tacttcgatt cctctttccc
      961 cgtctcgtcc ttcaatccgt ttgtcgacaa cccgtcggca tcgacgacca atcggtcggt
     1021 gtacctgcag gaagagctgc ggttcgggaa ggggggcggt gccagccttg gagggcgggt
     1081 cgacgggaat tccgaggcgg gaacgagggt ttctcccaag gtggcggtct tcaaggagtt
     1141 tgggacgagc ggggtgaagc tgcgcgccgc ctacgggaga gggttccgtg tcccgacgat
     1201 tttcgaaaaa cacggaaaat acggaaaccc ggacctggac ccggaatggg cggattccta
     1261 tgaggcgggg atcgattacc ggacgcgcgg gggaacagcg acggtttccg ggacgtattt
     1321 ctatcaggac aagcacgacc agatcagtta ccaggggctg aacaagacca cgaatgtgga
     1381 cgcattctcg cggggggtcg aaggtttcgc gacgtggtgg ttccatccat cggtagggac
     1441 cgtcctctcg tacacctata cggactcctg ggacaagcat aaccagaggg agatcatcgg
     1501 cgtccccgcc caacgcggat cggtttccct cgtggcggcc cccgtttcgg ggttcgaagg
     1561 tcaactgagc tggagggtgg aaagcgatca gctcgatttc ggccccaccg actggtcccc
     1621 cgggaaaagg cccggattcg gagtgctgga tatctatgcc cggcacgcga ttcccaaacc
     1681 cgcgccggag tggaaagaga tcgtcctgtt cggcaaggtc cagaacctcc tgaaccgcga
     1741 ctacgaggag cggaaagggt acccctcccc ggggatcacc ttcctcctgg gtgcggaggt
     1801 gagcatctga gcgtcgcccg tggagccaaa tgttgggcgt ttcataaata ctgcaacgta
     1861 tcgggatgac ggtacggaag gcgcaccccg ctcccgtacg aaatgcgctc accggggtac
     1921 cccgcagcgt acgacttgag ggacacgcaa cgggaggggc cggcggagtc gccgcaggag
     1981 ggggggcgca gtgaggtaaa gcgcagccgt gcaggttcac cgcacggcga gccacgaacg
     2041 gagccccgcc ctccgaggcg gcgcagccga agggtgagtc ccggaggtgc aacgccgtcc
     2101 gggatcgctc tttcgattcg ttgccgtatt ggtgaaatgg agcactgagc cacgacgccg
     2161 ctccgtcttt acacccccgg ggaaacggga taccgtatct gcagagggct gttccccggg
     2221 ggctggaacc gatggaccgc gtcgtcatcg aaaaatgccg ggccgagctc cagagtcagc
     2281 tggacgaact gttggcggga gcggagcgga cggtcgtcga catgaccagc gttgaggagg
     2341 agaacttccc cgacccgacc gaccgggcct cgctcgagtc gaaccggaac ttcaccctcc
     2401 gccttcggga ccgggaccgc aagcttgtgg ccaagatcaa ggatgccatg aaacggatcg
     2461 aggtcggaac gttcgggatc tgcgacgggt gcggcgggga gatcgaggag aaacggctga
     2521 tcgccaggcc ggtcacctcc ctgtgcatcg actgcaagac cgtcgccgag gaggaagagg
     2581 tcaagtaggc gtcccgccgg aggccacccc gacttccacc cgcccaccgg aggcagcatg
     2641 acggaacttc gaaaagaccc ggtcgtcggc cggtgggtca tcatctccac cgaacgcgcc
     2701 aagcgccccc acgaatatcc tccggagccc gccccgcggc gcgaggggtt gtgccccctc
     2761 tgtccgggaa gcgagcggat gaccccgccc gaaatcctcg ggtaccgcca gggcgggcag
     2821 cccaacgacc cgaactggac cttgcgcgtc gttcccaaca agtttcccgc gcttcggatc
     2881 gagggggagc tggggaaggc ggccgacggg atctacgacc ggatgcgcgg catcggcgcc
     2941 cacgaagtcg tcatcgagtc ggaacggcac gacatcgacc tgttcgacct gcccgagaat
     3001 cggttccagg acgtcctgtg ggcgtaccgg gaccgcctcc tcgacctgtc gaaagaccac
     3061 cggttcaagt cggtcctcat cttcaagaac cacggggcgg ccgccggggc gtccctgacc
     3121 cacagccact cccagttgat cgcccttccc gtcatcccga agcgggtgat ggaggagatg
     3181 aacggctgcc gggagtatta ccgcttccgc gaccggtgcc tcttgtgcga catcgttgtc
     3241 caggagatgg aacagaaggt cagaatcgtc gaggagaccg gggaattcct cgccttctct
     3301 ccgtacgccc cccgcttccc gttcgagacc tggatcgttc cgaagcgcca ccagtgcgcc
     3361 tacgagatga tcgaggggga ccaggcgaaa gcgctcgccg ccgtcttccg gcggaccttg
     3421 cggcgcctga acctcgccct cgaaaacccg cccttcaact tcatcgtcca cagcgccccg
     3481 ttccaggaga gggcggcgga ctttttccac tggcacatcg agatcatgcc gaagctgacg
     3541 aaggtggcgg ggttcgagtg ggggtccggg ttctacatca acccgacccc tcccgaggag
     3601 tccgccaagt acctccgcga gcttcccgag tgagccgggg ggccggtcga tgaaggtcct
     3661 cgtcgcctcc tcggagattg tccccttcgc gaaaacgggg ggcctggcgg acgccaccgg
     3721 ggcgctcccc aaggcgcttc gcaggatcgg cgtcgaggcc gactgcgtcc tccccctcta
     3781 ccgctgcgtg gaccgggacc ggttcccctt caagggcccg gggcaggcga tcctcgttcc
     3841 cctcgggaac cgggaggagg aagggagcgt cgaggagacc gtcgcgggag gcggcgtccg
     3901 cgccttcctc gtccgcaacg accggtactt cgaccgggag ttcctctacg ggacccgcga
     3961 cggcgactac gtcgacaact ccgagcggtt cacattcttc tgccgcgccg tgatggagtg
     4021 gatcgcgcgc tccgggcggc ggtacgacat catccactgc aacgactggc agaccgccct
     4081 tctcccggtg tacgtgaaga cgctctatgc cgaccgcgag ccgttccgcg ggacgggaac
     4141 cgtcttcacc gtccacaacc tcggatacca ggggctgttc tggaaccacg accttccgat
     4201 gatgggcctc gggtgggagc tgttcacccc ccaggggctg gagttctacg ggaagatcaa
     4261 cctgatgaag gcgggcctgc tgttcgcgga cgtcctctcc accgtgtccg acacctacag
     4321 ccgggagatc cagactccgg aatacggata cggtctcgag ggggtcctct acgagcgccg
     4381 cgacgatctc tacggcatcg tgaacgggat cgacgacgag gagtggcacc cgggcaccga
     4441 tcggtggatc gcggcgacct actccgcggg cgacctgtcg gggaaggcgg cgtgccgacg
     4501 ggacctgctc tcggtgttcg ggcttccacc gggggacgac ccggtcctgg gcctgatcgg
     4561 gcggctcacg gcgcaaaaag ggttcgacct cgtcgagcgg atcggggagt ggcttgcgga
     4621 acagccgctg cgcgtggtga tcctcggcgc cggggaccgg aagtacgagg aggcgatgga
     4681 ggagctcggg cggaaatacc ccgaccggat cgcgatccgc gtggcgtacg acaacgcgct
     4741 ggcccacaag atcgaggcgg ggtcggacat gtacctgatg ccctcccggt acgagccgtg
     4801 cgggctgaac cagatctaca gcctgaagta cggaacggtc cccatcgtgc gggaaacggg
     4861 ggggctggcg gacaccgtga cggacgccga cgaggacccc gcggccggta ccgggttcac
     4921 cttccggcgc tacgaggcgg aggagttgaa gggcgccgtg acgagggcgt tggccgcgta
     4981 cgcggaccgt ccccgttggg acgggatc
//
LOCUS       DATGYW010000572         2787 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_320440, whole genome shotgun sequence.
ACCESSION   DATGYW010000572 DATGYW010000000
VERSION     DATGYW010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_320440"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..833)
                     /locus_tag="VK429_08035"
     CDS             complement(<1..833)
                     /locus_tag="VK429_08035"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLN91792.1"
                     /translation="MLLPGNGAVASTFRGLRHRNFRLWFFGQLTSLVGTWMQTIAQNW
                     LVYQLTGSARDLGLVNFVGAIPLVPLTLYAGAIADRFEKRKVIFWCQAAMMVLAFLLA
                     ALCWTGTVRFWHVLLLAFLLGAVQALDTPARQAFVVELVGREDLSNAIALNSGAFHAA
                     RVLGPAVAGVLIAVSGVAGAFFINGWSFLAVLFGLFLMDVALIRRTGAGHESAKDLLG
                     GVRYLRKERLPRAVVVLISLSALFAMPYYVLIPIYAREIFGRGAGGYGVLMSAAGVGA
                     VL"
     gene            complement(834..>2787)
                     /gene="glgB"
                     /locus_tag="VK429_08040"
     CDS             complement(834..>2787)
                     /gene="glgB"
                     /locus_tag="VK429_08040"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020466170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HLN91793.1"
                     /translation="LEITSGDGYRWTQHDPYAFGTVLTDFDIHLLSEGSHLAQYEKLG
                     SHVVDIGGIRGTAFAVWAPNAERVSVVCNFNHWDGRVHPMRNRGESGIWEIFLPGVVE
                     EEVYKYEIRSRGTGELLAKTDPFGFRFELPPRTGTIVCTIDGHKWGDAAWMEERPRRN
                     VLEAPMAVYEVHLGSWKRKEGEGGPYLTYRELADDLVPYVKGMGYTHIELLPVAEHPF
                     DGSWGYQVLGYFAPTSRHGPPDEFMEFVDRCHREGIGVIVDWVPAHFPRDAHGLARFD
                     GTHLYEHADPRMGEHRDWGTLIFNYGRREVANFLLSNALFWLDKYHIDGLRVDAVASM
                     LYLDYSRKPGEWIPNVHGGNENLEAIAFLKRMNELVHERHPGAITVAEESTAWPAVSR
                     PTYLGGLGFTLKWNMGWMHDMLSFIEKDPIHRKYHFGQLTFALLYAFHENFVLPFSHD
                     EVVHLKRSMLDKMPGDLWGKFANLRLLYAYMYAHPGKKLLFMGEEFAQWEEWDHDRPL
                     SWELLKWDTHQGVQRFVRDLNRIYRDVGALHEIDFRPEGFEWIDFRDVDNSVVSFLRR
                     GKDPDDAVVCVFNFTPTPREKYRVGVPWPGRYREALNSDAAAYGGSNAGNGGVIAAES
                     VPWMGHPHSVSLTLPPLGALFLLPGK"
BASE COUNT          485 a          914 c          953 g          435 t
ORIGIN      
        1 aggaccgcgc cgacccccgc cgcggacatg agaactccgt acccaccggc cccgcggccg
       61 aagatctccc tcgcgtagat ggggatcagc acgtagtacg gcatggcgaa aagggccgac
      121 agcgagatca ggacgacgac ggcccgcggc aggcgctcct tccggagata ccgcaccccg
      181 ccgagaaggt ccttcgcgga ttcgtgcccg gcgccggtgc ggcggatcag ggccacgtcc
      241 atcaggaaca ggccgaagag gacggcgagg aaactccatc cgttgatgaa gaaggcgccc
      301 gcgacgcccg agacggcgat gagcaccccg gcgacggcgg ggccgaggac gcgcgcggcg
      361 tggaacgccc cggagttgag ggcgatcgcg ttcgacaggt cctccctgcc caccagctcc
      421 acgacgaagg cctggcgggc gggggtgtcc agcgcctgca ccgccccgag gaggaacgcg
      481 aggaggagga cgtgccagaa gcgcaccgtc ccggtccagc agagggcggc gagcaggaac
      541 gcgagaacca tcatcgcggc ctggcaccag aagatcacct tgcgcttctc gaatcggtcc
      601 gcgatcgccc cggcgtagag ggtgagagga acgaggggga tcgccccgac gaagttcacg
      661 agcccgaggt cccgcgcgga accggtgagc tggtacacga gccagttctg ggcgatcgtc
      721 tgcatccagg tgcccaccag ggaggtgagc tggccgaaga accagaggcg gaagttgcgg
      781 tggcgcagcc cccggaacgt cgaggcgacc gcgccgttcc cgggcaggag catttatttc
      841 ccgggcagga ggaagagcgc gcccagcggg ggaagcgtga gggagacgga gtgggggtga
      901 cccatccacg gaacgctctc cgccgcgatg acgccgccgt tcccggcgtt gctcccgccg
      961 taggcggcgg cgtcgctgtt cagcgcctcg cggtatcgcc cgggccaggg gacgccgacc
     1021 cggtacttct ccctcggggt gggggtgaag ttgaagacgc agacgacggc gtcgtccgga
     1081 tccttcccgc ggcgaaggaa ggagacgacg ctgttgtcga cgtcccggaa gtcgatccac
     1141 tcgaagcctt cggggcggaa gtcgatctcg tggagcgcgc cgacgtcgcg gtagatgcgg
     1201 ttcaggtcgc ggacgaaccg ctgcaccccc tggtgggtgt cccacttgag cagctcccag
     1261 gagagcggcc ggtcgtggtc ccactcctcc cactgggcga actcctcccc catgaacagg
     1321 agcttctttc cggggtgggc gtacatgtag gcgtagagga ggcggaggtt ggcgaatttc
     1381 ccccacaggt cgcccggcat cttgtcgagc atcgagcgct tcaggtgcac cacctcgtcg
     1441 tgggagaagg ggaggacgaa gttttcgtgg aaggcgtaca gcagggcgaa ggtgagctgg
     1501 ccgaaatggt atttccggtg gatcggatcc ttctcgatga aggagagcat gtcgtgcatc
     1561 caccccatgt tccatttcag ggtgaacccg agcccgccga ggtacgtcgg ccgcgacacc
     1621 gccggccagg cggtcgactc ctccgccacc gtgatcgcgc cggggtgccg ctcgtggacc
     1681 agctcgttca tccgcttgag aaaggcgatc gcctcgaggt tctcgttccc cccgtggacg
     1741 ttcgggatcc actcgcccgg tttccgggag tagtcgaggt agagcatcga cgccacggcg
     1801 tccacccgca agccgtcgat gtggtacttg tcgagccaga agagggcgtt cgacaggagg
     1861 aagttcgcca cctcccggcg tccgtagttg aagatcagcg tcccccagtc gcggtgttcc
     1921 cccatgcgcg ggtcggcgtg ctcgtagagg tgggtcccgt cgaaccgcgc cagcccgtgg
     1981 gcgtcgcggg gaaagtgggc cggtacccag tcgacgatca ctccgatccc ttcccggtgg
     2041 caccggtcga cgaactccat gaactcgtcc ggggggccgt gtcgggaagt cggcgcgaag
     2101 taccccagca cctgataccc ccacgaaccg tcgaacggat gctccgccac cgggagaagc
     2161 tcgatgtggg tataccccat ccccttgacg tagggcacga ggtcgtcggc caactcccgg
     2221 tacgtcaggt acggcccccc ctctccctcc ttccttttcc aactgccaag gtggacctcg
     2281 tacaccgcca tgggggcttc gaggacgttt cgccgcggcc gttcctccat ccacgccgcg
     2341 tcgccccact tgtgaccgtc aatggtgcag acgattgttc ccgtccgcgg cgggagctcg
     2401 aaccggaagc cgaacgggtc ggtcttggcc agcagttcac ccgtgccccg ggagcggatc
     2461 tcgtacttgt agacctcctc ctcgacgacg ccggggagga agatctccca gatcccggac
     2521 tctccgcggt ttcgcatcgg gtgaacgcgg ccatcccaat ggttgaaatt gcagaccacg
     2581 gagacgcgct ccgcgttggg cgcccaaacc gcgaacgccg tgccccggat ccctccgatg
     2641 tcgacgacat ggctccccag cttctcgtac tgcgccaggt ggcttccttc ggagaggaga
     2701 tggatgtcga agtcggtgag gaccgttccg aacgcgtagg ggtcgtgctg cgtccaccgg
     2761 tagccgtcgc cgctggtgat ttcgagc
//
LOCUS       DATGYW010000573         1622 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_89190, whole genome shotgun sequence.
ACCESSION   DATGYW010000573 DATGYW010000000
VERSION     DATGYW010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1622
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89190"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..789)
                     /locus_tag="VK429_08045"
     CDS             complement(<1..789)
                     /locus_tag="VK429_08045"
                     /inference="COORDINATES: protein motif:HMM:NF024587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytidylate kinase-like family protein"
                     /protein_id="HLN91794.1"
                     /translation="MAIVTISREGGSGGEDIAKALAKRLQYEFVSKESIHKEIEEHGK
                     KWLGWVAIEQLDEHAPTIWERYDRTYAAYLALVAHCVYKNALRNNVVILGRGGNYLLE
                     SVPYALRVRITASAEYRVRTFCDRFGVDEEGARKMLMHSDHERFIFLKRAYHKEWVNP
                     DDYDLTLNSGHMGFDELITLIVDEIPARDRLFTPEAEEILRRLELAARVKADIITRFS
                     MFIPTLEVHHDGSAIVLRGVCLFTKEKMHELMETAIRSAGSTRVR"
     gene            complement(964..1038)
                     /locus_tag="VK429_08050"
     tRNA            complement(964..1038)
                     /locus_tag="VK429_08050"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1004..1006),aa:Val,seq:cac)
     gene            1269..1364
                     /locus_tag="VK429_08055"
     tRNA            1269..1364
                     /locus_tag="VK429_08055"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1304..1306,aa:Sec,seq:tca)
BASE COUNT          291 a          513 c          457 g          361 t
ORIGIN      
        1 gcgtaccctg gtggatcccg ccgaacggat cgcggtttcc atcaattcgt gcatcttttc
       61 cttcgtgaac aggcagacgc cgcgaaggac gatggccgat ccgtcatggt ggacttccaa
      121 tgtggggatg aacatggaga aacgggtgat gatatccgcc ttgacccgcg ccgccagttc
      181 cagccggcgc agtatctcct cggcttctgg agtaaaaagt ctgtcccgtg cggggatttc
      241 gtccacgatc agggtgatca gttcgtcgaa gcccatgtgg ccagaattca acgtcaggtc
      301 gtaatcgtcg gggttgaccc attccttgtg gtacgctctt ttcaggaaga tgaaccgttc
      361 atggtcgctg tgcatcagca ttttccgggc cccctcctca tcgacgccga accggtcgca
      421 gaaggtcctg acccgatact ccgcggacgc tgtgatacgg acccgcaggg cgtaggggac
      481 gctttccagg agatagttgc cgccccgtcc caggatgacc acgttgttcc tgagggcgtt
      541 cttgtagacg caatgtgcca ccagcgccag gtaggcggca tacgtccggt cgtaccgttc
      601 ccagatggtg ggagcgtgct cgtccagctg ctcgatcgcg acccaaccca gccacttctt
      661 cccgtgctct tcgatttcct tgtgaatcga ttccttgctg acgaattcgt actggagcct
      721 tttcgctaag gccttggcaa tatcctcgcc cccgcttccg ccttctctcg atatcgtcac
      781 gatggccatg gctgctccct tcccggcggt tcgcgatgat cacgaacgtc cttttgaaat
      841 acgaatccga ataccattat attttaagat ggcggccttt gggaacatgg aaaacgaggg
      901 ccggcccgaa aaacaggaac cggggtctcc cgtgaaggga agccccggtc cgaatctttc
      961 cggtggtggg cgctacagga cttgaacctg tgacttccac cgtgtgaagg tggcactcta
     1021 ccgctgagtt aagcgcccca ggaagttcct attgtacctt cccgcgggat ccgttcaatg
     1081 ggaatttcgc cgggcccgtt ggaaactttc acgcccttca tgctctccgc cgtgagaaga
     1141 atccccgccg ccaccgtcac aaccgtgaga atacgccgca tcacaggctc ctttccccgt
     1201 ccgggaaggt ctgcatttgg tgtattatcg gcaggaaagg cgcgaaaccc ggcatgcgcc
     1261 cggtggacgg aagcggatgg ggcgctggtg gcccccccgg acttcaaatc cggtcgggag
     1321 gcggaaacgt ctccggtggg ttcgattccc tcacgcttcc gccatgcttc atcccaccga
     1381 gggagtacct gcacccgcag tagctctggc gataaagccc cagctccctg ctggcgcgta
     1441 cgcttttcag gtacccgtcc ccctttttca tgtccgcctc gacgaagcgt atcccggagc
     1501 gttccccctc ctcgcgtcca acgcggttca ccatcgcggc gtccttcttc gggctgacgg
     1561 tcaggaccgt gccgaaggcg ggcatcccga gctccgccgc ttttttcgcg gtctcccgaa
     1621 gg
//
LOCUS       DATGYW010000574         1641 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_477478, whole genome shotgun sequence.
ACCESSION   DATGYW010000574 DATGYW010000000
VERSION     DATGYW010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477478"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..1266
                     /gene="glyA"
                     /locus_tag="VK429_08060"
     CDS             4..1266
                     /gene="glyA"
                     /locus_tag="VK429_08060"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011416100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HLN91795.1"
                     /translation="MSLLRETDPEIYDIIRKETERQAYKLELIASENFVSEAVLEATG
                     SVLTNKYAEGYPGKRYYGGCEFVDQAESLAIERAKKIFGAAHVNVQPHAGSQANMAVY
                     FAVMNPGDTMLGMNLSHGGHLTHGSPVNFSGKLYNVIPYGVREDTETIDYDQVRDLAL
                     KHRPKLIVVGASAYPRTIDFPAFRRIADEAGCMVMADIAHIAGMVAAGLHPSPVPHCE
                     FVTTTTHKTLRGPRSGLIMCREEFAKKLDSAIFPGSQGGPLMHVIAAKAVALKEAMTP
                     AFKEYQAQIVRNAAAMAKTLLARGYRLVSGGTDNHLMLVNLKDTPLTGKEGEAALEHV
                     GITVNKNTVPFETRSPFITSGIRIGTPAVTTRGMKEKEMERIGNLIADVLAAPSDASV
                     QRRVETEVRALCDAFPLYAARLGAYAKG"
     gene            1317..>1641
                     /locus_tag="VK429_08065"
     CDS             1317..>1641
                     /locus_tag="VK429_08065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009015481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCMP deaminase family protein"
                     /protein_id="HLN91796.1"
                     /translation="MDMAKLAARRSSCLRRAVGAVLVKDRRLLSTGYNGVPSGVTHCE
                     VVGCLRERLKVPSGERHELCRGLHAEQNAIIQAAYHGVSIRGADLYCTNLPCIICAKM
                     LINAGV"
BASE COUNT          294 a          561 c          550 g          236 t
ORIGIN      
        1 cccatgtcct tactgagaga gaccgacccc gagatctacg acatcatccg caaggagacc
       61 gagcggcagg cgtacaagct cgagctgatc gcctccgaga acttcgtgag cgaggcggtc
      121 ctcgaggcca ccgggtccgt gctgacgaac aagtacgccg aggggtatcc gggaaagcgg
      181 tactacggcg ggtgcgagtt cgtggaccag gcggagtcgc tggcgatcga gcgggcgaag
      241 aagatcttcg gcgccgcgca cgtcaacgtg cagccccacg ccggctccca ggcgaacatg
      301 gccgtctact tcgccgtgat gaacccgggc gacacgatgc tggggatgaa cctctcccac
      361 ggcggccacc tgacccacgg gagccccgtg aacttctcgg ggaagctcta caacgtgatc
      421 ccctacggcg tgcgggagga caccgagacg atcgactacg accaggtccg cgacctcgcc
      481 ctgaagcatc gcccgaagct gatcgtcgtg ggcgcctccg cctacccccg gacgatcgac
      541 ttcccggcgt tccgcaggat cgccgacgag gcgggctgca tggtgatggc cgacatcgcg
      601 cacatcgccg gcatggtcgc cgccgggctg caccccagcc cggtcccgca ctgcgaattc
      661 gtcacgacca cgacccacaa gacgctgcgg ggaccccgct cggggctgat catgtgccgg
      721 gaggagttcg cgaagaagct cgattccgcc atcttccccg ggagccaggg cggtcccctg
      781 atgcacgtga tcgccgcgaa ggccgtcgcg ctgaaggagg cgatgacccc cgccttcaag
      841 gagtatcagg cccagatcgt ccgcaatgcg gcggcgatgg cgaagaccct cctcgcccgc
      901 gggtaccggc tcgtctccgg gggaacggac aaccacctga tgctggtcaa cctgaaggac
      961 acccctctga cggggaaaga gggggaagcg gcgctggagc atgtcgggat cacggtgaac
     1021 aagaacacgg tccccttcga aacccggagc ccgttcatca ccagcgggat tcgcatcggg
     1081 acgccggcgg tcaccacccg cgggatgaag gaaaaggaga tggaacggat cggcaacctg
     1141 atcgccgacg tgctggccgc gccttcggac gcctccgtgc agcggcgggt ggagacggag
     1201 gtgcgcgcgc tgtgcgacgc cttccctctc tacgccgcgc gtctcggggc gtacgcgaag
     1261 gggtgatccc gttgccggcg gcggcgcgga cccgtcccga ctgggacacc tacttcatgg
     1321 acatggcgaa gctcgccgcc aggcgctcgt cgtgcctgcg acgggccgtc ggcgcggtcc
     1381 tggtgaagga ccggcgcctc ctctccacgg gatacaacgg cgttccctcc ggggtcacgc
     1441 actgcgaggt cgtggggtgc ctccgggagc ggctcaaggt tccctcgggg gaacgccacg
     1501 agctttgccg cggcctgcac gccgagcaga acgcgatcat ccaggccgcg taccacggcg
     1561 tctcgatccg gggcgccgac ctgtactgca cgaaccttcc ctgcatcatc tgcgcgaaga
     1621 tgctgatcaa cgccggcgtc c
//
LOCUS       DATGYW010000575         1525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_518296, whole genome shotgun sequence.
ACCESSION   DATGYW010000575 DATGYW010000000
VERSION     DATGYW010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_518296"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VK429_08070"
     CDS             <1..244
                     /locus_tag="VK429_08070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91797.1"
                     /translation="DGVRKLLSAELVLADVSPEEARRRYPGAVLSLRIRRAREETEEL
                     QEKVRGASGEEASLLFDRVVAAKRELERLESERRSR"
     gene            260..>1525
                     /locus_tag="VK429_08075"
     CDS             260..>1525
                     /locus_tag="VK429_08075"
                     /inference="COORDINATES: protein motif:HMM:NF016433.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLN91798.1"
                     /translation="MARRKQPDGIDGLVEKGRAQGYVTYDELNSALPPDVLTGDQIED
                     VMAIFGANAIEVVDDFQKVPLPPGANLLIGEEEAGEEEEAAVEEEPAVEEEEFGYPGG
                     VKGNDPVRLYLKEMGAIHLLNREGEVSLAKRIEDGEREIVSAVKGCSIALADLFKVGE
                     KLKAGEVQVRDVIKDLDEDSTEEEEKAALDKVLRIVQRIRKTHLSALEIEQRLRKGGL
                     KEKDRQALKSRYASLNDRVVESIQEIHLKERQIEVIGDKIRRFADRVEAAESRIRDCC
                     ARVKLTEKELSRLFKEIHAKKDGLAKAASKHHVKKDKLLEIEETLKESRATIRKVERE
                     AGLSAGQIQETLAAIERGERKVREAKRELVEANLRLVVSIAKKYTNRGLQFLDLIQEG
                     NIGLMKAVDKFEYRRGYKFSTYATWWVRQA"
BASE COUNT          320 a          429 c          568 g          208 t
ORIGIN      
        1 ggacggcgtg cggaaacttc tgtccgccga gctcgtgctg gcggacgttt ccccggagga
       61 ggcgcgcagg cgctacccgg gggcggtcct ttccctccgg atccgccggg cgcgggagga
      121 gaccgaggag ttgcaggaga aggtgagggg tgcgtcaggc gaggaggctt cgctgctctt
      181 cgaccgggtg gtggccgcga agcgtgagct ggagcgactg gaatcggaac gcagatcgcg
      241 atgacgaggt gaagcgcaga tggcgaggcg gaaacagccg gacggcatcg acgggctggt
      301 ggaaaaaggg cgggcgcagg gatacgtcac ctacgatgag ctgaacagcg cccttccgcc
      361 cgatgtacta acgggggacc agatcgagga tgtcatggcg atcttcggcg cgaacgcgat
      421 cgaggtggtg gacgactttc agaaagtccc cctccctccc ggcgccaacc tcctgatcgg
      481 cgaagaggag gccggggagg aggaagaggc ggccgtcgag gaagagcccg ccgtcgagga
      541 ggaggagttc ggataccccg gcggggtgaa ggggaacgac cccgtgcgcc tctacctcaa
      601 ggagatgggc gcgatccacc ttctcaaccg cgagggcgag gtcagcctcg cgaagcggat
      661 cgaggacggg gagcgcgaga tcgtctccgc ggtgaagggt tgctccatcg cgcttgccga
      721 cctgttcaag gtcggcgaga agctcaaggc gggcgaggtg caggtcaggg acgtcatcaa
      781 ggatctcgac gaggactcca cggaagagga ggagaaggcg gcgctcgaca aggtgctgcg
      841 catcgtccaa aggatccgga aaacccacct gtccgccctg gagatcgagc agcgcctccg
      901 gaagggcggc ctgaaggaaa aggaccggca ggcgctgaaa tcccgctacg cctccctcaa
      961 cgaccgcgtg gtggagtcga tccaggagat ccacctcaag gaacgccaga tcgaggtcat
     1021 cggcgacaag atccgccggt ttgccgaccg ggtcgaggcg gcggagagcc gcatccgcga
     1081 ctgctgcgcg cgggtgaagc tcacggagaa ggagctttcc cgcctcttca aggagatcca
     1141 tgcgaagaag gacggcctcg cgaaggccgc ctcgaagcac cacgtaaaga aggataagct
     1201 cctcgagatc gaggagaccc tcaaggagtc gcgggccacg atccggaagg tggagcggga
     1261 ggcgggactt tccgccgggc agatccagga gacgctcgcc gccatcgagc ggggggagcg
     1321 gaaggtccgc gaagccaagc gggagctggt cgaggcgaac ctgcggttag tggtctcgat
     1381 cgctaagaag tacaccaacc gggggctcca gttcctggat ctcatccagg aggggaacat
     1441 cggcctgatg aaggcggtgg acaagttcga gtaccgccgg ggctataagt tctcgaccta
     1501 tgccacgtgg tgggtgcgac aggcc
//
LOCUS       DATGYW010000576         1621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_423776, whole genome shotgun sequence.
ACCESSION   DATGYW010000576 DATGYW010000000
VERSION     DATGYW010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423776"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1157)
                     /gene="hemA"
                     /locus_tag="VK429_08080"
     CDS             complement(<1..1157)
                     /gene="hemA"
                     /locus_tag="VK429_08080"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HLN91799.1"
                     /translation="MSEIVIVGLNHRTAPVEVRERLAFPADTVGHALRGLRERDGISE
                     GVILSTCNRVEVCVLSDEGYKGVEHVKEFLSGFHGVPIGELSDHLYHHLGEEAVRHLF
                     RVSSSLDSMVLGEPQILGQVKDAYGYACEFKTIGPVLDKFFTKAFSVAKRVRTETRVA
                     NSAVSVSYAAVELAKKILGDLPDKTVMLIGAGEMCELAARHLLSAGAKGILVTNRTFE
                     RAGLLAEEFEGTAVRFEELATHLKRADIILSSTGAPHFILKREDVEAVIRIRRNRPMF
                     FIDMAVPRDIDPDANEIDNVYVYDIDDLNNVIETNLEDRQREASLAEEIVVAEVAGFR
                     RWLDSQQVTPTIVSLRRKFDEVRQAEVAKALSALGTADPKTRKVVESLAAS"
     gene            complement(1165..>1621)
                     /gene="ccsB"
                     /locus_tag="VK429_08085"
     CDS             complement(1165..>1621)
                     /gene="ccsB"
                     /locus_tag="VK429_08085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006002917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HLN91800.1"
                     /translation="WLPVHVILLFFGNAVFAVAFGAGVMYLLMEKELKRKKLGAIFKR
                     LPSLDVLDDINYRCLTIGFPLLTLGIITGSIWAEYAWGSYWSWDPKEVWSLITWMLYA
                     ALLHFRMTVGWRGRKAAIFAIVGFCAILFTFLGVNLLLSGLHTYTNLSG"
BASE COUNT          283 a          550 c          521 g          267 t
ORIGIN      
        1 atcgaggccg cgagcgactc gaccaccttc ctcgtcttcg ggtcggccgt gcccagcgcg
       61 gagagcgcct tggcgacctc cgcctgccgc acctcgtcga acttcctccg cagggagacg
      121 atcgtcgggg tcacctgctg cgaatcgagc catcgccgga agcccgccac ctcggcgacg
      181 acgatctcct cggccagcga agcctcgcgc tgccgatcct cgaggttcgt ctcgatcacg
      241 ttgttcaggt cgtcgatgtc gtagacgtag acgttgtcga tctcgttggc gtccgggtcg
      301 atgtcgcgcg gcaccgccat gtcgatgaag aacatcggcc ggtttctccg gatccggatg
      361 accgcctcca cgtcttcccg cttcaggatg aagtgcgggg cgccggtcga ggagaggatg
      421 atgtcggcgc gcttcaggtg ggtggccagc tcctcgaagc gaacggccgt gccttcgaac
      481 tcctcggcga ggagaccggc gcgctcgaag gtccggttcg tgacgaggat ccccttggcg
      541 ccggcggaaa gcaggtgccg cgccgccagc tcgcacatct cccccgcccc gatcagcatc
      601 accgtcttgt ccgggaggtc gcccaggatc ttcttcgcaa gctccacggc ggcgtacgag
      661 accgagacgg cgctgttcgc gacccgcgtt tcggtgcgca cccgcttggc gaccgaaaac
      721 gccttcgtga agaacttgtc gaggaccggc ccgatcgtct tgaactcgca ggcgtacccg
      781 taggcgtcct tcacctgccc caggatctgc ggctccccga gcaccatcga gtcgaggctg
      841 ctggagacgc ggaacaggtg ccgcaccgcc tcttccccga ggtggtggta gaggtggtcc
      901 gacagctctc cgatcgggac gccgtggaac ccggagagga actccttcac gtgctccacg
      961 cccttgtatc cctcgtccga gagaacgcag acctcgacgc ggttgcaggt ggagaggatg
     1021 actccctcgg agatgccgtc gcgctcccgc aatccccgga gggcgtgccc caccgtgtcc
     1081 gccgggaacg ccaggcgctc ccggacctcc accggcgcgg tccggtggtt caagccgacg
     1141 atgacgatct cgctcatgcg ccgatcagcc ggaaaggttc gtgtaggtgt gcagacccga
     1201 caggagaagg ttcacaccga ggaaggtgaa caggatcgcg cagaacccga cgatggcgaa
     1261 gatcgccgcc ttgcggccgc gccagccgac ggtcatccgg aagtggagca gcgcggcgta
     1321 gagcatccac gtgatgaggg accagacctc tttcgggtcc cagctccagt aggagcccca
     1381 ggcgtactcc gcccagatcg atcccgtgat gatccccagg gtcagcagcg ggaaaccgat
     1441 cgtcaggcag cggtagttga tgtcgtccag cacgtcgagc gacggcagcc gcttgaagat
     1501 cgcgcccagc ttcttccgct tcagctcctt ctccatcagc aggtacatga cccccgcgcc
     1561 gaacgccacg gcgaaaacgg cgttgccgaa gaacaggagg atcacgtgga cggggagcca
     1621 g
//
LOCUS       DATGYW010000577         2569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_354378, whole genome shotgun sequence.
ACCESSION   DATGYW010000577 DATGYW010000000
VERSION     DATGYW010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2569
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354378"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..370
                     /locus_tag="VK429_08090"
     CDS             <1..370
                     /locus_tag="VK429_08090"
                     /inference="COORDINATES: protein motif:HMM:NF015559.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HLN91801.1"
                     /translation="LNALRANLAALEAERAVCLPLDFREAVRRLSAKGRTFDLVFLDP
                     PYGKGMVGLSAGLLSRAGILAPGAIVVAERSSRDPVEELPAEWRERSDRRYGDTRVTL
                     YDIPDPRGQASRGGRKQENR"
     gene            367..861
                     /gene="coaD"
                     /locus_tag="VK429_08095"
     CDS             367..861
                     /gene="coaD"
                     /locus_tag="VK429_08095"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017548443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HLN91802.1"
                     /translation="MRTLAVYPGSFDPPTNGHLDIIERSSRVFSRVIVAVAVNLRKNA
                     FFTPAERVRMLKRLTRTMGNVEVTSFRGLLVDFARAQEAHILVRGIRAISDFEYEYQM
                     AHMNRKLDQEIDTVIMMTGERHSAISSNIVKEIAQFGGKIDDLVPPLVRDILLSKLKG
                     AKRK"
     gene            858..2054
                     /locus_tag="VK429_08100"
     CDS             858..2054
                     /locus_tag="VK429_08100"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011417500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HLN91803.1"
                     /translation="MKLAKRVGRIQPSPTLAITNKAKQMKAQGIDVVGFGAGEPDFDT
                     PDHIKAVAKKALDEGYTKYTPVPGSPELKDAIIAKLKRDNGLEYKRENIIVSLGAKHS
                     IFNVACAFLEAGDEVIIPAPYWVSYPDIALLADATPVIVEAKQATGFKITPAQLEKAI
                     TKKTKLFVLNSPSNPTGAAYSKGELEALAQVIVKKDITVLSDEIYEKLVYDGFQFTSF
                     ASLGEEVKKRTILVNGLSKSHSMTGWRIGYVAAEKDLVAAMNNIQSQSTSNPVSFCDK
                     ASIEALNGPQDFQKAWVAEFDRRRRYITERLNKMPGVSCLLPQGAFYVFPNFSGCYGK
                     KTPAGKVIDSSSALSAYLLDDHKVAAVPGIAFGDDACQRLSYAMSMKNIEKGIDRIEQ
                     AVKALA"
     gene            complement(2109..2528)
                     /locus_tag="VK429_08105"
     CDS             complement(2109..2528)
                     /locus_tag="VK429_08105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002624617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HLN91804.1"
                     /translation="MPLAGRNPLPTADVVIEVGDRVVLVRRKYPPPGWAIPGGFVEVG
                     ETVETAAVREALEETGLRVTLTALLGVYSDPARDPRHHTISTVYIGRAEGAPAGGDDA
                     AEARLFGEGDLPSPLAFDHARILADYFRFKKTGKKPL"
BASE COUNT          474 a          796 c          886 g          413 t
ORIGIN      
        1 gctcaacgcg ctgagggcga acctcgcggc gctggaggcg gaacgcgcgg tctgtctccc
       61 cctcgacttc cgggaggcgg tccggaggct ctccgcgaag gggaggacgt tcgatctcgt
      121 gttcctcgac cccccgtacg gcaaggggat ggtcggcctc tcggcggggc tgctttcccg
      181 cgccgggatt ctcgcccccg gggctattgt ggtggcggag cggtcctcac gggaccccgt
      241 ggaggagctc ccggcggaat ggagggagcg gtccgaccgt cggtacggcg atacacgggt
      301 cactttgtac gacatccccg acccccgggg gcaggcgtcg cggggtggga ggaaacagga
      361 gaaccgatga ggactctggc cgtctacccc ggatcgttcg atccccccac gaacggacat
      421 ctggacatca tcgagcggtc ctccagggtc ttctcccggg tgatcgtcgc ggtggcggtg
      481 aacctcagga aaaacgcctt cttcaccccc gcggagcgcg tgcggatgct gaagcggttg
      541 accagaacga tggggaacgt agaggtcacg tcgttccgcg gtctgctggt ggatttcgcc
      601 cgcgcgcagg aggcgcacat cctggtgcgg gggatacggg cgatctcgga cttcgagtac
      661 gagtaccaga tggcccacat gaaccggaag ctggaccagg agatcgacac ggtgatcatg
      721 atgaccgggg agcgccactc cgcgatcagc tcgaacatcg tcaaggagat cgcccagttc
      781 ggcggtaaga tcgacgacct cgtgcctcct ttggtgcggg acatcctgtt gagtaagctg
      841 aaaggagcga agagaaaatg aagctcgcga agagagtggg gaggatccag ccgtcgccga
      901 cgctggcgat cacgaacaag gcgaagcaga tgaaggcgca ggggatcgac gtggtcggat
      961 tcggggccgg ggagccggat ttcgacacgc cggaccacat caaggccgtc gccaagaagg
     1021 cgctggacga agggtatacg aagtacactc ccgtcccggg gtccccggag ctgaaggacg
     1081 cgatcatcgc gaaactgaaa agggacaacg ggctggagta caagcgggag aacatcatcg
     1141 tctccctcgg cgcgaagcac tcgatcttca acgttgcctg tgcgttcctc gaggccgggg
     1201 acgaggtgat catccccgcc ccgtactggg tttcctaccc ggacatcgcg ctgctggcgg
     1261 acgccacccc ggtgatcgtc gaggcgaagc aggccacggg gttcaagatc accccggcgc
     1321 agctggagaa ggcgataacg aagaagacga agctcttcgt gctgaacagc ccctccaacc
     1381 cgaccggggc ggcgtattcg aagggcgaac tcgaggcgct ggcccaggtg atcgtgaaga
     1441 aggacatcac cgtcctgtcg gacgagatct acgagaagct cgtgtacgac ggattccagt
     1501 tcacctcctt cgcctccctg ggcgaagagg tgaagaagcg cacgatcctc gtgaacggtc
     1561 tttccaagtc gcattcgatg accgggtggc ggatcgggta tgtcgcggcc gagaaggacc
     1621 tcgtggcggc gatgaacaac atccagagcc agagcacgag caaccccgtg tcgttctgcg
     1681 acaaggcgtc catcgaggcg ctgaacggac cgcaggactt ccagaaggcg tgggtcgccg
     1741 agttcgaccg gcggcgccgc tacatcaccg aacggctcaa caagatgccg ggcgtatcgt
     1801 gcctgcttcc gcagggggcg ttctacgtct tcccgaactt ctccgggtgc tacgggaaga
     1861 agactcccgc gggcaaggtg atcgacagct cctccgccct gtcggcgtac ctgctcgacg
     1921 atcacaaggt ggcggcggtc cccgggatcg cgttcggcga cgacgcgtgc cagcgtctct
     1981 cctacgccat gtccatgaag aacatcgaga aggggatcga ccggatcgag caggccgtca
     2041 aggccctcgc gtaatccttc gggcggccct gcggggagct gcttcctccc tcagggccgc
     2101 cgatcatctc agagcggctt tttgcccgtt ttcttgaacc ggaagtagtc cgccaggatc
     2161 ctcgcgtggt cgaaggcgag gggggagggg aggtcgccct cgccgaaaag tcgcgcctcg
     2221 gcggcgtcgt cgccgcccgc gggggcgcct tccgcccgcc cgatgtagac cgtcgagatc
     2281 gtgtggtggc gcgggtcgcg ggccgggtcg gagtagacgc ccagcagcgc ggtgagggtc
     2341 acgcgcaggc ccgtctcctc gagtgcctcc cggacggccg cggtttcgac ggtttcaccg
     2401 acctcgacga acccgccggg gatcgcccac cccggggggg gatatttccg ccggaccagg
     2461 acgacgcgat cgcccacctc gatgacgacg tcggcggtgg ggaggggatt gcggcctgcc
     2521 agtgggattc ctccagcctc ccggacccat cccgggcgac gatttgtgc
//
LOCUS       DATGYW010000578         2196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_197089, whole genome shotgun sequence.
ACCESSION   DATGYW010000578 DATGYW010000000
VERSION     DATGYW010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197089"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..435)
                     /locus_tag="VK429_08110"
     CDS             complement(<1..435)
                     /locus_tag="VK429_08110"
                     /EC_number="4.2.1.53"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050151 - oleate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oleate hydratase"
                     /protein_id="HLN91805.1"
                     /translation="MPRIVIIGAGLSGLATAHYLVNSLSAAGKEAEILLLEADAVPGG
                     KMRTIKQDGFSMEWGPNGFLTNKPHGMELVKDLGIGNRLARSSDLARKRFILSGGKLH
                     RLPETPPEFFKSQLLSLPGRLRILWEPFASGPPADVDESLGEF"
     gene            complement(435..1400)
                     /gene="hemH"
                     /locus_tag="VK429_08115"
     CDS             complement(435..1400)
                     /gene="hemH"
                     /locus_tag="VK429_08115"
                     /inference="COORDINATES: protein motif:HMM:TIGR00109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HLN91806.1"
                     /translation="MPVEGPLTGVVLLNMGGPDSLNAVRPFLARLFSDKELIRLPAAK
                     VTQPLFAWIVSGLRARKVRRYYEEIGGGSPIAAITERQRFALEEALRTTGRFKVYTGM
                     RYWYPLAKHAALEMKEDGVARAIALPLYPHFCSATTGSSFSDLRRWMKWAGCSCPLTE
                     IRSYPEHPKYVAALVETVASTLRVADRDGMFLLFSAHGVPQSLIDGGDPYRSETERTV
                     AAVMRSFPDLPHGISYQSKVGPTAWLPPDTVSEVTRLAREGVKTLVVVPVSFVSEHIE
                     TLHELDVRLAAHARQAGIQSFLRAPALNDAPLFIAALKDLVLGAV"
     gene            complement(1427..>2196)
                     /locus_tag="VK429_08120"
     CDS             complement(1427..>2196)
                     /locus_tag="VK429_08120"
                     /inference="COORDINATES: protein motif:HMM:NF013381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase family protein"
                     /protein_id="HLN91807.1"
                     /translation="GKGPLLGKAVQTRRDVDSLIVPDPEEKVPFVMEAIRVLRKALEG
                     KVPLIGFSGAPFTLASYIVEGGTSKNFIQLKKLMYQAPDVYRSLMNKIAKTVILYLNA
                     QIAAGAQAVQIFDTWAGVLTPGDYEEYALPYTRQVVAGLNRKGVPVIHFANDCATLLT
                     AIKTLAIDVVGVDWRIPLDVAAMVVGPEKALQGNMDPTMLFHAPEKIDECVRDVLRRG
                     EKASSHIFNLGHGILPPTNPEHAIAMVEAVHRFGRKV"
BASE COUNT          361 a          747 c          736 g          352 t
ORIGIN      
        1 gaattccccg agcgactcgt cgacgtccgc gggcgggccc gaggcgaacg gctcccacag
       61 gatccgcaga cggccgggaa gggagagcag ttgcgacttg aaaaactccg gcggcgtctc
      121 ggggaggcgg tgcagcttcc cgccggagag gatgaaccgc ttgcgggcga ggtcggagga
      181 gcgggcgagg cgattcccga tgcccaggtc cttcaccagc tccatgccgt gcggcttgtt
      241 cgtgaggaag ccgttcggcc cccactccat ggagaagccg tcctgtttga tcgtgcgcat
      301 cttcccgccc gggaccgcgt ccgcctcgag cagcaggatc tcggcctcct tccccgcggc
      361 ggaaagcgag ttcaccagat agtgcgccgt ggccagcccc gaaaggccgg ccccgatgat
      421 gacgatacga ggcatcagac cgctcccagt acgaggtctt tcaacgcggc gatgaacagc
      481 ggcgcgtcgt tcagcgcggg cgcccgcagg aacgattgta tacccgcctg ccgcgcgtgg
      541 gcggccaggc gcacgtccag ctcatgaagc gtttcgatgt gctccgacac gaagctcacc
      601 gggacgacga ccagcgtctt caccccctcc cgcgcgagtc gcgtcacctc ggagacggtg
      661 tcggggggga gccacgccgt cggtcccacc ttgctctggt acgagatccc gtgcggcagg
      721 tcgggaaagg agcgcatcac cgccgcgacg gtgcgctccg tctccgaccg gtacggatcc
      781 cccccgtcga tcaacgactg cggaaccccg tgggcgctga agaggagaaa catcccgtcc
      841 cggtccgcga cccggagcgt gctcgcgacc gtctctacga gggctgcgac gtacttcggg
      901 tgttccggat aggagcggat ctccgtcaac gggcaggagc accccgccca cttcatccag
      961 cggcgcaggt cggaaaaact cgaccctgtg gtggcggagc agaagtgcgg gtacaggggg
     1021 agcgcgatcg cccgcgccac gccgtcctcc ttcatctcca gcgccgcgtg tttcgcgagg
     1081 gggtaccagt accgcatccc cgtgtacacc ttgaagcgcc ccgtcgtgcg caacgcttcc
     1141 tcgagggcga accgctggcg ctccgtgatc gcggcgatgg gcgatccccc gccgatctcc
     1201 tcgtagtacc ggcggacctt ccgggcgcga agccccgaca cgatccaggc gaagagcggc
     1261 tgcgtgacct ttgctgccgg caggcggatc agttccttat cggagaagag acgcgcgaga
     1321 aagggacgga cggcattcag ggagtcggga cctcccatgt tcaggaggac gacgccggtg
     1381 agaggtcctt cgacgggcac gcgcgggccg ttgccggaag cgccgctcag accttccggc
     1441 cgaaacggtg gaccgcctcc accatcgcga tcgcgtgctc cgggttggtg ggcggaagga
     1501 ttccgtgccc gaggttgaag atgtgggagg acgccttctc gccgcgccgc aggacgtccc
     1561 gaacgcattc gtcgatcttc tccggtgcgt ggaagagcat cgtcgggtcc atgttcccct
     1621 gcagcgcctt ctccgggccg acgaccatcg ccgccacgtc gagcgggatc cgccagtcca
     1681 cgccgaccac gtcgatcgcc agcgtcttga tggccgtgag cagcgtggcg cagtcgttcg
     1741 cgaagtggat cacggggacc cccttccggt tcaggccggc gacgacctgg cgggtgtacg
     1801 ggagggcgta ctcctcgtag tcccccgggg tcagcacccc cgcccacgtg tcgaagatct
     1861 gcaccgcctg cgcgcccgcg gcgatctggg cgttgaggta caggatcacc gtcttcgcga
     1921 tcttgttcat cagggaccgg tatacgtccg gcgcctggta catcagcttc ttcagctgga
     1981 tgaagttctt cgaggtcccc ccctccacga tgtaggaggc gagtgtgaac ggggcgcccg
     2041 agaaaccgat cagcggcacc ttcccttcga gcgccttgcg caggacgcgg atcgcctcca
     2101 tcacgaaggg gaccttctcc tcggggtcgg ggacgatgag ggaatcaacg tcgcgccggg
     2161 tctggaccgc cttccccagc agcggcccct tcccgt
//
LOCUS       DATGYW010000579         3296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_477676, whole genome shotgun sequence.
ACCESSION   DATGYW010000579 DATGYW010000000
VERSION     DATGYW010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3296)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3296
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477676"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1335
                     /locus_tag="VK429_08125"
     CDS             <1..1335
                     /locus_tag="VK429_08125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015435574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HLN91808.1"
                     /translation="PDKASVEKLYDNLDFQRAVQAYLLAIPAVSQAANRNEILKLGPA
                     NTTVPIFENRMDSKSIFLTPNTQTPYSWMWLDLRGGPLVLEAPPKVLGAINDMWYRWV
                     VDIGFTGPDKGKGGKFLILPPGYKGDIPDGYFVVKSPTFSLWAPWRSFVVDGDPKPGV
                     DLVKKHTRVYPLSDAANPPAMKFVNVSGKDFCTVAPADYAFWELLNQVVQEEPTESLD
                     QIRLGYYASIGIRRGKPFAPDARMKKILTEAAAVGDATARAIAFRTRDKEAYYYPNSA
                     WQLPFIGGYKFQTQPGALNLDGYIFYYFMATGVTPAMEEKMVGQGSQYAWAGVDAQGN
                     PLDGIKNYRLHLPPNIPVNNFWSIILYDDQARSMVQTDQQFPSVSSQQKDLVVNADGS
                     VDIYFGPKAPVRKANWIQTVPGKGWNTILRLYGPLEPWFNKTWRPGEIELQQ"
     gene            complement(1520..1595)
                     /locus_tag="VK429_08130"
     tRNA            complement(1520..1595)
                     /locus_tag="VK429_08130"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1560..1562),aa:Phe,seq:gaa)
     gene            complement(1614..2186)
                     /locus_tag="VK429_08135"
     CDS             complement(1614..2186)
                     /locus_tag="VK429_08135"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HLN91809.1"
                     /translation="MESSTGQYPYAGFWSRAAARVIDLLIIIAAFNLIYLADRLGADA
                     GLWTGMGLGEGGWTGAGISMANVLRGLFFLAFPVFYYVYLHAVYGQTFGKMALKIKVV
                     NEDGTPLDYRKAFLRWLGYFLCDLTFYIGYLWAAFDPRKQGLHDKVCKTLVVRTDVPF
                     PLPEALEPEAPVEAPPGDPASLDTGGSRPI"
     gene            complement(2190..2933)
                     /locus_tag="VK429_08140"
     CDS             complement(2190..2933)
                     /locus_tag="VK429_08140"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HLN91810.1"
                     /translation="MPTFFVDRKNISGDTAVLSGTEAGHMLRSLRLSVGDSFFAFDEE
                     GNRYRMRILEATSRSLRAEVLEMFPPEPPPDVAVSLFVGLPKADKMDFILEKATELGV
                     SRVIPFRSSRTIPRPDPADSRKRLARWERVALAAAKQCGSGRVPEVSGIVPYPEALRR
                     AAGHEGKIVFYEGEGTFSLKRVLSGMGAVRTVALVVGPEGGFSPDEVREALAAGCRCA
                     GLGSRILRVETAALAVLAMVMYHFEKEST"
     gene            complement(2953..>3296)
                     /locus_tag="VK429_08145"
     CDS             complement(2953..>3296)
                     /locus_tag="VK429_08145"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HLN91811.1"
                     /translation="RVLAVDTDPVAVDVAARNAVENGVADVFRAETTPLYAIPGTFDL
                     VLGNLIAEILIDMAPDLLRRTTPGGHLILSGILAEKSGWVVEEFVKNGAVLRAESVDG
                     QWTALLFRRED"
BASE COUNT          633 a         1051 c         1045 g          567 t
ORIGIN      
        1 ccggacaagg catccgtcga gaaactctac gacaacctcg acttccagcg tgccgtgcag
       61 gcttacctgc tggcaatccc ggccgtgagt caggcggcaa accggaatga gattctcaag
      121 ttgggcccgg ccaatacgac ggtgccgatc tttgagaaca ggatggattc gaagtcgatc
      181 ttcctgaccc ccaataccca aaccccctac agctggatgt ggctcgattt gcgcggaggt
      241 ccattggttc tggaagcccc gccgaaggtg ctcggggcga tcaacgacat gtggtatcgg
      301 tgggtcgtcg atatcgggtt cacgggtccc gacaaaggca agggcggtaa attcctgatt
      361 ctgccgccgg gctacaaggg tgacattcca gacggttact tcgttgtaaa gtcacccaca
      421 ttcagtctct gggccccatg gcgcagcttc gtcgtagacg gggacccgaa gccgggcgtt
      481 gatctggtga agaagcacac gcgggtctat cccctgtccg atgccgccaa cccgccggcg
      541 atgaagttcg taaacgtatc cggcaaggac ttttgcacag ttgcgccggc ggactatgcc
      601 ttctgggagc ttctcaacca ggtcgtccag gaggagccga ccgagtcgct cgaccagatc
      661 cgcctcggct actacgcctc gatcggaatc cggaggggca agccatttgc gccggatgcg
      721 cggatgaaga agatcctgac ggaagcggcc gcagtcgggg atgcgaccgc ccgagcgatc
      781 gcattccgca cccgggacaa ggaggcttac tattatccga acagtgcctg gcaactcccg
      841 ttcatagggg gttacaagtt ccagacacag ccgggtgccc tgaacctcga tggctatatc
      901 ttctactact tcatggccac cggcgtgaca ccggccatgg aagagaagat ggtcggtcaa
      961 ggttctcaat atgcgtgggc cggagtcgat gcccagggta acccgctcga tggcatcaag
     1021 aactacaggc ttcatctgcc gcccaacatc ccggtcaata acttctggtc gataatcctg
     1081 tacgacgacc aggcacgttc tatggtgcag accgaccagc agttcccgag cgtcagcagt
     1141 caacaaaagg accttgtggt aaacgcggac ggatcggtgg acatctactt cggccccaag
     1201 gccccggtgc gcaaggccaa ctggatccag accgtgcccg gcaaaggctg gaataccatt
     1261 cttcgcctct acggtccgct cgagccgtgg ttcaacaaga cgtggcgacc aggagagatc
     1321 gaactgcagc agtaacgcgc cggcacgctt cacggttacg tgtgtcgaaa cgacgttggg
     1381 cggcggtggc ggcgaacgga agggcggggg atttcccccg ccctttgcat ttctgcgctt
     1441 cccctcctgg cggtgcgcat gtggtacccg gcaaagaaaa aaggggctgc ggcggtaacc
     1501 gcaacccctt gatttgtaat ggtggcccct cccagaattg aactggggac acgaggattt
     1561 tcagtcctct gctctaccat ctgagctaaa gggccacctg acggagcgga ggattatatc
     1621 ggccggctcc ctccagtgtc aagggaggcc ggatctcccg ggggagcctc gaccggggct
     1681 tccggctcca gcgcctcggg aagcgggaac ggcacgtcgg tccgcacgac gagggtcttg
     1741 cacaccttgt cgtgcagccc ctgcttgcgg gggtcgaagg cggcccacag gtacccgatg
     1801 tagaacgtca ggtcgcacag gaaatacccc agccaccgaa ggaacgcctt ccggtaatcg
     1861 aggggcgtcc cgtcctcgtt caccaccttg atcttcaacg ccatcttgcc gaacgtctgc
     1921 ccgtacaccg cgtggagata gacgtaatag aaaacgggga acgcgaggaa gaagaggccg
     1981 cgaaggacgt tggccatcga gattcctgcg ccggtccagc ccccctcgcc cagccccatc
     2041 cccgtccaca gccccgcgtc ggcgccgagc cggtccgcca ggtagatcag gttgaacgcc
     2101 gcgatgatga tgagcaggtc gatgacccgg gccgcggcgc gcgaccagaa cccggcgtat
     2161 ggatattgcc ccgtcgatga ttccattcgc tacgtggact ccttttcgaa atggtacatc
     2221 accatggcga gaaccgcgag cgccgccgtt tcgacgcgga ggatccggct tcccaggccc
     2281 gcgcaccggc accccgccgc cagcgcttca cggacttcgt ccggggagaa gccgccctcg
     2341 gggccgacga ccagggcgac ggtgcggacc gctcccatcc cggagaggac ccgcttcagg
     2401 gagaacgtcc cttcgccttc gtagaagacg attttccctt cgtgacccgc cgcgcggcgc
     2461 agcgcctcgg ggtacgggac gatcccggac acctccggga cgcggccgga gccgcactgc
     2521 ttcgcggcgg ccagcgccac ccgttcccat cgcgccaacc gtttccggga atcggccggg
     2581 tcggggcggg ggatcgtgcg ggacgaccgg aacgggatca cccgcgagac gcctaactcc
     2641 gtcgcctttt cgaggatgaa gtccatcttg tcggctttcg ggagtcccac gaacagggag
     2701 acggcgacgt cgggcggagg ttccggcggg aacatctcca ggacctcggc ccgcagggag
     2761 cgcgacgtgg cctcgaggat ccgcatccgg taccggttcc cctcctcgtc gaaggcgaag
     2821 aaggaatcgc ccacggagag gcgcagggag cggagcatgt gccccgcctc ggtcccggag
     2881 aggacggcgg tgtcgccgga gatgttcttt ctatcgacga agaaggtcgg catcgcgttc
     2941 ccccgctgcg gctcaatctt cccggcggaa gaggagtgcc gtccattgcc cgtcgacgga
     3001 ttcggcgcga aggacggcgc cgtttttcac gaactcctcg accacccagc cgctcttctc
     3061 ggcgaggatg ccggaaagga tgaggtgccc gcccggggtt gttcgccgca ggaggtcggg
     3121 ggccatgtcg atcaggatct cggcgatcag gtttcccagg accaggtcga aggtgcccgg
     3181 gatcgcgtac aggggggtgg tctccgcgcg gaacacgtcc gccacgccgt tctccacggc
     3241 gttcctcgcg gcgacgtcca ccgccaccgg gtcggtgtcg accgcgagga cgcgct
//
LOCUS       DATGYW010000580         1656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_518385, whole genome shotgun sequence.
ACCESSION   DATGYW010000580 DATGYW010000000
VERSION     DATGYW010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_518385"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..117)
                     /locus_tag="VK429_08150"
                     /pseudo
     CDS             complement(1..117)
                     /locus_tag="VK429_08150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014718442.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P460 family protein"
     gene            236..1396
                     /gene="oah"
                     /locus_tag="VK429_08155"
     CDS             236..1396
                     /gene="oah"
                     /locus_tag="VK429_08155"
                     /EC_number="3.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018807 -
                     6-hydroxycyclohex-1-ene-1-carboxyl-CoA hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0019439 - aromatic compound catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase"
                     /protein_id="HLN91812.1"
                     /translation="MTTTDEIIEKSAPSHLVDHNLVGQDVESLCGGMVRYEKRPAKRR
                     DGSTAKGLFNAWIVINNPKQYNSYTTDMVKALILAFRRASVDREVNAVVFTGTGDKAF
                     CTGGNTKEYAEYYAGNPQEYRQYMRLFNDMVSSILGCDKPVICRVNGMRIGGGQEIGM
                     ACDFTIAQDLANFGQAGPKHGSAAIGGATDFLPLMIGCEQAMVSGTLCEPFSAHKAAR
                     LGIVSGLVPALKIGGTFVPNPTVITDRMLDEYGRVIHGDFKTGAAYKEGLAAIKGGEV
                     DLSLLDAAVEELCAKLLETFPECMTKSLEELRKPKLIAWNANKENARAWLALNMMNEA
                     RAGFRAFNEGTKETGREIDFVKLRQGLARGIPWSEELIESLIADLLARKSAQ"
     gene            1393..>1656
                     /locus_tag="VK429_08160"
     CDS             1393..>1656
                     /locus_tag="VK429_08160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013417734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase family protein"
                     /protein_id="HLN91813.1"
                     /translation="MTTRPVGEIVAACEGIFGDLSFAKAREWKTAVPGRKVIGYMPVY
                     VPREIVHAAGMLPVGILGGGADMEVIHGDAYYQSYICRIPRSTI"
BASE COUNT          320 a          499 c          567 g          270 t
ORIGIN      
        1 gtggcacgga aagcacgtct tgcgggtagc ttcaacggct ggtttcccct cgatgaagcg
       61 ggcgaagccc cagccgccgg tcgatgcgta cttcttcgaa accttcttta tgaatcggaa
      121 cagttagttt cccgggaggg atcgggtagg ggaaaatgtc ttgacacgtt aattggtatt
      181 gtggtactta tttgcataat taaccccgaa cataccttca gtgcccggag gagccatgac
      241 gacgaccgac gagatcatcg agaaaagcgc gccgtcccac ctcgtcgatc acaacctggt
      301 cggccaggat gtggagagcc tttgcggcgg gatggtacgc tacgagaagc gtcccgcgaa
      361 gcgccgcgac ggctcgacgg ccaaggggct tttcaacgcg tggatcgtca tcaacaaccc
      421 gaagcagtac aactcctaca cgacggacat ggtcaaggcg ctgatcctcg ccttccgccg
      481 ggcgtccgtg gaccgcgagg tgaatgccgt cgtcttcacc ggcaccgggg acaaggcgtt
      541 ctgcaccggc gggaacacga aggagtacgc ggagtattac gccggcaacc cgcaggagta
      601 ccggcagtac atgcgcctgt tcaacgacat ggtctcctcc atcctcggct gcgacaagcc
      661 ggtgatctgc cgggtgaacg gcatgcggat cgggggcggg caggagatcg ggatggcgtg
      721 cgacttcacg atcgcgcagg acctggcgaa cttcgggcag gccggcccga agcacggctc
      781 cgcggcgatc ggcggcgcca ccgacttcct cccactgatg atcgggtgcg agcaggcgat
      841 ggtctcgggt accttgtgcg agccgttctc cgcccacaag gcggcccgtc tcgggatcgt
      901 ctccggactg gtcccggcgc tgaagatcgg cgggacgttc gtcccgaacc cgaccgtgat
      961 caccgacagg atgctcgacg aatacggccg tgtgatccac ggggacttca agaccggggc
     1021 ggcgtacaag gagggcctcg ccgcgatcaa ggggggcgag gtcgaccttt ccctcctcga
     1081 cgcggcggtc gaggagctgt gcgcgaagct gctcgagacg ttccccgagt gcatgacgaa
     1141 gagcctcgag gagctccgca agccgaagct gatcgcctgg aacgcgaaca aggagaacgc
     1201 ccgggcgtgg ctggccctca acatgatgaa cgaggcccga gcgggtttcc gcgccttcaa
     1261 cgaggggacg aaggagaccg gccgggagat cgatttcgtg aagctgcggc aggggctggc
     1321 cagggggatc ccttggagcg aggagctgat cgagagcctg atcgccgacc ttctcgcccg
     1381 gaaatccgcc caatgaccac gcgcccggtc ggggagatcg tcgccgcctg cgaggggatc
     1441 ttcggggacc tcagcttcgc caaggcgcgg gaatggaaaa ccgccgtccc ggggcggaag
     1501 gtgatcgggt acatgccggt ctatgtcccg cgggagatcg tccacgcggc ggggatgctg
     1561 ccggtaggga tcctcggggg cggggcggac atggaggtga tccacgggga cgcctactac
     1621 cagagctaca tctgccggat cccccggtcg acgatc
//
LOCUS       DATGYW010000581         1934 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_197336, whole genome shotgun sequence.
ACCESSION   DATGYW010000581 DATGYW010000000
VERSION     DATGYW010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1934
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197336"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..929)
                     /locus_tag="VK429_08165"
     CDS             complement(66..929)
                     /locus_tag="VK429_08165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004623783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HLN91814.1"
                     /translation="MSETFDTDVENAWCPGCGNFAILTAVKKALERTGKPKHEIVLVS
                     GIGQAAKLPHHVDVNVYNGLHGRALPAALAIRMANPSLTVVVTSGDGDIYGEGGNHFV
                     HAIRRNPDIAVFVHDNQVYGLTKGQPSPTSDPGWTGSLQRSGVIADPFPPLASAIALG
                     CGFVARSLAADVEFTADLMVQAIAHKGFALVDILQPCVTFNKKNTYQWYGKLAYKVPA
                     DHDAADRVRAFALSLEWEERIPIGVLYRREDRPTFEERHPGVGDPPLHARETPAEAVR
                     ELLRKRLFTLP"
     gene            complement(926..>1934)
                     /locus_tag="VK429_08170"
     CDS             complement(926..>1934)
                     /locus_tag="VK429_08170"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HLN91815.1"
                     /translation="GLVFEQAEDEIAALNMAIGASYAGARAMVATSGGGFALMVEALS
                     LAGMLETPVVVALGMRPGPATGMPTRTGQEELAFALSAGHGEFPRLVLSPGSVEEAYA
                     LAHHAMEMSEVYQVPCILLTDQYLADTVVDADPADFPAFPVSRRIARGNDVPRDAKGR
                     YLRYAFTGDGVSPMAVPGEPGITVVVDSDEHMEDGHLTEDHAVRIAMVEKRMRKGEAL
                     GLETLPPLLAGPPDGEILLIGFGSTKGVIAEAREILSAGGVATAAVHLRQVAPFPGRA
                     MSEILDRYRTAFTVENNRTGQLARLIRAETAREVSGTIARFDGLPFTAGEVAERVKER
                     R"
BASE COUNT          293 a          719 c          623 g          299 t
ORIGIN      
        1 ggatcgcatg gaagaggatg cccgcaaggc cgcggaagtg gcccggaaag gccgccggaa
       61 acccgtcaag ggagcgtgaa gaggcgcttc cgcagcagct cgcgcaccgc ctccgccggc
      121 gtctcgcgcg cgtgcaacgg cgggtcgccc actcccgggt gacgttcctc gaatgtcggg
      181 cggtcctccc ggcggtacag gacgccgatc gggatccgct cctcccattc cagcgacagc
      241 gcgaacgccc gcacccggtc ggccgcgtca tggtccgcgg ggaccttgta cgccaacttc
      301 ccataccact ggtacgtatt cttcttgttg aacgtgacgc acggctgcag gatgtcgacc
      361 agggcgaacc ccttgtgcgc gatcgcctgg accatcaggt ccgcggtgaa ctcgacgtcg
      421 gcggccaggc tccgggcgac gaacccgcac ccaagcgcga tcgccgaagc gagcggcggg
      481 aaggggtccg cgatgactcc ggagcgctgc agcgacccgg tccaccctgg atcgctggtg
      541 ggggacggct gccccttcgt cagcccgtac acctggttgt cgtggacgaa cacggcgatg
      601 tcgggattgc gccggatcgc gtggacgaag tggttccccc cctcgccgta gatatcgccg
      661 tcgccgctcg tcacaacgac ggtgagcgac ggattggcca tccggatcgc cagcgcggcg
      721 ggcagggcgc gcccatggag cccgttgtag acgttgacgt ccacgtggtg cggcaatttc
      781 gccgcctgcc cgatgccgga gaccaggacg atctcgtgct tcggcttccc cgtccgctcc
      841 agcgcttttt tcaccgcggt gaggatcgcg aagttgccgc acccggggca ccaggcgttc
      901 tcgacgtccg tgtcgaaggt ctcgctcatc gccgctcctt cacgcgttcc gccacttctc
      961 cggcggtgaa cggcagcccg tcgaaccggg cgatcgttcc cgaaacctcg cgcgccgtct
     1021 ccgcgcggat caggcgcgcc agctgccccg tccggttgtt ttccaccgtg aacgccgtcc
     1081 ggtagcggtc gaggatctcc gacatcgccc gcccggggaa cggggcaacc tgtcgcaggt
     1141 ggaccgcggc ggtggcgacc cccccggccg acaggatctc ccgcgcctcg gcgatcaccc
     1201 ccttcgtgga accgaacccg atcaggagga tctccccgtc cggggggccg gcgaggagcg
     1261 gcggcagcgt ctccagcccc agcgcctccc ctttcctcat ccgcttttcc accatcgcga
     1321 tccggaccgc gtgatcctcc gtcaggtgac cgtcctccat atgctcgtcg ctgtcgacga
     1381 ccacggtgat cccgggctcg cccggcacgg ccatcgggga gacgccgtcc cccgtgaacg
     1441 cgtaccggag ataccgtcct ttcgcgtccc tcggcacgtc gttcccgcgg gcgatccgcc
     1501 ggctcaccgg aaacgcgggg aaatcggccg ggtcggcgtc caccacggtg tcggcgaggt
     1561 actggtccgt gaggaggatg cacgggacct ggtacacctc cgacatctcc atcgcatggt
     1621 gcgccagcgc atacgcctct tcgaccgagc ccggggaaag taccagacgg ggaaactccc
     1681 catgccccgc ggacagggcg aaggcgagtt cctcctgtcc cgtgcgggtc ggcatcccgg
     1741 tggccggccc cggacgcatc cccagcgcta ccaccacggg agtctccagc atccccgcca
     1801 gcgaaagcgc ctccaccatc agggcgaacc cccctccgga ggtggccacc atcgcccgcg
     1861 cccccgcgta cgaagcgccg atcgccatgt tcagggcggc gatctcgtcc tcggcctgtt
     1921 cgaagaccag cccc
//
LOCUS       DATGYW010000582         3346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_423987, whole genome shotgun sequence.
ACCESSION   DATGYW010000582 DATGYW010000000
VERSION     DATGYW010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3346
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423987"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VK429_08175"
     CDS             complement(<1..345)
                     /locus_tag="VK429_08175"
                     /inference="COORDINATES: protein motif:HMM:NF016489.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HLN91816.1"
                     /translation="MRAVATGFGAGRFPVAPGTAGTLVALPLWYWSGGWGMRHLLLLC
                     TVLLVSVPAAREEMAATRDPDPGSVVIDEIAGMLLAATGIPWGVRPVLLLFLLFRGFD
                     VFKFGPAAWLNAR"
     gene            451..2031
                     /locus_tag="VK429_08180"
     CDS             451..2031
                     /locus_tag="VK429_08180"
                     /inference="COORDINATES: protein motif:HMM:NF025030.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HLN91817.1"
                     /translation="MTETPGTPAGLSLQRVTQAVTEFAKGIKSASFYPASHPVLLQAV
                     TKIIQLFEAIPLPEQGLPIDVTKNALLYRDVPLPAGGNKAIVDLNRELYLRRASRLIF
                     LPNLQPNEVVSCLKAITRDPEEIQDAGGLERILLQERVTRIWANRVDYDQLTQLLKEE
                     ELEEVQPEELPDDPLATSDDRFQADLPPEEVVTIETLIERIAKETDPAAYRGHIVEFS
                     RFLLAERADRKIDFSMQAMTIFVRHIQTPPGGSDEIAGLARLGIKEVASEELVAHYIG
                     LLKKRGGHGRHETDAVLVALEERSVGPLLQALAEEEDLLVRKAIVEIVTRIGRVAVPA
                     VLENLTDSRWYMVRNMITVLGTLGMPDLAPHVAATLSHPDLRVKKEAIKALSRIPHPS
                     SVTALCELCFFPEETVALAATAALSPKKETEAVVTLYRRAAAKRILYPNYRLAHEAID
                     SLRAIGTDEAVTALEEILALRAPWSTKKFLAMKFHALRSISKIKGEPSEEVLQRARRS
                     ADRSLRDEAERIIERRLP"
     gene            2047..>3346
                     /locus_tag="VK429_08185"
     CDS             2047..>3346
                     /locus_tag="VK429_08185"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF024878.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HD-GYP domain-containing protein"
                     /protein_id="HLN91818.1"
                     /translation="MDRRQMENAIAGVVRHLGASLKNRGLYPPTHPLVRTPVEKCRME
                     LDPFFADRSELALTVSDGTLVLEGVPIFQLTSSLELFMARLGAIGVPAVIFERGVSVE
                     DIELFVRFLHETKDQGLPIPEIKERLARWGVTHIRVTAAEEKEKDDFTLAREIYGSAL
                     NAVVRALKDVRSGKTPDGAESNRVVREMSGMVSRNRDAMLALTLIKNFDEYTYNHSVN
                     VSVLSLALAETLGLSEPERIGIGVAGLLHDVGKTQLALDLIRKPGTLTVEEFEEIKKH
                     PEEGFAILGKMTHIHESTRSVVREHHMRFDRTGYPRPEPEYRMNRHSFVIAVADCYDA
                     LTTMRSYQRARTPRQALEIMRKLAGKSLDPDLVELLERSLGVYPVGTMVRLSTMEVGV
                     VTGSQDGGTGEPQVAILFDRSGNPLAAPQGVDLKESDPSSG"
BASE COUNT          652 a         1119 c         1075 g          500 t
ORIGIN      
        1 gcgggcgttg agccacgccg cgggcccgaa tttgaagaca tcgaaacctc ggaacagcag
       61 gaagagaagg aggacggggc gaacccccca ggggatgccg gtggccgcca gcagcatccc
      121 cgcgatctcg tcgatgacca cggacccggg gtccggatcc cgcgtcgcgg ccatctcttc
      181 ccgggcagcg ggcacggaaa cgaggagcac ggtgcaaagg aggagaagat gacgcatccc
      241 ccatccgccg gaccagtacc agagaggcag ggcgacaagg gtccccgccg tcccgggggc
      301 cacgggaaac cgccccgctc cgaaccccgt ggcgacggcg cgcaaccctc cgcgaagcca
      361 ccggttttcc cgaaaacgat tgacttgtgc ggcgcccata tcggatattt actactgtat
      421 gtcaataaaa ccctattttc caacgatgga atgaccgaga ccccgggaac tccggccggc
      481 ctttccctcc agcgggtcac gcaggcggtc accgaattcg ccaaggggat caaaagcgcg
      541 agcttttatc ccgccagtca ccctgtcctg ctgcaggccg tcacgaaaat catccagctg
      601 ttcgaggcga tccccctgcc cgaacagggc cttccgatcg acgtaacgaa gaacgccctc
      661 ctctaccggg acgtcccgct gcccgccggc gggaacaagg cgatcgtgga cctcaaccgg
      721 gagctgtacc tgcggcgcgc gtcacgactc atctttctcc ccaacctcca gccgaacgag
      781 gtcgtctcgt gcctcaaggc cattacgcgc gatccggagg aaatccagga cgccggggga
      841 ttggagcgga tcctgctgca ggagagagtg acgcggatct gggcaaaccg ggtggactac
      901 gaccagctca cgcaactcct gaaggaggag gagctcgagg aggtccagcc cgaggaactc
      961 cccgatgacc cgctggcgac ctcggacgat cggttccagg ccgatctgcc gcccgaggaa
     1021 gtggtcacga tcgaaacctt gatcgaacgg atcgcgaagg agaccgaccc cgccgcctac
     1081 cgcggtcaca tcgtggagtt ctcgcggttc ctgctcgcgg aacgcgccga caggaagatc
     1141 gatttctcga tgcaggcgat gacgatcttc gtccggcata tccagactcc tcccggggga
     1201 agcgacgaga tcgcggggct cgcccgcctc gggatcaagg aggtggcatc cgaagaactg
     1261 gtggcgcatt acatcggcct cctcaagaag cgcggaggcc atggccgcca cgagaccgac
     1321 gcggtgctcg tcgcgctgga ggagcgctcc gtcgggccgc tcctccaggc cctggccgag
     1381 gaggaggacc tgctcgtccg gaaggcgatc gtcgagatcg tgacgcggat cggcagggtt
     1441 gcggtccccg cggtcctgga gaacctgacg gactcccgct ggtacatggt gcgcaacatg
     1501 atcaccgtcc tcggcaccct cgggatgccc gacctcgcgc cgcacgtcgc cgccacgctg
     1561 tcccatcccg acctgcgtgt gaagaaggag gcgatcaagg cgctctcgag gatcccccac
     1621 ccgtcctccg tcaccgccct ctgcgagctc tgcttcttcc cggaggaaac ggtggccctc
     1681 gccgccaccg cagccctctc cccgaagaag gaaacggagg cggtcgtcac cctgtaccgc
     1741 cgggccgcgg ccaaacgcat cctctacccg aactaccggc tggcccacga ggcgatcgac
     1801 tcgctgcggg cgatcggaac cgacgaggcg gtcaccgccc tcgaggagat cctcgccctg
     1861 cgcgccccct ggtccacaaa aaagttcctg gcgatgaaat tccacgccct ccgcagcatc
     1921 tcaaagatca agggggagcc atcggaggag gttctccaac gggcgcggcg ttccgccgac
     1981 cggtcgctac gggacgaggc cgagcgcatc atcgagagac gcctaccgta agaaggggga
     2041 aacgacgtgg atcgaagaca gatggagaac gcgatcgccg gggtcgtccg tcaccttggg
     2101 gcttcgctga aaaatcgggg gctctacccg ccgacgcacc ccctggtccg aacgccggtg
     2161 gaaaagtgcc ggatggagct cgatccgttc ttcgccgacc ggtcggagct ggccctcacc
     2221 gtctcggacg ggacgctcgt cctcgagggg gtccccatct tccagctgac ttcctccctc
     2281 gagctcttca tggcgcggct cggggccatc ggtgtccccg cggtcatctt cgagcgcggc
     2341 gtctcggtcg aagacatcga gctgttcgtc cggttcctcc acgagacgaa ggatcagggg
     2401 cttccgatcc cggagatcaa ggagcgcctc gcacggtggg gggtcaccca catccgggtc
     2461 accgccgccg aagaaaagga gaaggacgac ttcaccctcg cgcgggagat ttacggaagc
     2521 gccctcaatg ccgtggtccg ggccctgaag gacgttcgga gcgggaaaac accggatggc
     2581 gcggaatcca accgggtggt ccgggagatg agcgggatgg tctcgcggaa ccgcgacgcc
     2641 atgctggcgc tcaccttgat caagaacttc gacgagtaca cgtacaatca ttcggtgaac
     2701 gtctccgttc tctccctggc cttggccgag accctcgggc tgtccgaacc cgaacggatc
     2761 ggcatcgggg tcgccggcct gctccacgac gtcggaaaga cacaactcgc cctcgacctc
     2821 atccgcaagc ccggaacctt gacggtcgag gaattcgagg agatcaagaa acaccccgag
     2881 gaagggttcg ccatcctcgg aaagatgacc cacatccatg aatcgacgcg ctccgtggtg
     2941 cgggaacacc acatgcggtt cgaccgcacc ggctacccgc gaccggagcc ggagtaccgg
     3001 atgaaccggc attcgttcgt catcgcggtc gccgactgct acgacgcgct gacgaccatg
     3061 cgctcctacc agagggcacg gacgccgcgg caggcgctcg agatcatgcg aaagctggcg
     3121 gggaaatcgc tcgatccgga tcttgtggag ctgctggagc gttccctcgg ggtctacccg
     3181 gtgggaacca tggtgcggct gagcacgatg gaggtcgggg tcgtgaccgg aagccaggac
     3241 gggggaacgg gggagccgca ggtggcgatc ctgttcgacc ggtcggggaa cccgctggcc
     3301 gccccgcagg gagtcgacct gaaggagtcc gacccgtcct cgggga
//
LOCUS       DATGYW010000583         1612 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_146241, whole genome shotgun sequence.
ACCESSION   DATGYW010000583 DATGYW010000000
VERSION     DATGYW010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146241"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..776)
                     /gene="panC"
                     /locus_tag="VK429_08190"
     CDS             complement(<1..776)
                     /gene="panC"
                     /locus_tag="VK429_08190"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012098618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HLN91819.1"
                     /translation="MERLHTPATMRSWADARRAEGARIGLVPTMGYLHEGHVSLVRVA
                     KGVGCSAVAATIFVNPTQFGPGEDFEKYPRDEAGDLAALDAAGVDAVYLPGVRDMYPE
                     KHQTFVEVTGVSQGLCGAVRPGHFRGVATVVAKLFLAAKPHVAVFGEKDYQQLAVIRA
                     MNRDLDFGIEIVGAPIVREEDGLAKSSRNVYLKGDDRVAARCLSRGLFRAKALFDAGE
                     RDAATLVDAARAAIESEPLAKPEYAEGRDPVTLAPRSGRVG"
     gene            complement(776..1570)
                     /gene="panB"
                     /locus_tag="VK429_08195"
     CDS             complement(776..1570)
                     /gene="panB"
                     /locus_tag="VK429_08195"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005998969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HLN91820.1"
                     /translation="MRKTNILDLGRMKAEGAKIVTVTAYDALFARIFDDAGVDAILVG
                     DSLGMVVLGHPDTLNVTMEDMVRHTEAAARGRKRAFLVADMPFLSYQTGPSDAIRNAG
                     RLLQAGAEGVKLEGGRNAAGTIRAVASADIPVMGHIGLTPQSIHRMGGYRVQGKTDPQ
                     RERLLDDAAAVQEAGAFAVVLEGMPAVLAGEITRTLSIPTIGIGAGAGCDGQVLVMHD
                     LLGLFDEFRPKFVKRFGELRKPVGDAVGAYAAAVRDGSFPGKEHSF"
BASE COUNT          241 a          650 c          474 g          247 t
ORIGIN      
        1 ccgacccgcc ccgaacgcgg agcgagcgtg accgggtccc gcccttccgc gtattccggt
       61 ttcgccagcg gctcactttc gatcgccgcc cgtgccgcat cgacaagggt agccgcgtcc
      121 cgctcgccgg cgtcgaagag cgccttcgcc cggaagaggc cccgcgacag gcaccgggct
      181 gcgacccgat cgtcgccctt caaatagacg ttgcgcgagc tcttcgccag cccgtcctct
      241 tcccgcacga tcggcgcccc gacgatctcg atgccgaagt cgaggtcccg gttcatcgcg
      301 cggatcaccg ccagctgctg gtaatccttc tccccgaaga ccgccacgtg gggcttcgcc
      361 gcgaggaaca gcttcgccac caccgtcgcg accccgcgga agtgtccggg gcgcaccgcg
      421 ccgcacagcc cctgcgaaac gccggtcacc tcaacgaacg tctggtgttt ttccgggtac
      481 atgtccctca cgccagggag gtacaccgcg tcgactcccg ccgcatcgag cgccgccagg
      541 tcccccgcct cgtcccgcgg gtacttttcg aaatcctcgc cggggccgaa ctgcgtcgga
      601 ttgacgaaga tcgtcgccgc caccgccgag cagccgaccc ccttcgcgac acgcaccagg
      661 ctcacatggc cctcgtgcag gtaccccatc gtcggcacca gtccgatccg ggccccttcc
      721 gcccggcgcg cgtcggccca cgaccgcatc gtcgctggtg tgtgaagccg ttccatcaga
      781 aggaatgctc cttcccgggg aacgacccgt cgcgcaccgc ggcggcgtac gcaccgaccg
      841 catcccccac cggcttgcgc agctcgccga accgcttcac gaacttcggc cggaattcgt
      901 cgaacagccc gagcaggtcg tgcatcacca gcacctgccc gtcgcagccc gcccccgcgc
      961 cgatcccgat cgtcgggatc gaaagcgtcc gcgtgatctc cccggcgagg acggccggca
     1021 tcccctcgag aaccaccgcg aaggcaccgg cctcctgcac cgccgcggcg tcgtccagaa
     1081 gccgctcccg ctgcgggtcg gtcttcccct gcacgcggta gccgcccatc cggtggatcg
     1141 actgcggggt gagcccgatg tgccccatca cggggatgtc cgccgacgcg accgcccgga
     1201 tcgttcccgc ggcgttgcgc cccccctcga gcttcacgcc ttccgctccc gcctggagca
     1261 gccgccctgc gttgcggatc gcgtccgacg ggccggtctg gtacgaaagg aacggcatgt
     1321 cggccacgag gaacgcgcgc ttgcgccccc gtgccgccgc ctccgtgtgc cgcaccatgt
     1381 cctccatcgt cacgttcagc gtatcggggt gtcccagcac caccatcccg agcgagtccc
     1441 cgacgaggat ggcgtcgacc ccggcgtcgt cgaagatgcg ggcgaacagg gcgtcgtacg
     1501 ccgtgaccgt cacgatcttc gccccttccg ccttcattcg cccaaggtcg aggatattgg
     1561 tcttgcgcat cgcacccgcc ccccttattg cccccaaaaa aaagcggcct cc
//
LOCUS       DATGYW010000584         1885 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_89574, whole genome shotgun sequence.
ACCESSION   DATGYW010000584 DATGYW010000000
VERSION     DATGYW010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89574"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VK429_08200"
     CDS             complement(<1..222)
                     /locus_tag="VK429_08200"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLN91821.1"
                     /translation="MAVVTENITRACKVIEMGCGAGNYVIRFSKMGYDCAGVDITENA
                     IRIARSAALSAGADCRFFVADVTGGLSERG"
     gene            complement(386..1132)
                     /locus_tag="VK429_08205"
     CDS             complement(386..1132)
                     /locus_tag="VK429_08205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014867739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF169 domain-containing protein"
                     /protein_id="HLN91822.1"
                     /translation="MDRTLREDFLNRWGKYFGGAELPITCWYTDDEGAAERAEPAKGH
                     RCFLADLEKIRKGESLRFDVATIGCSGGKRYLGFTKDVPPNFEHFLSCGIPGIQEGER
                     YKKSPELVKEYETRSPPFTAPARHIVFKRWDRVGEADAPQVAIFFASPDVLSGLFTLA
                     SFDEADLNAVYCPFCAGCGSIVKYPFLEKDASHPRAVLGMFDVSARPFVPGSTLSFAL
                     PMNKFVAMIDNMDESFLVTKSWKAVRRRMG"
     gene            1228..1797
                     /locus_tag="VK429_08210"
     CDS             1228..1797
                     /locus_tag="VK429_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDIG domain-containing protein"
                     /protein_id="HLN91823.1"
                     /translation="MDHKPTREEAWAILTEHVNNPSLLSHALAVEAVMRHFARKKSAD
                     EELWGIIGLVHDVDYEEHPVEHLRHAPEILRRHGWPEECVRAVASHGWGLFTDIAPVT
                     ELEKTLFAIDELTGLVAAAALVRPSRSVMNLPVKSVLKKWKDKGFAAGVDRKVIEKGA
                     TMLGVPLEELIADTIEGMKAVAETIGLKG"
BASE COUNT          398 a          581 c          524 g          382 t
ORIGIN      
        1 ccccctttcc gacaggcctc ccgttacatc cgccacgaaa aacctgcagt cggctccagc
       61 cgacaatgcc gcgcttcttg cgatgcgaat ggcattctcg gtgatatcca cgcctgcgca
      121 atcgtaaccc attttcgaaa aacggatcac gtagtttccc gctccgcagc ccatttcgat
      181 tactttgcac gccctggtta tattttctgt taccaccgcc accaatactt ccggcggcgt
      241 ccccatattt catgggatct tatcgagtgg aatgtctcga tatattctct ccatctgttc
      301 cttgatcacc accttatcca atattccctc cgcgggatca tgggggaagg tctgctatcc
      361 gtgcccccac ttgtgcggcc aacccctacc ccatccgcct ccggaccgcc ttccaggatt
      421 tcgtgacaag gaaactctcg tccatattgt cgatcatggc gacaaacttg ttcatcggga
      481 gcgcgaagct cagcgtcgag ccggggacaa agggcctggc ggaaacgtcg aacatcccga
      541 gaacggccct cgggtgggat gcatccttct cgagaaaggg gtattttacg atggatccgc
      601 aaccggcgca gaaagggcaa tacacggcat tcaggtcggc ctcgtcgaag gaggccagag
      661 tgaagagtcc cgagagaaca tccggagagg cgaagaagat ggccacctga ggtgcatcgg
      721 cttcccccac tctgtcccat cgcttgaaaa cgatgtggcg ggccggcgcc gtgaagggag
      781 gcgagcgcgt ttcgtactcc ttcaccagct cgggggattt cttgtaacgt tctccctcct
      841 ggattcccgg gatgccgcac gagagaaagt gttcgaagtt cggggggacg tctttcgtga
      901 agcccaggta gcgcttcccg ccgctgcagc ctatcgtagc gacgtcgaaa cgcaggcttt
      961 cccccttccg gattttctca aggtccgcga gaaagcaccg gtggcccttc gcaggctccg
     1021 cccgttcggc cgccccctcg tcgtcggtat accagcaggt tatcggtaac tcggcaccgc
     1081 cgaaatattt cccccatcga ttcaggaagt cttccctcag tgttctgtcc attccgcttt
     1141 tcctcctgac ctgacctcct gcaattaacc gactcaacga tggggaatat cgcacggacg
     1201 attccgttcc gatattatgg gaacattatg gaccacaaac ctacccgcga agaagcatgg
     1261 gcgatcctga cggaacacgt gaataacccc agcctccttt cgcacgccct ggcggtcgaa
     1321 gccgtgatgc gtcatttcgc ccgaaagaag agcgcggacg aggaactgtg gggcatcatc
     1381 ggactcgtcc acgacgtcga ctacgaagag caccccgttg aacacctacg gcacgcgccg
     1441 gagatcctcc ggcgccacgg gtggcccgag gagtgcgtac gggcggtcgc gtcccacgga
     1501 tgggggctat tcacggacat cgccccggtc accgaactgg agaagactct tttcgcgatc
     1561 gacgaactga cagggcttgt cgccgcggca gcactcgtcc ggccgtcgcg aagcgtcatg
     1621 aatctccccg tcaagagcgt cctgaagaag tggaaggaca agggattcgc cgctggtgtg
     1681 gaccgcaaag tgatcgagaa aggcgcaacc atgttggggg taccgctcga agagttgatc
     1741 gcggacacca tcgaggggat gaaagccgtc gctgaaacga tcggcctcaa ggggtaaccc
     1801 cggcatttgt ctcagaacct ccgcgtgacg aacagccctg ccagagagga ttgggtggat
     1861 catcgatggg ctgaatccag atcgg
//
LOCUS       DATGYW010000585         1977 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_197389, whole genome shotgun sequence.
ACCESSION   DATGYW010000585 DATGYW010000000
VERSION     DATGYW010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1977)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1977)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197389"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1043)
                     /locus_tag="VK429_08215"
     CDS             complement(<1..1043)
                     /locus_tag="VK429_08215"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN91824.1"
                     /translation="MRKIAIAVAMLLVLVSAASAADTIKLGGMYPLSGRAEGLGRECK
                     LGAEQAVEEINAKGGVLGKKFELLSADDKANVQESVNLSKRYIQKDGVDFLFGTVSSA
                     GALAVAEVAKQEKVITMITIGSTDGVTKDKWNRYTFRSGMGNSQEANSLALYTAKKQP
                     KLTKFYNIGPDYEYGRTMWTLFQAKTKELNPKAQFIGEQWPKLANPDYTSYINAILQA
                     KPDAVFCSLWGGDLVAFFKQAKPYGLFDKMKWVIATGADVALVRAMGKEMPTGIIADQ
                     RYYFHWPNSKKNQEFVKSYLAKNKEYPSAWAAQGYDGVYFLAEAIKKAGSLDKEKVIA
                     ALEGLTIESPRGKA"
     gene            complement(1049..1486)
                     /locus_tag="VK429_08220"
     CDS             complement(1049..1486)
                     /locus_tag="VK429_08220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012159203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HLN91825.1"
                     /translation="MYSVGDSAEFTKVFSEEDVFLFAGITGDRNPVHTSKEFAAKTRF
                     KERIAHGLLTAGTISAAIGMKLPGPGCLYLSQTLEFKAPVFLGDEITARVEIVEVISQ
                     KRLRMKTQCFNQDKVLVIDGEAIIVPPRQGREAVRTTKSKGGG"
     gene            complement(1763..>1977)
                     /locus_tag="VK429_08225"
     CDS             complement(1763..>1977)
                     /locus_tag="VK429_08225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLN91826.1"
                     /translation="ANAGGEESPAKGPGSLASVKAEAERSAILSALTAVGGNRTRAAE
                     LLRIHRVKLHEKIKRYGIPGSSGPKQ"
BASE COUNT          339 a          648 c          557 g          433 t
ORIGIN      
        1 gccttcccgc gcggagattc tatcgtcaat ccctccagcg ccgcgatcac cttctctttg
       61 tccaggctcc ccgccttctt gatcgcctcg gcaaggaagt agacgccgtc gtacccctgc
      121 gcggcccagg cgctcggata ctccttgttc ttcgcaaggt aggattttac gaactcctgg
      181 ttcttcttgc tgttcggcca atggaagtag taccgctggt cggcgatgat cccggtcggc
      241 atctccttgc ccatcgccct caccagcgcc acgtcggcgc ccgtggcgat gacccacttc
      301 atcttgtcga agaggccgta cggcttcgcc tgcttgaaga acgcgacgag gtcgccgccc
      361 cagagggagc agaacaccgc gtcgggcttg gcctgcagga tggcgttgat gtaggaggtg
      421 tagtcaggat tggcgagttt cggccattgt tccccgatga actgggcctt cgggttgagc
      481 tcctttgtct tcgcctggaa cagggtccac atcgtccggc catactcgta gtccggaccg
      541 atgttgtaga acttcgtcag tttcggttgc tttttcgccg tgtaaagagc gagggagttc
      601 gcctcctggg aattccccat cccggagcgg aaggtgtacc ggttccactt gtccttcgtc
      661 acgccatccg tggagccgat ggtgatcatc gtgatgacct tctcctgctt ggccacctcg
      721 gccacggcga gtgcgccggc ggagctgacc gtgccgaaca ggaagtctac gccgtccttc
      781 tggatgtacc gcttcgacag gttcaccgat tcctggacgt tcgccttgtc gtcggcggaa
      841 agcagctcga acttcttccc gaggacgccg cccttcgcgt tgatctcctc gacggcctgc
      901 tcggcgccca gcttgcactc cctgcccagg ccttccgcgc gtcccgacag gggatacatt
      961 ccccccagct tgatcgtgtc cgccgcggac gccgcggaca caagcaccaa cagcatcgca
     1021 accgcaattg caatctttct cattccgttc accctccccc cttcgatttg gtggtacgaa
     1081 ccgcttccct cccctgccgg ggagggacga tgatcgcctc gccgtcgatc accaggacct
     1141 tgtcctggtt gaagcactgc gtcttcattc gaagccgctt ctgtgagatt acctccacga
     1201 tctccacgcg cgccgtgatc tcgtcgccca ggaagacggg cgccttgaac tcgagggtct
     1261 gcgacaggta gaggcacccc ggccccggga gtttcatccc gatcgccgcc gagatcgtcc
     1321 ccgccgtgag gagaccgtgc gcgatccgct ccttgaagcg ggtcttcgcc gcgaactcct
     1381 tcgaggtgtg gacggggttg cggtcccccg tgatcccggc gaacaggaag acgtcctctt
     1441 cggagaagac cttcgtgaat tccgcggagt ctcccacgct gtacatccgg cgcacctcga
     1501 tgcgttatga gactacaggc cagcaaacaa tgttctgcaa tcgcggtgcc aagaagaatc
     1561 cggcgggtcc tcgccggatt tgtagatcca acgagttgaa taacaacgtt cttttcacgg
     1621 aaagtcccga aatccaacgc agcgccggaa tgtaccaata tcggtacttt ccgctccgga
     1681 aaaaaggggc tgcacggatt tccattgccg gggaaacgac ctatacagaa atgtacctaa
     1741 atcgttacat atacctgaaa agttactgtt tcgggccgga ggatcccggg atcccgtacc
     1801 gcttgatctt ctcgtgcagc tttacgcggt ggatccgcag aagctccgcc gccctcgtcc
     1861 tgttcccgcc gaccgcggtg agggccgaca ggatggcgga ccgctccgct tcggctttca
     1921 cggatgcgag cgacccgggt cctttcgccg ggctttcctc tccgccggcg ttggccg
//
LOCUS       DATGYW010000586         2113 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_197502, whole genome shotgun sequence.
ACCESSION   DATGYW010000586 DATGYW010000000
VERSION     DATGYW010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197502"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1046)
                     /locus_tag="VK429_08230"
     CDS             complement(<1..1046)
                     /locus_tag="VK429_08230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015349106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HLN91827.1"
                     /translation="MEDLFTRVEKPKDPVHFSGIRISIASPEQIRKWSHGEVKKPETL
                     NYRTFKPERDGLFCAKIFGPIKDYECNCGKYKRMKHRGIVCEKCGVEVIQSKVRRERM
                     GHIELASPVAHIWFLKSLPSRIATILDMPMKDVEAVIYFEKYIVLDPWETDTQPQEVL
                     TEGKYREKFEEFRELFKGDKEKQDLLRERFRVGMGAEAIRTLLAGLDLAKLSETLRKE
                     MADTASEAKKKKISKRLKIVEAFRDSEQKPEWMVQQVIPVLPPDLRPLVPLDGGRFAT
                     SDLNDLYRRVINRNNRLKRLLDLSAPEIIIRNEKRMLQEAVDALFDNGRRGKLITGSN
                     KRPLKSLSDMLKGKG"
     gene            complement(1088..>2113)
                     /locus_tag="VK429_08235"
     CDS             complement(1088..>2113)
                     /locus_tag="VK429_08235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011698407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HLN91828.1"
                     /translation="EDPELKARLSDAWRVCQDQVALVKAMFDEKISRIRRGDELPPGV
                     LKMVKVFIAMKRKLSVGDKMAGRHGNKGVISRILPEEDMPYTADGAPVDVVLNPLGVP
                     SRMNVGQILEAHLGWAAKGLGEQLQRMMEKEFSAASMREWLRKIYNSERFGAYLKELT
                     DDELREVVRKMHGGVFLASPVFSGATEIEIKDYLRLAGLPERGQTMLYDGRTGTPFQQ
                     AVTVGSMYMLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAY
                     GAAYTLQEFLTVKSDDVPGRARMYESIVKGNFSLEPGLPESFNVLIKELQALGLDVEL
                     ISEEPQQ"
BASE COUNT          324 a          711 c          640 g          438 t
ORIGIN      
        1 cccttcccct tgagcatgtc cgacagcgac ttgaggggac gcttgttcga cccggtgatg
       61 agctttcccc tgcggccgtt gtcgaacagc gcgtccacgg cctcctgcag catccgcttc
      121 tcgttccgga tgatgatctc gggcgcggaa aggtcgagga ggcgcttcag ccggttgttc
      181 cggttgatga cgcgccggta caggtcgttc aggtcagagg tggcgaaccg cccgccgtcc
      241 agcgggacca gggggcgaag gtccggcggc aggacgggga tgacctgctg gaccatccac
      301 tcgggcttct gctcgctgtc ccggaacgcc tcgacgatct tcagccgctt ggagatcttc
      361 ttcttcttcg cctcggacgc ggtgtcggcc atctccttgc gcagcgtctc ggagagcttc
      421 gccaggtcca gtcctgcgag cagcgtccgg atcgcctccg cgcccatccc cacgcggaac
      481 ctttcgcgga gcaggtcctg cttctcctta tcccccttga agagctcgcg gaactcctcg
      541 aacttctccc ggtacttccc ctcggtaaga acctcctgcg gctgcgtgtc cgtttcccac
      601 gggtcgagga cgatgtactt ctcgaagtag atgaccgcct cgacgtcctt catcggcatg
      661 tcgaggatcg tcgcgatccg ggacgggagg cttttcagga accagatgtg cgcgaccggg
      721 gaggccagct cgatgtgccc catccgttcg cggcgaacct tcgactggat cacctcgacg
      781 ccgcacttct cgcagacgat cccccggtgc ttcatccgct tgtacttgcc gcagttgcac
      841 tcgtagtcct tgatgggacc gaagattttc gcgcagaaca ggccgtcgcg ctcgggcttg
      901 aaggtccggt aattcagcgt ctccggtttc ttcacctccc cgtgggacca cttgcggatc
      961 tgctccgggg atgcgatcga gatccggatc ccggagaaat ggacgggatc cttcggtttt
     1021 tcaacgcggg tgaaaaggtc ttccacgggt gcctcccggt tacgtttccg ctacggtttg
     1081 ctgccggtta ctgctggggc tcctcgctga tcagctcgac atccaggccc agggcctgga
     1141 gctccttgat cagcacgttg aacgattcgg gaagtccggg ctcgagggag aagttcccct
     1201 tgacgatgga ctcgtacatc ctcgcgcgcc ccgggacgtc gtcggacttg acggtcagga
     1261 attcctgcag ggtgtacgcc gcgccgtacg cctcgagcgc ccacacctcc atctcgccga
     1321 gtcgctgccc gccgaactgc gccttgccgc ccagtggttg ctgtgtgacc agggagtacg
     1381 gtccggtcga ccgggcgtgg atcttgtcgt ccaccaggtg gtgcagcttc agcatgtaca
     1441 tcgatccgac ggtcaccgcc tgctggaacg gcgtccccgt ccgcccgtcg tagagcatcg
     1501 tctgtccgcg ctcggggagc ccggcgagac gcaggtagtc cttgatctcg atttccgtcg
     1561 ccccgctgaa cacgggcgag gcgaggaata ccccgccatg catcttgcgg acgacctccc
     1621 gaagttcgtc gtcggtgagt tccttgagat acgccccgaa ccgctcggag ttgtagatct
     1681 tgcggagcca ttcccgcatc gacgctgcgc tgaactcctt ctccatcatc cgctggagct
     1741 gctccccgag gcccttggcg gcccacccga ggtgcgcctc gagaatctgg cccacgttca
     1801 tgcgcgaggg aaccccgagc ggattcaaca ccacgtcgac cggcgcgcca tcggcggtgt
     1861 acggcatgtc ctcctccgga aggatccggg agatgacgcc cttgttcccg tggcggcccg
     1921 ccatcttgtc cccgacggag agcttccgct tcatcgcgat gaataccttc accatcttca
     1981 ggacgccggg ggggagctcg tctccccggc ggatcctgga gatcttttcg tcgaacatcg
     2041 ccttgacgag cgcgacctgg tcctggcaga cgcgccacgc gtccgaaaga cgggccttca
     2101 actccgggtc ttc
//
LOCUS       DATGYW010000587         1563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_146411, whole genome shotgun sequence.
ACCESSION   DATGYW010000587 DATGYW010000000
VERSION     DATGYW010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146411"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..544)
                     /locus_tag="VK429_08240"
     CDS             complement(20..544)
                     /locus_tag="VK429_08240"
                     /inference="COORDINATES: protein motif:HMM:NF024901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HLN91829.1"
                     /translation="MCAALPPAAAILVLSLAFVAPSHADIYRWEDESGVIHFTDDLSS
                     IPKKYRGKSHDILKTPPGAGKPSVSTMGAPSSPPGPSVSPSPSNGETLDRPATAQDGD
                     VTAAEKLRAKIDAKERFIRAVDEKQSLATNPYRNRFVSPSDLELYRKYKEELPTDQEA
                     LKALEARLAPVKEP"
     gene            626..814
                     /locus_tag="VK429_08245"
     CDS             626..814
                     /locus_tag="VK429_08245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019561205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91830.1"
                     /translation="MSGEAAVKAWILLFLVLFSWPLLGAFDFPATFLGVPSFLAAVFL
                     LWAVLVYVLSAASRGAGE"
     gene            830..>1563
                     /locus_tag="VK429_08250"
     CDS             830..>1563
                     /locus_tag="VK429_08250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HLN91831.1"
                     /translation="MPGPLFEGSFVLAVVTGYLLLLFGIGYLGERKFDALRARGLDRY
                     VYVFSAGVYCTSWTFYGCIGNAAQTGPSFLALFIGPSVFALSWWTVLRKLVRFCRTHN
                     VTSVPDLLSVRYGGTPWLGALATLFLVIGSVPYISLQLRAVSISYDTIAGSPGGGLAA
                     AVDPTLLVTLFLAAFALFFGGRYLDFTRPQGGVLTAVATESVIKLVILLAAGAFVCYG
                     MFDGMGEIYSRVLAHPEWKKLTGLSDA"
BASE COUNT          188 a          526 c          524 g          325 t
ORIGIN      
        1 tgcccccccg gcctggagtt tacggttcct tgacgggggc aaggcgcgcc tcgagcgctt
       61 tcagtgcctc ctggtcggtg gggagctcct ccttgtactt ccggtacagc tcgaggtcgg
      121 agggggagac gaagcggttc cgatacgggt tcgtcgcgag ggactgcttc tcgtccacgg
      181 cgcggatgaa ccgctccttc gcgtcgatct tcgcgcggag cttctcggcc gccgtaacgt
      241 cgccgtcctg cgcggttgcc gggcgatcga gcgtctctcc gttcgacgga ctcggggata
      301 cggacggacc cggcggcgag gagggggcgc ccatcgtcga aacggacggt ttccccgccc
      361 cgggcggcgt tttcaggata tcgtgggact tccccctgta tttcttcggg atgctcgaga
      421 ggtcgtcggt gaagtggatc acgccgctct cgtcctccca tcggtagatg tcggcgtgcg
      481 agggcgcgac gaacgcgagg gagaggacga gaatcgccgc ggccggcggc agagccgcgc
      541 acatcgcctg tactccggat ttccgtcgtt tcatcggttg atagtacaat atctgatcca
      601 gcgcgggcaa cggaaggggg gacgattgag cggcgaggcg gcggtgaagg cgtggatcct
      661 cctcttcctc gtcctcttct cgtggcccct cctcggcgcc ttcgacttcc ccgcgacctt
      721 cctcggcgtc ccgtcgttcc ttgccgcggt cttcctcctc tgggcggtac tcgtgtacgt
      781 cctctccgcc gccagtcgcg gcgcggggga gtaagcgtgt gagtcgctga tgccggggcc
      841 gctgttcgag gggagcttcg tcctcgccgt cgtgacgggg tacctgctcc tgctgttcgg
      901 gatcgggtac ctcggggagc ggaaattcga cgccctgcgc gcccgcgggc tcgaccggta
      961 cgtctacgtt ttttccgccg gggtctactg cacctcctgg acgttctacg gatgcatcgg
     1021 gaacgcggcg cagaccggcc cttccttcct cgccctcttc atcggcccct cggtcttcgc
     1081 cctgtcgtgg tggacggtgc tgcgcaaact cgtccgattc tgccgcaccc acaacgtgac
     1141 gtcggtcccc gacctcctca gcgtgcggta cggggggacg ccgtggctgg gggccctcgc
     1201 gacccttttt ctggtgatcg gcagcgtgcc gtatatctcc ctgcagctgc gcgccgtctc
     1261 catctcctac gacacgatcg ccggttcccc cgggggcggc ctggccgccg cggtcgaccc
     1321 gacgcttctc gtcaccctgt tcctcgctgc gttcgccctc ttcttcggcg ggcgctacct
     1381 cgatttcacc cggccgcagg gcggcgtcct cacggcggtg gcgaccgaat ccgtgatcaa
     1441 gctcgtcatc ctgcttgcgg cgggagcgtt cgtctgctac gggatgttcg acgggatggg
     1501 ggagatctac tcccgggtcc tggcccaccc ggaatggaag aagctgacgg ggctgtcgga
     1561 cgc
//
LOCUS       DATGYW010000588         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_354888, whole genome shotgun sequence.
ACCESSION   DATGYW010000588 DATGYW010000000
VERSION     DATGYW010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354888"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..645)
                     /locus_tag="VK429_08255"
     CDS             complement(<1..645)
                     /locus_tag="VK429_08255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91832.1"
                     /translation="MKPNPPIDPWAWTRNALAAALAVGLLLAASPATGQDFTLGGTDL
                     QTRVNGALAMMQYGLTPEVTTSSLSINAGEAGVNGLSLYQLGGGYTLSKSFPLYVEGN
                     AAFSRYDPVFIFSRGTVQAQVPVIWKSAVGTVGIGWDFPIAPELVLRPIANLSLGRVV
                     SEISVAGGVADGETGQEAEFLRQGQFNAVGYGGSLMLDYEHHREAYEIDVETRLS"
     gene            756..>1740
                     /locus_tag="VK429_08260"
     CDS             756..>1740
                     /locus_tag="VK429_08260"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HLN91833.1"
                     /translation="MRVALVNTNRIKPPISPLGLEYVAEALLAAGHEVSILDLCWEEP
                     PEKVIPGFFSTREYGLVGISIRNTDDCSFATRESFLPGCARIVETIREHSGAPVVAGG
                     VGFSVMPEAAMVLTGVDAGVVGDGEFTMAGIANRIRGRENWEDLPNLVLRRNGVFRRN
                     PDSAVPLSRLPLMRRALVDNRRYYIEGGQAGIETKRGCPMACVYCADPLAKGSSIRLR
                     PPGDVVAELANLVDQGIGHVHTCDSEFNVPESHALEICEGIIRRGIRNRLRWYAYCKP
                     GPFSPGLARRMRRSGCMGINFGVDSGDEGMLSRLGRDFGPSEILSAARLCRE"
BASE COUNT          310 a          556 c          548 g          326 t
ORIGIN      
        1 gctcaaccgg gtctcaacgt cgatctcgta cgcctcgcga tggtgttcgt agtcgagcat
       61 cagcgaaccg ccgtaaccca ccgcgttgaa ctgcccttgc ctgaggaatt cggcctcctg
      121 acccgtctcg ccgtcggcga cgcctccggc gacggatatc tcgctcacca cacgcccgag
      181 cgaaaggttg gcgatcggcc gcagcacgag ctccggtgca atcgggaaat cccacccgat
      241 gccgaccgtg cccaccgcgc ttttccatat caccggcacc tgtgcctgca ccgtgcccct
      301 gctgaagatg aacacggggt cgtagcggct gaacgcggcg ttgccttcca cgtagagcgg
      361 gaacgacttg ctcaaggtat agcctccgcc gagctggtac agggacagcc cgttcactcc
      421 ggcttccccg gcgttgatcg aaagggacga ggtggtcacc tcaggggtga ggccgtactg
      481 catcatggcc agggcgccat tcacgcgcgt ctggaggtcg gtgccgccca gcgtgaaatc
      541 ctggcccgtc gccggcgatg cggcaagcag cagcccgacc gcgagagcgg ccgcaagcgc
      601 gttccttgtc cacgcccacg ggtcgatagg agggtttggc ttcaaccgtt ttgcatttcc
      661 cttttcgcca ttgtgataat gctatccaca ttaaattcaa ccctctttta tttccagcat
      721 attgcgaggc agccgatttc ccttatcatg aaagcatgcg agtggccctc gtcaacacga
      781 acaggatcaa gccccccatc tctcctctcg gacttgaata cgtggccgag gcgctgcttg
      841 ccgccggaca cgaggtgtcc atcctcgacc tctgctggga agagccgccg gaaaaggtga
      901 tcccggggtt cttcagcacc cgggagtacg gcctggtcgg aatatcgatc cgtaacacgg
      961 atgattgctc tttcgccaca cgggagtcgt tccttcccgg ctgcgcaagg atcgtggaga
     1021 cgatccggga acattccggc gccccggtcg tcgcgggggg tgtcggattc tccgtgatgc
     1081 cggaggccgc catggtcctc acgggggtgg atgccggcgt cgtcggggac ggtgaattca
     1141 ccatggcagg gatcgcgaac aggataagag gacgggaaaa ttgggaggac ctcccgaacc
     1201 tcgtattgcg ccggaacggg gtcttccgtc gcaacccgga ttccgccgtt ccactctccc
     1261 ggctccccct gatgcgccgg gcgctggtcg acaaccgccg gtattacatt gaaggggggc
     1321 aggcggggat tgaaacaaag cggggatgcc cgatggcgtg cgtctactgt gcggacccgc
     1381 tggcgaaggg gagctcgatc cgccttcgtc ctcccgggga cgttgtagcg gaactggcca
     1441 acctggtgga ccaggggatc gggcacgtgc acacctgcga cagcgagttc aacgttccgg
     1501 aaagccacgc cctcgaaatc tgcgagggga tcatccgcag agggatccgc aaccgacttc
     1561 gctggtacgc ctactgcaaa ccggggccct tttcccccgg gcttgcccgg cggatgcgcc
     1621 gatccggttg catggggatc aacttcgggg tggacagcgg ggacgagggg atgctgagcc
     1681 gccttgggcg cgatttcggc ccctcggaga tcctttccgc cgcccgcctt tgccgggaaa
//
LOCUS       DATGYW010000589         3955 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_89763, whole genome shotgun sequence.
ACCESSION   DATGYW010000589 DATGYW010000000
VERSION     DATGYW010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3955
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89763"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            283..1368
                     /locus_tag="VK429_08265"
     CDS             283..1368
                     /locus_tag="VK429_08265"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HLN91834.1"
                     /translation="MSFASTHVGGTWLRTELLLSNNSDGWKRSVLLERPFYALDTRWA
                     AGGSFVDDLRVDTLYGRVGVASEFQTHAKTVNAWGGWSEGLKGRWVKRFTFGFTHDES
                     RFAPAPGNVPSNPIPPDRILVYPWVGYELAEDVFEKAKNRDQIERTEDFYLGDRYRAS
                     LGYSSTFFGADREAVIFNGQFGTSFETTESSTLLVDSTANGRVESRSVRDTTLKASGR
                     LYVRLPKRFLLFSMLSGNMGINLDLDHELVLGGENGLRGYPRNYQAGDRSALFTLEGR
                     YFSPLYLFRLVRVGGAVFYDMGRAWGENYVNAQDAGILRDVGIGLRLALTRSGLGRLI
                     HVDVAFPLDGDPTISRVQYLVTTKQSF"
     gene            1903..2817
                     /locus_tag="VK429_08270"
     CDS             1903..2817
                     /locus_tag="VK429_08270"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011955367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing diguanylate cyclase"
                     /protein_id="HLN91835.1"
                     /translation="MGDDLYKRILDSLYDGVYLVDLDRRTTYWNSGAERITGYRPDEA
                     VGRRCQDNFLVHLDVRGNSLCIHGCPLSSTMANGQPLEVEVYLQHKDGYRIPISVRAA
                     PIRDGTGRVVGAVEVFSDNSRIAAMTDLIKELRQLSLLDHSTEVGNRRFLEQQLIARL
                     NEQDRYGWRVGVLFVDIDHFKEINDRNDHIVGDRVIRMVARTLANGIRSFDIVGRWGG
                     DEFVVLIVNVDEEQLHTVSEKLRRLIENSGFTEGGKTIRVTVSVGGVLAAAGENPEAV
                     IRRADRLMLASKTAGRNRVTIGDLPGPD"
     gene            complement(3094..3519)
                     /locus_tag="VK429_08275"
     CDS             complement(3094..3519)
                     /locus_tag="VK429_08275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91836.1"
                     /translation="MFANIAILLIFGWIDYFTGYEFGFFIFYFIPVSIAAWYGGRKPG
                     IAMACASAVCWYLADRMAHHSYPKPYFIYWETFARYISFLTTALTFSKIRETVHNGQR
                     VKEELDRALEENRELKRLLQGTVGRGGVKESHPSGADPL"
     gene            complement(3708..>3955)
                     /locus_tag="VK429_08280"
     CDS             complement(3708..>3955)
                     /locus_tag="VK429_08280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91837.1"
                     /translation="VFFVRDFTGNAKHVERKQLAPGERPQGRLMEVTCLDGEVMVGTT
                     TGYDPKRPAFFLFPIDPSTNNVRVFMVTSAVRNARFL"
BASE COUNT          827 a         1145 c         1168 g          815 t
ORIGIN      
        1 ggggacgcat acgacagaca ggtcctcgat gagtccgagc ggatcttgcg gacgaaccag
       61 tatttctacg aagcccggat ccgaccaatt gcttttcagg atggccgcgt cgatgtcgag
      121 gtcctcaccc gggacgtgtg gaccctgagg cctgggattt ctttcgggcg acagggaggg
      181 gcgaacacga ccagcatcga tatctcggag ttaaaccttt tcggaacggg cgctgggatc
      241 aggctcgctc actcttcgac gcctgaccgg aacgaggaca ccgtgtcttt tgcatcgacg
      301 cacgtcggcg gcacctggct tcggaccgaa ctgctcttat ccaataacag cgacgggtgg
      361 aagcggagcg tcctcctcga gcggcctttt tacgcactcg acactcgctg ggccgccggc
      421 ggaagtttcg tggacgactt acgggtagat acgctctacg gacgggtggg cgtcgccagc
      481 gagttccaga cacatgcgaa aacagtgaat gcttgggggg ggtggtcgga aggtctgaaa
      541 ggccgctggg tcaagcgatt cacgttcggg ttcacacacg atgaatcgcg atttgcgccc
      601 gcgccgggaa acgtaccctc caaccccatt ccgcccgatc ggatcctggt gtacccatgg
      661 gtcggctatg agctcgcaga agatgtcttc gagaaggcga aaaaccgcga ccagatcgag
      721 aggaccgagg atttttacct gggagatcgc tatcgcgcgt cgctgggtta ctcgagtacc
      781 tttttcggcg ccgaccgcga ggcagtcatc tttaacggcc agtttgggac aagtttcgag
      841 accacggaat cctcgactct gctcgtggat agtaccgcca atggacgggt cgagagcaga
      901 tcggtgcggg acacgaccct gaaggccagc ggccgcctgt acgtgcgcct gccgaaaagg
      961 tttctcctct tctccatgct gtccggcaac atgggaataa acctcgacct ggaccatgag
     1021 ttggtgctcg gtggggaaaa cgggttgcgc ggatatccgc gcaattatca ggccggggac
     1081 agaagcgccc ttttcacgct ggaggggcga tacttctccc ccctgtatct cttccggttg
     1141 gtccgcgtcg gaggggccgt cttctacgac atggggaggg cctggggcga gaactacgtg
     1201 aatgcacagg acgccggcat cctgcgggat gtcggtatcg gcctccggct cgcattgacc
     1261 cggtcggggt tgggaagact catccatgtt gatgtggcat ttcccttaga cggcgatccg
     1321 acgatcagcc gggtgcagta cctcgttacg acgaagcaga gcttctgatt ggggccgatc
     1381 taggtgacct gtcccccata acccaatcca acagcacagg ggtttccctc ttcaaagtgg
     1441 tccactcccc aattacagaa accgattcaa tggagaagct ccgccccctt cctcttctgg
     1501 ctgaaagatc agaaatcccg tcatcaattt caaataaacc gggaaaatta aattaaaatt
     1561 gtcccaattc ccatggccat catgtgagcc ccacggcccg atttctggaa aaaaagggaa
     1621 ctcagggcga agtcaaattc cccctgagtg atacgatggt gcgccctgag ggattcgaac
     1681 ccccaacgac ttgatccgaa gtcaagtact ctatccaaat gagcgaagaa ctcggacgag
     1741 aagaagggat cgtcttcctc cggaaaccct tcgcttccga tgcgcttctc cggaatttgt
     1801 gggagatcct cgacgcgcct taggtcctcc ccgtttgatg gattgatata atggaggcct
     1861 ctccggaggg aggggcgctg cgggaggtct acgacacgac tcatgggtga tgatctgtat
     1921 aagcggatcc tcgacagcct ctacgacggc gtctacctcg tcgacctcga ccgccggacc
     1981 acatactgga actcgggggc cgagcggatt acgggctacc ggccggatga agccgtgggg
     2041 cgacggtgcc aggacaactt cctcgtccac ttggatgtca ggggaaactc tctgtgtatc
     2101 cacgggtgcc ccctgtcgag cacgatggcc aacggacagc ccctggaggt cgaggtctat
     2161 ctccagcaca aggacggata ccggataccc atctccgtac gggccgcccc tatacgcgac
     2221 gggacggggc gtgtggtggg ggcggtcgag gtcttctcgg acaactcccg gatagcggca
     2281 atgaccgacc tcatcaagga gctccgacag ctctcccttc tcgaccattc cacggaggtc
     2341 gggaaccggc gcttcctcga gcagcaactc atagcccgtc tcaacgagca ggaccgctac
     2401 gggtggcggg tcggtgtcct gttcgtggac attgaccact tcaaggagat aaacgatcga
     2461 aacgaccaca tcgtcggcga tcgggtgatc cggatggtcg cccggacctt ggcgaacggg
     2521 atccggtcct tcgacatcgt ggggcggtgg gggggagatg agttcgttgt cctcatcgtg
     2581 aacgtggacg aggaacagct ccacactgtc agcgagaagc tccgtcgcct catcgaaaat
     2641 tccggattca ccgaaggggg aaaaacgatc cgtgtcaccg tttccgtcgg gggagtcttg
     2701 gcggcggcgg gcgaaaaccc cgaggcggtc attcggcggg ccgaccggct catgctcgcg
     2761 agcaagaccg caggacgcaa tcgcgtaacc atcggagatc tcccggggcc cgattgaggg
     2821 gccccgctcc gcggcgcccc aagcggttca ctcctgttcc atcttcatgt tcttttcgaa
     2881 catttactgg gacgcccaaa aattaggcag tttgatagaa ggtccaccgc gataggacac
     2941 gccctgaatt ccacaggaga atccacacac agtccacagg ggatgtggaa aacgcagcat
     3001 gatcaggaga tgaccttctt tttggtgata cgggtgatca ttacggcttc gaaagttgtt
     3061 tgcacggggt ttgtagtccg accccttttc gcctcaaagg ggatcggcgc cagaggggtg
     3121 gctttccttt actcctcccc ttccaacggt cccttgcagc agccgcttca actcccgatt
     3181 ctcctccaga gcccgatcca gttcctcctt cacacgttgc ccgttgtgaa cggtttcgcg
     3241 gatcttgctg aaggtcagcg ccgttgtcag gaaggagata tatcgtgcga atgtctccca
     3301 gtagataaag tagggcttcg ggtatgagtg gtgggccatc cgatccgcaa ggtaccaaca
     3361 tacggccgat gcgcatgcca tggcgatccc cggttttctc cccccgtacc atgcggcgat
     3421 ggacacggga atgaagtaga agatgaagaa gccgaattcg taccctgtga agtagtcgat
     3481 ccagccgaag atgagcagga tggcgatgtt tgcgaacatt atccaggttc ggtgttttcc
     3541 tgtaacaaag ggcattgcgg acctccctgc gtctcgtgcc agcggaactg ccgccaattc
     3601 ccgctgccat catgtagggg gtgggatcct cagcatcgtt ccagtccttg ccgcaagcct
     3661 cgtcactctc ggttcgaatc ccttataacg cgccagtctt ccattattca gaggaaccgg
     3721 gcgtttcgga cggcgctagt caccatgaag acccgcacgt tgttggtcga cgggtcgatc
     3781 gggaacagga aaaaggcggg acgctttgga tcgtagccgg tcgtcgtccc caccatcacc
     3841 tcgccatcca agcaggtgac ctccatcaac cggccctggg gtctttctcc gggggccaat
     3901 tgctttcttt cgacatgctt cgcgttaccc gtgaagtccc ggacaaagaa gaccg
//
LOCUS       DATGYW010000590         1951 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_146623, whole genome shotgun sequence.
ACCESSION   DATGYW010000590 DATGYW010000000
VERSION     DATGYW010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1951
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146623"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VK429_08285"
     CDS             complement(<1..386)
                     /locus_tag="VK429_08285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91838.1"
                     /translation="MTPVQGSENGAKPRWAPGEHAKYALLLPLILLYLVVSGFEDQHA
                     LMKGVSRWLGVAVLVLTLYVSRVGKKFVLTVACLALIAAAAWRPARAYHGVLEFVVVA
                     AFGAMILLAPVAILRRVRREFAEEGV"
     gene            complement(397..1848)
                     /gene="aspA"
                     /locus_tag="VK429_08290"
     CDS             complement(397..1848)
                     /gene="aspA"
                     /locus_tag="VK429_08290"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007728303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008797 - aspartate ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HLN91839.1"
                     /translation="MSEPFRIEKDFLGERQVPIDAYYGVQTLRAIENFPITGYRIHPA
                     LIRAMAIVKKAAALANRDTGHLDTKIADAISAAADEVIAGKFHDQFLVDPIQGGAGTS
                     INMNTNEVLANRGLEILGAPKGTYKVISPNTHVNMAQSTNDAFPTGVHIATLDLLKEM
                     LGELRNLRDAFAAKEKEYEGIIKMGRTHLQDAVPIRLGQEFGAYRRVLDRDIKRITGI
                     GLSLFEVNMGATAVGTGLNADPAYIEKVVLYLGAISKWPIKSAEHLVDGTQNTDGYTE
                     VSAMLKVCMMNLSKIANDLRMMTSGPRCGLGELQLPARQPGSSIMPGKVNPVMAEVVN
                     QVAFQVIGNDHTICLASEAGQFELNVMEPVLVFNLLQTISIMKNAFIVFRKFCVEGLV
                     ANADRMKAYVDNSTGVITAINPHVGYETAARIAREANLTGKSVRELILRDKVLTPEQL
                     DKILDPFEMTSPGIAGTDKKPDRPWWEEQEENS"
BASE COUNT          297 a          669 c          606 g          379 t
ORIGIN      
        1 tcgaccccct cttccgcgaa ctccctcctc accctccgga ggatcgcgac gggggccagc
       61 aggatcatcg cgccgaaggc agccacgacg acgaactcga gcaccccgtg gtaggcgcgg
      121 gcaggcctcc acgccgcagc ggcgatcagg gccagacacg ccacggtcag gacgaatttc
      181 ttcccgacgc gggacacgta gagcgtcaac accaggacgg ccaccccgag ccagcggctt
      241 acgcctttca tcagcgcgtg ctgatcttcg aacccggaaa caaccaggta cagcaggatc
      301 agcggcagaa gcagcgcgta tttcgcgtgt tccccggggg cccaccgcgg cttcgccccg
      361 ttctccgacc cttgcacggg cgtcatcggt ttcccttcag gaattctcct cctgctcctc
      421 ccaccagggc cggtccggct tcttgtccgt ccccgcgatc cccgggctgg tcatctcgaa
      481 cgggtcgagg atcttgtcca gctgctccgg tgtcagcacc ttgtcccgca ggatcagttc
      541 ccggaccgac ttcccggtca ggttcgcctc ccgggcgatc cgggccgccg tctcgtaccc
      601 cacgtgcggg ttgatcgcgg tgatgacgcc ggtgctgttg tccacgtacg ccttcatccg
      661 gtccgcgttc gccacgagcc cctcgacgca gaatttccgg aacacgatga aggcgttctt
      721 catgatgctg atcgtctgga gcaggttgaa gaccaggacc ggctccatca cgttcagctc
      781 gaactggccc gcctcggagg ccaggcagat cgtgtggtcg ttgccgatga cctggaaggc
      841 gacctggttc accacttccg ccatcaccgg gttcaccttt ccgggcatga tgctgctccc
      901 cggctggcgc gcgggaagtt gcagctcgcc gaggccgcac cgcggcccgg aagtcatcat
      961 ccgcaggtcg ttggcgatct tcgacaggtt catcatgcag accttgagca tcgccgacac
     1021 ctcggtgtag ccgtcggtgt tctgggtgcc gtccacgagg tgttcagcgc tcttgatcgg
     1081 ccacttgctg atcgctccga ggtagagcac caccttctcg atgtacgccg ggtcggcgtt
     1141 gagccccgtc cccacggcgg tggcgcccat gttcacttcg aacaggctca gtccgatgcc
     1201 ggtgatccgc ttgatgtccc ggtccaggac ccggcggtac gccccgaact cctggcccag
     1261 gcggatgggc accgcgtcct ggaggtgggt ccggcccatc ttgatgatcc cctcgtactc
     1321 cttctccttc gcggcgaagg cgtcccgcag gttcctcagc tcccccagca tctccttcag
     1381 gaggtcgagg gtggcgatgt ggaccccggt ggggaaggcg tcgttggtgg actgggccat
     1441 gttcacgtgg gtgttggggc tgatgacctt gtacgtcccc ttcggggcgc ccaggatctc
     1501 caggccgcgg ttggccagca cctcgttcgt gttcatgttg atcgacgtcc ccgcgccgcc
     1561 ctggatcggg tccaccagga actggtcgtg gaacttcccc gcgatcacct cgtcggccgc
     1621 cgccgagatg gcgtcggcga tcttcgtgtc caggtgcccc gtgtcccggt tggcgagagc
     1681 ggccgccttc ttgacgatcg ccatcgcgcg gatgagcgcc gggtggatcc ggtacccggt
     1741 aatggggaag ttctcgatcg cccgcaaggt ctgcacgccg tagtaggcgt cgatgggcac
     1801 ctgacgctcc ccgaggaaat ccttctcgat gcggaacggc tcgctcatgg ggttctcctt
     1861 ctatggagga ttgtcataac acgaactttg cgatcaccag gccgacggcg acggcggtgc
     1921 acgtcgccac cagtccgggc agcatgaagg a
//
LOCUS       DATGYW010000591         1502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_478562, whole genome shotgun sequence.
ACCESSION   DATGYW010000591 DATGYW010000000
VERSION     DATGYW010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478562"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..410)
                     /locus_tag="VK429_08295"
     CDS             complement(<1..410)
                     /locus_tag="VK429_08295"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010668355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HLN91840.1"
                     /translation="MELQQLKQLKHLPRAWKRGTDFLGTRYAIMCGAMTWVSEANLVA
                     AISNEGGFGVLAGGNMPPEILVEEIARTREKTRNPFGVNLITVAPAFKQQVEVVIRER
                     CPFVFFAGSIPSGRDIAEVKAAGLKLVCFAPVLSL"
     gene            527..1495
                     /locus_tag="VK429_08300"
     CDS             527..1495
                     /locus_tag="VK429_08300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018132467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HLN91841.1"
                     /translation="MVKADELYDITVVGAGPVGLYAAYYAGLRECRTKLIETYPHVGG
                     RLISMYPEKEIFDVAGHRRIVAADLIRELSDQAMQYRPAVVLNERVTGLRILGERVIE
                     LTTPAGFHFTQTVILAAGCGAFVPRKLDIPNLIDFEGHGIFYFLPSFEPLRGKKVLIV
                     GGGNSAVDWALSLDGIATEVTLCHRMYKWQAHEAMVHRLLSSHVRVKYPYFTLKAVLG
                     EEKVTGAVIWNERSGLEETMEVDAIVLSIGMLTNIEPFRDWGLTIVGSGIAVAPDMST
                     NLPGVYAAGDIVTYPGKVLLITAGSGEAATAVNTAKEYILSEELGR"
BASE COUNT          270 a          497 c          493 g          242 t
ORIGIN      
        1 agcgagagga ccggggcgaa gcagaccagc ttcagcccgg cggccttcac ctcggcgatg
       61 tcgcgccccg aggggatgct cccggcgaag aagacgaacg ggcaccgctc ccggatgacg
      121 acctccacct gctgcttgaa cgcgggggcg accgtgatga gattcactcc gaaggggttc
      181 cgcgtcttct cccgcgtcct ggcgatctcc tccacgagga tctccggcgg catgttcccg
      241 cccgcgagca cgccgaaccc gccctcgttc gagatggccg cgacgaggtt ggcctcggag
      301 acccaggtca tcgccccgca catgatcgcg taccgggtcc cgaggaagtc ggtcccgcgt
      361 ttccacgcac gcgggagatg cttcagctgc ttcaactgct gcaactccat caatttcgct
      421 ccggggaaga caggatggga atcatacaat atataccaga cacgggccgg aaacacacca
      481 ccttcgaggg atcggcggcc cgcggggatt ctgctatagt caggaaatgg tcaaggcgga
      541 tgaactgtac gacatcaccg tcgtcggcgc ggggcccgtg gggctctacg ccgcgtacta
      601 cgcggggctg cgggagtgcc gcaccaagct gatcgagacg tacccgcatg tcggcgggcg
      661 gctgatctcc atgtaccccg aaaaggagat cttcgacgtc gcgggccacc gcaggatcgt
      721 cgccgccgat ctcatcaggg agttgtccga tcaggcgatg caataccgcc ccgcggtggt
      781 cctcaacgag cgggtcaccg ggttgcggat cctcggagag cgcgtcatcg agttgacgac
      841 gccggcgggc ttccacttca cccagaccgt gatcctcgcc gccgggtgcg gcgcgttcgt
      901 cccccggaag ctggacatcc cgaacctgat cgacttcgag gggcacggga tcttctactt
      961 cctcccatcg ttcgaaccgc tccgggggaa aaaggtcctg atcgtcggcg gggggaacag
     1021 cgcggtggac tgggcgctct ccctcgacgg gatcgccacc gaggtcaccc tttgccaccg
     1081 gatgtacaag tggcaggccc acgaggcgat ggtccaccgt ctcctctcct cccacgtgcg
     1141 cgtgaagtac ccgtacttca cgctgaaggc ggtgctgggc gaggagaagg tgaccggggc
     1201 ggtgatctgg aacgagcgca gcggtctcga ggagacgatg gaggtcgacg cgatcgtact
     1261 gtcgatcggg atgctcacga acatcgagcc gttccgcgac tgggggctga ccatcgtcgg
     1321 cagcgggatc gccgtcgccc ccgacatgtc caccaacctc cccggcgtct acgcggcggg
     1381 ggacatcgtc acgtaccccg gcaaggtcct cctcatcacc gcggggtccg gcgaggcggc
     1441 cacggcggtc aacaccgcga aggagtatat cctgagcgag gagctggggc ggtaaccccc
     1501 tc
//
LOCUS       DATGYW010000592         1840 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_478579, whole genome shotgun sequence.
ACCESSION   DATGYW010000592 DATGYW010000000
VERSION     DATGYW010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1840)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1840
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478579"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VK429_08305"
     CDS             <1..363
                     /locus_tag="VK429_08305"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HLN91842.1"
                     /translation="EGVGGVKHVVLSVDNIMHVFPVELPEAAAARKTIRKASPGNKGE
                     IGATVTGTVWRIGTKDRVLKEGDRLRKGEEVMNIEVMKTENAVKSHVVGVIRELCVKV
                     NDRVEEGQLLAVIDPGGE"
     gene            367..1002
                     /locus_tag="VK429_08310"
     CDS             367..1002
                     /locus_tag="VK429_08310"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HLN91843.1"
                     /translation="MENHALRNLAGRSDAAGVADRFFVALRGALSPVTVSDPPPPGLR
                     SAGVLVPLRVSGGEITVTLARRTERVPHHKGQICFPGGSRDPGDRDLLGTALREAEEE
                     LGIRGADVELLGAMERVPTVTGFCIQPFVARIPPDARFHLDGFEMAETFDAPLSAFTD
                     FSRYRAAGTTFLGKPYMVYFLDYDRFTIWGATARILHDLADLLRGTGASSR"
     gene            999..1607
                     /gene="metW"
                     /locus_tag="VK429_08315"
     CDS             999..1607
                     /gene="metW"
                     /locus_tag="VK429_08315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007231010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HLN91844.1"
                     /translation="MSPAGTRIDHDIILDIVPRGAKVLDLGCGDGSLLEKLVRTKDVR
                     GSGIEISDEGIRECIAKGLAVLQEDIDHGLKDYPDRSFDYIILNQTLQAVKKPHVVLS
                     EMLRVGEKAVVGFPNFAHWKMRMYLLLRGRMPKTEYLPYEWYDTPNIHFCTVTDFEEY
                     CRKFSLRVERRDYLSNDRGGRVLRGFGPNLFAESAVYLLSKL"
     gene            1660..1735
                     /locus_tag="VK429_08320"
     tRNA            1660..1735
                     /locus_tag="VK429_08320"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1693..1695,aa:Ala,seq:ggc)
BASE COUNT          318 a          566 c          627 g          329 t
ORIGIN      
        1 gagggggtgg gcggggtgaa gcacgtcgtc ctgtcggtgg acaacatcat gcatgtcttt
       61 cccgtcgagc ttcccgaggc cgcggcggcc cgcaagacga tccggaaggc gtcgccgggg
      121 aacaaggggg agatcggagc gaccgtcacc ggaacggtgt ggcggatcgg gacgaaggac
      181 cgtgtgctga aggaggggga ccgcctccgc aagggggagg aggttatgaa catcgaggtg
      241 atgaaaaccg agaacgccgt gaagtcgcat gttgtgggcg tgatccgcga actgtgtgtg
      301 aaagtgaacg accgcgtcga ggaggggcag ctcctcgccg tgatcgaccc cgggggcgaa
      361 tgaccgatgg agaaccacgc gttgaggaat cttgcgggaa ggagcgatgc cgcgggggtt
      421 gcggaccggt tcttcgtcgc cctgcggggc gcgctttccc cggtcaccgt ttcggaccct
      481 ccgcccccgg gcctgcgctc cgcgggggtc ctcgtcccgc tgcgcgtttc cggcggagag
      541 atcaccgtga cgctcgcccg ccggaccgag cgcgttcccc accacaaggg acagatctgc
      601 tttcccggcg gcagccgcga cccgggcgac cgggacctgc tgggcaccgc gctgcgcgag
      661 gcggaggagg agcttgggat ccggggggcc gacgtggagc tgctgggggc gatggagcgg
      721 gtccccaccg tcaccgggtt ctgcatccag ccgttcgtcg cccggatccc gccggacgcg
      781 cggttccatc tggacgggtt cgagatggcg gagacgttcg acgccccgct gtcggcgttc
      841 accgacttct cccggtaccg cgccgccggg acgaccttcc tcgggaaacc gtacatggtg
      901 tacttcctcg actacgaccg cttcacgatc tggggggcga cggcgcgcat cctccacgac
      961 ctcgcggatc tcctccgtgg aacaggagcc tcctcccgtt gagccctgca gggacaagga
     1021 tcgaccacga catcatcctc gacatcgtcc cccgcggcgc gaaggtgctc gacctcgggt
     1081 gcggcgacgg ctcgctcctc gagaagctgg tgcggacgaa ggatgtccgg ggaagcggca
     1141 tcgagatctc ggacgagggg atacgggagt gcatcgccaa ggggctcgcc gtcctgcagg
     1201 aagacatcga ccacgggttg aaggattacc ccgaccggtc gttcgactac atcatcctca
     1261 accagacgct gcaggcggtc aaaaaacccc acgtcgtcct gtcggagatg ctgcgcgtgg
     1321 gggagaaggc ggtggtcggg ttccccaact tcgcccactg gaagatgcgg atgtacctgc
     1381 tgctgcgcgg ccggatgccg aagacggagt acctccccta cgagtggtac gacacgccga
     1441 acatccactt ctgcaccgtg acggatttcg aggagtattg ccggaagttc tccctgcggg
     1501 tggaacgacg cgactacctc tccaacgacc gcggggggcg ggttctgcgc gggtttggcc
     1561 ccaacctgtt cgccgagtcc gcggtgtatc tgctgtcgaa actgtgatcg ccgttgcaat
     1621 tcgtgctcgg atcgaataaa atttgaattt acataacgtg gggctgtagc tcagctggga
     1681 gagcgcctga atggcattca ggaggccgac ggttcgatcc cgttcagctc caccagacaa
     1741 ttcaaggggt taggcaagat ctgcctgacc ccttttcatt ctgttcgtat cttgttcgca
     1801 ttctgtaccg cctgccaccg ctcggcggtc tctatttctt
//
LOCUS       DATGYW010000593         2122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_355260, whole genome shotgun sequence.
ACCESSION   DATGYW010000593 DATGYW010000000
VERSION     DATGYW010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355260"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..187
                     /locus_tag="VK429_08325"
     CDS             <1..187
                     /locus_tag="VK429_08325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate dehydrogenase subunit
                     beta"
                     /protein_id="HLN91845.1"
                     /translation="FELAKTVDVLLVIEMNTGQMVEDVRQCTPHHDRIAFLGKPCAMP
                     TPEEILERIRLLAGRKG"
     gene            184..963
                     /locus_tag="VK429_08330"
     CDS             184..963
                     /locus_tag="VK429_08330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012531520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HLN91846.1"
                     /translation="MSAPGKAGFSKAVYTRPRSLVDVRTHFCPGCHHGTIHKIVAECI
                     DRYGLREKTIGVACVGCAVFLYDYIDVDVVEAPHGRAPAVATGVKRAQPDKFVFTYQG
                     DGDLAAIGTSEIIHAANRGENLSVIFVNNTTYGMTGGQMAPTTMLGQKTSTTPYGRDF
                     RGDGYPIRMAELLAGLEGTAYSARVAVSTPAQIRKAKESLRKAFEMQIAGMGLSIVEF
                     LSTCPTNWGMKPLEAQKRVLGEMSEYFPLGVFKERKQADYA"
     gene            960..1511
                     /locus_tag="VK429_08335"
     CDS             960..1511
                     /locus_tag="VK429_08335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020879628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HLN91847.1"
                     /translation="MTSDIIMAGFGGQGILMIGNLLALTAMEEGKHVTYFPAYGVEMR
                     GGTANCTVVVSDEEIGSPVVGRPKGLLIMNGPSVEKFLPMLAPGGDLIINSSLVEERQ
                     VTRNDVRVLPIPADDIARNRIGSRQMASMVALGAYVTRSGIVRLSTVFDCLPKVISKK
                     YEKFIPLNINALKEGAALAGFHA"
     gene            1492..>2122
                     /locus_tag="VK429_08340"
     CDS             1492..>2122
                     /locus_tag="VK429_08340"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HLN91848.1"
                     /translation="MPDFTRDETMDDVLSEMARESGETDKPSGDPEVPVGEHVKAFRE
                     TLGMTVQQFAERTGFSAALLAQIENRMVSPSLGTLVKIANTFGTTVSSFIGGKEEREF
                     SIVRKEDRTTVSRVGLKEGGKSTYTYESLGAGKAGRKMEPFLVRLRPLSESNASRSSH
                     DGEEFLYVLSGKVTVYLGNLSDILEEGDSVYYNSTIPHYVHSADEREALI"
BASE COUNT          433 a          664 c          680 g          345 t
ORIGIN      
        1 cttcgaacta gcgaagacgg tcgacgtcct gctggtcatt gaaatgaaca cggggcagat
       61 ggtggaggac gtccggcagt gcacgccgca tcacgaccgg atcgcgtttc tcggcaagcc
      121 gtgcgccatg cccacccccg aggaaatcct cgaacgcata cgattgctgg cagggaggaa
      181 gggatgagcg ccccgggaaa ggcaggtttt tcgaaagcgg tttacacacg gccccgcagc
      241 ctggtcgacg taagaaccca cttctgccct ggatgccacc acgggacgat ccacaagatc
      301 gtcgcggagt gcatcgaccg gtacggtctc cgggaaaaga cgatcggcgt cgcgtgcgtc
      361 gggtgcgccg tcttcctgta cgactacatc gacgtggacg tggtcgaggc gccgcacggg
      421 cgcgcccccg cggtggcgac cggcgtcaag cgcgcgcagc cggacaagtt cgtcttcacc
      481 taccagggtg acggcgacct ggcggcgatc ggaacgtccg agatcatcca cgcggcgaac
      541 cgcggggaaa acctctccgt gatcttcgtg aacaacacga cgtatggaat gacggggggg
      601 cagatggcgc ccaccaccat gctcgggcag aagacctcca ccaccccgta cggacgcgat
      661 ttccgcggcg acggctatcc gatccggatg gccgaactcc ttgccgggct cgaggggacg
      721 gcctactccg cccgggtcgc ggtctccacc cccgcccaga tccggaaggc gaaggagtcc
      781 ctccgcaagg cgttcgagat gcagatcgcc gggatggggc tttccatcgt cgagttcctc
      841 tccacctgcc cgacgaactg ggggatgaag ccgttggagg cgcagaagcg ggtgctcggg
      901 gagatgtcgg aatatttccc gctgggagtg ttcaaggagc ggaagcaggc ggactacgcg
      961 tgacgagcga catcatcatg gcggggttcg gcggccaggg gatcctgatg atcgggaacc
     1021 tgctggccct cacggcgatg gaggagggga agcacgtcac ctacttcccc gcgtacgggg
     1081 tggagatgcg gggcggcacg gcgaactgca cggtggtcgt ctccgacgag gagatcggct
     1141 cccccgtggt cggacgcccg aaggggctcc tcatcatgaa cggcccctcg gtggagaaat
     1201 tcctccccat gctcgcgccg ggcggagacc tcatcatcaa cagttccctg gtggaggaac
     1261 ggcaggtaac ccgaaacgac gttcgcgtcc tcccgatccc ggccgacgac atcgcccgga
     1321 acaggatcgg aagccgccag atggcgtcga tggtcgccct cggggcgtac gtcacccggt
     1381 cagggatcgt gcgactctcg acggtctttg attgcctccc caaggtcatc tcgaagaagt
     1441 acgaaaagtt catccccctg aatatcaacg cattgaagga aggagccgcc cttgccggat
     1501 ttcacgcgtg acgagacgat ggacgacgtc ctgtccgaaa tggccaggga gtccggggaa
     1561 accgataaac cgtcggggga tcccgaggtc cccgttggag aacacgtgaa ggcattccgg
     1621 gagaccttgg gcatgaccgt gcagcaattc gcggaaagga ccggattttc cgccgcgctt
     1681 ctggcgcaga tcgagaatcg gatggtctcg ccatccctcg ggacgctcgt caagatcgcc
     1741 aacaccttcg gaaccaccgt ctcctccttc atcgggggaa aggaagaacg ggagttctcc
     1801 atcgtcagga aagaagaccg caccaccgtt tcccgcgtcg gactcaagga ggggggaaag
     1861 tccacataca cctacgaatc cctcggtgcc ggaaaagcgg ggcggaagat ggagccgttc
     1921 cttgtccgac ttcgcccgct ctccgaatcc aacgcgagcc ggagttccca cgacggcgaa
     1981 gagttcctct acgttctctc cgggaaggtg acggtgtacc tcgggaacct ctccgacatc
     2041 ctcgaggaag gagacagcgt ctactacaat tccacgatcc cccactacgt ccattccgcg
     2101 gacgaacggg aggcgctcat cc
//
LOCUS       DATGYW010000594         2443 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_90152, whole genome shotgun sequence.
ACCESSION   DATGYW010000594 DATGYW010000000
VERSION     DATGYW010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2443)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2443)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2443
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90152"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..203
                     /locus_tag="VK429_08345"
     CDS             <1..203
                     /locus_tag="VK429_08345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91849.1"
                     /translation="WGITSLKAELIILFTNAYVKVRGKAKGVEILSFKYLPKFLERLP
                     DHQTIPEAGRIYNRVKAASQPT"
     gene            complement(226..486)
                     /locus_tag="VK429_08350"
     CDS             complement(226..486)
                     /locus_tag="VK429_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018146401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008657 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) inhibitor activity
                     [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0030541 - plasmid partitioning [Evidence
                     IEA];
                     GO_process: GO:0051290 - protein heterotetramerization
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HLN91850.1"
                     /translation="MASYKILIKSSAAKEIESAPKKDRLRIIKRIQDLSSDPRPPGCE
                     KLSGHDDKYRVRQGTYRIVYSISDVSLIVSVVKVGHRKEVYR"
     gene            complement(473..706)
                     /locus_tag="VK429_08355"
     CDS             complement(473..706)
                     /locus_tag="VK429_08355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012639830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HLN91851.1"
                     /translation="MKTAIKRATVYFDSQIHRGLRLKAAETDRSISDLVNDAVKLSLA
                     EDAEDLAAFKERAHEPNMAFEDVLKDLRKRGKL"
     gene            1124..1300
                     /locus_tag="VK429_08360"
     CDS             1124..1300
                     /locus_tag="VK429_08360"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: protein motif:HMM:NF014614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HLN91852.1"
                     /translation="MVLDEINCAMDFRLIPVEEILETVKGKPDGLELILRGRGAPEEI
                     IEAAPCTTGRSSRQ"
     gene            1270..>2443
                     /locus_tag="VK429_08365"
     CDS             1270..>2443
                     /locus_tag="VK429_08365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012269216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HLN91853.1"
                     /translation="MYDRKKLEAIAAHRKKWQDEALVPSLGKSPARLKRFSTVSDEEI
                     GVLYTPDPLSNFDYEEDLGYPGQFPYTRGVQPSMYRGLLWTMRQFAGFGSAEDTNARF
                     KFLLSQGQTGLSTAFHFPTLMGYDSDSPRSKGEVGMCGVAVDSLKDMEILFDGIPLDK
                     VTTSMTINGPAAMVFAMYLAVAEKQGIPFRKLGGTIQNDILKEYIAQHTWIFPPEPSM
                     RIITDILAYCADNVPRWNTISISGYHMREAGSTAVQELAFTIADGIAYVQAGIDAGIP
                     VDKFAPRLAYFFNAHIDFFEEIAKYRAARRMWARIMRDRFHAKDENSWKLRFHTQTAG
                     CTLTAQQPMNNVVRVALQALSGVLGGTQSLHTNSMDESLALPTEQAVTVALRTQQRS"
BASE COUNT          535 a          689 c          727 g          492 t
ORIGIN      
        1 ggtggggaat cacttctcta aaagcagagt tgatcatcct gtttactaat gcatacgtca
       61 aagtacgggg gaaagcgaag ggggttgaga tcttaagctt caagtatttg ccgaaattcc
      121 tggaacggtt accggatcat cagacgatcc cggaagcagg gcgaatatac aatcgagtga
      181 aagccgcaag ccaaccgacc tgattcgatc ttagagtaat tgcatttacc ggtagacttc
      241 cttccgatgg ccaaccttta ccacactgac aattaaactc acatcggaga tcgaatagac
      301 aatccgatac gtcccctgac ggacgcggta cttatcatcg tggccggaaa gtttttcaca
      361 accgggaggc cgcggatccg aagaaaggtc ctgaatgcgc ttgatgattc ggagacgatc
      421 ttttttgggg gctgactcaa tttccttggc ggcagacgac ttgatcagaa tcttataact
      481 tgccacgttt cctcagatcc ttgaggacat cctcgaatgc catattcggt tcgtgggccc
      541 tctccttgaa ggcagccagg tcttcggcgt cctcggcgag gctcaatttg acggcgtcgt
      601 tcacaagatc ggaaatggac ctgtccgtct cagccgcctt gaggcgaaga ccccggtgga
      661 tctgtgagtc gaaatatacg gtggctctct tgatggcggt tttcatgtcc ccacaataac
      721 gctttgacgt cttgacgtca agtcggataa tggtgggaca ggcgtaaaag gaaagggggt
      781 tacggcatcg gggctttctg gacgatggcg ctagagttct cagccgtact tcttggctgc
      841 cgcctcgatg gcactgccag cattggccag atcccctggg accatcacag gatgaatctc
      901 aatgcgtgca ttcaatgcca ggaaccacgg ctcggcaatc gctggggggg ctttttttct
      961 ttgttgaggg aactttccct ggtaaagaga tatcttatga acacgattca gttgggtgtt
     1021 cgaggataat tcgttcagct gaactacgta caaatggcga gaacagcgca ttcaggggag
     1081 gaaacaggcg aaggagatca tctcgggcag gaaggcggat atcgtggtgc tggacgagat
     1141 caactgcgcg atggatttcc gcctgatccc ggtcgaggag atcctcgaaa cggtcaaggg
     1201 gaagcccgac gggttggaac tgatcctcag ggggcgaggt gctcccgagg agatcatcga
     1261 ggcggcgcca tgtacgacag gaagaagctc gaggcaatag cggcccaccg gaagaagtgg
     1321 caggacgagg cgctcgtgcc gagcctgggg aagtcaccgg cgcgcctcaa gcgattctcg
     1381 accgtctccg acgaggagat cggcgttctt tacacccccg atcccctttc gaacttcgat
     1441 tacgaggagg acctcgggta ccccggtcag tttccgtaca cccgcggtgt gcagccctcg
     1501 atgtaccggg gcctgctgtg gacgatgcgg caattcgccg ggttcggatc ggccgaggac
     1561 acgaacgccc ggttcaagtt cctcctctcc caggggcaga ccgggctctc caccgcgttc
     1621 cacttcccga cgctcatggg atacgactcg gattcccccc ggtccaaggg agaggtcggg
     1681 atgtgcggcg tcgccgtgga ttcgctcaaa gacatggaga ttctgttcga cgggatcccg
     1741 ctggacaagg tgaccacctc gatgacgatc aacgggcccg cggcgatggt cttcgcgatg
     1801 tacctggcgg tcgcggagaa gcaggggatt cccttccgca agctcggcgg cacgatccag
     1861 aacgacatcc tgaaggagta catcgcccag cacacctgga tctttccccc cgagccgtcg
     1921 atgcggatca tcaccgacat cctcgcctac tgcgccgaca acgtcccgag gtggaacacg
     1981 atcagcatca gcggctacca catgcgggag gcgggatcca cggcggtaca ggaactggcc
     2041 ttcacgatcg ccgacgggat cgcctatgtc caggcgggga tcgacgcggg gatccccgtg
     2101 gacaagttcg ctccacggct cgcgtatttt ttcaacgccc acatcgactt cttcgaagag
     2161 atcgcgaagt accgggcggc ccgacgtatg tgggcgcgca tcatgcggga ccggttccac
     2221 gcgaaggacg aaaactcgtg gaaactccgg ttccacactc agacggccgg atgcacgttg
     2281 accgcgcagc agccgatgaa caacgtcgtc cgggtcgctc tccaggcgtt gtcgggggtc
     2341 ctcgggggaa cccaatccct ccacaccaac tcgatggacg aatcgctcgc gcttccaacg
     2401 gaacaggccg tgaccgtcgc gctccggacc cagcagagat cgg
//
LOCUS       DATGYW010000595         2373 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_355482, whole genome shotgun sequence.
ACCESSION   DATGYW010000595 DATGYW010000000
VERSION     DATGYW010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2373
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355482"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..906
                     /locus_tag="VK429_08370"
     CDS             <1..906
                     /locus_tag="VK429_08370"
                     /inference="COORDINATES: protein motif:HMM:NF015426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRCF domain-containing protein"
                     /protein_id="HLN91854.1"
                     /translation="GQMDEETLSVAMDDFAARRADILLCTAIIEAGLDLPNANTILVN
                     HAHRFGLAQLYQLRGRVGRDRHRAYAYFIVPKDVGLTRDATRRLAVLEELTELGSGFR
                     IASHDLEIRGAGNLLGKDQSGQIHQVGYELYTQLLSEAVAEISGIVSSQEEEPELELR
                     VPAFLPDDYIDEAGERLEFYRKLSSAKTVDAADEIEMALLDRFGRLPAPARALCDLAR
                     MRAGMRAAGVAELKRGDGSLFLTLSAHSPFDRANLVSWVTRERKTFSFVRGEILAMRL
                     PGPDPAEILAAAKNLLSRFGAGSTM"
     gene            954..1814
                     /locus_tag="VK429_08375"
     CDS             954..1814
                     /locus_tag="VK429_08375"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HLN91855.1"
                     /translation="MRKMPVLFVIFAFVASACGGAPGGGPQGKALAVVNGEPLTEATL
                     QKEVENLPPYVRPILETAAGRAQFLESVITRDLLMREALRRGIDRRPDVADRIAMARK
                     SIVLEALLRDVADKAPGLSDAALRTIYDANPAAYQVGERVRVSHMLFREKARALEILG
                     RAKAGESFEALMKEVGSGNGEVAADLGEIERGNFVKEFEAAAFAADPGVPTGPVKTTY
                     GYHVIKVYAKIPAGTRSFEEVKPKLLAEQREQVQRDAFEGLISDLRKQATVRVLYKPE
                     GPPVQSPQGK"
     gene            1831..>2373
                     /locus_tag="VK429_08380"
     CDS             1831..>2373
                     /locus_tag="VK429_08380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91856.1"
                     /translation="MRGRGSHVRAAAGLALVAALLWACSPAPPKRSAAEVVVAEVDGA
                     PIVLTDVKNEILSMRGYTPSLEARGPSRGEVSEAVRRAIERTVVLREGRRRGVTLPTG
                     ALEEEVMRFRADFPPGGLEKALLQAGMEPDAWREQLRRSLLYRRSADAIATAGATVTP
                     QEVEEAFLKERNPSTVPERIR"
BASE COUNT          363 a          788 c          864 g          358 t
ORIGIN      
        1 gggcagatgg acgaggagac cctgtccgtc gccatggacg acttcgcggc gcgtcgcgcc
       61 gacatcctcc tgtgcaccgc gatcatcgag gccgggctgg accttcccaa cgcgaacacg
      121 atcctcgtga accacgcaca ccggttcggg ctggcccagc tgtaccagct ccggggccgc
      181 gttggccgcg accgccaccg ggcgtacgcg tacttcatcg tcccgaaaga cgtgggcctc
      241 accagggacg ccacccggcg gctcgccgtg ctcgaggagc tcacggagct cggatcgggg
      301 ttccggatcg cctcccacga cctcgagatc cggggcgcgg ggaaccttct ggggaaggac
      361 cagtcgggac agatccacca ggtagggtac gagctgtaca cgcagctgct ctccgaggcg
      421 gtggcggaga tctcggggat cgtctcctcg caggaggagg agccggaact ggagctgcgc
      481 gtcccggcat tccttccgga cgactacatc gacgaggccg gcgagcgtct ggagttctat
      541 cggaagctgt cgtcggcgaa gaccgtggac gccgcggacg agatcgagat ggccctgctg
      601 gaccggttcg gccggcttcc cgcccccgcc cgcgccctgt gcgacctggc gcggatgcgc
      661 gccggaatgc gcgccgcggg agtggcggag ctcaagcgcg gggacggctc cctgttcctc
      721 accctctccg cccactcccc gttcgaccgg gcgaacctgg tctcctgggt gacgcgggag
      781 cggaaaacct tctccttcgt tcgcggggag atcctcgcga tgcgccttcc cggcccggat
      841 cccgcggaga tcctggcggc ggcgaaaaac ctgttgagcc ggttcggcgc cggcagtacc
      901 atgtgacatt gggtcgcatc ccttcgaaac ttttcgccaa ggagagccgc tccatgcgga
      961 agatgccggt tctgtttgtg attttcgcgt tcgtcgcatc cgcctgcgga ggcgcccccg
     1021 ggggcgggcc gcaggggaag gccctcgcgg tggtgaacgg ggagcccctc acggaggcga
     1081 cgcttcagaa agaggtggag aatctccccc cctacgtgcg gccgatcctc gaaaccgccg
     1141 cgggcagggc gcagtttctc gagagcgtca tcacccggga cctgctgatg cgggaggcgc
     1201 tgcggcgcgg gatcgaccgc cgccccgacg tggccgaccg gattgccatg gcgcgcaagt
     1261 cgatcgtcct cgaggcgctg ctgcgcgacg tggccgataa ggcccccggg ctttccgacg
     1321 cggcgctgcg cacgatctac gacgcgaatc ccgcggcgta ccaggtgggg gagcgggtga
     1381 gggtgagcca catgctcttc cgtgagaagg cccgcgcgct ggagattctc ggtcgcgcga
     1441 aggcggggga gtcgttcgaa gcgctgatga aggaggtcgg gtccgggaac ggcgaggtcg
     1501 ccgcggacct cggggagatc gagcgcggga acttcgtgaa ggagttcgag gcggcggcct
     1561 tcgccgccga ccccggcgtg ccgacgggtc ccgtcaagac cacgtacggg taccacgtga
     1621 tcaaggtgta cgcgaaaata cccgcgggca cccgttcgtt cgaggaggtg aagccgaagc
     1681 tcctcgccga gcagcgcgag caggtgcaac gggacgcctt cgaggggctg atctcggacc
     1741 tgaggaaaca ggcgacggtg cgtgtcctct acaagcccga gggccctccc gtccagtccc
     1801 cccaggggaa gtgatcccct gcagggtttt ttgaggggca gagggtccca tgtccgtgcc
     1861 gcggccgggc tcgcgctggt cgccgcgttg ctgtgggcat gctctcccgc cccgccgaaa
     1921 cggtccgccg ccgaggtcgt cgtcgccgag gtggatggcg cccccatcgt ccttacggac
     1981 gtcaagaacg agatcctctc gatgcgcggc tacaccccgt ccctcgaggc ccgggggccc
     2041 tcccgcggag aggtttccga ggcggtccgg cgggcgatcg agcggaccgt cgtcctgcgc
     2101 gaggggcggc gccggggggt cacgctccca acgggggccc tcgaggaaga ggtgatgcgg
     2161 ttccgggcgg atttcccgcc gggggggctc gagaaggcgc tactccaggc ggggatggaa
     2221 cccgacgcat ggcgggagca gctccggcgt tccctcctgt accgtcggtc ggcggacgcc
     2281 atcgcgacgg ccggggccac ggtgaccccg caggaggtgg aggaggcgtt cctgaaggaa
     2341 cggaatccct cgacggttcc cgagcggatc cgc
//
LOCUS       DATGYW010000596         2235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_90244, whole genome shotgun sequence.
ACCESSION   DATGYW010000596 DATGYW010000000
VERSION     DATGYW010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90244"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..199
                     /locus_tag="VK429_08385"
     CDS             <1..199
                     /locus_tag="VK429_08385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015436855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HLN91857.1"
                     /translation="RRLAREEGLLSGISCGAAVAAAVRLAKLPEFAGKTIVVVLPDAG
                     ERYLTTALFEGWFDAESAATI"
     gene            complement(203..910)
                     /gene="ubiE"
                     /locus_tag="VK429_08390"
     CDS             complement(203..910)
                     /gene="ubiE"
                     /locus_tag="VK429_08390"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011938284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052624 - 2-phytyl-1,4-naphthoquinone
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0042372 - phylloquinone biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HLN91858.1"
                     /translation="MYRLTDRNRSIGEMFSSIAPRYDFLNRLLSLGVDRRWRRLAVAE
                     TVPSTGGRYLDVATGTGDMALEIVRRKGAGASVAGVDLSVEMMRVGQEKCARAGRSRS
                     VAFFRAPGECLPFRDASFDSACIAFGIRNVADRERGLREMCRAVRTGGRVVVLEFSSP
                     PGTVLGALYRFYFRNVLPRIGGIFSRGSAYAYLPESVLAFPDPPAFAEMMRAAGCVSV
                     THRPLTFGIVTLYVGVR"
     gene            1047..>2235
                     /locus_tag="VK429_08395"
     CDS             1047..>2235
                     /locus_tag="VK429_08395"
                     /inference="COORDINATES: protein motif:HMM:NF042645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6600 domain-containing protein"
                     /protein_id="HLN91859.1"
                     /translation="MKRVASYIAASIAAFLLAGVPPALGQGEAGPEGGVSAYVVARVK
                     VLDGSVWVRPSGGGDWEEFSSNSPIPPRSRVSVPDGSEAELQFHGGQFVLLTSGTDLE
                     VRDLQEGQSVFRLRAGEIRFDLPPDDFAPVSVRVPGGAVASFPVPGRQWLTVTDTDET
                     RLVVRRGSAVVTVDGDEHHLRAGQEAVIGRDVAVGPYRGGADESAEPPYEEAEGQGAT
                     PPVVVSELREYGEWVIVPTYGTVWRPRVAVGWSPYVYGRWVWIFPYGWTWVSSEPWGW
                     YPYRCGYWLTDPVFGWVWTPYNAFVSVSFVFGSNRYHHHNVYYRPATVRFVPEGGNVR
                     WVPLRPGERYRPVTYPRGDARLARWNRPLDSGRVFVRSGPDRREWRDYSVVRTERQAE
                     MRKT"
BASE COUNT          357 a          716 c          804 g          358 t
ORIGIN      
        1 tcgacggctg gcgcgggagg aggggttgct ctcggggatc tcgtgcgggg cggcggtggc
       61 cgcggcggtg cgtctcgcga agctcccgga gtttgccggg aagacgatcg tggtggttct
      121 ccccgatgcc ggggagcggt atctcaccac cgccctgttc gaggggtggt tcgatgcgga
      181 aagcgccgcg acgatataag gtctagcgca ccccgacgta cagggtgacg atcccgaagg
      241 tcagcgggcg gtgggttacg gaaacgcaac ccgccgcgcg catcatctcg gcgaaggcgg
      301 gaggatcggg gaacgcgagc accgactccg gaaggtacgc gtaggcggac ccccgggaga
      361 agatcccccc gatccgcggc aggacgttcc tgaagtagaa ccggtacaac gccccgagga
      421 ccgtccccgg tggcgaggag aattcgagaa ccaccacgcg cccgccggtg cggacggcgc
      481 ggcacatctc ccgaagtccc cgctcgcggt ccgccacgtt ccggatcccg aaggcgatgc
      541 aggcggagtc gaaggaggcg tcccggaacg ggagacattc ccccggcgcc cgaaagaacg
      601 cgacgcttcg ggatcgcccc gcccgtgcgc acttctcctg ccccacccgc atcatctcca
      661 cggagagatc gacgccggcg acggacgctc ccgcgccttt ccggcgcacg atctccaacg
      721 ccatgtcgcc cgttccggtc gcgacatcca ggtatcttcc gccggtcgac ggcacggttt
      781 cggcaacggc gagacggcgc cagcgacgat ccacccccag cgacagcagc cggttgagaa
      841 aatcgtaccg tggggcgatg gaggagaaca tctccccgat ggaccggttg cggtcggtga
      901 gccgatacaa ttcgctgaaa ctccgtcgtg gtttaagggt ttaaagtata gcaggcttgg
      961 ccttccggcg attcggagcg ggaacgatga atattcgcca cgcgccggcc cgtctaaagc
     1021 gtgtgaggaa agggagggaa cgtgccatga agcgggtcgc ctcgtacatc gccgcatcga
     1081 tcgccgcgtt tcttctcgcc ggggtcccgc ccgcactcgg ccagggggag gcaggccccg
     1141 aagggggagt ctccgcgtac gtcgtcgccc gggtcaaggt actggacggc tccgtgtggg
     1201 tacgcccgtc aggcgggggg gattgggagg agttctcgag caacagtccg attcccccgc
     1261 gcagtcgcgt gagcgtcccg gacgggtcgg aggcggagct tcagttccac ggtgggcaat
     1321 tcgtcctgct gacctccggg accgacctcg aggtccgcga ccttcaggaa gggcaatccg
     1381 ttttccggct tcgcgcgggg gagatccggt tcgacctccc tccggacgac ttcgccccgg
     1441 tttccgtccg ggttcccggg ggggcggttg cgtccttccc cgttcccggg aggcaatggc
     1501 tgaccgtgac ggacaccgac gagacgcggc tggtcgtgcg ccgcggcagc gccgtggtca
     1561 ccgtggacgg cgacgagcat cacctgcgtg ccggccagga ggcggtgatc ggccgggacg
     1621 tcgctgtcgg accgtaccgc gggggagcgg atgaatccgc cgagccgccg tacgaagagg
     1681 ccgagggcca gggcgcaacg ccgccggtgg tggtgagcga gctgcgggag tacggcgaat
     1741 gggtcatcgt gccgacatac ggaaccgtat ggcggccgcg cgtggcggtg ggctggtccc
     1801 cctacgtgta cggccgctgg gtgtggatct tcccgtacgg atggacgtgg gtttccagcg
     1861 agccgtgggg gtggtacccg tacaggtgcg ggtactggct gaccgacccg gtcttcgggt
     1921 gggtctggac tccgtacaac gcgttcgtgt ccgtcagctt cgttttcggt tcgaaccgat
     1981 atcatcatca caacgtttac taccgccccg cgacggtccg cttcgttccc gagggcggca
     2041 atgtccgctg ggtgccgctg cgtccgggag agcggtaccg tccagtcaca tacccccgcg
     2101 gcgatgcccg gctcgcgcgg tggaaccgac cgctcgacag cggccgggtc ttcgttcgct
     2161 cggggccgga tcgccgcgaa tggcgcgact atagcgttgt gcgcaccgag cgtcaggcgg
     2221 agatgcggaa gaccc
//
LOCUS       DATGYW010000597         1691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_90411, whole genome shotgun sequence.
ACCESSION   DATGYW010000597 DATGYW010000000
VERSION     DATGYW010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90411"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /gene="rplV"
                     /locus_tag="VK429_08400"
     CDS             <1..306
                     /gene="rplV"
                     /locus_tag="VK429_08400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020880422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HLN91860.1"
                     /translation="MRVSPRKARLVVDLIRGKKITEARTILALANRASAATVKKVLDS
                     AIANAGQTGVIDVGTLYVKSACVNQGASQKRFRPAPMGRAHKYKRRTSHITIVVDEA"
     gene            331..987
                     /gene="rpsC"
                     /locus_tag="VK429_08405"
     CDS             331..987
                     /gene="rpsC"
                     /locus_tag="VK429_08405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002625383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HLN91861.1"
                     /translation="MGQKTHPYGFRLVSIRTWRSRWYSEKEYAPQLQEDLRIRGFVKA
                     RLNHAGVSSVEIERRSNRVTVFIATARPGIVIGKKGAEIENLKKEIQKLTPKEVSINI
                     VEIRRPETDGQLTAENVAMQLERRVAFRRAMKKTVLSSMKLGAKGIKIQVSGRLGGAE
                     MSRTEWYREGRVPLHTLRADIDYGFSEARTTYGIIGVKVWIYKGEVLPKAPSSPSTNE
                     "
     gene            1001..1411
                     /gene="rplP"
                     /locus_tag="VK429_08410"
     CDS             1001..1411
                     /gene="rplP"
                     /locus_tag="VK429_08410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006928918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HLN91862.1"
                     /translation="MLAPKRVKFRKQMKGRRRGKAQSGNTLNFGDFGVKAADAAWITS
                     RQIEAARIAMTRFIKRGGKIWIRIFPDKPITKKAAETRMGKGKGAPEEWVAVVRPGRV
                     LYEIEGVDEATAREAFRLAAHKLPIHTTFLSREA"
     gene            1418..1618
                     /gene="rpmC"
                     /locus_tag="VK429_08415"
     CDS             1418..1618
                     /gene="rpmC"
                     /locus_tag="VK429_08415"
                     /inference="COORDINATES: protein motif:HMM:NF013027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HLN91863.1"
                     /translation="MKTKDVRDLGAEELRQKERELRDEIFRLKMKRAASSLENKMLIR
                     NRRRDLARVVTFLQAKTEGKAN"
BASE COUNT          368 a          488 c          589 g          246 t
ORIGIN      
        1 atgcgcgtct ccccgaggaa ggcgcgcctc gtggtggacc tgatccgggg gaagaagatc
       61 accgaggcac ggacgatcct tgccctcgcg aacagggcct ccgccgcgac cgtgaaaaag
      121 gtcctcgatt cggcgattgc caacgccggg cagaccggcg tgatcgacgt cggtacgctc
      181 tacgtgaaga gcgcgtgcgt gaaccagggg gcctcgcaga agcggttccg gccggcgccg
      241 atgggaaggg cgcacaagta caagcggcga accagtcaca taacgatcgt ggtagacgag
      301 gcatagctaa ccgctaacag gagggggatt ttgggacaga agacacaccc ttacggattt
      361 cggctggtgt ccatccggac ttggcgctcg cgatggtact ccgaaaagga gtacgcgccg
      421 caactgcagg aggaccttcg catccgcggc ttcgtcaagg cccgcctgaa ccacgcgggg
      481 gtctcctcgg tcgagatcga gcggcgcagc aaccgcgtca ccgttttcat cgccacggcc
      541 cgtccgggga tcgtgatcgg caagaagggc gccgagatcg aaaacctgaa gaaggagatc
      601 cagaagctca cgccgaagga agtgtcgatc aacatcgtcg agatccgccg accggagacg
      661 gacgggcagc tgaccgcgga gaacgtcgcg atgcagctgg agcggcgggt cgctttccgc
      721 cgcgccatga agaagaccgt cctttcctcg atgaagctgg gcgccaaggg gatcaagatc
      781 caggtctccg gccgcctcgg cggcgccgag atgtcgcgga ccgagtggta ccgtgaaggg
      841 cgggtgcccc ttcacacttt gagggccgac atcgactacg gtttctcgga agcccgcacc
      901 acctacggga tcatcggtgt gaaggtctgg atctacaagg gcgaggtgct gccgaaggcg
      961 ccctcatccc cttccaccaa cgaataggag aacgggaatc atgctcgccc ccaaaagggt
     1021 caagttccgc aagcagatga agggccgccg ccgcgggaag gcgcagtccg ggaacacgct
     1081 caacttcggc gatttcgggg tgaaggcggc cgacgccgca tggatcactt cccggcagat
     1141 cgaggcggcc cggatcgcga tgacgcgctt catcaagcgc ggcgggaaga tatggatacg
     1201 gatctttccc gacaagccga tcacgaagaa agcggcggaa acccggatgg ggaaggggaa
     1261 gggcgcaccc gaggagtggg tcgccgtggt ccgccccggc cgtgttcttt acgagatcga
     1321 gggtgtcgac gaggccacgg cgcgggaggc gtttcggctg gcggctcaca agctcccgat
     1381 ccatacgaca ttcctttcca gagaggcata gacgcccatg aagacaaagg atgtgcggga
     1441 tctcggggcg gaggaacttc gccagaagga gcgggagctt cgcgacgaga tcttccgtct
     1501 gaagatgaag cgcgccgcgt cctccctgga gaacaagatg ctgatccgga accggcgcag
     1561 ggacctggcg cgcgtggtga cgttcctgca ggcgaagacg gaaggaaagg cgaactgaca
     1621 tgacggtgga gggtgcgatg gaagcccgcg gcgcgcggaa aaagaaggtg gggacggtgg
     1681 tcagcgacaa g
//
LOCUS       DATGYW010000598         1897 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_147252, whole genome shotgun sequence.
ACCESSION   DATGYW010000598 DATGYW010000000
VERSION     DATGYW010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147252"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..594)
                     /gene="nusB"
                     /locus_tag="VK429_08420"
     CDS             complement(172..594)
                     /gene="nusB"
                     /locus_tag="VK429_08420"
                     /inference="COORDINATES: protein motif:HMM:TIGR01951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HLN91864.1"
                     /translation="MRRESREKVFQTLFMMDALGVGPDEAMPLFALASDPPSDAGYYA
                     EAVRGVWGRLEEIDALIGEAAEHWRVGRMTLVDRNILRLGAYELSLGSDIPFAVAINE
                     AVEIGKRFGSEESGAFINGILDRIADIVRKKTTAEGTA"
     gene            complement(626..1087)
                     /gene="ribE"
                     /locus_tag="VK429_08425"
     CDS             complement(626..1087)
                     /gene="ribE"
                     /locus_tag="VK429_08425"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013259179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HLN91865.1"
                     /translation="MVRVIEGDLQGQGVKVSIVVSRFNSFITDRLLDGALDALKRHGV
                     EEKGITVIRVPGAFEIPLGVRRAAGQKVDAVIALGALIRGGTPHFDYLSAEVTKGVAQ
                     VTLETGIPVSFGVLTTDTVEQAIERAGTKAGNKGAEAAQSALEMVSLLRRM"
     gene            complement(1097..>1897)
                     /gene="ribA"
                     /locus_tag="VK429_08430"
     CDS             complement(1097..>1897)
                     /gene="ribA"
                     /locus_tag="VK429_08430"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014811642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HLN91866.1"
                     /translation="GVLVRTGQTEGSVDLARLAGCIPAGVICEIMNEDGTMARMPDLE
                     RFSAEHNLRIVSIKDLIEYRMHGERLVERTGETRMPLRIGGEFTAYTYTNALNGDTHI
                     AFVKGEIRPGEPILVRVHSECLTGDVFGSLRCDCGEQLRNALRRIEAEGTGILLYMRQ
                     EGRGIGLENKIRAYNLQDKGFDTVEANEQLGFKPDLRDYGVGAQILVDLGVRKIRLLT
                     NNPKKIIGLSGYGLQMIERVPIEVAPNEANVRYLRTKKKKMGHILNME"
BASE COUNT          275 a          697 c          577 g          348 t
ORIGIN      
        1 ggtcgccgat cgtgtacacc cgcacgtgcc ccatgtggat ccggccggaa gggtacggga
       61 acatctcgag gcagtaatat ttcggcgcgg acagcgcgtc cgggcaccgg aagacgccgg
      121 cctcttccca cctgcgctgc cacttccgct cgatctcctg cggcttgtac ttcacgccgt
      181 cccctccgcc gtcgtcttct tccgcacgat gtcggcgatc cggtcgagga tcccgttgat
      241 gaacgcgccg gactcctcgg agccgaaccg cttgccgatc tcgaccgcct cgttgatcgc
      301 caccgcgaac gggatgtcgc tcccgaggga gagctcgtac gcgccgaggc gcaggatgtt
      361 ccggtccacc agcgtcatcc ttccgacccg ccagtgctcc gccgcctccc cgatgagggc
      421 gtcgatctcc tcgaggcgcc cccatacacc gcggaccgcc tccgcgtagt agcccgcgtc
      481 ggatggagga tcggaggcca gcgcgaacag gggcatggcc tcgtcggggc caaccccgag
      541 tgcgtccatc atgaagaggg tctggaaaac cttctcccgg gattccctgc gcacgggtgc
      601 ttcgctttcc ccgggaccgc cccgctcaca tcctgcggag gaggctgacc atttcgagcg
      661 cggactgggc cgcctcggct cccttgttcc ccgccttcgt gccggcgcgt tcgatcgcct
      721 gctccacggt gtccgtcgtg aggacgccga acgatacggg gatccccgtc tcgagcgtca
      781 cctgggcgac tcccttggtg acctcggcgc tcaggtagtc gaagtgcggg gtgcctcccc
      841 ggatcagcgc gcccagcgcg atcaccgcgt cgaccttctg gcccgccgcc cggcggaccc
      901 ccagcgggat ctcgaacgcg cccgggaccc ggatcaccgt gatccccttc tcctccaccc
      961 cgtgccgctt cagggcgtcg agcgcaccgt cgagcagccg gtcggtgatg aagctgttga
     1021 acctcgagac gacgatcgac accttgactc cctggccctg cagatccccc tcgatcaccc
     1081 gcaccatcgc cccctcctac tccatgttca ggatgtggcc catcttcttc ttcttggttc
     1141 gaaggtaccg gacgttcgcc tcgttcggcg cgacctcgat cggcacgcgc tcgatcatct
     1201 gcaggccgta gcccgacagg ccgatgatct ttttcgggtt gttcgtgagg agtcggatct
     1261 tgcgtacccc gaggtccacc aggatctgcg ccccgacgcc gtaatcccga aggtcgggct
     1321 tgaacccgag ctgctcgttc gcctcgacgg tgtcgaaccc cttgtcctgc aggttgtagg
     1381 cgcggatctt gttctcgagc ccgatcccgc gcccctcctg gcgcatgtag agaaggatcc
     1441 ccgtcccctc cgcctcgatc cgccggaggg cgttgcgcaa ctgctcgccg caatcgcacc
     1501 gcagcgaacc gaagacgtcg ccggtcaggc actcggaatg gacgcgcacg aggatcggct
     1561 ccccggggcg gatctccccc ttgacgaagg cgatgtgggt gtcgccgttc agcgcgttgg
     1621 tgtaggtgta tgccgtgaac tcgcccccga tccgcagcgg catccgggtt tcgccggtgc
     1681 gctccaccag ccgctcgccg tgcatccggt actcgatcag gtccttgatg gagacgatcc
     1741 ggaggttgtg ctccgcggag aaccgctcga gatcgggcat ccgcgccatc gtgccgtcct
     1801 cgttcatgat ctcgcagatc accccggcgg ggatgcatcc ggcaagccgg gcgaggtcga
     1861 ccgacccttc cgtctgcccg gtgcgcacca gaacccc
//
LOCUS       DATGYW010000599         1932 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_256172, whole genome shotgun sequence.
ACCESSION   DATGYW010000599 DATGYW010000000
VERSION     DATGYW010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1932)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1932)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1932
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_256172"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1932
                     /locus_tag="VK429_08435"
     CDS             <1..>1932
                     /locus_tag="VK429_08435"
                     /inference="COORDINATES: protein motif:HMM:NF025038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN91867.1"
                     /translation="GKPCDPTQFRFATTSEVAPLTRIVGQARALDAIDFGLDMRSLGF
                     NIYVLGEPGTGKTSAIRSFVSEKAKADPVPPDQAYVFNFRDPEEPIALSLAPGQGTEF
                     QRDMRELVDYLRSAIPKVFDSKEYEGQKGRIVEGFQSRQKEIFGSLEEEAKSRGFNVR
                     PTINGFSIVAVDDSGEPMTEEKFATLDDVRRRELRENGKRIQERLDDVVRIVKAEERA
                     AKEALAQLERNAALSVLGQRLEEICRKHEGNGKLLAYLDTVRENVLASIEDFKSMGEE
                     APSPLPFLKIGRQEPDFSRYSVNVIVNNGGTNGAPCVFESNPTYYNLFGRIEHRFQMG
                     AALTDFTMIKSGALHKANGGFLVINALDLLRNIFSYDALKRAIRNREVKIEDVWEQYR
                     LVSTTAMKPEPIPLNVKIVLIGNPEIYYLLYNLDEEYRELFKVKADFDHRIERTEESV
                     DHYAAFVATKVKEEALMPFAREGVARVVDFGSRLAEDQGKLSTRFSDISNLLREANYW
                     ASREGVKVVTGDHVLRALRAKITRNSRIEEQVRELAAEGTLIVETAGEQAGQVNGLAV
                     YDMGDYSFGKPSRITATVYAGKGGVLNIERETKLSGKIHEKAVLILTNYLGRRFARMA
                     PISLTASITFEQLYGMIEG"
BASE COUNT          416 a          554 c          648 g          314 t
ORIGIN      
        1 ggggaaaccg tgcgatccga cgcaattccg cttcgccacc acgtcggagg tcgccccgct
       61 cacgcgtatc gtcggccagg cgcgggcgct cgatgcgatc gatttcggcc tcgatatgcg
      121 cagtctcggc ttcaacatct acgtgctcgg cgagcccggt acgggaaaaa cctccgccat
      181 ccgctccttc gtgtcggaga aggcgaaggc cgaccctgtg ccacccgatc aggcctacgt
      241 cttcaacttc cgggatcccg aggaaccgat cgccctttcc ctggcccccg ggcagggtac
      301 ggaattccag cgggacatgc gggagctggt ggactatctt cgctcggcga tcccgaaggt
      361 gttcgactcg aaggagtacg agggacagaa gggacggatc gtcgaggggt tccagagccg
      421 gcagaaggag attttcggat cgctggaaga ggaggcgaaa tcgagggggt tcaacgtccg
      481 ccccacgatc aacggttttt ccatcgtcgc ggtggacgat tcgggagagc cgatgacgga
      541 agagaagttc gccacgctcg acgacgtgag gcggcgggag ttgcgggaga acgggaagcg
      601 gatccaggaa cggctggacg acgtggtccg catcgtgaaa gcggaggaga gagcggcgaa
      661 ggaagcgctc gcgcagctgg agcgcaatgc ggcgttgtca gtgctcggac agcggctcga
      721 ggagatttgc aggaaacacg agggaaacgg aaaactgctc gcgtacctcg acaccgtccg
      781 ggagaacgtc ctggccagca tcgaagactt caagagcatg ggagaagaag ctccctcccc
      841 gttgccgttc ctgaaaatcg gccggcagga accggatttc tcccggtatt ccgtcaacgt
      901 gatcgtgaac aacgggggga cgaacggggc tccgtgcgtc ttcgagagca acccgaccta
      961 ctacaacctc ttcggacgga tcgagcaccg gttccagatg ggggccgccc tcacggactt
     1021 cacgatgatc aagtccgggg cccttcacaa ggcgaacggg ggcttcctgg tcatcaacgc
     1081 gctggatctt cttcgaaaca tcttctccta cgacgcgctg aagcgggcga tccgcaaccg
     1141 ggaggtgaag atcgaggacg tctgggagca gtaccgtctc gtgtcgacga cggcgatgaa
     1201 accggaaccg atcccactga acgtgaaaat cgttctgatc ggcaacccgg agatctacta
     1261 cctgttgtac aacctcgacg aggagtaccg cgaactgttc aaggtgaagg cggacttcga
     1321 ccaccggatc gaacggacgg aggagagcgt cgaccattac gcagcgttcg tggcgaccaa
     1381 ggtgaaggag gaggcgttga tgcccttcgc ccgggaaggg gtcgcgcgcg tggtcgattt
     1441 cggctcacgg ctggcggagg accaggggaa gctctccacg agattcagcg acatctccaa
     1501 tctcctgagg gaggcgaact actgggcgtc gcgggagggc gtgaaggtgg tgacgggcga
     1561 ccacgtgttg cgggcgcttc gggcgaagat cactcgaaac agccggatcg aggagcaggt
     1621 gcgggaactc gccgccgaag ggaccctcat cgtcgagacc gcgggggaac aggcgggcca
     1681 ggtgaacgga ctcgcggtgt acgacatggg ggactacagc ttcgggaagc cctcccgcat
     1741 caccgccact gtttatgcgg gaaaaggcgg ggtcctgaac atcgagcgcg aaacgaagct
     1801 ctccgggaag atccacgaaa aggcggtcct gatcctcacc aattacctcg ggcgtcgatt
     1861 cgcacggatg gcgcccatca gcctcaccgc ctcgatcacc ttcgaacagc tttacgggat
     1921 gatcgagggg ga
//
LOCUS       DATGYW010000600         1796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_256247, whole genome shotgun sequence.
ACCESSION   DATGYW010000600 DATGYW010000000
VERSION     DATGYW010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1796
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_256247"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..900
                     /locus_tag="VK429_08440"
     CDS             <1..900
                     /locus_tag="VK429_08440"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HLN91868.1"
                     /translation="RETIESVLRQEGDFLLDYIVVDGGSTDTSVEIIRRYGSLIDGGN
                     WPVRCRGIRYRWVSEKDKGQSDAIIKGFGMAEGEILSWLNSDDTLLPGALSKVVERFR
                     EVPSTGIVYGKVRYVDVKGHAVGEVDTAPTDHERLAVLNEICQPGAFFRRSEYDAAGG
                     LDPSLHYVMDHDLWIRMTLRDEPVFLPEFLASYRLHGESKTADPRHAVAFQQETVGIL
                     LRHYAWAPLNRVYACCNARVRSLFPERLPGAAWLAIPPSLFWTLWEYLRLNRWVRLED
                     LRMIRPGNLRKILRGGTAPPAGR"
     gene            904..>1796
                     /locus_tag="VK429_08445"
     CDS             904..>1796
                     /locus_tag="VK429_08445"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLN91869.1"
                     /translation="MRVAEIVSTYPPLHGGMGYVCHHNARLLAQRGHDVTVFTLDHGI
                     PHGWVDSPGFRVVRLRATLLHGDGGVVPSLYRRVSGYDAIHLHYPFYGGGEYVWLASV
                     LRGQRYLLTYHMDVHGNTPFKRAAIGLYEPLLGRRILRGAFRVGAVSRAHIESSRAAG
                     VVPPERIVEIPNGVDTERFQPRTKDPELVERYGLAGKTVALFVGNLQPFKRLDLLIDA
                     IAAIDNPDLVLMVVGGGYGENRYKAQVRDLGIGHRVVFAGPKKPEEDLPAHYALGDFL
                     VLPSTHSESFGLVVLEAMASG"
BASE COUNT          331 a          553 c          567 g          345 t
ORIGIN      
        1 cgggaaacca tcgaaagcgt cttacgacaa gagggggatt tccttctcga ttacatcgtc
       61 gtggacggcg gttcgacgga tacctcggtg gaaatcatcc ggcgctatgg gtccctgatc
      121 gatggaggaa actggccggt ccggtgtcgc ggcatccggt acagatgggt aagcgagaaa
      181 gataagggtc agtcagacgc catcatcaaa ggattcggta tggccgaggg ggagatcctc
      241 tcctggctga actcggacga caccctactg cccggtgcac tctccaaggt cgtggagcgg
      301 ttccgggagg tcccctcgac ggggatcgtt tacggcaagg tacgctacgt cgacgtgaaa
      361 ggtcacgcgg tcggggaggt cgacaccgct cccacggacc atgagaggtt ggccgtcctg
      421 aacgagatat gccaaccggg agcgtttttc cgtcgctccg aatacgacgc cgcaggtggg
      481 ttggaccctt ctctgcacta cgtgatggac cacgacctct ggattcggat gactctcagg
      541 gacgaaccag tcttcctccc cgagttcctt gcctcctatc ggttacatgg agagtcaaag
      601 acggcggacc cacggcacgc ggtggcgttc cagcaagaga cggtcgggat tctcctccga
      661 cactacgcat gggcacccct taaccgggtt tatgcctgct gcaacgcccg ggtccgatcc
      721 ttgttccctg agcgattgcc aggcgccgca tggctggcaa ttccaccttc cctgttctgg
      781 acattgtggg aatatctccg gctcaaccgc tgggtgcgcc tggaggacct acggatgatc
      841 cgcccaggca atctccggaa aattctccgg gggggcacgg cacccccggc agggcgataa
      901 gccgtgcggg tcgcggaaat cgtctccacc tacccccctc tgcacggtgg gatggggtac
      961 gtctgccacc acaacgcccg cctgctggcg caaagagggc atgacgtcac cgtcttcaca
     1021 ctggaccacg ggatcccgca cggttgggtc gattcaccgg gattccgggt cgtgcggctt
     1081 cgcgccaccc tcctccatgg ggatggcggt gtggttccgt ccctttaccg gagagtttcg
     1141 gggtacgacg cgatccacct ccactacccc ttttacgggg gaggggagta cgtttggctc
     1201 gcctccgtcc ttcgggggca gcgatacctg ctgacgtacc acatggacgt ccacggaaat
     1261 accccgttca agagggcggc gatcgggctt tacgaaccgc tccttggaag acggatcctt
     1321 cggggagcct tccgggtcgg ggcagtaagc cgtgcgcaca tcgaaagctc gcgggccgcc
     1381 ggagtcgttc caccggagcg tattgtggag atccccaacg gggtggacac ggaacggttc
     1441 caaccccgca ccaaggaccc cgaactggtg gagcggtacg ggctggcggg aaagacggtg
     1501 gcactgttcg tcggcaatct ccagcctttc aagcgtctcg acctgctgat cgacgccatt
     1561 gccgcgattg acaacccgga cctcgtcctt atggtcgtcg gaggcggata cggtgagaac
     1621 cggtacaagg cccaggtccg ggacctcggg atcggacacc gggttgtgtt cgccggcccg
     1681 aagaaaccgg aagaggacct cccggcccac tatgccttgg gggactttct ggtccttccc
     1741 tccacccact ccgagtcttt cggcctggtg gtcctggagg cgatggcttc cggaaa
//
LOCUS       DATGYW010000601         1838 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_147457, whole genome shotgun sequence.
ACCESSION   DATGYW010000601 DATGYW010000000
VERSION     DATGYW010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1838
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147457"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..273)
                     /locus_tag="VK429_08450"
     CDS             complement(<1..273)
                     /locus_tag="VK429_08450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91870.1"
                     /translation="MIPVVAHSVNPYLPNSGSWIYHQIRFLESFRPIVLTKRTENLDQ
                     FPIAPIYSVYGQPFLRRSLEKALARARTAPFRIHRDALRREGAVLLH"
     gene            complement(302..757)
                     /locus_tag="VK429_08455"
     CDS             complement(302..757)
                     /locus_tag="VK429_08455"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011343225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HLN91871.1"
                     /translation="MPESVGYVTGLLRHFGATIGEKTRVYTPLTLVNAKKDFTNLVLG
                     NNVYLGHGAVLDLKERIVVEDDVTISMGATMATHFHMGEIPLKARFPSKSGPIRIRGN
                     VYLGSNVVVLSGVEIGGGSVIGAGAVVIGDVPPGVVAGGVPARVLKKIE"
     gene            complement(828..>1838)
                     /locus_tag="VK429_08460"
     CDS             complement(828..>1838)
                     /locus_tag="VK429_08460"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HLN91872.1"
                     /translation="HAVAVSSCTAALHLSLLAAGVVPGDEVVVPAMTFVATANAVLHA
                     GGTPVFADCDRSTFNVTAASVAAVITPRTRAVVPVHFAGLPCPMDAIQGVTGPAKIRV
                     VEDCAHCIEGTIGGRHAGTFGEFGAFSFYPTKNVTSIEGGMVVTGDAEAAERMRISRL
                     HGLSRDAWKRFGGEGYRHYQAETLGYKYNMTDVQAAVGIHQLRRVARNLEARERIWRR
                     YDEAFRSLPIALPAPPGNGVRHARHLYSLLLDADRLRVSRDTVLEAIQKEGIGVGVHY
                     IAVPLHPYYRDRFGLREGMFPNAEYVSARTLSVPLTPYLDEQDVEDVITAVTKVLLYY
                     SR"
BASE COUNT          311 a          602 c          628 g          297 t
ORIGIN      
        1 atgcagcagt acggcgcctt cccgtcggag ggcgtcccgg tggatccgga atggggcggt
       61 cctcgcccgg gcgagcgcct tctccaggct cctgcgcagg aacggctgcc cgtagacgct
      121 gtagatcgga gcgatgggga actggtcgag gttttccgtc cgcttggtga ggacgatcgg
      181 gcggaacgat tcgagaaagc ggatctggtg gtagatccag ctccccgaat tgggaagata
      241 cgggttgacc gaatgtgcga cgacggggat catgccgggc cgccgggtct ctcccgcgga
      301 atcactcgat cttcttgagg acgcgcgccg gcacgccgcc cgccacgacc ccggggggga
      361 cgtccccgat gaccaccgct cccgccccga tcacgctccc tcccccgatc tcgacgccgg
      421 aaagcaccac gacgttcgat ccgaggtaga cgttcccgcg aatgcggatc gggcccgact
      481 tcgaggggaa ccgcgctttc agggggatct cccccatatg gaaatgggtg gccatcgtgg
      541 ctcccatcga gatcgtgacg tcgtcttcca cgacgatccg ttccttcagg tccagcacgg
      601 ccccgtgccc aaggtatacg ttgttcccga ggaccaggtt cgtgaagtcc ttcttggcgt
      661 tgacgagcgt gaggggggtg tagacccggg ttttctcgcc gatcgtcgcg ccgaagtgcc
      721 gaagcaggcc ggtgacgtac cccacggatt cgggcaaggc gaggatccga tgaagctgcc
      781 tcgtggaaag agcccaggaa aacaggggga gcagccgggt ccgcacgtca gcgcgaatag
      841 tacaggagga ccttcgtcac cgccgtgatg acgtcctcca cgtcttgttc gtccaggtag
      901 ggggtgaggg gcacgctgag cgtccttgcg gatacatact cggcgttcgg gaacatcccc
      961 tcccgaaggc cgaaacggtc ccggtaatac gggtggagcg gtacggcgat gtaatggacg
     1021 cccacgccga tcccctcctt ctggatcgct tcgaggacgg tatcccgcga cacgcggagc
     1081 cggtccgcat cgaggaggag gctgtagagg tgccgtgcgt gccgcacgcc gttccccggc
     1141 ggcgcgggga gggcgatcgg aagggaccgg aaggcctcgt cgtaccggcg ccagatcctc
     1201 tccctcgcct ccaggttccg ggcgacccga cgcagctgat ggataccgac ggcggcctgg
     1261 acgtcggtca tgttgtactt gtacccgagg gtctcggcct ggtaatggcg gtacccttcc
     1321 ccgccgaacc gcttccaggc gtccctcgaa aggccgtgga gccgggagat ccgcatccgc
     1381 tccgccgcct ccgcatcccc tgtcacgacc atccccccct cgatggacgt cacgttcttc
     1441 gtgggataga aactgaaggc cccgaactcc ccgaacgtcc cggcgtggcg gccgccgatg
     1501 gtcccctcta tgcaatgggc gcaatcctcg acgacgcgga tcttcgccgg gccggtgacg
     1561 ccctgaatcg cgtccatcgg gcacggcaga cccgcgaagt ggaccggaac gacggcacgc
     1621 gtgcggggag tgatcacggc ggcgacggac gcggccgtca cgttgaatgt gctcctgtcg
     1681 cagtcggcga acaccggggt ccccccggcg tgcagcacgg cgttcgcggt ggcgacgaag
     1741 gtcatcgcgg ggaccacgac ctcgtccccg gggacgaccc cggcggcaag gagggacagg
     1801 tgcagcgcgg ccgtgcagga ggataccgcg acggcatg
//
LOCUS       DATGYW010000602         2235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_479500, whole genome shotgun sequence.
ACCESSION   DATGYW010000602 DATGYW010000000
VERSION     DATGYW010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_479500"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2235
                     /locus_tag="VK429_08465"
     CDS             <1..>2235
                     /locus_tag="VK429_08465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012531207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004352 - glutamate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0019551 - glutamate catabolic process to
                     2-oxoglutarate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase domain-containing
                     protein"
                     /protein_id="HLN91873.1"
                     /translation="IMEVFNRLNLGVRRAYTLTISTGVHPYFLGTFYVRRRAGGLFGK
                     DSHLYRQLRRELYNTQILATESPTYRDFVQKRLMTGEEASLVNAFIGFAHANLAHNQP
                     HTYTYEDVVRAFHTHPEMALQLTRLFGLRFDPDVADRETTYGKALEEATHAVETHNTG
                     HKMLDDFRRSIFRCTLFFIRRTLKTNFYVPEKHALAFRLDPAYLADLGPDFTSDLPPE
                     RPFRITFFYGRHGLGFHIGFSDIARGGWRTIIAGNRDDFVTAANSLFRENYVLAHTQH
                     LKNKDIYEGGSKMVVVALNPPGVQTRERLTQRLHKVQWCFIQAFLDIFVTQGGKAKDP
                     RVVDYYGEDEPIELGPDENMHDSMIESIAALSRQRGYILGIGIMSSKEVGINHKEYGV
                     TSTGVVTFAEVAMREQGIDVRKDPFSVKFTGGTNGDVAGNAMRILLDRCPKVAIRLVL
                     DGTGALYDPAGADREELSRILLKEDVDAFDPQRLSPGGFLVYRSVRRTEGLRELFRRV
                     ERTGQGVAEQWVTMDEFHKEFDSLPFSVKADLFIPAGGRPETIDGSNWKRYLAEDGSP
                     SAPVIVEGANSFITPEARGKLQESGTVLLRDASANKCGVISSSYEIIANLLMSEKEFL
                     DHKEEYVRDVLAILEKRARDEAELIFRRRKESGGKTPYTEISNALSWEINGHYAQLFA
                     FFRGRPELALARPFRDAILAHLPAFVREHPKFRGRVRTLPPKYLAAILAAEIATTIVY
                     RGGF"
BASE COUNT          400 a          760 c          725 g          350 t
ORIGIN      
        1 agatcatgga ggtgttcaac cggctgaacc tcggagtccg gcgcgcctat acgttgacga
       61 tctccacggg ggtgcacccg tactttctcg gcaccttcta cgtccgccgc agggccggcg
      121 ggctgttcgg gaaggattcg cacctctacc ggcagctccg gcgggagctg tacaacaccc
      181 agatcctggc caccgagagc ccgacctacc gggacttcgt ccagaagcgg ctgatgacgg
      241 gagaggaggc gtccctcgtc aacgccttca tcggcttcgc ccacgccaac ctcgcccaca
      301 accagccgca cacctacacg tacgaggacg tcgtccgggc gttccacacc cacccggaga
      361 tggccctgca gttgacccgc ctgttcgggc tgcgcttcga cccggacgtc gcggaccgcg
      421 agacaacgta cgggaaggcg cttgaggagg ccacccacgc cgtcgagacg cacaacaccg
      481 gacacaagat gctggacgat tttcggcggt cgatcttccg gtgcaccctc ttcttcatcc
      541 ggcggaccct gaagaccaac ttctacgttc cggagaagca cgccctcgcc ttccgcctcg
      601 acccggcgta cctcgccgac ctgggacccg acttcacctc ggatctcccc ccggagcgtc
      661 ccttccggat cacctttttc tacggccgcc acgggttggg attccacatc ggcttctccg
      721 acatcgcccg gggcggctgg cgcacgatca tcgcggggaa ccgggacgac ttcgtcaccg
      781 ccgcgaactc cctcttccgc gagaattacg tcctcgccca tacccagcac ctgaagaaca
      841 aggacatcta cgagggcggc tccaagatgg tggtggtggc gctgaacccc cccggggtgc
      901 agacccggga gaggttgacc cagcggctcc acaaggtgca gtggtgcttc atccaggcgt
      961 tcctggacat cttcgtcacc cagggcggga aggcgaagga cccgagggtg gtggactatt
     1021 acggagagga cgagccgatc gagctggggc ccgacgagaa catgcacgac tccatgatcg
     1081 agtcgatcgc ggccctctcc cgccagcgcg gctacatcct cgggatcggc atcatgtcga
     1141 gcaaggaagt ggggatcaac cacaaggagt acggggtgac ctccaccggc gtggtcacgt
     1201 tcgccgaggt cgccatgcgg gagcaaggga tcgacgtccg gaaagacccg ttctccgtca
     1261 agttcaccgg cggcaccaac ggggacgtgg cggggaacgc catgcggatc ctcctcgacc
     1321 ggtgccccaa ggtggccatc cggctggtcc tcgacggaac gggggcgctg tacgacccgg
     1381 ccggggcgga ccgcgaggaa ctgtcccgga tcctcctcaa ggaggacgtg gacgcgttcg
     1441 acccgcagcg cctctccccg ggcggcttcc tggtgtaccg gagtgtccgc aggaccgagg
     1501 gactgcgcga gttgttccgg agggtggaac ggacgggtca gggggtcgcg gagcagtggg
     1561 tcaccatgga cgagtttcac aaggagttcg actccctccc gttctccgtg aaggcggacc
     1621 tgttcatccc ggcggggggc cggcccgaga cgatcgacgg gtcgaactgg aagcggtacc
     1681 tggccgagga cggcagcccg tcggccccgg tgatcgtgga gggggcgaac tccttcatca
     1741 ccccggaggc acgggggaag ctccaggaga gcggcacggt tctcctgcgg gacgcctccg
     1801 cgaacaagtg cggcgtgatc tcctcctcgt acgagatcat cgccaacctg ctgatgagcg
     1861 agaaggagtt cctcgaccac aaggaggagt acgtccggga tgtcctcgcc atcctggaga
     1921 agcgcgcgag ggacgaggcc gagctgatct tccggcgccg gaaggagtcc ggcgggaaga
     1981 ccccgtacac cgagatctca aacgccctga gctgggagat caacgggcac tacgcgcagc
     2041 tgttcgcctt cttccgcggg cggccggagc tcgccctcgc ccggcccttc cgtgacgcca
     2101 tccttgccca cctgccggcg ttcgtccggg agcacccgaa gttccgcggc cgggtgcgca
     2161 cgctcccccc gaaatacctc gcagcgatcc tcgccgcgga gatcgccacg acgatcgtat
     2221 accggggagg gttcg
//
LOCUS       DATGYW010000603         1732 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_256557, whole genome shotgun sequence.
ACCESSION   DATGYW010000603 DATGYW010000000
VERSION     DATGYW010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_256557"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1533)
                     /gene="purL"
                     /locus_tag="VK429_08470"
     CDS             complement(<1..1533)
                     /gene="purL"
                     /locus_tag="VK429_08470"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011423260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HLN91874.1"
                     /translation="MKEKTVTPDLAREHGLSAAEYETVLGILGRTPSLTELGIFSVMW
                     SEHCSYKSSRIHLKKFPTKGPRVLQGPGENAGIVDIGDGLAVVFKMESHNHPSFIEPY
                     QGAATGVGGILRDVFTMGARPIASLNSLRFGRPDHPRTRYLVSGVVSWIAGYGNCIGV
                     PTVGGEVSFDECYDGNILVNAFTLGVVRHERIWLGTAAGVGNPVIYVGSKTGRDGIHG
                     ATMASGEFDEKSEEKRPTVQVGDPFTEKLLLEACLELMRTDAIVGIQDMGAAGLTSSS
                     FEMASRGGTGFLMDLDRVPQREEGMTPYELMLSESQERMLIVAKKGRESEVREIFEKW
                     DLDVSVIGEVTGDGIGRIRWRGKTVAEIPIAALTDKAPVYDRPAERPPGQDALQRLDP
                     AGLPSPSDLGETWVRLMGGPELADKKWVYRQYDHMIRTNTLVLPGSDAAVLRVKGTRK
                     GIALSVDCNSRYCYLDPFVGGMIAVCEAARNVACSGAEPIGLSDCLNFGNPEKPEVMW
                     QFR"
     gene            complement(1530..>1732)
                     /locus_tag="VK429_08475"
     CDS             complement(1530..>1732)
                     /locus_tag="VK429_08475"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007313834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HLN91875.1"
                     /translation="CDPEGNVTRESNPNGSARNIAGICNEGGNVLGMMPHPERSSEMA
                     LGSGDGRRLFDAMVAWLGEKSA"
BASE COUNT          262 a          616 c          554 g          300 t
ORIGIN      
        1 gcggaactgc cacatgacct ccggcttttc ggggttgccg aagttcaggc aatccgagag
       61 cccgatcggc tccgcgccgg agcaggcgac gttgcgggcc gcctcgcaca cggcgatcat
      121 cccgccgacg aacggatcca ggtagcagta ccggctgttg cagtcgaccg acagagcgat
      181 ccccttccgc gtccccttga cccgcagcac ggccgcgtcc gaccccggga ggaccagggt
      241 gttcgtccgg atcatgtggt cgtactgacg atagacccac ttcttgtcgg ccagttcggg
      301 gccgcccatc aggcgcaccc acgtctcccc gaggtccgaa ggcgacggga gccccgcggg
      361 atcgagtcgc tggagggcgt cctgcccagg gggtcgctcc gccggccggt cgtagacggg
      421 tgccttgtcg gtcagcgcgg cgatcgggat ctccgcgacc gtcttcccgc gccaccgtat
      481 ccggccgatc ccgtccccgg tgacctcgcc gatcaccgag acgtcgaggt cccacttctc
      541 gaagatttcc cggacctcgc tctcccgtcc cttcttcgcc acgatgagca tccgctcctg
      601 ggactccgaa agcatcagct cgtagggggt catcccctcc tcgcgctgcg gcacccggtc
      661 gaggtccatc aggaacccgg ttcctccccg ggaagccatc tcgaacgagg aggaggtgag
      721 gcccgccgcg cccatgtcct ggatcccgac gatcgcgtcg gtgcgcatca gctcaaggca
      781 cgcctccagg aggagcttct ccgtaaacgg atcccccacc tggacggtgg gccgcttctc
      841 ctcggacttc tcgtcgaact cgccggaggc catcgtcgcc ccgtggattc cgtcgcgccc
      901 ggtcttcgac cctacgtaga tgaccgggtt ccccacgccc gcggcggtcc cgagccagat
      961 ccgctcgtgg cgcaccacgc cgagggtgaa ggcgttcacc agtatgttcc cgtcgtagca
     1021 ctcgtcgaag gagacctccc cgccgacggt ggggacgccg atgcagttgc cgtatcccgc
     1081 gatccacgac accacgccgg aaaccaggta gcgcgtccgc gggtggtcgg gacgcccgaa
     1141 gcggagggag ttcagcgacg cgatggggcg ggctcccatg gtgaagacgt cccgcaggat
     1201 gccccccacg cccgtcgcgg ccccctggta cggctcgatg aaggacgggt ggttgtggct
     1261 ctccatcttg aagaccaccg cgagcccgtc gccgatgtcg acgatcccgg cgttttcccc
     1321 ggggccctgc aggacgcggg ggcccttcgt cgggaatttc ttcaggtgga tccgcgaact
     1381 cttgtaggag cagtgctcgc tccacatgac ggagaagatc ccgagctcgg tgaggcttgg
     1441 ggtgcgcccg aggattccga ggaccgtttc gtattcggcg gcggagagcc cgtgctcccg
     1501 agccagatcc ggagtgaccg ttttctcctt catgccgact tttcaccgag ccaggcgacc
     1561 atcgcgtcga acaggcggcg gccgtcgccg gacccaagcg ccatttccga agaccgttcc
     1621 gggtggggca tcatgccgag gacgttgcct ccctcgttgc agatcccggc gatgttccgc
     1681 gcggagccgt tcgggttgga ttccctcgtc acgttcccct ccgggtcgca at
//
LOCUS       DATGYW010000604         2333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_45647, whole genome shotgun sequence.
ACCESSION   DATGYW010000604 DATGYW010000000
VERSION     DATGYW010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45647"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..971)
                     /locus_tag="VK429_08480"
     CDS             complement(3..971)
                     /locus_tag="VK429_08480"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HLN91876.1"
                     /translation="MQKTRFVKDLKEGEPVRDLFLVANKALLTSNAGKPYLTLQLRDR
                     TGQIEARVWDRAEEIGKRFDRDDVVEVGGTAIAYQGRVQLKVHDVRREEGGTKDLSEY
                     LPVTKKGIEPLWKTLQEYIAGVKDKDLARLLAAVFPDPPETDVARRFRQAPGGKTMHH
                     DYIGGLLEHTVSVAAICRMLSAHYEGVDADLLLAGALLHDVGKVHELSYEGAFDYTDE
                     GRLLGHLYMGTEYVDRVCAALPGFPPEKAMLVKHIILSHHGELEYGSPKRPKTLEAIL
                     LHHVENMDAKATAFGDAIAELREGVRWTDYQRMFERYLFSGKFPKE"
     gene            complement(987..>2333)
                     /locus_tag="VK429_08485"
     CDS             complement(987..>2333)
                     /locus_tag="VK429_08485"
                     /inference="COORDINATES: protein motif:HMM:NF044849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91877.1"
                     /translation="DPFPKSPVRRPDPPPVVVGAGPAGLFAALTLARFGAPPVVLERG
                     RPVEERAGDVARFWRDGTLDPESNAQFGEGGAGTFSDGKLTTRIGDPLVDHVVSTFAE
                     FAGIPGLVKDAKPHVGTDRLRRFCRRMRAELASLGVPVRFGARVEELSAPGGEVRGVR
                     LAGGEEVRSPVVLLATGHSARDTVRRLFAQGVGMSGKAFAVGFRVELPQATIDRIQYG
                     PMAGKGLPPASFRLAARSPSGRGVYSFCMCPGGEVMNAASGEGQSPVNGMSARARNSG
                     FGNSGVVASVAPAEFGEAGAREGGPLAGIGFQEEIERRAFDRGGGGYGVPAANLLAFV
                     RGKALPPSPGRLLAPRVAPDDLRGILPGAVEDDIRFGLLRFGEAMRGFLTREATLYAV
                     ESRTSSPVRIERVNYESVTHKGLYPVGEGAGHAGGIVSSAVDGIRAALRILETYSS"
BASE COUNT          338 a          895 c          766 g          334 t
ORIGIN      
        1 atttactcct tcgggaactt cccggagaag agataccgtt cgaacatccg ttggtagtcg
       61 gtccagcgga ccccctcgcg cagctccgcg atcgcgtcgc cgaacgcggt cgccttggcg
      121 tccatgttct ccacgtgatg gagcaggatc gcctccagcg tcttgggccg cttgggagaa
      181 ccgtactcga gctccccgtg gtgggacagg atgatgtgct tcaccagcat cgccttctcc
      241 ggaggaaagc cggggagggc ggcgcagacg cggtccacgt actccgtccc catgtagagg
      301 tgccccagca ggcgcccctc gtccgtgtag tcgaacgccc cctcgtagga aagttcgtgc
      361 accttcccga cgtcgtgcag cagcgccccg gcgaggagca ggtcggcgtc caccccttcg
      421 tagtgggccg acagcatgcg gcagatcgcc gcgacggaga ccgtgtgctc cagcagcccc
      481 ccgatgtagt cgtggtgcat cgtctttccg cccggcgcct ggcggaagcg gcgcgccacg
      541 tccgtctccg gagggtcagg aaagacggcc gcgaggagtc gcgccaggtc cttgtccttg
      601 acccccgcga tgtactcctg gagcgtcttc cagagcggct cgatcccctt cttcgtgacc
      661 gggaggtact cggagaggtc cttcgtcccc ccttcctccc gccggacgtc gtggaccttg
      721 agctgcacgc gcccctggta cgcgatggcg gtgccgccca cctcgaccac gtcgtcccgg
      781 tcgaaccgct tcccgatctc ctcggcgcgg tcccacaccc tcgcctcgat ctgtcccgtc
      841 cggtcgcgca gctgcagggt caggtacggc tttccggcgt tgctggtcaa cagcgccttg
      901 ttcgcgacga ggaacaggtc gcggaccggc tccccctcct tgaggtcctt cacgaaacgc
      961 gtcttctgca tcgtcccccc tgctttctac gaggaatagg tttcgaggat gcggagggcg
     1021 gcgcggatcc cgtccacggc ggaggagacg atcccgccgg cgtgccccgc gccctccccg
     1081 acaggataca accctttgtg cgtcaccgac tcgtaattca cccgctcgat ccgcacgggg
     1141 gaggaggtcc gggactcgac ggcgtacagc gtcgcttcgc gggtgaggaa cccccgcatc
     1201 gcctccccga accggagcag accgaagcgg atgtcgtcct ccaccgcgcc cgggaggatg
     1261 ccgcgcaagt cgtccggggc gacccgcggg gcgaggaggc gtccggggga cggggggagc
     1321 gccttccccc ggacgaaggc gagcaggttc gcggccggca cgccgtaccc gccgccgccg
     1381 cggtcgaacg cccggcgttc gatctcctcc tggaaaccga tccccgccag ggggccgccc
     1441 tcccgcgccc ccgcctcccc gaactccgcg ggcgcgaccg acgccacgac cccgctgttc
     1501 ccgaacccgg agttgcgggc ccgtgcgctc atcccgttca cgggcgactg cccctccccc
     1561 gacgccgcgt tcatcacctc tccgccgggg cacatgcaga aggagtagac cccgcggccc
     1621 gagggggagc gcgccgcaag gcggaacgaa gcggggggaa gtcccttccc cgccatcggc
     1681 ccgtactgga tccggtcgat cgtcgcctgg ggaagctcca cccggaaccc gacggcgaac
     1741 gccttccccg acatcccgac gccttgcgcg aagagccgcc gcaccgtgtc gcgcgccgag
     1801 tggcccgtcg ccagcaggac gaccggggat cgcacctcct cgcccccggc gaggcgaacc
     1861 ccgcgcacct ccccccccgg cgccgacaac tcctcgaccc gcgcgccgaa ccggacgggg
     1921 acgcccaggg aagcgagctc cgcgcgcatc cgccggcaga agcgccggag ccggtcggtc
     1981 cccacgtgtg gcttcgcgtc cttgacgagc cccgggatcc cggcgaactc cgcgaacgtc
     2041 gacacgacgt ggtccacgag cgggtccccg atccgggtgg tgagctttcc gtccgaaaac
     2101 gtccccgcgc ccccctcccc gaactgggcg ttgctctcgg ggtcgagggt tccgtcgcgc
     2161 cagaaccggg cgacgtcccc ggcccgctcc tccaccggcc ggccgcgctc cagcacgacg
     2221 gggggggcgc cgaaccgcgc cagcgtgagg gcggcgaaca gcccggccgg cccggccccc
     2281 acgacgacgg gagggggatc cggccgacgc accggggatt tcggaaacgg gtc
//
LOCUS       DATGYW010000605         2074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_256656, whole genome shotgun sequence.
ACCESSION   DATGYW010000605 DATGYW010000000
VERSION     DATGYW010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_256656"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..750)
                     /locus_tag="VK429_08490"
     CDS             complement(<1..750)
                     /locus_tag="VK429_08490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91878.1"
                     /translation="MTAPPVGQPASDPTPEAAKARRERWAIGIVAVLVAALTLFEAHL
                     AAVGGTVTFSSNIVIFALINLNVIFVVLLIFLVTRNVFKILLDRRRNLLGAKLRSRLV
                     LIFICFSLIPTVLLFIAATNITTTSIKSWIGGRVGQALTGAIEIARERLEQEAGALSP
                     AAESAAAGLSGTVDPASFPRVLESARSLAPAGTALLFFEKGAEVARDGEVPTAVRGEI
                     LTRIKAIKGDGDGKGTMFGDGFAAAWRRATGG"
     gene            complement(747..1319)
                     /locus_tag="VK429_08495"
     CDS             complement(747..1319)
                     /locus_tag="VK429_08495"
                     /inference="COORDINATES: protein motif:HMM:NF025692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HLN91879.1"
                     /translation="MPMGVEVRVLIAFFTLTLLGFPSGGSLAGPPAPGISEISGTIRG
                     GEALVRFTILNAFTPEMVEALKSGIEITFKTTVEVERVYKNWFNQQMGQVRYTRSVRY
                     DALSRVYKLHRDDGDELLADVLSALDRMTRFEVVVPVTGKVEKGKPYRARVRARLDKV
                     GLSEPLRSIFFFSSLWDVETDWARGDLQAP"
     gene            complement(1371..1586)
                     /locus_tag="VK429_08500"
     CDS             complement(1371..1586)
                     /locus_tag="VK429_08500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013926570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2905 domain-containing protein"
                     /protein_id="HLN91880.1"
                     /translation="MWTSLGKGLILIGLLITAVGVLFLYSEKIGWIGRLPGDITIRRE
                     NVTVYFPLATCLLISVLLSLLIWLFRK"
     gene            complement(1589..>2074)
                     /locus_tag="VK429_08505"
     CDS             complement(1589..>2074)
                     /locus_tag="VK429_08505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012351782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction DNA helicase RuvB C-terminal
                     domain-containing protein"
                     /protein_id="HLN91881.1"
                     /translation="GTDELKEVIRRSSSALSIPVDDAGAGEIARRSRGTPRVANRLLR
                     RVRDFAQVTGDGTITREIADHALLRMEVDREGLDVMDRKILRVLLEKFGGGPVGVETI
                     SASVSEERDTIEDVYEPFLIQRGFLKRTPRGRVATPAAWKHLGIAAPKTSTQDSLFGE
                     T"
BASE COUNT          376 a          683 c          691 g          324 t
ORIGIN      
        1 gcctccggtg gcgcggcgcc aggcggcggc gaatccgtcc ccgaacatgg tccccttccc
       61 gtcgccgtcc cccttgatcg ccttgatccg tgtgagtatc tcccccctca ccgccgtcgg
      121 aacctcgccg tcccgggcga cttcggcgcc cttctcgaag aagagaaggg cggtgccggc
      181 gggagccagg ctccgggccg attcgagaac ccgcgggaag gaggcgggat cgaccgtccc
      241 cgacagcccg gcggcggcgc tctctgcggc cggtgaaagg gccccggcct cctgctccag
      301 gcgttcccgg gcgatctcga tggcgccggt gagggcctgc cccaccctgc cgccgatcca
      361 cgacttgatg ctcgtcgtcg tgatgttcgt cgccgcgatg aagagcagga ccgtcgggat
      421 gagggagaag cagatgaaga tgaggacgag ccgggaccgg agcttcgccc ccaggaggtt
      481 ccgtcgccgg tccaggagga tcttgaagac gttccgcgtg acgaggaaga tcaggaggac
      541 gacgaagatg acgttcaggt tgatcagcgc gaagatgacg atgttgctgg agaacgtgac
      601 cgttccgcca accgccgcca ggtgggcctc gaagagcgtc agggccgcga cgaggaccgc
      661 gacgatcccg atggcccacc gctctctgcg cgctttcgcg gcttccgggg tcgggtccga
      721 agcgggctgt ccgacgggag gggcggtcac ggcgcctgga ggtccccgcg ggcccagtcg
      781 gtctcgacgt cccacaggga ggagaagaag aagatggaac ggagcggttc ggagagcccc
      841 accttgtcca gccgggcgcg cacgcgcgcc cggtacggtt tccccttttc caccttcccg
      901 gtcaccggga cgaccacctc gaaccgggtc atccggtcaa gcgcggaaag gacgtccgcc
      961 agcagctcgt ccccgtcgtc acggtggagc ttgtagacgc gcgacagggc gtcgtaccga
     1021 acggagcggg tgtaacggac ctgtcccatc tgctggttaa accaattctt gtagacccgc
     1081 tcgacctcga cggtggtctt gaaggtgatc tcgatcccgg acttcaacgc ctcgaccatt
     1141 tcgggggtaa acgcattcag aatggtaaag cggaccaggg cctcgccgcc acggatcgtc
     1201 ccggagattt ccgaaatccc gggggcgggc ggacccgcaa gagagccccc ggacggaaac
     1261 cccagcagcg tcagcgtgaa aaaggcaatc aggacgcgca cttccacccc catgggcatt
     1321 atacccggac gccgtgaacc tgcaaccgtc cgcgacgccc tccagggcgc ctatttccgg
     1381 aacagccaga tcagcaggga gagaagcacg ctgatgagga gacatgtcgc gagcggaaaa
     1441 tagacggtga cgttttcgcg acggatcgtg atatctccgg ggagccgccc gatccagccg
     1501 atcttttccg aatagaggaa gaggacaccg accgcggtga tgaggaggcc gatgaggatg
     1561 agccctttcc cgagggaagt ccacacggtc acgtctctcc gaacagcgaa tcctgcgtgg
     1621 acgtcttcgg ggccgcgatt ccgagatgtt tccacgcggc gggggtggcc acccttcccc
     1681 gcggggtgcg cttgaggaaa ccgcgttgga tgagaaacgg ctcgtagaca tcctcgatcg
     1741 tgtcccgttc ctcgctgacg gaggcggaga tcgtctccac gccgacggga cctcccccga
     1801 acttttcgag gagcacccgc aggatcttcc gatccatcac gtcgagcccc tcacggtcca
     1861 cctccatccg cagcagagcg tgatcggcga tttcccgggt gatcgtgccg tcccccgtca
     1921 cctgggcgaa gtcgcggacg cgccgcaaga ggcggttcgc gacgcgcggc gttccacggg
     1981 agcgacgggc gatctccccc gccccggcgt cgtcgacggg aatggagagg gcggaggagg
     2041 aacgccggat cacctccttc agttcgtccg tccc
//
LOCUS       DATGYW010000606         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_91363, whole genome shotgun sequence.
ACCESSION   DATGYW010000606 DATGYW010000000
VERSION     DATGYW010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91363"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1151
                     /locus_tag="VK429_08510"
     CDS             <1..1151
                     /locus_tag="VK429_08510"
                     /inference="COORDINATES: protein motif:HMM:NF012652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HLN91882.1"
                     /translation="VCGQILLHAASRGMSGVRMFPVGRDVVVEGRSEEKTVRLLSFPL
                     RFRKPFFDAFLELAGVPGGPDLPPETIFQLESGTEVVALQASFLRGLSGPEVIIKILP
                     DLRAGISLDSVGFNPGQLDITEKVLRKGNGLFLVSSPGPEGVATTLFAMLREVYEPGL
                     RVITVEERHRFRNEGYIQLDRRQAEDRYSGDWSLLAESLEPDILMIEHLPDPAALADL
                     LHLAQGGSFVLCGIRRFNFDRALRTLLTLDVDPFILAHVMRLVMHQRLVKVLCMECRR
                     PVPARPSLRMVGERYRGELERTVADASFYLPSGCPKCGGTGYSGRVALIELIPFTPGV
                     QNIVSSDGTLEEKLSQLMAEDLYSAAQSVQEMLKRGMVTYEDVAPFFR"
     gene            1218..>2079
                     /locus_tag="VK429_08515"
     CDS             1218..>2079
                     /locus_tag="VK429_08515"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLN91883.1"
                     /translation="MKETTLHRMILNRIAEGGDSVRYMVPADHGYTPVTYRQVGVASR
                     EIGLGLMALGLSRGDRVAILATTRLEWCLADIGAILGGFVTVPIYPSNLPDQVEYILA
                     HSRARAVFAEDELQYNKIAGVRSRLPHLSSIVMMTGGAEGKEGATTLSALREIGKAHG
                     SGNPGALEARAEEILPTDDLTIIYTSGTTGPPKGVVTRHSNYAFNVTSALEAVNVPRG
                     SMFLQFLPLAHSLGRLEHFLSFDAMAVSSFARSLQTVAEDLAAVRPEIMVSVPRLYEK
                     FYARVLAKVEE"
BASE COUNT          322 a          681 c          689 g          387 t
ORIGIN      
        1 gggtctgcgg gcagatcctg ctgcacgcgg cgtcccgcgg aatgtcgggc gtccggatgt
       61 tccccgtcgg ccgggacgtg gtggtcgagg gccggtcgga ggagaaaacc gtgcgcctcc
      121 tctccttccc tctccggttc cggaaaccgt tcttcgacgc gttcctggaa cttgccgggg
      181 tcccgggcgg tccggacctc cccccggaga cgatcttcca actcgagtcc gggaccgagg
      241 tcgttgccct ccaggcaagc ttcctcaggg ggctctccgg ccccgaggtg atcatcaaga
      301 ttctccccga cctgagggcg gggatctccc tcgactccgt cggcttcaac cccggccagc
      361 tcgatatcac agaaaaggtt ctacgcaagg gaaacgggct cttcctcgtg tcgtcccccg
      421 gacccgaggg ggtcgccacc accctgtttg cgatgctccg cgaggtgtac gagcccggcc
      481 ttcgcgtcat caccgtcgaa gagcggcacc ggttccgtaa cgaggggtat atccagctcg
      541 accggaggca ggcggaggac cggtattccg gagactggtc cctcctggcg gagtcgctcg
      601 aacccgacat cctgatgatc gagcacctgc ccgatccggc ggccctcgcc gacctgctcc
      661 acctcgcgca aggcgggtcc tttgttctgt gcggtatccg gaggttcaac ttcgaccggg
      721 cgcttcgcac gcttctgacc ctcgacgtgg acccattcat cctggcgcac gtaatgcgcc
      781 ttgtaatgca ccagcggctg gtgaaggtgc tctgcatgga atgccgtcgg cccgtccctg
      841 cgaggccctc cttgcggatg gtgggggagc ggtaccgagg cgagctggag cggaccgtcg
      901 cggatgcctc gttctacctt ccttccgggt gtccgaagtg cggcgggacg ggttattcgg
      961 gccgggtggc gctcatcgag ctgatcccct tcactccggg ggtacagaac atcgtttcgt
     1021 cggatggtac gctcgaggag aaactgtcgc aactgatggc ggaagacctg tactccgccg
     1081 cgcaatcggt gcaggagatg ctcaagcgcg ggatggttac ctacgaggac gtcgctccgt
     1141 tcttccgtta atatggaatg cggtcggttc cgggtacggt ttgcttcggg cggacaaacg
     1201 gaagacgagg gggtgccatg aaggagacga cgcttcaccg gatgatcctg aaccggatcg
     1261 ccgagggcgg ggactcggtc cggtacatgg tcccggccga tcacggctac acgccggtga
     1321 cgtaccggca ggtcggcgtc gcgtcgcggg agatcggtct cgggctgatg gcgctcgggc
     1381 tgtcgcgagg ggaccgcgtt gcgatcctcg cgacgacgcg cctggaatgg tgccttgcgg
     1441 acatcggggc catcctcggc gggttcgtca cggtgccgat ctacccctcg aacctccccg
     1501 accaggtgga atatatcctg gcccactcgc gcgcgcgggc cgtattcgcc gaggacgagt
     1561 tgcagtacaa caagatcgcg ggagtccgtt cccgcctgcc tcatctctcg agtatcgtga
     1621 tgatgaccgg cggcgccgag gggaaggagg gtgctacgac cctgtccgcg ctgcgcgaga
     1681 tcggtaaggc gcacggttcc gggaatcccg gggccctcga ggcgcgtgcg gaggagatcc
     1741 ttcccacgga cgacctgacg atcatctata cctccggcac caccggcccc ccgaaagggg
     1801 tcgtgacgcg gcacagcaac tacgccttca acgtgacctc ggcgctggaa gcggtcaacg
     1861 ttccccgggg gtcgatgttc ctccagttcc tccctctggc gcactctctc gggcgcctgg
     1921 agcacttcct ctccttcgac gcgatggcgg tctcctcctt cgcccgctcc ctgcagacgg
     1981 tcgcggagga cctcgcggcg gtccgtccgg aaatcatggt gagcgtgccc cggctctacg
     2041 agaagttcta cgcccgcgtg ctcgcgaagg tcgaggagg
//
LOCUS       DATGYW010000607         1588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_480220, whole genome shotgun sequence.
ACCESSION   DATGYW010000607 DATGYW010000000
VERSION     DATGYW010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_480220"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(265..1386)
                     /gene="fbp"
                     /locus_tag="VK429_08520"
     CDS             complement(265..1386)
                     /gene="fbp"
                     /locus_tag="VK429_08520"
                     /EC_number="3.1.3.11"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020256005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1,6-bisphosphate aldolase/phosphatase"
                     /protein_id="HLN91884.1"
                     /translation="MKVTLSVIKADIGSIGGHIRPSAKLLETVRSKVAELGKGLLIDA
                     YVGFTGDDVAILMSHTGGTGNAKVHKLAWDAFIAGTAVARAEGLYGAGQDLLKDSFSG
                     NVKGMGPAVAEMEFDERPNEPFILFAADKTDPGAYNLPSYLGFADPMFSSGLILSPKV
                     GKGFTFRIMDVANTEGDKVIDLSAPEDLYDIAALLRDQERFVVESIRSRATGEIAAVV
                     STTRLHNIAGKYTGKDDPVMLVRTQGNFPATGEILAPYTIGHLVAGFMRGSHHGALMP
                     VPRNTGISFFDGPPIVSALAFCVKEGRFTEPADAFDHPYWEYVRGRVSAKSEELRRQG
                     FFGPAMLPYSELEYGGIVERMKAMAPKFRVLGGKEPVEA"
     gene            complement(1399..>1588)
                     /locus_tag="VK429_08525"
     CDS             complement(1399..>1588)
                     /locus_tag="VK429_08525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91885.1"
                     /translation="EKACGKTAVRRFKPPQPGDVPVTYADISRARKEIGYDPRTPIGR
                     GVSLFVEWYRREETARPT"
BASE COUNT          248 a          561 c          489 g          290 t
ORIGIN      
        1 ggctcatggg cgaaacgata ccacatgacc tcccaaaaga aaaagcaagc tccctccggc
       61 tgcgccgcct cggagagggg gctccgttcg tggctcgccg tgcgttgaac ctgcacggct
      121 gcgctttacc tcacttcgcc ccccctcctg cggcgactcc gccggatcct cccgttgtgc
      181 tccccgtttt tcctactgcg ggggtacccc agggagcgcg attcgtacgg gaatggggcg
      241 cctcccctcc tcccgccgat gggcctaggc ctcgacgggt tcctttcctc cgagcacgcg
      301 gaacttcggc gccatcgcct tcatccgctc gacgattccg ccgtactcga gctcgctgta
      361 cggcagcatc gcggggccga agaacccttg ccggcgaagc tcttcggact tggccgacac
      421 ccgcccccgg acgtactccc agtacgggtg gtcgaacgcg tcggccggct cggtgaaccg
      481 cccctccttt acgcagaagg cgagggccga gacgatcggc ggaccgtcga agaaggagat
      541 ccccgtgttc cgcggaaccg gcatcagcgc cccatggtgg cttccccgca tgaagccggc
      601 taccaggtgg ccgatggtgt agggggcgag gatctccccc gtggcgggaa agttcccctg
      661 cgtccggacc agcatcaccg gatcgtcctt ccccgtgtac ttccccgcga tgttgtggag
      721 ccgggtggtg ctgaccacgg cagcgatctc cccggtggcg cgggagcgga tcgactcgac
      781 gacgaaccgc tcctggtcgc gcagcagcgc cgcgatgtcg tagaggtcct cgggtgccga
      841 taggtcgatc accttgtccc cttccgtgtt cgcgacgtcc atgatgcgga aggtgaaccc
      901 cttccccacc ttcggggaga ggatgaggcc ggaggagaac atcgggtcgg cgaaaccgag
      961 ataggatgga aggttgtacg ctcccgggtc ggtcttgtcc gccgcgaaca ggatgaacgg
     1021 ctcgttgggg cgctcatcga actccatctc cgccaccgcg gggcccatcc ccttcacgtt
     1081 gccggagaac gaatccttca ggaggtcctg ccccgcgccg tagagcccct cggccctcgc
     1141 caccgcggtc cccgcgatga atgcgtccca cgccagtttg tggaccttcg cgttccccgt
     1201 ccccccggtg tgggacatca ggatcgccac gtcgtccccg gtaaaaccga cgtaggcgtc
     1261 gatcagcagc cctttcccga gctcggcaac cttcgaccgc accgtttcga gcaatttcgc
     1321 gctcggacgg atgtgccccc cgatggaacc gatgtccgcc ttgatgaccg acaacgtgac
     1381 cttcatggaa gcctcctttc aggttggtct tgcggtttcc tcacgccggt accattcgac
     1441 gaaaagggaa acgccgcgcc cgatcggcgt gcgcgggtcg taaccgatct ctttcctcgc
     1501 gcgggagatg tccgcgtagg tcaccgggac gtccccgggc tgcggcggct tgaagcgccg
     1561 cacggcggtc ttcccgcacg ccttctct
//
LOCUS       DATGYW010000608         2269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_425887, whole genome shotgun sequence.
ACCESSION   DATGYW010000608 DATGYW010000000
VERSION     DATGYW010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425887"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..>2269
                     /gene="gyrA"
                     /locus_tag="VK429_08530"
     CDS             153..>2269
                     /gene="gyrA"
                     /locus_tag="VK429_08530"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020877634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HLN91886.1"
                     /translation="MDLFQKQAQPRAIQDEMRQSYLDYAMSVIVGRALPDVRDGLKPV
                     QRRILYAMHELGNEYGKPYKKSARIVGDVIGKYHPHGDNAVYDALVRMVQEFSLRYPL
                     IDGQGNFGSVDGDSAAAMRYTEVRMAKVTGELLSDLDKETVETIPNYDGSLQEPRVLP
                     SRVPNLLVNGSAGIAVGMATSIPPHNLGEVIGALLALIGNPDITVDELMEHVPAPDFP
                     TGGILYGLDGVRDAYRTGRGSVQIRARAFIEKAKKGDRESIVVTEIPYQVNKSRLIER
                     MAELVRNKEIEEISDLRDESDRDGMRVVVELKKDAVAEVVLNNLYKQTQMQTSFGVQL
                     LAIVQNRPRTMNLKELLEEFLAFRKEVVTKRTLFLLRKAEAREHILLGLSIALDHLDA
                     VIRLIRASKDPKEAKEGLVAKFGLSEIQAQAILDMRLQRLTGLEREKILQELKEVRAE
                     IVRLKKILGEEAELLRVIGQEFREIRDAYGDARRSEIQRETKDLRLEDLIVDEEMVVT
                     VSHTGYIKRNPISLYRTQRRGGRGKVGMGTKEEDFVSMLFIASMHTYVLFFSDQGKVY
                     WLKVHELPEAGRASKGRAIVNLLSLSPGEEIASILPVREFTEGKFVMTVTSRGVIKKT
                     DLMEYSRPRAGGIISMGLNEKDRLIATALTTGRDEVFLSTREGMSIRFHEEDVRPMGR
                     AAVGVRGIDLEEGDLVVGMEILKP"
BASE COUNT          431 a          705 c          777 g          356 t
ORIGIN      
        1 ggtgggcgga acctttcgta acacgctgta tttattgtgt tttcattgat atgcccttcc
       61 cccggattat gatagaataa tttgctccac aaatcgtgaa gcagcgttcc ggccgcgtcg
      121 gtccgcaata cccaaggagc aacgaccaca ccatggacct gttccagaag caggcacagc
      181 cccgcgcgat ccaggacgag atgcgccaga gctacctcga ttacgcgatg agcgtgatcg
      241 tggggcgggc gctccccgac gtacgcgacg gcctgaaacc ggtccagcgc cgcatcctct
      301 acgccatgca cgagctgggg aacgagtacg gcaagccgta caagaaatcc gcccgcatcg
      361 tcggcgacgt catcggtaaa tatcatccgc acggcgacaa cgcggtgtac gacgccctcg
      421 tccgcatggt gcaggagttc tcgctgcggt accccctgat cgacgggcag gggaacttcg
      481 gatcggtgga cggcgactcg gccgcggcga tgcggtacac cgaggtccgg atggccaagg
      541 tgacggggga gctcctctcc gacctcgaca aggagaccgt cgagacgatc ccgaactacg
      601 acggttcgct ccaggagccg cgcgtccttc cgtcccgcgt ccccaacctg ctggtgaacg
      661 ggagcgccgg gatcgccgtc gggatggcga cctccattcc gccccacaac ctcggcgagg
      721 tgatcggcgc cctgctcgcc ctgatcggca accccgacat cacggtcgac gagctgatgg
      781 agcacgtccc ggcgcccgat ttccccaccg gcgggatcct gtacggtctc gacggcgtgc
      841 gcgacgcgta ccgcacgggg cgcggcagcg tccagatccg cgcccgggcc ttcatcgaga
      901 aggcgaagaa gggggaccgg gagtcgatcg tcgtcacaga gatcccgtac caggtgaaca
      961 agtcccgcct catcgagcgg atggcggagc tggtgcggaa caaggagatc gaggagatct
     1021 cggacctgcg cgacgagtcc gaccgcgacg ggatgcgcgt ggtcgtggag ctgaagaagg
     1081 acgcggtcgc cgaggtcgtc ctcaacaacc tgtacaagca gacgcagatg cagacctcct
     1141 tcggagtgca gctgctggcg atcgtccaga accggccccg gacgatgaac ctgaaggagc
     1201 tcctcgagga gttcctcgcc ttccggaagg aggttgtcac caagcggacc ctgttcctgc
     1261 tgcggaaggc ggaggcccgg gagcacatcc tgctcgggct ttcgatcgcc ctcgaccacc
     1321 tcgacgcggt catccggctg atccgggcct cgaaggaccc gaaggaggcg aaggaaggcc
     1381 tcgtggcgaa gttcggcctg tcggagatcc aggcccaggc gatcctcgac atgcggctgc
     1441 agcggctgac cgggctggag cgcgagaaga tcctgcagga gctgaaggag gtccgtgcgg
     1501 agatcgtgcg gctgaaaaag atcctcggcg aggaggcgga gcttctgcgc gtgatcgggc
     1561 aggagttccg cgagatccgg gacgcctacg gcgacgcccg ccgttccgag atccagcgcg
     1621 agacgaagga cctgcggctc gaggacctca tcgtggacga ggagatggtg gtcaccgtct
     1681 cccacacggg gtacatcaag cggaacccga tcagcctcta ccggacgcag cggcgcgggg
     1741 ggcgcgggaa ggtcggcatg gggacgaagg aggaggattt cgtctcgatg ctcttcatcg
     1801 cctcgatgca cacctacgtc ctcttcttct cggaccaggg gaaggtgtac tggctgaagg
     1861 tccacgaatt gccggaggcg gggcgcgcct cgaaggggcg ggccatcgtg aacctcctct
     1921 ccctctcccc cggcgaggag atcgcgtcga tccttcccgt ccgcgagttc acggagggga
     1981 agttcgtgat gacggtcacg tcgcggggcg tcatcaagaa gacggatctg atggagtatt
     2041 cccggccgcg ggcgggcggg atcatctcca tggggctgaa cgagaaagac cggctgatcg
     2101 caaccgccct caccacgggg agggacgagg tgtttctctc cacccgcgag gggatgtcga
     2161 tccggttcca cgaggaggac gtccggccga tggggcgcgc ggcggtgggc gtgcgcggca
     2221 tcgacctcga ggagggggac ctcgtcgtgg ggatggagat cctgaaacc
//
LOCUS       DATGYW010000609         2639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_91536, whole genome shotgun sequence.
ACCESSION   DATGYW010000609 DATGYW010000000
VERSION     DATGYW010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2639
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91536"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..534)
                     /gene="lptA"
                     /locus_tag="VK429_08535"
     CDS             complement(16..534)
                     /gene="lptA"
                     /locus_tag="VK429_08535"
                     /inference="COORDINATES: protein motif:HMM:TIGR03002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0001530 - lipopolysaccharide binding
                     [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HLN91887.1"
                     /translation="MRISRVIVVLSLVAAMAGDAGAQERPNEASRDLGSRPIDVTADR
                     LSADSVRNTVTFEGNVVAKQADVTLYADRIQAGYSRESGSIDRIEAEGNVRFLQEGRE
                     ARSARATFHNLEQRIVLSGGATLRQGQNTVQGETVTIFLRENRSMVTGGKDGGRVQAV
                     INPKGILETSPK"
     gene            complement(539..1117)
                     /locus_tag="VK429_08540"
     CDS             complement(539..1117)
                     /locus_tag="VK429_08540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91888.1"
                     /translation="MTLRLLPWAAIALLVLVLAVRSALPTNVVAVPTGTPGQESTGGG
                     PEIRLGPADVRELHDDGSWNRLDAENAVYGYASRTVSAGGVTVFLGEGSPFAGTTVRA
                     PRAVWDLDGKTILLPEGCRVARGGGWTGELSPATLDLAGSVLRVPGPARIEGPGVSVQ
                     GKSLAWEWVGGKITMESSRSVLPPGKRLGRKG"
     gene            complement(1114..1671)
                     /locus_tag="VK429_08545"
     CDS             complement(1114..1671)
                     /locus_tag="VK429_08545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011341688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HLN91889.1"
                     /translation="MSGPVVRQGAAAAAARVRLFLTDVDGVLTDGGIVYDAAGVETKR
                     FHVRDGHGIKMLQRAGVAVGIITGRTSEVVAIRARELGIDIVRQGEFDKVAAWGEILA
                     GTGILPSETAYAGDDIVDLPLLRTVGFSAAPSDAEPYVLEAVHFVASRPGGHGAVREI
                     VEFLLRSRGSWDSVTRKYFSEGAAR"
     gene            complement(1668..2636)
                     /locus_tag="VK429_08550"
     CDS             complement(1668..2636)
                     /locus_tag="VK429_08550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015837877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HLN91890.1"
                     /translation="MYDRIGRAGRVLAVEAAAIEGLRGKLDERFGKAVDLLMAARGKV
                     VVSGMGKSGLIARKIAATLASTGTPAFFLHPAEGIHGDIGMVRRGDVVIALSNSGETE
                     ELVRLMPVFQRIGLPVIALTGDAGSTLGRYADVCLDVGVREEACPLGLAPTASTTASL
                     AMGDALAVVLFEEKGFSEEDFAKLHPGGALGRRLQTISDLMHTGDEIPLVSPDTPLKD
                     ALFTISAKRLGVTGVVDRDGRLAGIITDGDVRRATSAGVDLFNTTAGSVMTRSPKGIA
                     STELAAAALRRMEEFSITSLFVFDPRDSQRPVGIVHVHDLLKAGVG"
BASE COUNT          384 a         1009 c          847 g          399 t
ORIGIN      
        1 tgtgccgccg tccggtcact tcggtgacgt ctccaggatc cccttggggt tgatcaccgc
       61 ctggacgcgg ccgccgtcct tgccgcccgt caccatggac cggttctccc gcaggaagat
      121 ggtgaccgtt tctccctgga cggtgttctg tccctgccgg agcgtcgcgc ccccggagag
      181 gacgatccgc tgctcgaggt tgtggaaggt ggccctcgcg gaacgggcct cccgtccctc
      241 ctggaggaac cggacgttgc cttccgcctc gatccggtcg atcgatcccg actcgcggga
      301 gtagccggcc tggatccggt cggcgtagag cgtgacatcg gcctgcttcg ccaccacgtt
      361 cccctcgaag gtcacggtgt tacgcacgct gtcggcgctg aggcggtcgg cggtgacgtc
      421 gatcgggcgg cttcccagat cccgcgaggc ctcgttcggg cgttcctgcg ccccggcgtc
      481 gccggccatg gccgcgacga gcgaaaggac gacaatgacc cgggaaatcc tcatggtctc
      541 accccttcct gccgagacgc ttccccggcg ggaggacgct tcggctcgac tccatcgtga
      601 tcttccctcc cacccattcc caggcgaggc tcttcccctg gacggagacg cccgggcctt
      661 cgattctcgc cggtccgggg acccgaagga ccgatcccgc caggtccagc gtcgccgggg
      721 agagttcccc ggtccagccg ccaccccgtg ccacccggca cccctcggga agcaggatgg
      781 tctttccgtc gaggtcccac accgcgcgcg gcgcgcggac ggtcgtcccg gcgaacgggg
      841 agccctcccc cagaaaaacc gtcacgcccc ccgcggagac cgtcctgctt gcgtacccgt
      901 agaccgcgtt ctccgcgtcg agccggttcc acgaaccgtc gtcgtggagt tcccgcacgt
      961 ccgcgggccc cagccggatc tccggcccgc cgccggtgct ctcctgtccc ggcgtccccg
     1021 tcggcacggc gacgacgttc gtcgggaggg cggaccggac cgcgagaacc agcaccagga
     1081 gggcgatcgc ggcccatggc aggaggcgaa gagtcatcgt gccgccccct ccgaaaagta
     1141 tttcctggtc accgaatccc atgaaccgcg cgaacggagg aggaattcga cgatctcccg
     1201 caccgctccg tgcccgccgg gtcgcgatgc gacgaagtgc accgcttcga gaacgtacgg
     1261 ttccgcgtcc gagggcgccg ccgagaaccc gacagtccga agcagcggga ggtccacgat
     1321 gtcgtccccc gcgtaggcgg tctcggaggg gaggatgccg gtcccggcca ggatctcgcc
     1381 ccatgccgcc accttgtcga actccccctg ccggacgatg tcgatcccca gttccctcgc
     1441 ccggatcgcg accacctcgg aggtgcgccc cgtgatgatc ccgaccgcga cccccgcgcg
     1501 ctgcagcatc ttgatcccgt ggccgtcccg cacgtggaac cgcttcgtct cgaccccggc
     1561 ggcgtcgtag acgatccctc cgtccgtcag cacgccgtcc acgtcggtga ggaacaggcg
     1621 gacccgcgcc gccgccgccg ccgccccctg ccggaccacc gggccgctca tccgacgccc
     1681 gccttgagga gatcgtgaac gtggacgatc cccaccgggc gctgggaatc gcgggggtcg
     1741 aagacgaaca ggctggtgat cgaaaactcc tccattctcc gcaacgccgc cgccgcgagt
     1801 tcggtcgacg cgatcccctt cggcgatcgg gtcatgacgg agcccgcggt cgtgttgaaa
     1861 agatccacac ccgccgaggt cgcccgccgg acgtcgccgt cggtgatgat ccccgccaga
     1921 cgcccgtcgc ggtcgacgac gccggtcacc cccagccgct tcgcgctgat cgtgaacagg
     1981 gcgtctttca gcggcgtgtc cggggagacc agcgggatct cgtcccccgt gtgcatcagg
     2041 tccgagatcg tctgcaggcg ccggccaagg gcgccgccgg ggtgcagctt cgcgaaatcc
     2101 tcctcggaga atcccttctc ctcgaagagg acgaccgcca gcgcgtcccc catcgccagg
     2161 ctcgcggtgg tcgaggccgt gggcgccagc ccgagagggc acgcctcctc ccgcaccccc
     2221 acgtcgaggc acacgtcggc gtaccggccg agcgtggagc ccgcgtcccc cgtgagggcg
     2281 atcaccggga gcccgatccg ctggaagacg ggcatcaggc ggacgagctc ctcggtttcc
     2341 ccggagttgg agagggcgat caccacgtcc ccgcgccgca ccatcccgat gtccccgtgg
     2401 attccctccg cggggtggag gaagaacgcc ggggtcccgg tggaggcaag agtcgcggcg
     2461 atcttccggg cgatcagccc cgacttcccc atcccggaga cgacgacctt tccccgggcc
     2521 gccatcagca ggtccaccgc cttcccgaac cgctcgtcga gctttccccg aagcccctcg
     2581 atcgccgcgg cctccacggc gaggaccctc ccggcgcgcc cgattctgtc atagatcgg
//
LOCUS       DATGYW010000610         1843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_520599, whole genome shotgun sequence.
ACCESSION   DATGYW010000610 DATGYW010000000
VERSION     DATGYW010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_520599"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VK429_08555"
     CDS             <1..445
                     /locus_tag="VK429_08555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017950745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91891.1"
                     /translation="ELGRHGSPGSGPSPGECLVMVGLPPDRYLQRTVDATLSGGERKR
                     VELASVLSMGPKLSILDEPDSGIDALSLNRILDAVRILAKNGTSVLLITHQNEIAASA
                     DRASSLCDGTILKTGDPLAIGRFFQNHCRECPHGSTSPGEVLIHG"
     gene            438..1388
                     /locus_tag="VK429_08560"
     CDS             438..1388
                     /locus_tag="VK429_08560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018195508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufD family Fe-S cluster assembly protein"
                     /protein_id="HLN91892.1"
                     /translation="MGDTTEEFRAMSNAYEAGGGDPASFSDGRIAGLMVSHRKILRSN
                     DAIGVHIEGEETPTGVRAKITVDPGVHVEHPVHLCFGVLPKEGTQEIVSEFLVGEGAK
                     ARFLAHCVFPNAVKVRHVMDARIHVGKHADLEYSETHYHGEEGGVEVLPTAKITIDEG
                     GSYRSLFKLIQGAAGELRIDYEADIGKDATCELDARVYGKRNDVIRVKESLFLNGEKS
                     RGLAKSRIVASGHCVSEVVGEAVGNAPGARGHVDCVEIVKGKDARVSAVPRLLVTDDR
                     AKLTHEAAIGSVDKKQVETLMARGLTEEEAVDIVVRGILR"
     gene            1618..>1843
                     /locus_tag="VK429_08565"
     CDS             1618..>1843
                     /locus_tag="VK429_08565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020094614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdenumtransferase MoeA"
                     /protein_id="HLN91893.1"
                     /translation="MFASLEDTIARAAALVRPPRKTRTVPLPEAGGEVLASDIAADRN
                     IPPFPRAAMDGFAVVWTGREDQVPYRVIGTV"
BASE COUNT          366 a          566 c          612 g          299 t
ORIGIN      
        1 ggaactggga aggcacggct ctcctggcag cggcccttct ccgggggaat gcctcgtcat
       61 ggtgggtctt ccgccggaca ggtatctcca gcgaaccgtc gacgccacct tgagcggcgg
      121 cgagcggaaa cgcgtggaac tggcatccgt cctctcgatg ggccccaagc tctccatcct
      181 cgacgaaccg gattccggca tcgacgcgct ctcccttaac cggatcctgg atgccgtgcg
      241 aatcctcgcg aagaacggga cctccgtgct tctgatcacc caccagaacg aaatcgccgc
      301 atcggcggac cgggcttcct ccttgtgcga cggcaccatc ctgaagaccg gcgatcccct
      361 cgcgatcggc cgctttttcc agaaccattg cagggagtgc ccccatggga gcacgtctcc
      421 cggggaggtc ctgatccatg ggtgacacca ccgaggaatt ccgggcgatg tccaacgcgt
      481 acgaagcggg cggcggcgac ccggcgtcat tctccgacgg aagaatcgcc gggctgatgg
      541 tgagccatcg gaagatcctt cgcagcaacg acgccatcgg agtccacatc gagggagaag
      601 agaccccgac cggtgtcagg gcgaagatca cagtcgatcc cggggtccac gtcgagcacc
      661 cggtccacct gtgcttcgga gtgctcccga aggaagggac gcaggagatc gtctcggaat
      721 tcctggtggg ggaaggggcg aaagcacgct ttctcgcgca ttgcgtgttc ccgaacgccg
      781 tgaaggtccg ccacgtgatg gacgcgcgga tccacgtggg gaagcatgcc gatctcgaat
      841 actcggaaac gcattaccac ggcgaagaag gcggagtcga ggtgttgccc acggcaaaga
      901 tcaccatcga cgagggaggg tcctaccgaa gcctgttcaa gcttatccag ggagcggccg
      961 gtgagctgcg gatcgactac gaggccgaca tcgggaagga cgccacttgc gaactggacg
     1021 cccgggtcta cgggaaaagg aacgatgtga tccgcgtcaa ggagtccctt ttcctgaacg
     1081 gggagaagtc gagaggactc gcgaagagcc ggatcgtcgc ctccggccat tgcgtgagcg
     1141 aggtcgtcgg ggaggcggtc gggaacgcgc cgggggcgag gggccacgtc gactgcgtgg
     1201 agatcgtgaa ggggaaagat gcgcgcgtca gcgccgtccc gaggctcctc gtgaccgatg
     1261 accgcgcaaa actgacgcac gaggcggcca tagggagcgt ggacaagaag caggtcgaga
     1321 cgctgatggc acgggggctg acggaggagg aagcggtgga tatcgttgtc aggggaatcc
     1381 ttcggtgatc ccccctcgag ggggcaggcc gcaaccgttt ccccccggat ggcgttaacg
     1441 tcgagcaaag caccgacctt gtccggcacg taacgaaact tcggacgttt cagaaggaga
     1501 tggatccccc ggggagatca gcattgggat agtatcggat tcgatatccc tgcataccgc
     1561 gcttcgccat gcgggactat gatattttgt tacgacttcg catggaggat tccccccttg
     1621 ttcgcttccc tcgaagacac catcgccagg gccgccgcgc tcgtccgccc cccgcgaaag
     1681 acccggaccg taccccttcc ggaggccggg ggagaagtcc tggcaagcga tatcgccgcg
     1741 gaccggaaca tccccccgtt tccccgcgct gcgatggacg gcttcgccgt cgtgtggacc
     1801 ggcagggagg accaggtccc ctaccgggtg atcgggaccg tca
//
LOCUS       DATGYW010000611         2108 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_426176, whole genome shotgun sequence.
ACCESSION   DATGYW010000611 DATGYW010000000
VERSION     DATGYW010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426176"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            181..>2108
                     /locus_tag="VK429_08570"
     CDS             181..>2108
                     /locus_tag="VK429_08570"
                     /inference="COORDINATES: protein motif:HMM:NF014757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA
                     hydratase family protein"
                     /protein_id="HLN91894.1"
                     /translation="MFPKIRKVAVLGAGVMGSGIAAHLANAGISCLMLDIVPPGLSDD
                     DKKKGVTEKSPAFRNRFALKGLETIRKSRPSLIYSQNDLARIAIGNFDDDFAKIAECD
                     WIIEVVVENLKIKRGLYAKIEALWRPGIVVSSNTSGISIAQMMEGRGKEFRSHFLVTH
                     FFNPVRYMKLLEMVAGKDTDPAIFAGIADFGERVLGKGIVYGKDTPNFVGNRVGVFAM
                     MHAMHAMIEDGLTIEEVDKILGPAMGRPKSAAFGTADLVGLDTLLHVSDNVYANLKED
                     PDRERFLPPPFVKEMAKRGLLGRKSGAGFFKMEGKGDTKRKYVLDYNELGYRPAEKVS
                     FPSLDAAKGEEDTGARIGKVISGDDKAAKYAWKVLSDTLLYSAKRIPEIAADVVNVDN
                     AMKWGFNWTLGPFETWDAIGLSDSVARMEAEGKAIPANVKNMLASGAGSFYRRREGAL
                     EFFDFASGGYLPVPLSPNIILLPSLAERKKEIRRNAGASLYDIGDGVLCLEFHTKMNT
                     IDADIAAMLMEGVDLAEREFAGLVIANHAEHFCAGANLMLVFLEAQNKQFDKIEAMVK
                     GFQDACMRLRYSERPVVAAPAGMALGGGTEMCLAADRVRASAETYMGLVEVGVGLLPA
                     GGGLKEMAIRHLEGIPEGV"
BASE COUNT          410 a          631 c          719 g          348 t
ORIGIN      
        1 ctcctcccgg ccggcgacgg agtagaaatc gcaatacccg cacttgcgga cgcagaacgg
       61 aacgtgaacg tagatccccc gcatggcaca attctctccc accttgacac gccgcgacaa
      121 gtgaatcatc attcagtctc acgttccgtc cgacaccgac ccgacaggag gtaggaaccg
      181 atgtttccga aaatccgcaa ggtggccgtc ctcggggccg gcgtgatggg ttccgggatc
      241 gcggcgcacc tggccaacgc cgggatctcc tgcctgatgc tcgacatcgt cccgccgggg
      301 ctctccgacg acgacaagaa gaagggggtg acggagaaga gtcccgcgtt ccgaaaccgc
      361 ttcgccctga aggggttgga gacgatccgg aagagccgtc cttccctgat ctattcgcag
      421 aatgacctgg cgcggatcgc gatcggaaat ttcgacgacg acttcgcgaa aatcgcggag
      481 tgcgactgga tcatcgaggt ggtggtcgag aacctgaaga tcaagcgggg gctctacgcg
      541 aagatcgagg cgctctggag gcccgggatc gtcgtctcct cgaacacctc cggaatctcg
      601 atcgcgcaga tgatggaagg gcgcgggaag gaattccgca gccacttcct cgtcacccac
      661 ttcttcaacc ccgtcaggta catgaagctg cttgagatgg tcgcggggaa agacaccgac
      721 cccgcgatct tcgccgggat cgccgacttc ggcgaacggg tcctcggaaa ggggatcgtc
      781 tacgggaagg acaccccgaa tttcgtcggg aaccgggtcg gggtcttcgc gatgatgcac
      841 gcgatgcacg cgatgatcga ggacgggttg accatcgaag aggtggacaa gatcctcggg
      901 cccgcgatgg ggcgccccaa atcggccgcc ttcggcaccg ccgatctagt gggcctcgac
      961 acgctcctcc acgtctccga caacgtgtac gcgaatctca aggaggatcc cgaccgcgag
     1021 cggttcctcc cgcccccttt cgtgaaggag atggcgaagc gcggcctgct gggccgcaag
     1081 tccggggccg gcttcttcaa gatggagggg aagggggaca cgaaaaggaa gtacgtcctc
     1141 gactacaacg aactggggta ccgcccggcg gagaaggttt ccttcccgtc cctcgacgcg
     1201 gcgaagggcg aggaggacac gggggcgcgg atcgggaaag tgatctccgg ggacgacaag
     1261 gcggcgaagt acgcctggaa ggtgctctcc gatacgctgc tgtactcggc gaagcggata
     1321 cccgagatcg ccgccgacgt cgtcaacgtc gacaacgcca tgaagtgggg attcaactgg
     1381 accctcggcc ccttcgagac gtgggacgcg atcgggctgt ccgactcggt ggccaggatg
     1441 gaggccgagg ggaaggcgat ccctgcgaac gtgaagaata tgctcgcctc cggcgccggg
     1501 tcgttctatc gacggaggga gggggcgctc gagttcttcg atttcgcctc cggagggtac
     1561 ctcccggttc ctctttcccc gaacatcatc ctcctcccgt cccttgcgga gcggaagaag
     1621 gagatccggc ggaacgcggg ggcgtcgctc tacgacatcg gcgacggggt gctgtgcctg
     1681 gagttccaca cgaagatgaa caccatcgac gccgacatcg ccgccatgct gatggagggc
     1741 gtcgatcttg cggagaggga gttcgcgggg ctggtcatcg ccaaccacgc ggagcatttc
     1801 tgcgccgggg cgaacctgat gctcgtcttc ctcgaggcgc agaacaagca gttcgacaag
     1861 atcgaagcga tggtcaaggg gttccaggac gcgtgcatgc ggctgcgata ttcggagagg
     1921 cctgtggttg cggcccccgc ggggatggcg ctgggcggcg gcaccgagat gtgccttgcc
     1981 gccgaccggg tccgcgcgtc ggccgagacg tacatgggac tggtcgaggt gggcgttggg
     2041 ctgctgcctg ccggcggggg attgaaggag atggcgatcc gccacctcga gggaatcccg
     2101 gagggggt
//
LOCUS       DATGYW010000612         1599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_258063, whole genome shotgun sequence.
ACCESSION   DATGYW010000612 DATGYW010000000
VERSION     DATGYW010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258063"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..732)
                     /locus_tag="VK429_08575"
     CDS             complement(<1..732)
                     /locus_tag="VK429_08575"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HLN91895.1"
                     /translation="MTRNPLKRVLVVDDEPMIVSLLSTILREKGWDVTEARSGTEGID
                     QLDRARFDVILTDLVMPGDSGIDLLRAAKEIHPDVEVILMTGYATAETAIEAMRNGAF
                     HYIMKPLKTEEVVNLVEKAYSQRQLQRENQFLKSEIRAAHHVQSVVGDSEPILRLIAT
                     LQGIAGVDDPVLLAGERGTGRGFYARIVHFHSRRSGELCVPVYCAGVPEETLLSELFG
                     GPCAIEDQTSVPYSGKIELANHGTLY"
     gene            complement(734..1021)
                     /locus_tag="VK429_08580"
     CDS             complement(734..1021)
                     /locus_tag="VK429_08580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91896.1"
                     /translation="MERSHPHGQRRILAGSGVGRALPALLPALFLLFFLLFALPPSAA
                     TDDGKVATYEDRATAEKMSRSRYRGLEVASLVVILVAGGAAILWAVRRRKP"
     gene            complement(1168..1521)
                     /locus_tag="VK429_08585"
     CDS             complement(1168..1521)
                     /locus_tag="VK429_08585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91897.1"
                     /translation="MRGPHFRFTIKSVVAILCAACFLAMNLGSVSRAVADDAWEAWPK
                     KTAEPVIELKPATDANEAAKAGDTAGKKTATGSSYKTIGWIALGIAAVIGIAIAAGGG
                     GGGDGGSTVMNPGHQ"
BASE COUNT          274 a          511 c          517 g          297 t
ORIGIN      
        1 gtagagcgtg ccgtggttcg caagctcgat ctttcccgaa taggggacgg acgtctgatc
       61 ctcgatggcg cacgggcccc cgaacagttc cgagaggagc gtctcctccg gaacgcccgc
      121 gcagtagacg gggacgcaca actccccgga ccggcggctg tggaagtgga cgatgcgtgc
      181 gtagaaaccg cgcccggtgc cgcgctcccc cgcgagcagc accgggtcgt ccacgcccgc
      241 gatcccctgg agggtggcga tcaggcgcag gatgggctcg ctgtccccga cgacggactg
      301 gacatggtgg gcggcgcgga tttccgattt caggaactgg ttctcccgct gcagctgccg
      361 ttgggagtac gccttctcga cgagattcac cacctcctcg gttttcagcg gtttcatgat
      421 gtagtggaag gcgccgttgc gcatcgcctc gatggcggtt tccgcggtgg cgtaccccgt
      481 catgaggatc acctcgacat cggggtggat ctccttggcg gcgcgcagca ggtcgatgcc
      541 gctgtccccg ggcatgacga gatcggtgag gatcacgtcg aaccgggccc ggtccagctg
      601 gtcgatccct tccgttccgg accgcgcctc ggtgacgtcc catcccttct cccggaggat
      661 cgtggagagg agggagacga tcatcggctc gtcgtcgacg accaggaccc gcttcagggg
      721 attccgggtc atgtcacggt ttcctcctgc ggaccgccca gaggatggca gccccccccg
      781 cgacaagaat gacgaccagg gacgccacct cgaggccccg gtagcgcgac cggctcatct
      841 tctccgcggt cgcccggtcc tcgtatgtcg ccaccttgcc gtcgtccgtc gcggcggacg
      901 gtggcagggc aaagagcagg aaaaagagga ggaagagggc gggaaggaga gcggggagag
      961 ccctccccac ccccgaaccg gcgaggatcc gacgctggcc gtgcgggtgc gaacgttcca
     1021 tcggttggtt tataccacgt tctttaaaag gttcatagac ttcaatgatt tagatgcctt
     1081 gccggatttt tgaaaagtgg tgcaaagaga acgccaaggg caagcggaaa cggtatgcgg
     1141 atcaaccgat cggcgaattg accgcgctca ttggtggcct gggttcatca ccgtactgcc
     1201 tccgtctccg cctccacctc cgccggcggc gatcgcgatc ccgatgaccg cggcaatccc
     1261 gagggcgatc cagccgatcg ttttgtagga gcttcccgtc gccgttttct tccccgcggt
     1321 atccccggcc ttggccgcct cgttcgcgtc cgtggccggt ttcagctcta tcaccggctc
     1381 ggccgtcttt ttcggccacg cttcccaggc gtcgtcagcg accgcgcggg aaacggaccc
     1441 gaggttcatg gcgagaaagc aggcggcgca aaggatcgcg acaacggatt tgatcgtaaa
     1501 ccggaaatgg ggtccgcgca tggtaagccc ccctttggaa acgtcatctc atcaaagccc
     1561 cggcgggatt cccgcatggg cctgtggtta cgtttgtcc
//
LOCUS       DATGYW010000613         1525 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_258089, whole genome shotgun sequence.
ACCESSION   DATGYW010000613 DATGYW010000000
VERSION     DATGYW010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258089"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..182
                     /locus_tag="VK429_08590"
     CDS             <1..182
                     /locus_tag="VK429_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006431888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLN91898.1"
                     /translation="GLGAFGGFAIPPLMGIIVQAQGIEGYANGFVVFFCLAVISLLLV
                     GILKRKRASVLPSPI"
     gene            208..1002
                     /locus_tag="VK429_08595"
     CDS             208..1002
                     /locus_tag="VK429_08595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004512300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HLN91899.1"
                     /translation="MRERPGYFRLLLILVIFFSAPAWADSGKELFEKECSGCHTIGGG
                     DSGAPDLKGITGKRPADWLERVIVEPDKLTADKDPVQLGLVKQYGGEMPNLGMSRKDA
                     KKILAYLQDASQVPSSSDTAQPAEPGSKPVETVVTPELVAQGRALFTGGKPFANGGAP
                     CTGCHGFGYAGVPGGNLAVDLGMRIEGISEQVFRGKLKSLNFPIMRKMYADKPLTDGE
                     ITALVVFAKDAVARKVPPGGTYYPVRGLAIFVCLIAGFTLYKRRVR"
     gene            1002..>1525
                     /locus_tag="VK429_08600"
     CDS             1002..>1525
                     /locus_tag="VK429_08600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004512301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HLN91900.1"
                     /translation="MSSGRIKDDRTPADRGWEEYYRNRWQYDKVVRSTHGVNCTGGCS
                     WMVHVKDGIVGWELQANDYPQFNDSIPNHEPRGCTRGISYSWYLYSPLRVKHPYMRGA
                     LIDLWREARQRHADPVDAWQSIVENPESRKAYTGKRGMGGFRRADWDEVVELIAASTI
                     YTAKKYGPDRVIGFT"
BASE COUNT          309 a          432 c          508 g          276 t
ORIGIN      
        1 gagggctcgg cgcgttcggg gggttcgcca tccccccgct catggggatc atcgtgcagg
       61 cgcaggggat cgaaggctac gcgaacgggt tcgtggtctt cttctgcctg gcggtgatct
      121 cccttcttct cgtcgggatc ctcaaacgga aacgcgccag cgttctcccg tcaccaatat
      181 gatggtaatc ctctggagga taaatccatg agagagcgtc cgggttattt ccgcctcctg
      241 ctcatcctgg tgattttctt ctctgccccg gcgtgggcgg actcgggcaa ggagttattt
      301 gaaaaagagt gctcgggttg ccacacgatc ggcggcggcg attcgggtgc ccccgacctg
      361 aaaggcataa cggggaagag gccagccgac tggctcgaga gagtcatcgt cgagccggac
      421 aaactgaccg ccgacaagga cccggtccag ttggggctgg tgaaacagta tggcggcgag
      481 atgccgaacc tcgggatgag ccggaaggat gcgaaaaaga ttctggccta tctgcaggat
      541 gcatcccagg ttccatcgtc ctcggatacc gcccagcctg ccgaaccggg atcgaagccc
      601 gtggagaccg tggtaactcc cgagcttgtc gcgcagggga gggctctctt cactggagga
      661 aagcccttcg cgaatggggg tgctccctgc acgggatgcc acggtttcgg gtatgcgggg
      721 gtgccgggcg gaaacctggc cgtcgatctg ggcatgcgca tcgaggggat aagcgagcag
      781 gtattccggg ggaagttgaa gagcctcaat ttcccgatca tgagaaagat gtacgcggac
      841 aagccgctga ccgatgggga aatcaccgcg ctggtcgtct tcgccaagga tgccgttgcg
      901 cggaaagtcc ctcccggcgg gacgtattat ccggtgaggg ggctcgccat attcgtctgc
      961 ctgattgcgg gctttacgct gtacaaaagg agggtccggt aatgtcgagc gggcggatca
     1021 aggacgaccg aaccccggcg gatcggggat gggaggagta ttatcggaac cgctggcagt
     1081 acgacaaggt ggtgcggagc acccacggcg tcaattgcac cggcggatgt agctggatgg
     1141 tgcacgtcaa ggacggaatc gtcggctggg aactccaggc gaacgactac ccccagttca
     1201 acgacagcat cccaaaccac gaaccacgcg gttgcacgcg ggggatcagt tactcctggt
     1261 acctctacag cccgctgcgg gtcaaacacc cgtatatgcg tggcgctctc atcgacctct
     1321 ggcgggaggc ccggcaacgc catgccgacc cggtggatgc gtggcagagc atcgtggaga
     1381 accccgaatc gcggaaagcc tacaccggca aacgcggcat gggtggtttc cggcgggcag
     1441 actgggacga ggtggttgaa ctgatcgccg cctccacgat ctataccgcg aagaaatacg
     1501 gacccgaccg ggtcatcggc ttcac
//
LOCUS       DATGYW010000614         1584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_258167, whole genome shotgun sequence.
ACCESSION   DATGYW010000614 DATGYW010000000
VERSION     DATGYW010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258167"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VK429_08605"
     CDS             <1..432
                     /locus_tag="VK429_08605"
                     /inference="COORDINATES: protein motif:HMM:NF013962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HLN91901.1"
                     /translation="SSLSYGQGAGMLPTASAVVSDVIEIARNLRRGCAGRMPPGGYFL
                     ADPSARADLAPFDQVHCEYYLKIRVVDKPGVLSRIAGVLGSHAISIASVLQKGQGQTA
                     VPIFIVTHRAKESDMRSALAEVDRLPDVLDRTRMIRIENNL"
     gene            454..1509
                     /gene="thrC"
                     /locus_tag="VK429_08610"
     CDS             454..1509
                     /gene="thrC"
                     /locus_tag="VK429_08610"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014809553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HLN91902.1"
                     /translation="MHWQGIIRHYGRFFTFVPEEAIVTLLEGNTPLVPAPALARRIAP
                     GTELYLKYEGLNPTGSFKDRGMTMAVSKAKADGSDSVICASTGNTSASAAAYAARAGM
                     KAFVLIPEGKIALGKLSQAMIHGAQVLQVLGNFDDALSLVKEVSSKYPVTLVNSLNPY
                     RIEGQKSAAFEIVDALGDAPDYHILPVGNAGNITAYWAGYKEYRAAGKSNRLPAMLGW
                     QAEGAAPIVRGAPVAKPETVATAIRIGNPASWKQAEAARDESGGLIRMVSDAEILEAY
                     KMVAETEGIFCEPASAASIAGVIKLGAEGFFQAGQRLVCTLTGHGLKDPDNAIAQSVA
                     PVTIPPVLGDVLKILGF"
BASE COUNT          289 a          517 c          527 g          251 t
ORIGIN      
        1 tcctccctgt cgtacggaca gggagcgggg atgctcccga cggcgtccgc ggtggtgagc
       61 gacgtgatcg agatcgcccg gaaccttcgg aggggatgcg cgggccggat gccgcccggg
      121 gggtacttcc tcgccgatcc gtcggcccgg gcggacctcg cgccgttcga ccaggtccac
      181 tgcgagtact accttaaaat ccgggtggtg gacaagcccg gcgttctctc gagaatcgca
      241 ggagtgctgg ggagccacgc gatcagtatc gcgtccgttc tccagaaggg acaggggcag
      301 accgcggttc ccatcttcat cgtcacccac cgggcgaagg agagcgacat gcggtcggcg
      361 ctcgccgagg tggaccgtct ccccgatgtc ctcgaccgga cacgaatgat ccggatcgaa
      421 aacaacctct gagataaaag gacccgaggc gatatgcact ggcaagggat catccgccat
      481 tacgggcggt tcttcacctt cgttcccgag gaggccatcg tcacgctgct ggaggggaac
      541 acccccctcg tcccggcccc cgcgctggcc aggcggatcg ctcccggaac cgagctgtac
      601 ctcaagtacg aggggctgaa cccgaccggc tccttcaagg accgcgggat gacgatggcc
      661 gtatccaagg cgaaggcgga cggttccgat tcggtcatct gcgcttccac cggaaacacc
      721 tccgcctccg cggccgccta cgccgcccgt gcaggcatga aggcgttcgt cctcattcct
      781 gagggaaaaa tcgcgttggg gaagctttcc caggcgatga tccacggggc gcaggtgctc
      841 caggttctgg gcaacttcga cgacgccctc tcgctcgtca aggaagtctc gtcgaagtac
      901 cccgtgacgc tggtgaactc gctgaacccg taccggatcg aagggcagaa gtcggccgcg
      961 ttcgagatcg tcgacgccct cggggacgcg cccgactacc acattctccc ggtggggaac
     1021 gcggggaaca tcaccgcgta ctgggccggg tacaaggaat accgggccgc cgggaagtcg
     1081 aatcgccttc ccgcgatgct cggctggcag gcggaagggg ccgccccgat cgtccgcgga
     1141 gcccctgtcg cgaagcccga gacggtcgcc accgccatcc gaatcggcaa tcccgcctcc
     1201 tggaaacagg cggaggccgc gcgcgacgag tccggggggc tcatccggat ggtgagcgac
     1261 gcggagatcc tcgaggcgta caagatggtt gccgagacgg aagggatctt ctgcgaaccc
     1321 gcgtccgccg cctcgatcgc cggcgtgata aaattggggg ccgaaggatt tttccaggcg
     1381 gggcagcgac tcgtctgcac gctgaccggg cacggcctga aggacccgga caacgccatc
     1441 gcgcagtcgg tggcccccgt gacgatcccc ccggttctcg gggacgttct caagatcctc
     1501 ggtttctgaa ggagacgacg atgggtggga aatacatcat cctgatcggc gacggcatgg
     1561 ccgactggcc gatcccggcg atcg
//
LOCUS       DATGYW010000615         1832 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_92263, whole genome shotgun sequence.
ACCESSION   DATGYW010000615 DATGYW010000000
VERSION     DATGYW010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92263"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VK429_08615"
     CDS             complement(<1..262)
                     /locus_tag="VK429_08615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HLN91903.1"
                     /translation="MMPRILRNVPCRLGAWNAACLLLGTALTAIHPGTVQAIGGPQPI
                     TVTVEGEVRRPGSYSLPHDATLSTLIVAAGGYNDNADLAGGTL"
     gene            386..1747
                     /locus_tag="VK429_08620"
     CDS             386..1747
                     /locus_tag="VK429_08620"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014855047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HLN91904.1"
                     /translation="MNVAIVGTGYVGLVTGVCLAERGNSVHCVDTNPVVVEKLNAGQV
                     TIYEPGLDDIFLRNLKKGRIAFSGDLEKAVLPAEIIFLCLPTPPGDDGSADLKYILQV
                     ADDLGKIFARNPNAGYKVVVDKSTVPVGTSDKVLAAIRKNVGPSFAFSVVSNPEFLRE
                     GFAVEDFLRPERVVIGSSEERAIVALKDLYEPFLQTGSKVIVMDEKSAEVTKYAANAF
                     LALKISYMNDLANFCDAVGADIDRIREGIGSDSRIGHKFLHPGLGYGGSCLPKDVKAL
                     LKSASEAGTPLSVLQAVEDINQDQRKRFFRRMERHFGGKLEGLRFAVWGIAFKPNTDD
                     TREAPVFYLIDGMLNAKASVVVFDPEAMGGARARYGDRIEYAESSYGALQGADVLVIA
                     TEWFEFRKPDFGLMKTLMRQPVIFDGRNIYDPRKMRERGFLYHSIGRKAYESHGTPEP
                     GRS"
BASE COUNT          343 a          521 c          648 g          320 t
ORIGIN      
        1 acagggtgcc cccggcaagg tccgcgttgt cgttatatcc gccggcggcg acgatcaggg
       61 tggagagggt cgcgtcgtgc gggagactgt agctgccggg gcgccggacc tccccctcca
      121 cggtgaccgt gatcggctgc ggtcccccga tcgcttggac ggtccccgga tgaatcgctg
      181 tcaaggcggt tcccagaagg agacaggcgg cgttccacgc gcccaggcgg caggggacgt
      241 ttcggaggat gcggggcatc atcgaagtat accgcggtgc ccgcccgttt cgtttcccga
      301 ctacccgcgc gctgaagttt aaggtattct cagccgatca gcatacttgg aaccatcgga
      361 cacttgaaat gacggagggt tgcggatgaa cgtcgcgatc gtaggaacgg gatacgtggg
      421 gctggttacc ggggtgtgcc tcgccgagcg ggggaactcc gtgcactgcg tcgacacgaa
      481 cccggtggtg gtcgagaaac tgaacgccgg acaggtgacg atctacgagc ccgggctcga
      541 cgacatcttc ctgcgcaacc tgaagaaggg gcggatcgcg ttctcggggg atctcgagaa
      601 ggcggtcctc cctgccgaga tcatcttcct ctgcctccca acgccccccg gtgacgacgg
      661 ctccgcggac ctgaagtaca tcctccaggt ggcggacgac ctcgggaaga tcttcgcgcg
      721 caacccgaac gcggggtaca aggtggtggt cgataaatcc accgtgccgg tggggacgag
      781 cgacaaggtg ctggcggcga tccggaagaa cgtggggccg tccttcgcct tcagcgtcgt
      841 gtcgaatccg gagttcctgc gcgagggatt cgcggtagag gatttccttc ggccggagcg
      901 cgtggtgatc ggatcgagcg aggagcgggc gatcgtggcc ctcaaggacc tctacgagcc
      961 attcctgcag accggcagca aggtcatcgt gatggacgaa aagagcgccg aggtgaccaa
     1021 gtacgccgcg aacgccttcc ttgcactgaa gatttcctac atgaacgacc tggcgaactt
     1081 ctgcgacgcc gtgggggccg atatcgacag gatccgcgag gggatcgggt cggactcgcg
     1141 gatcgggcac aagtttctcc atccggggct ggggtacggc ggctcgtgtc tcccgaaaga
     1201 cgtgaaggcg ctgctgaaaa gcgcgtccga agcggggacg ccgctctcgg tcctgcaggc
     1261 ggtcgaggat atcaaccagg accagcggaa gcgtttcttc aggaggatgg agcggcattt
     1321 cggcggcaag ctcgaagggc tgaggttcgc cgtctggggg atcgcgttca agccgaacac
     1381 ggacgatacg cgggaggcgc cggtcttcta tctgatcgac gggatgctga acgccaaggc
     1441 gtcggtggtg gtcttcgacc cggaggcgat ggggggcgcg cgggcacggt acggggacag
     1501 aatcgagtac gcggagtcgt cgtacggcgc gttgcagggg gcggatgtcc tggtgatcgc
     1561 cacggagtgg ttcgagttcc gcaagcccga tttcgggctg atgaagaccc tgatgcggca
     1621 gccggtcatc ttcgacgggc gcaacatcta cgacccgcgg aagatgcggg agcggggttt
     1681 cctctaccac tcgatcggcc gcaaggccta cgagagccac ggaaccccag aaccgggacg
     1741 ttcctagaac tcccccagaa gtgggacaga gacgttggtc tttcgatggt cgcgatgtga
     1801 ggcaatacat ggttttgatg agtgtcccgg at
//
LOCUS       DATGYW010000616         2300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_426938, whole genome shotgun sequence.
ACCESSION   DATGYW010000616 DATGYW010000000
VERSION     DATGYW010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_426938"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            104..415
                     /locus_tag="VK429_08625"
     CDS             104..415
                     /locus_tag="VK429_08625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013907843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HLN91905.1"
                     /translation="MTDFKDLMRQAQEVRDRFQRLQEELGGRTVEGSAGGGMVVAVMN
                     GRQELLSVRIEKEVVSPDDVGMLQDLVRAAVNAALARSREVAAAEMGKITGGMLPPGI
                     L"
     gene            412..1014
                     /gene="recR"
                     /locus_tag="VK429_08630"
     CDS             412..1014
                     /gene="recR"
                     /locus_tag="VK429_08630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011699636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HLN91906.1"
                     /translation="MTAVYPKPLRRLVALLSRLPGIGEKTATRLSMFLLSMPPEFVRE
                     LGAAIAGIPESVTKCSKCFNIADEDPCAFCADPARRDDLICVVEGPTDIVPIEKSGEF
                     KGRYHVLGGAISPIDGVMPDDLRVRELLERTARGGVSEVVLATNLTAEGEATASYLAE
                     VLKGRNVRVSRIAYGLPMGADLEYADEISVGRAMKGRREL"
     gene            1061..2080
                     /locus_tag="VK429_08635"
     CDS             1061..2080
                     /locus_tag="VK429_08635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011917753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HLN91907.1"
                     /translation="MTKSGKAVKLPVKNDLGFFEIRMESIGGLGANVAGKILTEAAII
                     GMGMNGAGFASYGSEKKGTPIKSFVRICEGDQAVRINSPVEEPHVLAIFHEALAKSVP
                     VTAGAVPGKTVVIVNTRKTPAQARDFLKLEGGKVGVVDAMEIAMATGSRVNMVMMGAI
                     MKAAGFFEWKAVEEAVLAQFGKKYASLMKANMGALKRGFDEVKFEEFRKDGKSPAQPF
                     RREEPKLGYETAPIGGTIYSVGNMRFKDLSTSRTGAIPLFILDKCTRCGECDITCPDY
                     CFVWEKGKDPKTGKDGMVLHGIDYQYCKGCLRCTYICKFGALVPAKEAEQDMDKITVK
                     HKFLK"
     gene            2112..>2300
                     /locus_tag="VK429_08640"
     CDS             2112..>2300
                     /locus_tag="VK429_08640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018886425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91908.1"
                     /translation="MAQTAKKTSERPAQVMVVQSGNEIAATAAKQINYHVMGYYPITP
                     STEVAETLDAMKAEGEHTI"
BASE COUNT          463 a          676 c          827 g          334 t
ORIGIN      
        1 tcaaggtgca gcccgcgccc ccggtcgagg tcccgcggaa cgaagtcgcg gcggacgagg
       61 acgcggggga gccggagttc ccggagccgg acgaggagag cggatgacgg acttcaagga
      121 cctgatgcgg caggcgcagg aggtgcgcga ccggttccag cgtctccagg aggagctggg
      181 ggggcgcacg gtcgaggggt cggcgggcgg cgggatggtc gtggccgtca tgaacggccg
      241 ccaggagctc ctctccgtgc gcatcgagaa ggaggtggtc tcccccgacg acgtggggat
      301 gctgcaggac ctggtccgcg cggcggtgaa cgccgccctc gcgcgctccc gggaggtggc
      361 tgccgccgag atggggaaga tcacgggcgg gatgcttccg ccggggatcc tgtgaccgcc
      421 gtctatccga aaccgctgcg ccgcctcgtc gccctcctgt cccgcctccc cgggatcggg
      481 gagaagacgg ccacgcgcct gtcgatgttc ctcctttcga tgccgcccga gttcgtccgc
      541 gagctggggg cggccattgc cgggattccg gagtccgtga caaaatgttc caaatgtttt
      601 aacattgccg acgaggaccc gtgtgctttc tgcgcggacc ccgcgcgccg ggatgacctg
      661 atctgcgtcg tggaaggtcc caccgatata gtcccgatcg aaaaaagcgg ggagttcaag
      721 gggaggtacc acgtcctcgg cggggcgatc tcgccgatcg acggcgtcat gcccgacgac
      781 ctccgggtgc gggagctcct ggagcggacg gcccgcggcg gcgtatccga ggtggtcctt
      841 gcgacgaacc tcacggcgga gggagaggcc acagcgtcct acctcgccga ggtcctcaaa
      901 ggcaggaacg tccgcgtgag tcggatcgcc tacgggctcc cgatgggagc ggacctcgag
      961 tacgccgacg agatctccgt gggcagggcg atgaaggggc ggcgggaatt gtgaacaaat
     1021 cgatacgcaa cggaacatac caacgagagg ggcagggaag atgaccaaga gcggcaaggc
     1081 ggtgaaactg ccggtgaaga acgacctcgg attcttcgag atccggatgg agagcatcgg
     1141 cgggttgggc gcgaacgtgg ccgggaagat cctcaccgag gcggcgatca tcgggatggg
     1201 gatgaacggc gccgggttcg cctcgtacgg ttcggagaag aaggggacgc cgatcaagtc
     1261 gttcgtgcgg atctgcgagg gcgaccaggc ggtccggatc aacagcccgg tggaggagcc
     1321 gcacgtcctg gcgatcttcc acgaggcgct tgcgaaatcg gtccccgtga ccgcgggcgc
     1381 ggttcccggg aagacggtcg tgatcgtgaa cacccgcaag accccggcgc aggcgaggga
     1441 cttccttaag ctcgagggcg ggaaggtcgg cgtcgtcgac gcgatggaga tcgccatggc
     1501 gaccggctcc agggtgaaca tggtcatgat gggcgcgatc atgaaggccg ccggcttctt
     1561 cgaatggaag gcggtcgagg aggcggtcct ggcgcagttc ggcaagaagt acgcctccct
     1621 gatgaaggcg aacatgggag cgttgaagcg cgggttcgac gaggtcaagt tcgaggagtt
     1681 ccggaaggac gggaaatccc ccgcccagcc gttccggcgc gaggagccga aactcggcta
     1741 tgagacggcc ccgatcggcg gaacgatcta ctcggtcggg aacatgcgct tcaaggacct
     1801 ctccaccagc cgcacgggag cgatccccct tttcatcctc gacaagtgca cccggtgcgg
     1861 cgagtgcgac atcacctgcc ccgactactg cttcgtgtgg gagaagggga aagaccccaa
     1921 gacgggcaag gacgggatgg tacttcacgg gatcgactac cagtactgca aggggtgtct
     1981 ccggtgcacg tacatctgca agttcggcgc actggtcccc gccaaggaag cggagcagga
     2041 catggacaag atcaccgtaa agcacaagtt cctgaaataa cgattttctc gaaaccataa
     2101 ggagaaagcg aatggcgcag acggcgaaga agacgagcga acgccccgcc caggtgatgg
     2161 tcgtgcagag cggcaacgag atcgcggcga cggcggcaaa gcagatcaac taccacgtca
     2221 tggggtacta ccccatcacg ccctcgacgg aggtcgccga gaccctcgac gcgatgaaag
     2281 cagagggaga gcacaccatc
//
LOCUS       DATGYW010000617         2098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_92561, whole genome shotgun sequence.
ACCESSION   DATGYW010000617 DATGYW010000000
VERSION     DATGYW010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92561"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /locus_tag="VK429_08645"
     CDS             complement(<1..737)
                     /locus_tag="VK429_08645"
                     /inference="COORDINATES: protein motif:HMM:NF012449.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HLN91909.1"
                     /translation="MPSDRIEIPPPTEWPPDPLQKLIDSLESIRSEMADLESVLSERG
                     RDIHPSQLPSAANLMHYVALRRHDVRQIQEQLAILGLSSLGRAESHVLGALDAVLRIL
                     YRMADGDREPPPGRAGSPVRFTEGKALLDRHTEALLGPKPPYRGVRIMVTMPGEAADD
                     YLVVRDVLAAGMDCMRINCAHDDEERWGKMIENLRRAEREVGRPCRVLMDLSGPKLRT
                     GPIQQAQGVIKWRPRRDDLGNVTAPAR"
     gene            928..>2098
                     /locus_tag="VK429_08650"
     CDS             928..>2098
                     /locus_tag="VK429_08650"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HLN91910.1"
                     /translation="MARIAAIDMGSNAIRFYVVETAGDSPYRVLENLREPIRLGGDVF
                     LKGTIREENIRKAEAAFRRFRQLLKAHGVQTVRAVATCATREASNADQLLSRLERASG
                     IRVEVIDGDEEARLIALAVGKKIPLNRKSALIVDLGGGSVEITFVENGRITLADSHNF
                     GAVRLLDMLSSAEEDLRSAGQLLGEYMDLVGRKLSRRGNGKKAALFIATGGNIEAIAS
                     IPDVRAEPHPDYPDTVRLKAGNLRRLMEELSGMSLKARMERFGLREDRADVILPACFV
                     YHRIAELNGSEEILVPRVSLKDGVIQEILEQAKGAEHLLDLREQVGVSCREMVARYKV
                     DPRHAEKVAELALSLFDQTEPLHGLGKQERIYLEAAALLHDVGYFISMQKHHKHSH"
BASE COUNT          356 a          703 c          716 g          323 t
ORIGIN      
        1 atgcgcgccg gcgcggtcac gttcccgaga tcgtcgcgcc gcggccgcca tttgatgacc
       61 ccttgcgcct gctggatggg gccggtccgc agcttggggc cggacaggtc catcagcacg
      121 cggcaggggc gcccgacctc gcgctccgcc cggcggaggt tctcgatcat cttcccccat
      181 cgctcctcgt cgtcgtgtgc gcaattgatc cgcatgcagt ccattccggc cgccaggacg
      241 tcccgcacga cgaggtagtc gtccgcggct tctccgggca tggtgaccat gatccgcacg
      301 ccgcgatagg ggggcttcgg cccgagaagg gcctccgtgt gccgatccag gagcgccttc
      361 ccctccgtga accggaccgg cgagcccgcc ctcccggggg gaggctcgcg gtcgccgtcc
      421 gccatccggt agaggatccg gagcacggcg tcgagtgcgc cgaggacgtg cgactccgcc
      481 cggcccagcg aggagaggcc gaggatcgcc agctgctcct ggatctggcg gacgtcgtgc
      541 cgccgcaggg cgacgtaatg catcaggttc gcggcgctgg ggagttgcga cgggtggatg
      601 tcccgccccc gttcggagag aaccgactcc aggtcggcca tctcggaccg gatggactcc
      661 agggaatcga tcagcttctg caacggatcg gggggccatt ccgtgggggg agggatttcg
      721 attctatccg agggcatcgg cccggcacct tccttcggga attcccgcca cttccgataa
      781 ggtataccat gcccggcaat atgttgatat tttagggcaa tcttccgcaa cgctcccgga
      841 cgaaatctcg cttccaaggc gatgcgtggg cgggagcgac cgtttcctta tacaatacac
      901 aatagtcccg gaggagggga atcaggaatg gcccgcatcg ccgccatcga catgggatcc
      961 aacgcgatcc ggttctacgt ggtggagacc gccggggact ccccgtaccg ggtcctggaa
     1021 aacctccggg agccgatccg gctggggggc gatgtttttc tcaaggggac catccgggag
     1081 gagaacatcc ggaaggccga ggccgccttc cggcggttcc gccagttgct gaaggcccac
     1141 ggggtgcaga ccgtccgggc cgtcgccacc tgcgccaccc gggaggcctc caacgccgac
     1201 cagctgctca gccgcctcga gcgcgcatcc ggcatccggg tcgaggtgat cgacggcgac
     1261 gaggaggcgc ggctgatcgc actcgccgtc gggaagaaga tccccctgaa ccggaagagc
     1321 gcactcatcg tcgacctcgg gggcggctcg gtggagatca ccttcgtcga gaacggccgg
     1381 atcaccctgg ccgactccca caacttcggc gccgtccggc tcctggacat gctctcctcc
     1441 gcggaggagg acctgcgaag cgccggccag ctgctcggcg aatacatgga cctggtgggc
     1501 aggaagctgt cccggcgggg aaacgggaag aaggcggccc tgttcatcgc cacgggcggg
     1561 aacatcgagg cgatcgcctc catccccgac gtgcgcgccg agccgcatcc cgactacccc
     1621 gacaccgtgc gcctcaaggc cgggaacctc cggcggctga tggaggagct ctccgggatg
     1681 tcgctgaagg cccggatgga gcggttcggg ctgcgggagg accgggccga cgtcatcctc
     1741 cccgcctgct tcgtgtacca ccggatcgcg gagctgaacg gctccgagga gatcctcgtc
     1801 ccccgggtga gcctgaagga cggcgtgatc caggagatcc tcgagcaggc caagggggcc
     1861 gagcacctcc tggacctccg tgagcaggtg ggcgtgtcgt gccgcgagat ggtcgcgcgc
     1921 tacaaggtgg acccgagaca cgcggagaag gtcgccgaac tcgccttgag cctcttcgac
     1981 cagacggaac cgctccacgg gctggggaag caggagcgga tctacctgga agcggcagcg
     2041 ctcctgcacg acgtcgggta cttcatcagc atgcagaagc accacaagca cagccact
//
LOCUS       DATGYW010000618         2185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_521558, whole genome shotgun sequence.
ACCESSION   DATGYW010000618 DATGYW010000000
VERSION     DATGYW010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2185)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2185
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_521558"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VK429_08655"
     CDS             complement(<1..268)
                     /locus_tag="VK429_08655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HLN91911.1"
                     /translation="MKGVCTPLLNCYACPSALLSCPIGTLQHFAAAGNVSWYAVGTLS
                     VVGASVGRMTCGTLCPFGALQDLLYKFRGWKASLPHWTRYLRYAV"
     gene            complement(529..1368)
                     /gene="ccsB"
                     /locus_tag="VK429_08660"
     CDS             complement(529..1368)
                     /gene="ccsB"
                     /locus_tag="VK429_08660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011736445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HLN91912.1"
                     /translation="MSNVILFNLTTVLFGVASALCLGALYAKNETIAGVGTWVCVLAA
                     VVSTAALGVRWYESYQMGIGRIPVTNLYESLVFFAWSVNLFYLIVERKYRNRTFGAFV
                     MPIAFFTMVFAVYNDSSIQPLVPALQSYWLHAHVITCFIGYAAFAVSAGVALMYLLKA
                     RQEEAKISQGIVGLLPACKMLDDLVYRAIIWGFPFLTAGIITGAAWANYAWGTYWSWD
                     PKETWSLIVWLVYAAFLHARVTRGWHGKRAAILSLVGFLATIMCYLGVNLVLSGLHSY
                     GGS"
     gene            complement(1365..>2185)
                     /locus_tag="VK429_08665"
     CDS             complement(1365..>2185)
                     /locus_tag="VK429_08665"
                     /inference="COORDINATES: protein motif:HMM:NF016995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HLN91913.1"
                     /translation="IGAIVGNVAGFKGYVNIPEGEAITQVPVRGGLQIQNLGFTVRCN
                     SFSLETYPSGQPKAYKSDLSVIDGGREVVRKTIVVNDPLQYKGIWFYQSSYGQAGGAT
                     AQVAVTRKDGTPVRMLSLTANEPVPIDGYGIVRGVNYDQNFQGNGPALQVVVEKPGQP
                     ATAFWLVQRRPDLDRQRADSLVFSFRGLSSKMFTGLQVAKDPGVNIVWLGCALMVIGL
                     IMAFFLSHQRVWVRLAQGTDGRVEVVLAGSASRNRLAFEKRFEKLQTGVKAVGQ"
BASE COUNT          432 a          719 c          704 g          330 t
ORIGIN      
        1 ggacggcata gcggagatac cgtgtccaat gcggcaggga cgccttccac ccccggaact
       61 tgtaaaggag gtcctggagg gcgccgaagg ggcacagggt cccacacgtc attcgcccca
      121 cggacgcgcc gacgaccgaa agggtcccga ccgcgtacca cgagacgttc ccggccgccg
      181 cgaaatgctg cagcgtaccg atgggacagg aaagcagggc ggaggggcat gcgtagcagt
      241 tcagcaacgg ggtgcagacg cccttcatgg acccctggta aagcgacgcg gaaaggaacc
      301 cgggaaacca tgcgttggga aggacggccc ccagcccctg gaagatccgc cgtgtaagaa
      361 ttctcaaggg gtcacccgac cccgatgcac gacagtcaaa gcagcgcgcc gttgatcagc
      421 acctccgcga tctccttccg gaagatgccg cacaacagca ccgagacggc caccacggcc
      481 gtgaccagaa aggcgaccgg acgtcccttc atcgccccag ggccgacatc agctaccgcc
      541 gtaagagtgc aggccggaga gcaccaggtt gacgccgagg tagcacatga tcgtcgccag
      601 gaaccccacg agggagagga tggcggcgcg ctttccgtgc cacccccggg ttacccgcgc
      661 gtggaggaac gccgcgtaga cgagccacac gatcagggac caggtttcct tcgggtccca
      721 cgaccagtac gttccccacg cgtaattcgc ccacgccgcg ccggtgatga tcccggcggt
      781 caggaacggg aacccccaga tgatcgcccg gtagaccagg tcgtcgagca tcttgcacgc
      841 cggcagaagg cccacgatcc cctgagaaat cttcgcctct tcctgccggg ccttcagcag
      901 gtacatgaga gccacgccgg cggagacggc gaacgccgcg tacccgatga agcaggtgat
      961 gacgtgggcg tgcagccagt acgactgcag ggccggcacc agcggctgga tgctgctgtc
     1021 gttatagacg gcgaagacca tcgtgaagaa ggcgatcggc atcacgaagg cgccgaaggt
     1081 ccggttgcgg tacttcctct ccacgatcag atagaacagg ttcaccgacc aggcgaagaa
     1141 gacgagcgac tcgtagaggt tcgtcacggg gatgcgaccg atccccatct ggtacgattc
     1201 gtaccagcgc accccgagcg ccgcggtgga gacgacggcc gcgaggacgc agacccaggt
     1261 gcccacgcct gcgatcgttt cgttcttcgc gtagagagcg ccgaggcaca gggcggacgc
     1321 cacgccgaac aggaccgtcg tgaggttgaa caggatgacg ttgctcattg gcccaccgcc
     1381 tttacgccgg tctgtagttt ctcgaatctc ttctcgaagg caagccggtt ccggctggcg
     1441 gagcccgcga ggacgacctc gacacggccg tccgtccctt gcgcgagccg gacccagacg
     1501 cgctggtgcg agaggaagaa cgccatgatg agcccgatca ccatcagggc gcaccccagc
     1561 cagacgatgt tcaccccggg gtccttcgcg acctggagcc cggtgaacat cttcgagctc
     1621 aagccccgga aggagaatac cagggagtcg gcgcgttgcc ggtcgaggtc ggggcgtcgc
     1681 tggacgagcc agaacgcggt ggccggctgc ccgggcttct cgacgacgac ctggagggcc
     1741 ggaccgtttc cctggaagtt ctgatcgtag ttcaccccgc gcacgattcc gtagccgtcg
     1801 atcggtaccg gctcgttggc cgtaagggag agcatgcgca ccggggtccc gtccttgcgg
     1861 gtcaccgcca cctgggccgt cgcgccgccg gcctggccgt agctcgactg gtagaaccag
     1921 atccccttgt actggagcgg gtcgttcacc acgatcgtct tccggacaac ttcccgcccc
     1981 ccatcgatga cgctgaggtc ggatttgtag gccttgggct ggccgctcgg gtacgtctcg
     2041 aggctgaacg aattgcaccg gaccgtgaat ccgaggttct gaatctggag tcccccccgg
     2101 acggggacct gcgtgatcgc ctccccttcg gggatgttca cgtacccctt gaaacccgcg
     2161 acgttaccga cgatcgcccc gatga
//
LOCUS       DATGYW010000619         1585 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_46981, whole genome shotgun sequence.
ACCESSION   DATGYW010000619 DATGYW010000000
VERSION     DATGYW010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1585
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46981"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..426)
                     /locus_tag="VK429_08670"
     CDS             complement(<1..426)
                     /locus_tag="VK429_08670"
                     /inference="COORDINATES: protein motif:HMM:NF012695.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HLN91914.1"
                     /translation="MKAMILAAGLGTRLRPLSLEIPKPVIPVLGQPLCGHAMAFLHEN
                     GAVSFLLNLHHGPETVREKVTAWAANRFPVEFTHEREILGTGGGIGNAREYLRGGTFV
                     TANSDAVARFPIGDALARHRTNGSLATLVLFPARRNRYTP"
     gene            complement(423..1508)
                     /locus_tag="VK429_08675"
     CDS             complement(423..1508)
                     /locus_tag="VK429_08675"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HLN91915.1"
                     /translation="MTEGVDLSALRAGLAALFPGADPMSAKVSELAGDASTRRYYRVR
                     NAPGAPLPSVVVMRYPDEVSPEAELPFLNVHRYLTAAGVPVPVVYRSDPKANLLFLED
                     AGDTMLEDAVREHGARGCLPLYEQCVEILVRIQSAGTRALDGKAIPPRLSFDVAKFTE
                     EIDFFFRHAVREYGGIRLSDREERAIGDLFLPFLEQLSAFPRVLAHRDYHSRNVMVLG
                     SAMTPGHRNLRVLDFQDARMGNVFYDLASLLRDSYVTLPEDAVEDLFYAWRHAATAEL
                     RGAAGDPGAFAWRFDLAALQRNVKAIGTFGNQAHNRGKRIYVRFIPPTVAHLRGNFER
                     NPSMRALAEKLLPILSALAEKAAEGPA"
BASE COUNT          258 a          514 c          575 g          238 t
ORIGIN      
        1 gggggtgtac cgattccttc gggcgggaaa gaggacgagg gtggccagcg acccgttcgt
       61 ccgatggcgg gcgagcgcat ccccgatcgg gaaccgggcg accgcgtcgg aattggcggt
      121 cacgaacgtc cccccgcgca ggtactccct cgcgtttccg attccgcctc cggtcccgag
      181 gatctcccgc tcgtgcgtga actccaccgg gaaacggttc gccgcccacg ccgtcacctt
      241 ctcccggacc gtctccgggc cgtggtggag gttgaggagg aacgacaccg cgccgttctc
      301 gtggaggaac gccatcgcgt ggccgcacag cggttggccc agcacgggga tgaccggttt
      361 cgggatctcg agggagaggg ggcgcaggcg cgttccaagc cccgcggcga ggatcatcgc
      421 cttcatgccg gtccctccgc cgccttttcg gccagcgccg acaggatcgg gaggagcttt
      481 tccgcgaggg cgcgcatcga cgggttccgt tcgaagttcc cccgcaggtg ggcgaccgtc
      541 ggcgggatga agcgaacgta gatccgcttt ccgcggttat gcgcctggtt gccgaaggtc
      601 ccgatcgcct tcacgttgcg ctggagcgcg gccagatcga atcgccaggc gaaggcgccg
      661 ggatcccccg cggcgccgcg cagctccgcc gtggcagcgt gccgccaggc gtagaaaaga
      721 tcctcgaccg cgtcctccgg caaggtgacg taggagtcgc gcaacagcga ggccaggtcg
      781 tagaagacgt ttcccatccg tgcgtcctgg aaatcgagaa cccgcaggtt ccggtggccg
      841 ggggtcatcg cggatccgag caccatcacg ttgcggctgt ggtaatcccg gtgggcgagc
      901 acacgcggga aggcggacag ctgttcgagg aacggaagga agagatcccc gatcgcccgc
      961 tcttcccggt cggacagtcg gatcccgccg tattcccgca cggcgtgccg gaagaagaaa
     1021 tcgatctcct cggtgaactt cgcgacgtcg aaggagaggc gtggggggat cgccttgccg
     1081 tccagcgcgc gggtgcccgc ggactggatc cggaccagga tctcgacgca ctgctcgtag
     1141 agcggcaggc agccgcgcgc gccatgctcg cggaccgcgt cctccagcat cgtgtccccg
     1201 gcgtcttcca ggaagaggag gttcgccttc gggtcggacc ggtagacgac cgggacgggg
     1261 actccggcgg ccgtcaggta ccggtggacg ttcaggaagg gaagttccgc ctccggcgac
     1321 acctcgtccg ggtaccgcat cacgacgacg gaggggaggg gagcgcccgg ggcgttccgg
     1381 acacggtagt accggcgggt ggaggcgtcc cccgcgagtt cggacacctt ggccgacatc
     1441 gggtccgcgc cggggaagag ggcggcaaga ccggcgcgca gggccgagag gtcgacacct
     1501 tcggtcaagg ggcctcccgg aacatccggt cgagaaagcc gcggcactcg gtgaggatcc
     1561 ggtcgaaatc cttgtacgcc gggtt
//
LOCUS       DATGYW010000620         1740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_150341, whole genome shotgun sequence.
ACCESSION   DATGYW010000620 DATGYW010000000
VERSION     DATGYW010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150341"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..970)
                     /locus_tag="VK429_08680"
     CDS             complement(<1..970)
                     /locus_tag="VK429_08680"
                     /inference="COORDINATES: protein motif:HMM:TIGR00238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KamA family radical SAM protein"
                     /protein_id="HLN91916.1"
                     /translation="METHPGDDAVPLRRPKGRTAPVGLPWPQVSREQWNDYRWQLAHR
                     ITSVDDLAGLCRIPAEDAQRLSRVTDIYRLAVTPYYLSLIRFDDPDDPIARQSIPSAE
                     EYFGAEDGEDDPLEEEKDMPVPGLTHRYPDRCLMVVTNFCSMYCRHCTRKRIWTLGEA
                     AKTEFELSKMFAYIRRHEEIRDVIVSGGDPLTLPTDRIEYILKSLRKIPHVEIIRIGT
                     RVPVVLPMRIDDELCAVLGKYGPIWLNTQFNHPREVTTEARQACDRLLRAGVPVNNQT
                     VLLKGVNDHAEIIRKLNTELLRAKVRPYYLFQCDMVRGLDHFRTRLS"
     gene            complement(1025..1561)
                     /locus_tag="VK429_08685"
     CDS             complement(1025..1561)
                     /locus_tag="VK429_08685"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HLN91917.1"
                     /translation="MIDIGARIKHLRQINGLAQADLAERAGLTKGAISQVERNLTSPS
                     VANLFEILTALNETPSSFFADVDEEKVLFRKSDALPSEVTGYKAFDTLLPKSRYRSIV
                     AYRATIAPGKETPPEPPQEGENYIHVLAGRLVLRLGQISYVARKGESLYFAGEQEFAF
                     SNKGKTLVDFLWVRTSGR"
BASE COUNT          287 a          525 c          589 g          339 t
ORIGIN      
        1 tcgacaggcg cgtgcggaaa tggtccagcc cgcgcaccat gtcgcactgg aagaggtagt
       61 aggggcggac cttcgccctc agcaactccg tgttgagctt gcggatgatc tcggcgtggt
      121 cgttgacgcc cttgagcagc acggtctggt tgttcacggg aacgcccgcg cgaaggagcc
      181 ggtcgcacgc ctgacgcgcc tcggtggtga cctcccgggg gtggttgaac tgcgtattca
      241 gccagatggg gccgtacttc cccagcaccg cgcacagctc gtcgtcgatc cgcatcggga
      301 ggaccaccgg cacgcgggtg ccgatccgta tgatctcgac gtgcgggatc ttgcggaggc
      361 tcttcaatat gtactcgatc cgatcggtcg gaagcgtcag cgggtccccg cccgagacga
      421 tcacgtcgcg gatctcctcg tggcgccgga tgtaggcgaa catctttgac agctcgaact
      481 cggtcttcgc cgcctcgccc agcgtccaga tccgcttccg cgtgcaatgg cggcaataca
      541 tcgagcagaa gttggtgacc accatgaggc agcggtccgg gtaccggtgg gtgagccccg
      601 gcaccggcat gtccttctcc tcctcgagcg ggtcgtcctc gccgtcctcg gcgccgaaat
      661 actcctcggc ggaggggatc gactggcggg cgatcggatc gtcggggtcg tcgaaccgga
      721 tgagcgagag gtagtagggg gtgacggcga gccggtagat gtccgtcacg cgggagaggc
      781 gttgcgcgtc ttccgcgggg atccggcaga gccccgcgag gtcgtcgacg gaggtgatgc
      841 ggtgggccag ctgccagcgg tagtcgttcc actgctcgcg cgagacctgc ggccagggaa
      901 ggccgaccgg cgcggttctc cccttcgggc gcctcagcgg tacggcgtcg tcaccgggat
      961 gggtctccat gatcctcctc gagttccccg ttgccggggt ggattgccgg ggcgtccccc
     1021 ggcattatct tccgctcgtg cgcacccaga ggaagtcgac gagcgtcttc cccttgttcg
     1081 aaaacgcgaa ctcctgctcc cccgcgaagt agaggctctc ccccttgcgg gccacgtacg
     1141 agatctgccc gagccgaagg accagccgcc cggcgagaac gtggatgtag ttctcgcctt
     1201 cctgcggagg ctccgggggc gtctccttcc ccggggcgat cgtggcgcgg taggcgacga
     1261 tggagcggta gcggctcttg ggcaggagcg tgtcgaacgc tttgtacccg gtgacctcgg
     1321 aggggagggc gtcgctcttc cggaagagca ccttttcctc gtcgacgtcg gcgaagaaag
     1381 aggagggcgt ttcattgagg gcggtgagga tctcgaagag gttcgcgacg gagggggagg
     1441 tgaggttgcg ctcgacctgg gagatggcgc ccttggtcag gcccgcgcgc tcggccagat
     1501 cggcctgcgc cagtccgttg atctgtcgga ggtgcttgat ccttgcgccg atgtcgatca
     1561 cgggactgtt ttttaaaccc tccgtttagt aaacctgtcc aaagtttaaa aaataggatc
     1621 caacgtgtca accggaaaat gccgattccc atgaactatt ttaatattca cacgcttctc
     1681 tctaatcact tggggacggt ttgctatacc cgaaaaacgg ccttcccgtg ggagtggaat
//
LOCUS       DATGYW010000621         3345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_522360, whole genome shotgun sequence.
ACCESSION   DATGYW010000621 DATGYW010000000
VERSION     DATGYW010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_522360"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..532)
                     /locus_tag="VK429_08690"
     CDS             complement(<1..532)
                     /locus_tag="VK429_08690"
                     /inference="COORDINATES: protein motif:HMM:NF014762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron dependent repressor, metal binding and
                     dimerization domain protein"
                     /protein_id="HLN91918.1"
                     /translation="MTEHAQDEILELLWTLREERKANRAEVLRSAAEPGPERLLEELV
                     EGGMVDASGEEIHLTKSGEDRARGIIRRHRLAEVLLQNLFDLGDSQLEDSACQFEHIL
                     SEPVVESVCTFLGHPPACPHGRPIPRGECCDRIRTEIRPLVMRLTEASLGAAVRIVFI
                     TPRSKKRLEKLSALGIV"
     gene            complement(529..720)
                     /locus_tag="VK429_08695"
     CDS             complement(529..720)
                     /locus_tag="VK429_08695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91919.1"
                     /translation="MAKIRCPLCQREIDPADTACRTGCPMGKTCTLVCCPRCGYSFPM
                     PESKVVNFVKGLFAKGTGK"
     gene            complement(735..2705)
                     /gene="feoB"
                     /locus_tag="VK429_08700"
     CDS             complement(735..2705)
                     /gene="feoB"
                     /locus_tag="VK429_08700"
                     /inference="COORDINATES: protein motif:HMM:TIGR00437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015093 - ferrous iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HLN91920.1"
                     /translation="MKTARAAPGPLGAVILVGNPNVGKSVVFGALTGRYVNVSNYPGT
                     TVEITRGEARDRGTTLEVIDTPGVYSLLPMSEDERVTRDILMREPGARVLQVCDAKNM
                     RRSLMITAQLAEMEVPLVLAVNMTDEARERGVMPRLETLEERLGVSAVTTVAVRKKGT
                     DRLLPLLENPSPSSVRIDYGSGIEAAILRMEGILPAQTPIGKRALAIMLLCGDDSLAP
                     WLAENVSAAGIREMNDIRNGLTEEAGEEIVSRVNRARLSWIDRLLVDLGIEASAPSSK
                     KVAQAFGRYAMDPVYGFPILLGVLALAYGFVGVFGAGYLVDLLQKSFFEGWVVPSVAS
                     ILDRFVPSAFLRDFLVGPYGMISMALSYAVAIVLPIVGTFFLGFGILEDSGYLPRLAV
                     MVDRLFKKIGCNGKAVLPMILGLGCDTMATLTTRILETRRERLIVTLLLALGVPCSAQ
                     LGVILGMLSDVGPAATITWVGLMVGVILAVGFLASKIIPGESSDFILEIPPIRWPQVG
                     NLAVKTMARIEWYLGEAVPLFLVGTLVLFIGDRLGWLLRVQSASEPVVVRLLDLPPKT
                     AEAFLIGFLRRDYGAAGLFSMAKSGMLSHLQVVVSLVTMTLFIPCLANLLVIVKEHGV
                     KIAIGMSLFIFPFAVLVGAAVNFFARWAGITF"
     gene            complement(2702..3151)
                     /locus_tag="VK429_08705"
     CDS             complement(2702..3151)
                     /locus_tag="VK429_08705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011341699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HLN91921.1"
                     /translation="MKRLLERIDREILAAGGKRSRSRAVVIEGFFRARDHVTIEQLTQ
                     SVRESAPGIGAVTVYRTLKLLERLGYAKELDFGEGARRYENNLSPHHDHLVCRQCGTV
                     IEFEDREIENLQNLVTRRHGFHPTAHRLEIYGFCRKCASGASPERSR"
BASE COUNT          608 a         1118 c         1065 g          554 t
ORIGIN      
        1 ggacgatccc aagggcggag agcttctcca gccgcttctt cgaacgcggg gtgatgaaga
       61 cgatccgcac ggcggctccg agggacgcct cggtcagacg catgacgagg gggcggatct
      121 ccgtccggat ccggtcgcag cactcccctc tcgggatcgg gcggccgtgc gggcaggcgg
      181 gagggtggcc gaggaaggtg cagacgctct cgacgacggg ctcggagagg atgtgctcga
      241 actggcaggc gctgtcttcc agctgcgaat cgcccaggtc gaacaggttt tgcaacagca
      301 cctccgcgag gcggtggcgc cggatgatcc cgcgggcgcg gtcttctccg ctcttcgtga
      361 ggtggatctc ctcccccgag gcgtcgacca taccgccctc gaccagctcc tcgagcaggc
      421 gttcggggcc cggttccgcg gcggagcgca gcacctccgc gcggttcgct tttctctctt
      481 cccggagcgt ccagagaagc tcgaggatct cgtcctgggc gtgctcggtc atttcccggt
      541 tcctttcgcg aacagcccct tcacgaagtt caccaccttc gactcgggca tggggaaaga
      601 gtatccgcat cgcgggcaac agacaagcgt gcatgttttt cccatggggc acccggtgcg
      661 gcaggcggtg tccgccggat cgatctcacg ctggcacagc gggcaccgga tcttcgccat
      721 gttcccctcc cggttcaaaa cgtgatcccc gcccaccgcg cgaagaagtt gaccgcggcg
      781 ccgaccagca cggcgaaggg gaagatgaac agggacatcc cgatcgcgat cttcacgccg
      841 tgctccttga cgatcacgag gaggttcgcg aggcacggta tgaaaagggt catggtgacc
      901 aggctcacca cgacctggag atgggagagc atcccgctct tcgccatgct gaacagtccc
      961 gccgccccgt agtcgcgtcg caggaagccg atcaggaacg cctcggccgt cttcggcggg
     1021 aggtcgagca gacggacgac caccggttcc gaggcggact ggacccgcag cagccaacca
     1081 agccgatccc cgatgaatag gacgagggtg ccgacgagga aaagggggac cgcctcccca
     1141 aggtaccact cgatacgcgc catcgtcttt acggcgaggt tccccacctg gggccagcgg
     1201 atgggaggaa tctcgaggat gaagtccgac gactccccgg ggatgatttt cgacgcgagg
     1261 aagccgacgg cgagaatgac ccccaccatc aggccgaccc aggtgatcgt cgcggccgga
     1321 ccgacgtccg acagcattcc gaggatcacc cccagctgcg ccgagcacgg gacccccagc
     1381 gccagaagca gcgtgacgat caaccgctcc ctgcgcgtct cgaggatccg cgtggtcaag
     1441 gtcgccatcg tgtcgcaccc caggccgagg atcatcggaa gcaccgcctt gccgttgcaa
     1501 ccgatcttct tgaagaggcg atccaccatc accgcgagcc ggggcaggta cccggagtcc
     1561 tccaggatcc cgaacccgag gaaaaaggtg ccgacgatcg ggaggacgat cgcgacggca
     1621 taggaaaggg ccatggagat catcccgtac ggccccacca ggaagtcccg caggaacgcc
     1681 gaggggacga accggtcgag gatcgacgcg acggacggga cgacccagcc ttcgaagaac
     1741 gacttctgca ggagatcgac gaggtatccc gcgccgaata ccccgacgaa gccgtaggcg
     1801 agggccagga cgcccagcag gatgggaaac ccgtacaccg ggtccatggc gtaccggccg
     1861 aacgcctgcg cgaccttttt cgaggaaggg gctgacgcct ctatcccgag atcgacgagc
     1921 aaccgatcga tccaggagag acgcgcccgg ttcacccggg agacgatctc ctcccccgcc
     1981 tcctcggtca gtccgttccg tatgtcgttc atctcccgga tcccggcggc ggacacgttc
     2041 tccgccagcc acggagcgag ggaatcgtcg ccgcacagca gcatgatcgc aagcgctctc
     2101 ttcccgatcg gcgtttgcgc cgggaggatc ccctccatcc ggaggatggc cgcttcgatc
     2161 ccgctcccgt agtcgatccg gaccgaggac ggggacgggt tttcgagcag ggggagaagg
     2221 cgatccgtcc cctttttccg gaccgccacc gtggtgacag ccgagacccc gaggcgctcc
     2281 tcaagggtct ccagccgcgg catcaccccc cgctcccgcg cttcatccgt catgttgacg
     2341 gcgagcacga gcgggacctc catctcggcg agctgcgcgg tgatcatcag ggagcggcgc
     2401 atgttcttgg cgtcgcacac ctgcaggacc cgcgcgccgg gttcccgcat caggatatcc
     2461 cgcgtgaccc gctcgtcctc ggacatggga agcagggaat acacgccggg ggtgtcgatc
     2521 acctcgagcg tagttccgcg atcgcgcgcc tcgccgcgtg taatctccac cgtcgtcccg
     2581 ggatagttcg acacgttcac gtaccggccg gtgagggcgc cgaaaacgac gctcttcccg
     2641 acgttggggt ttcccaccag gatcacggcg cccagcggtc ccggagcagc ccttgcggtt
     2701 ttcatcggga tcgctccgga gaagcgccgg aggcgcattt cctgcagaag ccgtagattt
     2761 ccaggcggtg ggccgtcggg tggaacccgt gccgccgggt cacgaggttc tggagattct
     2821 cgatctccct gtcctcgaac tcgatgaccg ttccgcactg ccggcagaca aggtgatcgt
     2881 ggtgagggga caggttgttt tcataccgac gggccccctc cccgaaatcg agttctttcg
     2941 cgtatccgag cctttcgagg agcttcagcg tccggtacac cgttaccgct ccgatccccg
     3001 gagcgctctc ccgtacggat tgcgtaagtt gctcgatcgt gacgtgatcc ctggcccgga
     3061 agaatccctc gattacgaca gcccggctgc ggcttctctt gccgccggcg gccaggatct
     3121 cgcggtcgat ccgttcgagg agccgtttca atgggagggg cgcgctccat tactgatgat
     3181 gaaattcaat ttcatcttac tccgcgggcc accccctgtc aagacgatcc gccggggtgc
     3241 ggccggacgc ccgaaatgaa aacggcccca aagggccgtt tcctgctgcg gtgatccgcg
     3301 gttccggaaa gtaatgaatc tatccctgtc cgccttccgg cgtct
//
LOCUS       DATGYW010000622         2075 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_259185, whole genome shotgun sequence.
ACCESSION   DATGYW010000622 DATGYW010000000
VERSION     DATGYW010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2075)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2075)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259185"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VK429_08710"
     CDS             <1..209
                     /locus_tag="VK429_08710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91922.1"
                     /translation="LAAILAGAYAGVFAGRFFVQGGGAPHALASLLLAAAAVHLFVVL
                     FRKAVSPSEILSFLLFVGVLILWR"
     gene            206..475
                     /locus_tag="VK429_08715"
     CDS             206..475
                     /locus_tag="VK429_08715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005998120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HLN91923.1"
                     /translation="MSAEREFDILNRLGLHARAAAQLVRLANGFACEIRLAKDGMEVN
                     GKSIMGVLMLAAPKDTKILIRAIGLDAEEALAAIGELIARKFGEE"
     gene            480..>2075
                     /gene="ptsP"
                     /locus_tag="VK429_08720"
     CDS             480..>2075
                     /gene="ptsP"
                     /locus_tag="VK429_08720"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR01417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HLN91924.1"
                     /translation="MTEGRVKMRVLKGIPASGGVAIGKGFFLNRVLPRSVRSTVGRDQ
                     IDEEVAAFQRAVARSREQILAIRDGVTDTSSEHHQILSVHLALLEDSMLVEQTVRTIR
                     ENQFAADWAFNKVLQNLLETFHRIEDPYLRERGHDLRQIGHRVLENLAGRPVDSIAAI
                     RDPVVIVAHDLSPADTAQILKSPVLGFATDVGSRTSHTAITARSLGLPAVVGVEGATE
                     EYRSAETVIVDGEEGVVVFDPTEEAIREYQERRKAYAQRTRDLAKFARLPTVTRDGKT
                     LLLLANIEFLEEADVALRSGAYGVGLYRTEFLFLNRKDLPSEDEHFETYRKVAEKFVR
                     HPVTIRTFDLGGDKFASQLELADEMNPAMGLRAIRFCLKEKEIFKPQLRAILRASMYG
                     KVRMMFPMISGVGELREAMAVVEEVRGELRRRRIPYDKEMPIGIMVEIPSAAIVADLL
                     AREAGFFSIGTNDLIQYSLAIDRVNEHVSYLYEPLHPAILRLIRRVVEAGHDAGIPVS
                     MCGEMAGEPFYSYALLGLGLDELS"
BASE COUNT          338 a          655 c          741 g          341 t
ORIGIN      
        1 tgctggcggc gatcctcgcc ggggcgtacg ccggggtctt cgccgggcgt ttcttcgtcc
       61 agggaggggg ggcgccccac gcgctggcgt cgctccttct ggccgccgcc gcagtgcacc
      121 tgttcgtggt cctcttccgg aaggcggtct cgccgtcgga aatactgtcg tttcttctct
      181 tcgtgggggt gctgatcctg tggaggtgag cgcggaacgc gagttcgaca tcctgaaccg
      241 gctcggactg cacgcccgcg ccgcggcgca gctggtgcgc ctggcgaacg gcttcgcctg
      301 cgagatccgc ctcgcgaagg acgggatgga agtcaacggg aagagcatca tgggcgttct
      361 gatgctggcg gcgccgaagg acacgaagat cctgatccgg gcgatcgggc tcgatgcgga
      421 agaggccctg gcggcgatcg gggagctgat cgcacgaaag ttcggggagg agtaggagga
      481 tgacggaagg ccgcgtgaag atgcgcgtcc tcaaggggat cccggcctcg ggaggggtcg
      541 cgatcgggaa agggtttttc ctgaaccgcg tcctcccaag atcggtccgc tccacggtcg
      601 gccgcgatca gatcgacgag gaggtcgccg ccttccagcg ggcggtggcc cgctcccggg
      661 agcagatcct cgcgatccgg gacggcgtga cggacacctc ctccgaacat catcagatcc
      721 tctcggtcca cctggcgctc ctcgaggact cgatgctggt cgagcagacg gtccggacga
      781 tccgtgagaa ccagttcgcc gcggactggg cgttcaacaa ggtgctgcag aacctcctcg
      841 agacgttcca ccggatcgag gatccgtacc tgcgggagcg tggacacgac ctgcggcaga
      901 tcggccaccg ggtcctcgaa aacctcgccg ggcgccccgt ggactcgatc gccgcgatcc
      961 gcgatccggt ggtcatcgtg gcccacgatc tctccccggc ggacaccgcg cagatcctga
     1021 agagccccgt gctcggcttc gccaccgacg tgggaagccg gacgtcccac accgcgatca
     1081 cggcgcgttc cctggggctc ccggcggtcg tcggggtcga gggggcgacg gaggagtacc
     1141 ggtccgcgga aacggtcatc gtcgacggcg aggaaggcgt ggtcgtcttc gacccgacgg
     1201 aggaggcgat ccgggagtac caggagcggc gaaaggccta cgcgcaacgg acccgcgacc
     1261 ttgcgaaatt cgcgcggctg ccgacggtca cgcgcgacgg gaagacgctg ctgcttctcg
     1321 cgaacatcga gttcctggaa gaggcggacg tcgcgctgcg cagcggcgcc tatggtgtgg
     1381 ggctctaccg cacggagttc ctcttcctca accggaagga tctcccttcc gaggacgagc
     1441 acttcgagac gtaccggaag gtagcggaga agttcgtgcg ccacccggta acgatccgca
     1501 ccttcgacct cggcggcgac aagttcgcgt cccagctcga gcttgccgac gagatgaacc
     1561 cggcgatggg gctgcgggcg atccggttct gcctgaagga aaaggagatc ttcaagcccc
     1621 agctccgtgc gatcctgcgc gcctcgatgt acgggaaagt ccggatgatg tttccgatga
     1681 tctcgggggt gggggagctt cgggaggcga tggccgtggt cgaggaggtg cggggggagc
     1741 tgcgccgccg gcggatcccc tacgacaagg agatgcccat cgggatcatg gtcgagatcc
     1801 cctccgcggc gatcgtggcc gacctgctcg cgcgggaggc cggattcttc agcatcggca
     1861 cgaacgacct gatccagtac tcgctggcga tcgaccgggt caacgaacac gtctcctacc
     1921 tctacgagcc gcttcacccc gcgattcttc ggctgatccg gcgggtcgtg gaggccggcc
     1981 acgacgcggg gatcccggtg tcgatgtgcg gggagatggc cggggagccg ttctactcct
     2041 acgcgttgct ggggctcggg ctggacgagc tcagc
//
LOCUS       DATGYW010000623         2710 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_522425, whole genome shotgun sequence.
ACCESSION   DATGYW010000623 DATGYW010000000
VERSION     DATGYW010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2710
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_522425"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(47..850)
                     /locus_tag="VK429_08725"
     CDS             complement(47..850)
                     /locus_tag="VK429_08725"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLN91925.1"
                     /translation="MDSTREFDHRFKIAVVKNFDQSADAYDRFEERHHLFEILSKRQL
                     ELIEPARPERILDVGCGTGISTLALHQAMAGQSPNIYAIDISERMLLRARERCKSLHG
                     VYFIQGDAENLSTYFNDSFDAIFYTASIFLLPGFAESLRQACNLLVPGGVLSISYYAG
                     LFDETGNDAIRKAFPDQKYQYGVVLIGDLLSCLESLQGTRFTRIDYRFEVSRDFLFDF
                     LSIPAQSAGLFPKIPYLERIPKIRDFCDLLAKRVDPIFMGWEFLIARKQ"
     gene            complement(850..>2710)
                     /locus_tag="VK429_08730"
     CDS             complement(850..>2710)
                     /locus_tag="VK429_08730"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HLN91926.1"
                     /translation="DALTVARDLPSKENFQRIRSGTEASLPVFIGTPRELPDRGRVLP
                     LAFLVAGGTRQDQHYVIGALSLADVDGYLGDLRRRGIHCRIVDPGGNTLFGASGDFPG
                     RNDSASRSEGEAPLMGGALSREWSLQMYIPNAGSRLAFLPQAILATFFLLNMFTLVFL
                     RHRFILPAEAALETVSETVVAQGEILPQRAAPAHIAEAVNRLLSRCRKEWEEENRSVR
                     NSTERRLREITESQKNLLSHHRLTKKMLQSREADEVFEVLLAGVTEGYGFSGALIGKV
                     STDGYLDFQGETDPVSGTPLRVPLWNPGSLLARTFWSGNLFHVSPRELPHLPEEESIL
                     GSFPVLCLPVLRNLKVRCVEAKNCVDRTCPNYHSENLRCWLRYIPQEFFTGGGNPEGY
                     REAITACLRCEVFPSSALLVVRSLEGGKVLNRENAVPISNLASEAGHALEVVSLYDNM
                     KIMAVTDGLTGLFNHREFYQSLRRELERARRYRHPLSLLMIDVDDFKQFNDRYGHPAG
                     DFALRSIAGLLRKCARTTDIIARYGGEEFAVILPESTPGGALMVAERVKLDVADHNFI
                     HNAREPVHLTVSIGIYTSENGDITEDQIVSLADEASYIAKKAGKNQVVVKASA"
BASE COUNT          595 a          769 c          797 g          549 t
ORIGIN      
        1 cgtccggtaa tgtatattat gtcaaataaa ggaaggccga gcgcaatcat tgcttccgcg
       61 cgatcaggaa ctcccaaccc atgaaaatcg ggtccaccct cttcgcaaga aggtcgcaga
      121 aatcacggat cttcgggatc cgttccaggt acgggatctt cgggaaaaga cctgcggatt
      181 gcgcagggat cgaaaggaag tcgaacaaga aatcacggct gacctcgaaa cggtaatcga
      241 tccgggtgaa ccgtgttccc tgaagggatt caaggcacga caacaggtct ccgatcagaa
      301 ccacgccgta ttgatatttc tgatcgggaa acgccttccg gatggcatcg ttccctgttt
      361 cgtcgaaaag tcccgcatag taactgatcg agagcactcc tccggggaca aggagattgc
      421 atgcctgccg caacgattcg gcaaaaccgg gtaaaaggaa aatcgaggcc gtataaaaga
      481 tcgcgtcgaa cgagtcgttg aaatatgtcg aaagattctc cgcgtccccc tggatgaaat
      541 aaaccccatg caaggattta caacgttccc tcgcccgaag gagcatccgt tcgctgatgt
      601 cgattgcgta gatgttcggt gactggccgg ccatggcctg atggagagcc agtgtagaga
      661 ttccggttcc acacccgaca tcgaggattc tctccggcct cgccggctcg atcaactcga
      721 gctggcgctt cgacaagatt tcgaaaagat ggtggcgctc ctcgaaacgg tcgtaggcgt
      781 cggcgctctg gtcgaagttt ttcacgaccg ctatcttgaa acggtggtcg aattccctcg
      841 tcgagtccat caggcggacg ccttcacgac tacctgattc ttcccggcct ttttggcgat
      901 gtaggaagcc tcgtctgcga gggacacgat ctggtcttcg gtgatatccc cgttttcaga
      961 ggtgtaaatc cctatgctta cggttagatg taccggttca cgagcgttat ggatgaagtt
     1021 gtgatcggct acatccagtt ttaccctctc ggcgaccatc agggcaccgc cgggggtcga
     1081 ctcggggagg atgaccgcga actcctctcc cccgtatcgc gcgatgatat ccgtcgttcg
     1141 ggcgcatttc cttaaaaggc ctgcgatact ccgaagcgca aagtctccgg caggatgacc
     1201 gtaccgatcg ttgaactgtt tgaaatcgtc cacgtcgatc atgaggaggg acaggggatg
     1261 tcggtacctt cgggcacgtt cgagttccct ccgcaacgac tgatagaatt ctctatggtt
     1321 aaaaaggcct gttaaaccgt ccgttactgc cattatcttc atgttgtcat agagggatac
     1381 gacctcgagg gcatggccgg cttccgaagc gaggttcgaa atggggacgg cattttcccg
     1441 attcagcacc tttccgccct cgaggctccg gaccacaagg agggcggagg acgggaaaac
     1501 ttcgcatcgg aggcaggctg tgatcgcttc gcgatagccc tcggggttcc ccccgcccgt
     1561 gaagaactcc tgcggaatgt acctcaacca gcacctgagg ttctcggaat gatagttggg
     1621 gcaggtccga tccacacaat ttttcgcctc cacgcatcgc accttgagat ttctcaatac
     1681 cggaaggcaa agaacgggaa aggaaccaag aatcgactcc tcctcgggaa gatgcggcag
     1741 ttcacggggg gatacgtgaa acagattccc ggaccagaac gtccttgcca gcagcgagcc
     1801 gggattccat agagggaccc gaagcggagt tcccgagacg ggatcggttt ccccttggaa
     1861 gtcgaggtac ccgtcggttg agaccttccc gatcaacgcc cccgaaaaac cgtacccttc
     1921 cgtgaccccg gcgaggagga cctcgaatac ctcgtcggcc tcgcgtgact ggagcatttt
     1981 tttggtgagc cggtggtgcg acagcaggtt cttctgggat tcggtgatct cccgaagccg
     2041 tcgctcggta ctattccgga ccgatcggtt ttcctcttcc cactccttac ggcaacgcga
     2101 cagaaggcgg ttgacggcct cggcgatatg cgcgggggcg gcccgttggg gcaggatctc
     2161 gccttgcgcg acgacggttt ccgatactgt ctccaacgcc gcctccgccg gaaggataaa
     2221 gcgatgacga aggaagacaa gagtaaacat gttcagaagg aagaacgttg cgaggatggc
     2281 ctgcgggagg aacgccagac gggagcccgc gttcggaatg tacatctgca gggaccactc
     2341 cctggagagc gcaccgccca tcaatggcgc ttctccctcg gaccgggatg cggaatcgtt
     2401 gcgccccggg aaatccccgc ttgcgccgaa cagggtgttc cctccaggat cgacgatccg
     2461 gcaatggata cccctgcgtc ggaggtcacc gaggtagccg tcgacgtccg cgagggagag
     2521 tgccccgatg acgtagtgct ggtcctgacg cgttccgccg gcgacaagga acgcgagcgg
     2581 aaggacgcgc ccccggtccg gaagctcccg gggcgtaccg atgaatacgg gaagcgacgc
     2641 ctccgtcccg gaacggatcc gctggaagtt ctcttttgag ggcagatccc tggcgacggt
     2701 cagggcgtcg
//
LOCUS       DATGYW010000624         2534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_47504, whole genome shotgun sequence.
ACCESSION   DATGYW010000624 DATGYW010000000
VERSION     DATGYW010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47504"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VK429_08735"
     CDS             <1..724
                     /locus_tag="VK429_08735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011938073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HLN91927.1"
                     /translation="LVAGSRPQEVARASAAVAAARAEAERLSADLERARTLHARDVIS
                     RQEFERARAAYEVAEERRNEAMESLHLVEEGPRREQIERARAQVRQAKEALELARTRL
                     SYAAIASPLAGVVLSKNAEPGDYVAPGTPVVTVGSLKDPWLRAYIEETDLGRVKVGQA
                     VEVTADTYPGKKYAGRISFISSQAEFTPKNVQTRKERVKLVYRIKVDVSNPDMELKPG
                     MPADAAIRTEEGSGVRDGRHTN"
     gene            705..1637
                     /locus_tag="VK429_08740"
     CDS             705..1637
                     /locus_tag="VK429_08740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN91928.1"
                     /translation="MDAIRTEGLGKVFGPTVALDRLTLSVNEGEIFGLVGPDGAGKTT
                     VMRLLAGILDPSGGEGWVMGHSIRTEAGKIHGEIGYMSQRFGLYPDLSVMENIEFYAD
                     LYGVPRRGGQEKIDALLAFSNLTPFKRRLAGNLSGGMKQKLGLACALVHTPKVLLLDE
                     PTNGVDPVSRRDFWRILYGLLREKVTIFVSTAYLDEAERFQRLALLHQGKLLALGTPE
                     EVKGLYPGAILEVRCDDPRRAVAVLRGELPLATVGLFGDRVHVGSREPALTGQGIEKA
                     LRNAGIGVSRVQPVEPILEDVFVAVLSPDGEARG"
     gene            1634..>2534
                     /locus_tag="VK429_08745"
     CDS             1634..>2534
                     /locus_tag="VK429_08745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011938075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN91929.1"
                     /translation="MNAADDRFSVAVRNLERRFGSFVAVNGVSFEVRKGEIFGFLGPN
                     GAGKSTTIRMLCGLLAPTSGEGTVAGFDLKTEAEKIKQHIGYMSQRFSLYEDLTVEEN
                     IDFFSGIYRIPAERKAERKEWVLRMAGLSDHAGTKTAFLSGGWKQRLALGCAVLHAPP
                     ILFLDEPTSGVDPVSRRNFWELIYELAGKGITVFVTTHYMDEAEYCDRLGLIYRGELV
                     ALGTPEEMKTRLMKDQVVEILLERPQDAIGLLEGLAAVKGAALFGKGIHAVVDRAQEA
                     VPSLRSSLEAGGFPVRRIGKIVPS"
BASE COUNT          451 a          762 c          904 g          417 t
ORIGIN      
        1 gcttgtcgcc gggtcgcgcc cccaggaggt cgcgagagcc agtgcggcgg ttgcggcggc
       61 gcgtgccgag gcggagcgac tttccgcgga tcttgaacgc gcaaggacgc ttcatgcgag
      121 ggacgtgatc tcccgccagg aattcgagag ggccagggcg gcttacgagg tggccgaaga
      181 gaggcggaac gaagcgatgg aaagcctcca tcttgtggag gaagggccca ggcgcgaaca
      241 gatcgagcgg gcccgcgccc aggtccggca ggcgaaggag gctctggaac tggcccggac
      301 gcggctctcc tacgccgcga tcgcctcccc ccttgccgga gtggtccttt ccaagaacgc
      361 ggagccgggg gattacgtgg ctccggggac gcccgtcgtg acggtggggt cgctcaagga
      421 cccgtggctc cgggcgtaca tcgaagagac cgacctgggg cgggtcaagg tgggccaggc
      481 cgtcgaggtg accgccgaca cctacccggg gaagaaatac gccgggcgca tttcttttat
      541 ctcctcgcag gccgaattta cgccgaagaa cgttcagacg cggaaagagc gcgtcaagct
      601 ggtctaccgc atcaaggttg acgtctccaa tccggacatg gaactgaaac cgggaatgcc
      661 ggcggacgcg gcgatccgga cggaggaggg aagcggggtt cgcgatggac gccatacgaa
      721 ctgaagggct gggcaaggtg ttcggcccca cggtggcgct ggaccggctt accctttcgg
      781 tgaacgaagg ggagattttc ggactggtgg ggcccgacgg cgcggggaaa accaccgtga
      841 tgcgcctcct cgccgggatt ctcgacccct cgggagggga aggctgggtg atgggtcatt
      901 cgatccgtac ggaggcgggg aagatccacg gggagatcgg gtacatgagc cagcggttcg
      961 gtctgtaccc cgacctctcc gtcatggaaa acatcgaatt ctatgccgac ctctacggcg
     1021 tcccgcggag gggcgggcag gaaaagatcg atgcgctgct ggcgttttcc aacctcaccc
     1081 cgttcaagcg gcgcctggcg ggaaacctct ccgggggaat gaagcagaaa ctggggctcg
     1141 cctgcgcgct cgtccacacc ccgaaggtgc tcctcctcga cgagccgacg aacggcgtcg
     1201 acccggtctc gcgacgtgat ttctggcgga tcctgtacgg ccttctgcgg gagaaggtca
     1261 ccattttcgt ctccaccgcc tatctcgacg aggcggagcg gttccagcgg ctggccctcc
     1321 tgcaccaggg gaaactgctg gccctcggga cgccggagga ggtgaagggg ctctatccgg
     1381 gggcgatcct ggaagtgcga tgcgacgatc cccgtcgggc ggtcgcggtt ctccggggag
     1441 agcttcccct cgcaaccgtc gggctcttcg gcgaccgggt tcacgtgggc agccgggagc
     1501 ccgcgctgac cggccaaggg atcgagaagg ccctccggaa cgcggggatc ggggtttccc
     1561 gggttcaacc cgtcgaaccg atcctcgaag acgtcttcgt cgccgttctt tctcccgacg
     1621 gggaggcgcg aggatgaatg cggccgatga tcggttttcg gtagcggttc gcaatctgga
     1681 aagacggttc gggtccttcg tcgccgtgaa cggggtgagc ttcgaagtcc gcaaggggga
     1741 gatcttcggc ttcctgggcc ccaacggggc gggcaagtcg accaccatcc ggatgctgtg
     1801 cgggctcctt gcccccacct cgggggaggg gaccgtggcc gggttcgacc tgaaaaccga
     1861 ggcggaaaag atcaagcagc atatcggtta catgtcccag cgcttctccc tctacgagga
     1921 cctgaccgtg gaggagaaca tcgacttttt cagcgggatc taccggatcc ccgcggagag
     1981 gaaggcggag aggaaggagt gggttctccg gatggcgggc ctctccgacc atgcgggcac
     2041 gaaaaccgcg ttcttgtccg ggggctggaa acagcggctg gcgctagggt gcgcggtcct
     2101 ccatgcgccg cccatcctgt tcctcgacga gccgacctcc ggcgtggacc cggtcagccg
     2161 ccgcaacttc tgggaactga tctacgagct cgccggaaag ggaatcaccg tgttcgtcac
     2221 gacccattac atggacgagg cggagtactg cgaccgcctg gggctcatct accgcgggga
     2281 gctcgtggcg ctcgggaccc cggaggagat gaaaacccgc ctgatgaagg atcaggtggt
     2341 ggagatcctg ttggaaagac cacaggacgc gatcggtctt ctcgaggggc tcgcggccgt
     2401 aaagggggcg gcccttttcg gaaaggggat ccacgcggtg gtggaccggg cgcaggaagc
     2461 ggtcccctcc ctgcggtcct ccctggaggc cggagggttc ccggtgcgcc gtatcggaaa
     2521 gatcgttccc tccc
//
LOCUS       DATGYW010000625         2990 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_150541, whole genome shotgun sequence.
ACCESSION   DATGYW010000625 DATGYW010000000
VERSION     DATGYW010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2990
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150541"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VK429_08750"
     CDS             complement(<1..190)
                     /locus_tag="VK429_08750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HLN91930.1"
                     /translation="MTPIPFDKAALIQGLYSILPELVVIATAIVVLLADLALPERGKK
                     SLCHLGIAGIAVAILATLS"
     gene            complement(187..1767)
                     /locus_tag="VK429_08755"
     CDS             complement(187..1767)
                     /locus_tag="VK429_08755"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015839191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HLN91931.1"
                     /translation="MTGVALLDQHLLSVLIALPMIGAALLLFFPRGADDAIRKATLLV
                     TVAEFLLSLAVVARFDAGIAGMQLVERAPWIPQYGISYIVGVDGISLWILMLTTFIMP
                     ITILSTWSAVAKSVKEFMVFMLVLETAMVGVFLATDLFLFYIFWELVLIPMYFLIGVW
                     GGERRIYAAIKFFLYTFVGSVLMLVAIIVLYFHHHAVTGVYTMDLMKLYELTIPVNLQ
                     LWLFAAFFLAFAFKVPMFPFHTWLPDAHVEAPTAGSVILAAILLKMGTYGFLRFAMAL
                     FPVAATDWTPLIAVLAVIGILYGALVAMVQKDVKKLVAYSSVSHLGFVMLGLFAFNLQ
                     GIEGAILQMVNHGVSTGALFLIVGIIYERRHTRLISEFGGLSKVVPVFSLCFMVVTLS
                     SIGVPGTNGFVGEFLILLGAFKVQKWYAVVAATGVIFAAVYMLWMFQRVMYGKITNEE
                     NLRLTDMNGREVAYMLPLLLFILWIGIYPQPFLRRMDASVNAFVTRFEAKKQAALAGS
                     PAGETMLVRYFDLKKGPR"
     gene            complement(1764..>2990)
                     /locus_tag="VK429_08760"
     CDS             complement(1764..>2990)
                     /locus_tag="VK429_08760"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HLN91932.1"
                     /translation="HAATMVTAGVYMVARSSALFLLAPDTMMVVAVIGAVTAIFSATI
                     GICQTDIKRVLAYSTVSQLGYMFLACGVGAFTAGIFHLMTHAFFKALLFLGSGSVIHA
                     LSGEQDMRKMGGLRKYVPVTFVTMLAGTLAIAGIPGLSGFFSKDEILWQSFSSSHGSP
                     VLWGIAAVAAGITAFYMFRLVFLTFFGESRIDPEVEKHAHESPWTMTVPLTILAVLSV
                     AGGWIGIPAVLGGGNLFEHWMAPVFHSVAAAGAHGAESAASLGTPLHGGMPGGAAHHP
                     AALEIGLMALSVAIALCGIGLAYFLYRVRTGKPDEIASRWPTLYNVVYNKYYIDEFYE
                     WAVIRRIVTFSTGLWEMFDALFIDGIVNGAADLVRAAGDRVRKLQGGVVGGYAFSLLA
                     GAVLLVGYILYRSVVQ"
BASE COUNT          619 a          948 c         1008 g          415 t
ORIGIN      
        1 gcgacagcgt ggccaggatc gcgaccgcaa tgcccgcgat cccgaggtgg cacaagctct
       61 tcttgccgcg ctccggaagg gccaggtcgg ccagcaggac cacgatcgcc gtggcgatca
      121 cgaccagctc ggggaggatg ctgtagagcc cctggatcag cgcagccttg tcgaagggga
      181 tcggcgtcat cgcggcccct tcttcaggtc gaagtagcgg acgagcatcg tctcacccgc
      241 gggggagccg gcgagcgcag cctgcttctt cgcctcgaac cgcgtgacga acgcgttcac
      301 ggaggcgtcc atccgccgca ggaacggctg cgggtagatc ccgatccaca ggatgaacag
      361 cagcagcggg agcatgtacg cgacctcccg cccgttcatg tcggtgaggc gaaggttctc
      421 ctcgttcgtg atcttcccgt acatcacccg ctggaacatc cagagcatgt agacggcggc
      481 gaagatgacc ccggtcgcgg cgacgacggc gtaccatttc tggaccttga acgcccccag
      541 caggatcagg aattcgccga cgaagccgtt cgttccgggc acgccgatcg aggagagggt
      601 cacgaccatg aaacagaggg aaaagaccgg caccactttg gacagcccgc cgaactcgga
      661 gatgaggcgg gtgtggcgcc gctcgtagat gatcccgacg atgaggaaga gcgccccggt
      721 ggagacgccg tgattgacca tctgcaggat ggcgccctcg atcccctgca ggttgaaggc
      781 gaacagcccc agcatgacga agcccaggtg cgacacggag gagtaggcaa ccagtttctt
      841 cacgtccttc tggaccatcg ccaccagcgc cccgtagagg atcccgatga cggcgagaac
      901 cgcgatcagc ggcgtccagt cggtggcggc gacggggaac agggccatgg cgaaccgcag
      961 gaagccgtac gtccccatct tcagcaggat ggccgcgagg atcaccgaac ccgccgtggg
     1021 cgcctcgacg tgcgcgtccg gcagccacgt gtggaacggg aacatcggca ccttgaaggc
     1081 gaaggcgagg aagaaggccg caaagagcca cagctgcaga ttcaccggga tcgtgagctc
     1141 gtagagcttc atgaggtcca tggtgtagac cccggtcacg gcgtgatggt ggaagtagag
     1201 gacgatgatc gcgaccagca tcaggaccga gccgacgaag gtgtacagga agaacttgat
     1261 cgccgcgtag atccgccgct cgccccccca caccccgatc aggaagtaca tcgggatgag
     1321 gaccagctcc cagaagatgt agaagaggaa caggtcggtg gcgaggaaca ccccgaccat
     1381 cgcggtctcg aggacgagca tgaagaccat gaactccttc acgctcttcg ccacggccga
     1441 ccaggtcgag aggatcgtga tcggcatgat gaaggtcgtg agcatcagga tccagaggga
     1501 gatcccgtcc accccgacga tgtaggagat cccgtattgc ggaatccatg gggcccgctc
     1561 caccagctgc atcccggcga tcccggcgtc gaagcgcgct acgaccgcaa gggagaggag
     1621 gaactccgcg accgtcacga ggagcgtggc cttccggatc gcgtcgtccg cccccctcgg
     1681 gaagaacagg agcagcgccg cgccgatcat cggcagcgcg atcaggaccg acagtaggtg
     1741 ctggtcgagc agcgcgacgc cggtcattgg accacgctcc ggtagaggat gtaccctacg
     1801 aggaggaccg cccccgccag cagggagaag gcgtacccgc cgacgacccc gccctggagc
     1861 ttccgcaccc ggtcgcccgc ggcgcgaacg aggtcggcgg cgccgttgac gatcccgtcg
     1921 atgaagagcg cgtcgaacat ctcccacagc ccggtggaga aggtaacgat ccgccggatc
     1981 accgcccact cgtagaattc gtcgatgtaa tacttgttgt acacgacgtt gtagagggtc
     2041 ggccatctcg aagcgatctc gtccggcttc ccggtgcgga cccggtacag gaagtacgcg
     2101 aggccgatgc cgcacagggc gatcgcgacc gagagcgcca tcaggccgat ctcgagggcc
     2161 gccgggtgat gcgcagctcc ccctggcatt ccgccatgga gcggagtccc gagggaggcc
     2221 gcgctctccg ccccatgggc gcctgccgcg gcgacggagt ggaagaccgg cgccatccaa
     2281 tgttcgaaga ggttgccgcc gccgagaacg gccgggatac cgatccaacc gccggcgacc
     2341 gacaggaccg cgaggatcgt cagcggcacg gtcatcgtcc agggggattc gtgggcgtgc
     2401 ttctcgacct cggggtcgat gcgggattcg ccgaagaagg tgaggaagac gagccggaac
     2461 atgtagaacg ccgtgatccc cgcggcgacg gccgcgatgc cccacaggac cgggctcccg
     2521 tgggacgagg agaacgactg ccacaggatc tcgtccttgg agaagaagcc cgacagcccc
     2581 gggatccccg cgatcgcgag agtgccggcg agcatggtga cgaaggtgac ggggacgtac
     2641 ttcctcagcc cccccatctt ccgcatgtcc tgctccccgg agagggcgtg gatcacggat
     2701 cccgacccga gaaagaggag cgccttgaag aaggcgtgcg tcatcaggtg gaagatcccg
     2761 gcggtgaacg ccccgacgcc gcaggcgaga aacatgtacc cgagctgcga cacggtggag
     2821 tacgccagga cccgcttgat gtcggtctgg cagattccga tcgtcgccga gaagatcgcg
     2881 gtgaccgcgc cgatgaccgc cacgaccatc atcgtgtcgg gggccaggag gaacagggcg
     2941 ctggaacggg cgaccatgta gacaccggcg gtgaccatcg tggccgcatg
//
LOCUS       DATGYW010000626         1767 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_93455, whole genome shotgun sequence.
ACCESSION   DATGYW010000626 DATGYW010000000
VERSION     DATGYW010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93455"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            548..1069
                     /locus_tag="VK429_08765"
     CDS             548..1069
                     /locus_tag="VK429_08765"
                     /inference="COORDINATES: protein motif:HMM:NF024949.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HLN91933.1"
                     /translation="MELSEIGNRIRSERRRKGLTQARLAEEAGLSRATLNGLEKGTIR
                     ELGFHKLDAILGILGLALTPTRARKGTGPSPILMKRMAQRYVWWQPPEASVADPRRVI
                     AQVMDVGTIEDIHALARAVGRNTLTGVLKQARPGWFRPRSWAFWHIALGRTTAGRIPP
                     IPSRRPDALPDPA"
     gene            1047..1718
                     /locus_tag="VK429_08770"
     CDS             1047..1718
                     /locus_tag="VK429_08770"
                     /inference="COORDINATES: protein motif:HMM:NF020419.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyl transferase AbiEii/AbiGii toxin
                     family protein"
                     /protein_id="HLN91934.1"
                     /translation="MPFRTRRDILPPGQEKLWPLLAPLKDLGYCLYGGTALALRFGHR
                     QSMDFDFFTERALDRKALETTLPWFRSGTVLRAEPDTHVLLAAVPRSRREVKVSFFGG
                     LRFGRVGTPDLSDDGVILVASVRDLLATKLKAFFDRVEPKDYLDVAEILSSGGDLLQG
                     LSDAGALFGKSFSPAECLRVLCWFGEPGLGSLPADCRRTLESRVKATWNKPLPPSRKA
                     ALSLT"
BASE COUNT          370 a          508 c          530 g          359 t
ORIGIN      
        1 ttgcgacgca cggcccatcg tcaagaagag aggagatcat ttccgagtca aggtggagcc
       61 cggaaggttc ccgttccggg acctcgacga gggacaagag cgagatgaca cagattgaaa
      121 gaacaacgat cctcgagaga ccgtgccttc ccttcatctc atcttccgat tccccgctcg
      181 cggcggatca aggggcggca acatttgcga gccgacgact gtagttgaag ttataaaatt
      241 acttgctaca tgtcaataac aatcttccat ttattgccaa ataaaatatt gaataagagg
      301 taacagggcc aagaaaaata acggtgtact gaaatttttc ttaatgacgg caggctgttg
      361 tttgtaaaag gattcgccat cccgtctgct atagcctaag aagaactcag gtttcataat
      421 tattcaaccg acgaatagat tgcggacatt gatgccgggc gtccgctcga attcccggct
      481 tcctcatatt gcaaattggg ggtttcatgt ataatatatt tgacacgtag aggaggtctc
      541 aggcgcgatg gagctttccg aaatcgggaa ccggatccgg tcggagcgca ggaggaaggg
      601 gctcacccag gcgcgcctcg ccgaagaggc cggcctgtcc cgggcgacct tgaacggcct
      661 cgaaaagggg accatcaggg aactcgggtt ccacaagctc gatgcgatcc tgggaatcct
      721 tgggctcgca ctgaccccga cccgggcgag gaaagggacc gggccttccc ccatcctgat
      781 gaaacggatg gcgcaacggt atgtctggtg gcaacccccg gaagcgtccg tggcggatcc
      841 gcggagagtc atcgcgcagg tgatggatgt cgggacgatc gaagacatcc atgcgctggc
      901 cagggctgtc gggagaaaca cgttgacagg cgtcctgaaa caggcgcgac cgggatggtt
      961 ccgcccaagg tcctgggcgt tctggcacat agcactgggt cggacaaccg ccggtcgcat
     1021 ccccccgatt ccttcaagga ggcccgatgc ccttccggac ccggcgtgac atcctccccc
     1081 ccggtcagga gaagctttgg ccgctgctgg ccccactgaa ggatctgggg tattgccttt
     1141 atggaggaac ggcgctggcc ctgcgcttcg gccatcgcca gtcgatggat ttcgatttct
     1201 tcaccgaacg cgctctcgat aggaaggcgc tggaaacgac tcttccctgg ttccggagtg
     1261 gaaccgttct tcgggcggag ccggatacac acgtcctcct tgccgccgtc ccgcgttcca
     1321 ggcgcgaggt gaaggtctct ttcttcggcg ggcttcgctt cgggagagtc ggcaccccgg
     1381 atctctccga tgacggggtg atccttgtcg cttccgtcag ggatcttctg gccaccaagc
     1441 tcaaagcctt cttcgaccgg gtcgaaccga aggattatct ggacgtcgcg gaaattcttt
     1501 ccagcggggg cgatctcctg caggggctct ccgacgccgg ggcgctcttc gggaaatcgt
     1561 tctcgcccgc cgagtgccta cgcgtcctct gctggttcgg ggaacccgga ctgggctccc
     1621 tgccggccga ttgcaggagg acgctggaaa gccgcgtgaa ggctacctgg aacaaaccac
     1681 tgcccccctc ccggaaagcc gccttgtcgc tgacctgagg aggagcaagg atcgctactt
     1741 tcgctgcacc ggacgtggga gaatatt
//
LOCUS       DATGYW010000627         3360 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_358963, whole genome shotgun sequence.
ACCESSION   DATGYW010000627 DATGYW010000000
VERSION     DATGYW010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3360
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_358963"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..828)
                     /gene="ilvC"
                     /locus_tag="VK429_08775"
     CDS             complement(<1..828)
                     /gene="ilvC"
                     /locus_tag="VK429_08775"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007194735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HLN91935.1"
                     /translation="MVTMYREQDAKMELLKGKTIAILGYGSQGHAHANNLKESGFNVI
                     VGEVPGGENEKKAKEAGFEVADAASMVKKADVVVMLLPDELQGGIYRASVGPNLRKGA
                     FLMFAHGFNIHFGQIVARPDVNVFMVAPKGPGHLVRAQYVKGEGVPALIAVHQDPAGI
                     TKDVALAYAAGIGAARAGVIETNFREETETDLFGEQAVLCGGATALVIAGYETLVEAG
                     YSPEMAYFECVHELKLIVDLIYEGGISTMRYSISNTAQYGDLTRGPRVVSPETKAEMK
                     "
     gene            complement(883..1359)
                     /gene="ilvN"
                     /locus_tag="VK429_08780"
     CDS             complement(883..1359)
                     /gene="ilvN"
                     /locus_tag="VK429_08780"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017951674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HLN91936.1"
                     /translation="MRHTISVLVENEFGVLSRVSGLFSGRGFNIESLCVAETMEPQVS
                     RMTIVTTGNDQIIEQILKQLNKLIPVLKVIDFTGVDTVDRELVLVKVNADGDAKQEVL
                     RLVDIFRARIVDVAPRCYTIEMTGGEGKVQAFLQMLRPLGIREVVRTGKIAISRGM"
     gene            complement(1391..3085)
                     /gene="ilvB"
                     /locus_tag="VK429_08785"
     CDS             complement(1391..3085)
                     /gene="ilvB"
                     /locus_tag="VK429_08785"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006918315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HLN91937.1"
                     /translation="MQMTGAEIFVRALADMGVDVVFGYPGGATIHIYDALFKNVKVRH
                     MLCRHEQGAVHMADGYARASGRTGVCLVTSGPGATNTVTGLATAYMDSIPIVVFTGQV
                     PTLMIGNDAFQEADIVGISRPCTKHNYLVKETKDLARIIKEAFYIASTGRPGPVLVDM
                     PKDVLIASARYDLPKDVSLRGYRPTYEGHPRQVESAVRLLLSRERPVVYAGGGVILSN
                     ASGELAELSHALSLPVTTTLMGMGAFPGSDPLSLGMLGMHGTYAANMAISSSDVILAV
                     GARFDDRVTGKISEFAPHAKIIHIDIDPTSIQKNVRVDIPIVGDLKDVLRKMIKLVKG
                     KKEATAYQGKTAAWRGQIASWAKTHPLTYKPSKGKIKPQYVVEQIHKLTKGKAIIATE
                     VGQNQMWAAQFYNYEQPRTFLSSGGLGTMGYGLPAAIGAQVAMPGRLVIDIAGDGSIQ
                     MNIQELATAVQYRIPVKVVILNNGTLGMVRQWQELFFDGNYSQTCLPRIPDFVKLAEA
                     YGAKGFRATKPEEVPDVLRKGFAADGPVLIDVITDPGEMVYPMVPAGAGLTEMLLV"
     gene            complement(3108..>3360)
                     /locus_tag="VK429_08790"
     CDS             complement(3108..>3360)
                     /locus_tag="VK429_08790"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011196807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HLN91938.1"
                     /translation="GTHGPCIGHISPEAMEGGPIALVREGDPIVLDIPKRKLSLDVPA
                     AELARRRKGWKAPAPKVAKGYLSRYAKLVRSAGEGAVVV"
BASE COUNT          504 a         1186 c         1033 g          637 t
ORIGIN      
        1 cttcatctcc gccttcgtct cgggagagac gacgcggggg ccgcgcgtga ggtcgccgta
       61 ctgcgccgtg ttgctgatcg agtaccgcat ggtggagatc ccgccctcgt agatgaggtc
      121 gacgatcagc ttgagttcgt gcacgcactc gaaatacgcc atctccgggg agtaccccgc
      181 ctcgaccagc gtttcgtacc cggcgatcac caacgccgtg gcaccgccgc acaggacggc
      241 ctgctcgccg aagaggtccg tctcggtctc ctcccggaag ttcgtctcga tgaccccggc
      301 ccgcgcggcg ccgatccctg ccgcgtaggc gagcgccacg tccttcgtga tccccgccgg
      361 gtcctggtgg acggcgatca gcgccggcac cccttccccc ttcacgtatt gggcgcggac
      421 caggtgtccg ggccccttgg gggcgaccat gaagacgttg acgtcggggc gcgccacgat
      481 ctgcccgaaa tggatgttga agccgtgcgc gaacatcagg aacgctccct tgcgcaggtt
      541 cggccccacc gacgcccggt agatcccccc ctggagttcg tcgggcagga gcatgacgac
      601 gacgtcggcc ttcttcacca tcgatgcggc gtccgcgacc tcgaaaccgg cctccttcgc
      661 cttcttctcg ttctcgccgc cggggacctc cccgacgatg acgttgaacc cgctctcctt
      721 caggttgttc gcgtgggcgt gcccctggct gccgtacccc aggatcgcga tcgtcttccc
      781 tttgagcagt tccatcttgg cgtcctgttc ccggtacatg gtgaccattc cctctccctc
      841 cgtttcttcg ttcttcgaat tccagcgtga ctcccgcggt ccctacatcc cgcgggagat
      901 ggcgatcttg ccggtccgca ctacttcgcg gatgccgagg ggccggagca tctgcaggaa
      961 ggcctgcacc ttcccctcgc cccccgtcat ctcgatcgtg tagcagcgcg gcgctacgtc
     1021 gacgatccgt gcgcggaaga tgtcgacaag ccgaagcacc tcctgcttcg cgtccccgtc
     1081 ggcgttcacc ttgacgagca ccagctcccg gtcgaccgtg tccacgcccg tgaagtcgat
     1141 caccttcagg accgggatga gcttgttcag ctgcttcagg atctgctcga tgatctggtc
     1201 gttcccggtg gtcacgatcg tcatccggga gacctgcggc tccatcgtct ccgccacgca
     1261 gagcgattcg atgttgaacc cgcgacccga gaagagcccg gagacgcggc tcaatacccc
     1321 gaactcgttc tccaccagga cggaaatcgt gtggcgcatc gctcttctct ccttccgtgt
     1381 ccgtcgggcg tcagaccagt agcatctcgg tcagccccgc tcccgcgggg accatcgggt
     1441 agaccatctc tccgggatcc gtgatcacgt cgatcagcac cggtccgtcg gcggcgaacc
     1501 ccttgcggag cacgtcgggg acctcctccg gtttcgtggc gcggaaccct ttcgccccgt
     1561 acgcctccgc cagcttcacg aagtcgggga tccgggggag acatgtctgc gaatagttcc
     1621 cgtcgaagaa gagctcctgc cactggcgga ccatcccgag cgtcccgttg ttgaggatca
     1681 cgaccttcac cggtatccgg tactgcacgg ccgtggccag ttcctggatg ttcatctgga
     1741 tgctgccgtc ccccgcgatg tcgatgacga ggcgccccgg catcgccacc tgcgcgccga
     1801 tcgccgccgg gagcccgtac cccatcgtcc ccaacccccc cgaggagagg aaggtgcgcg
     1861 gctgctcgta gttgtagaac tgggcggccc acatctggtt ctggccgacc tccgtggcga
     1921 tgatcgcctt ccccttcgtg agcttgtgga tctgctccac cacgtattgc ggcttgatct
     1981 tccccttcga cggcttgtac gtcagcgggt gggtcttcgc ccacgaggcg atctgcccgc
     2041 gccacgcggc ggtctttccc tggtacgcgg tcgcctcttt cttccccttc accagcttga
     2101 tcatcttccg caaaacgtcc ttcaaatcgc ccacgatcgg gatgtcgacc cgcacgttct
     2161 tctggatcga cgtgggatcg atgtcgatgt gaatgatctt ggcgtgcggc gcgaactcgc
     2221 tgatcttccc ggtcacgcgg tcgtcgaagc gcgcgccaac ggcaaggatc acgtccgaac
     2281 tggagatcgc catgttcgca gcgtacgtcc cgtgcatgcc cagcatcccc agcgacagcg
     2341 ggtcggagcc cgggaacgcc cccatcccca tgagcgtcgt tgtcaccggg agcgagagcg
     2401 cgtgggaaag ctccgccagt tccccggagg cgttcgacag gatcacgccg cccccggcgt
     2461 agacgaccgg gcgctcccgg gacagcagca gccgcaccgc gctttccacc tggcgcgggt
     2521 gcccttcata ggtggggcga tacccccgga ggctcacatc cttggggaga tcgtacctcg
     2581 cggaggcgat cagcacgtcc ttgggcatgt cgaccagcac cgggccggga cggcccgtgg
     2641 aggcgatgta gaacgcctcc ttgatgatac gggcgaggtc cttcgtctcc ttgacgaggt
     2701 agttgtgctt ggtgcacggc cggctgatgc cgacgatgtc cgcctcctgg aaggcgtcgt
     2761 tgccgatcat gagcgtgggg acctgccccg tgaagacgac gatcgggatc gagtccatgt
     2821 acgccgtggc gagacccgtg accgtgttcg tcgcgccggg ccccgaggtg acgaggcaca
     2881 ccccggtcct gccggacgcc cgcgcgtagc cgtcggccat gtggaccgct ccctgctcgt
     2941 ggcggcacag catgtggcgt accttcacgt tcttgaacag ggcgtcgtag atgtggatgg
     3001 tcgctccgcc ggggtagccg aagacgacgt cgacccccat gtccgcgagc gccctgacga
     3061 agatctccgc accggtcatc tgcatgggaa aagcctcctg gcgtgactca cacgaccacc
     3121 gcgccctcgc cggccgaacg gacgagcttc gcgtaccggg agaggtatcc cttcgccacc
     3181 ttcggggcgg gggccttcca ccccttccgc cgccgggcga gttccgccgc ggggacgtcc
     3241 agggaaagct tccgcttcgg gatgtcgagc acgatcggat cgccttcgcg caccagcgcg
     3301 atcgggcccc cctccatcgc ctccggggag atgtgcccga tgcatgggcc gtgcgtgccg
//
LOCUS       DATGYW010000628         1658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_93619, whole genome shotgun sequence.
ACCESSION   DATGYW010000628 DATGYW010000000
VERSION     DATGYW010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93619"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..546)
                     /gene="ricT"
                     /locus_tag="VK429_08795"
     CDS             complement(<1..546)
                     /gene="ricT"
                     /locus_tag="VK429_08795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012531637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory iron-sulfur-containing complex
                     subunit RicT"
                     /protein_id="HLN91939.1"
                     /translation="MDIAGIRLRGVCKIYHFDCTGVAVQRGDYAVVQTERGASLGAVI
                     RRIDGPARKGDKPPFGKVLRVASAEDMRAHQENTRRESEAEAFCTSRITERGLPMKLV
                     RAEYLLDRSKAVFYFTADGRIDFRELVKDLAHELRTRIEMRQIGVRDEARAVGGVGPC
                     GKELCCATFLRDFEPITVKMAK"
     gene            complement(556..1536)
                     /gene="holB"
                     /locus_tag="VK429_08800"
     CDS             complement(556..1536)
                     /gene="holB"
                     /locus_tag="VK429_08800"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HLN91940.1"
                     /translation="MVEPLSAVIGQERAVALLRRYVGAGAVPQGLLFSGEEGVGKEKT
                     ARSFAAALLCRKPGTDGACGSCPDCRLLASGAHPNFFFIAPETQFLRIDEIRALREEL
                     SLKAFSDRPRVAILCPADRMTQQAANALLKTLEEPPTGAHLILVAYRTSVLMPTIVSR
                     CQRVPFFPLTADAVAEILSRHPDVGGEHPLPVLALAAKVSGGSPGRALSLLPGLAEER
                     EAWLALFTKLSPAAAVKLAESWKGEGDTPGRLAAPLSLVRDLSLLSSGGGADIMNEDL
                     REPLASAAVHPPANGWNAAFRELLSISRMPPQPQKRLMLEAFFFGLHGKG"
BASE COUNT          259 a          579 c          573 g          247 t
ORIGIN      
        1 cttcgccatc ttgaccgtga tcggctcgaa gtcgcgcagg aaggtcgcgc agcaaagctc
       61 cttgccgcac gggccgaccc cgccgaccgc gcgcgcctcg tcgcgcaccc cgatctggcg
      121 catctcgatg cgcgtgcgaa gctcgtgggc caggtccttg accagttccc ggaagtcgat
      181 ccggccgtcc gccgtgaagt agaagaccgc cttgctccgg tcgaggaggt actcggcccg
      241 caccagtttc atcgggagcc cgcgctctgt gatgcgggaa gtgcagaacg cttccgcctc
      301 ggactcccgg cgggtgttct cctgatgggc ccgcatgtcc tccgccgagg cgacccggag
      361 gaccttgccg aaggggggtt tatcgccctt ccgtgcggga ccgtcgatcc ggcggatcac
      421 cgcgcccagc gacgctcccc gctccgtctg cacgacggcg tagtcgcccc gctgcacggc
      481 cacccccgtg cagtcgaagt ggtagatctt gcagacgcca cgaaggcgga taccggcgat
      541 gtccattccc agtcctcatc ccttcccgtg caatccgaag aaaaacgcct ccagcatcag
      601 ccgcttctgc ggctgcggag gcatgcggga gatcgacagg agctcccgga acgccgcgtt
      661 ccacccgttc gcgggagggt gtacggccgc ggacgcgagg ggctcccgca gatcctcgtt
      721 cattatatcc gctccgcccc cggaagataa gagggacaga tcccggacca gcgagagcgg
      781 ggcggccagg cgtcccgggg tgtccccctc ccccttccag ctctccgcga gtttcaccgc
      841 cgccgccggg gagagcttcg tgaagagcgc gagccacgcc tcccgctcct ccgcgagccc
      901 gggcaggagg gagagggcgc gcccggggct tcccccggag accttggcgg ccagcgcaag
      961 cacgggcagg ggatgctccc cgcccacgtc cgggtgacgg gacaggatct ccgccaccgc
     1021 atcggcggtg agagggaaga aagggactct ctggcaccgg gagacgatcg tgggcatcag
     1081 gaccgaggtc ctgtaggcga cgaggatcag gtgtgcgccg gtcggcggct cctcgagcgt
     1141 tttcagcagg gcgttggcgg cctgctgcgt catccggtcg gcggggcaga ggatcgcgac
     1201 gcgagggcgg tcggagaacg ccttgaggga aagttcctcc cgcagcgcgc ggatctcgtc
     1261 gatacggagg aactgcgttt ccggcgcgat gaaaaagaag ttggggtgtg cgccggaggc
     1321 gagcagacgg cagtcggggc acgatccgca cgccccgtcc gtcccgggtt tcctgcagag
     1381 gagggcggcg gcgaacgacc gggcggtctt ctccttcccc accccttcct cgccggagaa
     1441 gagaagcccc tgggggaccg cccccgcgcc gacgtaccgg cgcaggaggg cgacggcccg
     1501 ttcctgtcca atgaccgcgg agaggggctc taccatccga accgctgctc caccgcccgg
     1561 aggacgcttc ggaacacctc atcttccggg gcgtcggcgt cgatccgggt gatccggtcg
     1621 gggttccgcc ctgcgaggcg gaggtacccc tcgcgcac
//
LOCUS       DATGYW010000629         2683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_522876, whole genome shotgun sequence.
ACCESSION   DATGYW010000629 DATGYW010000000
VERSION     DATGYW010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_522876"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..290
                     /locus_tag="VK429_08805"
     CDS             <1..290
                     /locus_tag="VK429_08805"
                     /inference="COORDINATES: protein motif:HMM:NF033919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PA2779 family protein"
                     /protein_id="HLN91941.1"
                     /translation="HLPGTEASPEDLTKVQSFLENKIVVQKLVDYGVSPEEANSKIEA
                     MNAQDLHRLASLTDRAAAGADDGIGLLIGIAILIILVIVILKLTHKEVIIR"
     gene            complement(318..1433)
                     /locus_tag="VK429_08810"
     CDS             complement(318..1433)
                     /locus_tag="VK429_08810"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLN91942.1"
                     /translation="MRRLLAVIERDLIKFKRNPIVIAMSILMPILYLVILGNSFQGKL
                     TDLPVAVVDHDTGPYAKRVMENLRAIQAGPKTFKITNLLSEEEAVNGVKEGRFKAAFI
                     IPGDFSKRMSLQARPEVGLFLDNQDSISSETIRNLLSAALLSIRSEYVPIRDKAGEVQ
                     LRDINLYPKVDYYQSLVPGVIIMAIFLGTLTSGVFNLVMDRFLGIEESYLLTPLSKAH
                     IVSGLVISGLSITTVIAAIITVASMLLTGIPLGRGVERFFPFLAVVVLTTLCLLSLMF
                     VILGRARHPRIVGIISGFLNVILFFPSGAIYPVESFPGWLKTFAKCNPEVYAVHALKS
                     ILFKNAGMAAISGDILFLSLFTIVLMTIAILTFKRTL"
     gene            complement(1430..2437)
                     /locus_tag="VK429_08815"
     CDS             complement(1430..2437)
                     /locus_tag="VK429_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013328441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91943.1"
                     /translation="MEKGKAIVVSDITKKFGPIAAVDHVDFDVDGGEFFGFLGPNGAG
                     KTTLIRMLTTLLRPTSGKAIVSGWDVTEDPAEVRKRIGVVPQAMTSDLDLTGHENMDL
                     YGRFYGIRGRERKERIGYLLEMVGLTHRANDLVATYSGGMRRRLEIARVLVHRPPLLF
                     LDEPTIGLDPQSRRVVWDFLKKLIEGNSMTIFLTTHYMEEAEALCGRVGIIDAGKIIA
                     LGSPSALKAEIPGNDIVSLRVGNLSPELVRAIGELPFVHKAIAEEDSLRVYVDNGSKN
                     LPVLIDDVRRAGGAILSASVHEQSLEDVFIHHTGKTIREEEAKKVSFLLGAGVPQRFG
                     R"
     gene            complement(2458..>2683)
                     /locus_tag="VK429_08820"
     CDS             complement(2458..>2683)
                     /locus_tag="VK429_08820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="efflux transporter periplasmic adaptor subunit"
                     /protein_id="HLN91944.1"
                     /translation="VLNHKAFVRVEGVPGKTFEGKISEIGRYGEFATQRDVVRGREDI
                     KTFRVKVRVDDPSGVLKPGMTVDVEFPRTP"
BASE COUNT          557 a          835 c          735 g          556 t
ORIGIN      
        1 cccacctccc ggggacggaa gccagcccgg aggacctgac gaaagtccag tcgttcctcg
       61 agaacaagat cgttgtccag aagctggtcg actacggcgt atcgcccgag gaggcgaatt
      121 cgaagatcga ggcgatgaac gcgcaggacc tgcaccggct ggcctcgctg acggaccggg
      181 cagcggcggg tgcggacgac ggcatcggcc tcctcatcgg gatcgcgatc ctcatcatcc
      241 tcgtcatcgt gatcctgaag ttgacgcaca aggaagtcat cattcgctga tacccggttt
      301 cccgggtcaa tgatgattca cagggtccgc ttgaaggtca ggatcgcgat cgtcatcagg
      361 acgatggtga agagggagag aaacaggata tctcccgaga tggccgccat gccggcattc
      421 ttgaagagaa tcgatttcaa ggcatggacc gcgtagacct cggggttgca cttcgcaaac
      481 gtcttaagcc atcccgggaa gctttcaaca gggtagatcg ccccgctcgg gaaaaagaga
      541 atgacattca ggaatccgct gatgattccg acgattctcg ggtgacgggc ccgccccaga
      601 ataacgaaca tcaggctgag cagacacaag gtcgtcagga ccacgacggc aaggaaaggg
      661 aaaaaccgct ccactcctcg ccccaaagga atccccgtca acagcatgct cgccaccgtg
      721 atgatcgcgg caatcaccgt ggtgatcgaa agcccgctga tgaccaggcc actcacgata
      781 tgtgctttgg aaaggggtgt cagcagatag ctctcctcga tgccgagaaa ccggtccatc
      841 acgaggttga acacccccga cgtcaaggta ccgagaaata tcgccatgat gatgacgccc
      901 ggaacgaggg actgataata gtcgaccttg gggtaaagat tgatgtccct gagctgcact
      961 tcccctgcct tgtcccgtat cggcacatac tcggagcgta tcgatagcag cgcggcgctc
     1021 agcagattcc gtatcgtttc cgaagagatg ctgtcctgat tgtcgagaaa gaggccgacc
     1081 tcgggcctgg cctgcagcga catccttttg ctgaaatcgc cgggaatgat gaacgccgcc
     1141 ttgaatctcc cctccttgac gccgtttacg gcttcctcct cgctcagcag gttcgtaatc
     1201 ttgaaggttt tcgggcccgc ctggatggca cggagatttt ccatcacccg ctttgcataa
     1261 ggacccgtgt catggtccac cacggcgacc ggaaggtccg tcagtttccc ctggaaggaa
     1321 ttcccgagga tcacgagata gaggatcggc atcaggatgc tcatggcgat cacgatcgga
     1381 ttccgcttga atttgatcag gtcccgttcg atgaccgcca gcagccttct catcttccga
     1441 atctctgcgg gacgcccgca ccgagcagaa agctgacctt cttcgcctcc tcttcccgga
     1501 tggttttccc ggtatggtgt atgaagacat cctccaggga ctgttcatgg accgaggcgg
     1561 acaggatggc gccgcccgcc cgcctgacgt catcgatcag gaccggcaga ttcttcgaac
     1621 cattgtcgac atagaccctc agggaatcct cttctgcgat cgctttatgc acgaagggca
     1681 gctcccctat cgcgcggacg agttccgggg aaaggtttcc aaccctgagc gacacgatgt
     1741 cgttgccggg gatctccgcc ttcagggcag agggactccc cagtgcgatg atcttccccg
     1801 catcgatgat ccccaccctg ccgcataacg cttccgcctc ctccatgtaa tgggtcgtca
     1861 ggaatatcgt catggaattt ccttcgatca acttcttgag gaaatcccag acgacgcgtc
     1921 gcgattgcgg atccaggccg atcgtgggct cgtccaggaa aagcaacggc ggccggtgaa
     1981 cgagaaccct ggcgatctcg agccttctcc gcatcccccc ggaataggtg gcgacgaggt
     2041 cgttcgcccg atgcgtgagc cccaccatct ccagaagata gccgatcctt tctttccttt
     2101 cccgcccccg gatgccgtag aatctgccgt agagatccat gttctcgtgg cccgtaagat
     2161 ccaggtcgct tgtcatcgcc tggggaacca ccccgatccg ctttctcacc tcggcggggt
     2221 cttccgtgac atcccaaccg gagacgatcg ccttgccgct ggtcggccgg agcagcgttg
     2281 tgagcatccg gataagggtc gttttccctg ccccgttggg accgagaaat ccgaagaatt
     2341 cgcctccgtc cacatcgaaa tccacgtggt ccacggcggc gatggggccg aatttcttcg
     2401 taatgtcgga tacgacgatc gccttgccct tttccatctt cgaatcttcc cgtcgtctca
     2461 gggggtccgg gggaactcga cgtccaccgt catcccgggt ttcagaaccc ccgaggggtc
     2521 gtcaaccctc acctttaccc ggaatgtctt gatatcttcc ctgccccgca ccacgtccct
     2581 ctgggtcgcg aactcgccgt agcgtccgat ctccgatatc ttcccttcaa acgttttccc
     2641 gggcactcct tccaccctga cgaaagcctt gtggttcagg acc
//
LOCUS       DATGYW010000630         2829 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_47975, whole genome shotgun sequence.
ACCESSION   DATGYW010000630 DATGYW010000000
VERSION     DATGYW010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2829
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47975"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..706
                     /gene="coaE"
                     /locus_tag="VK429_08825"
     CDS             116..706
                     /gene="coaE"
                     /locus_tag="VK429_08825"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015254254.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HLN91945.1"
                     /translation="MTGNIGSGKSAVAAMLREAGIPVLDADRISREVTAPGGRAYDAV
                     VETFGRGILRDDGSIDRKRLGEIVFADPRLRGQLEAITHPAIFEAMKESISGIEREGH
                     RVVVVEATLIHESGRKGLFEAVISVTCDRETALTRLTARDGMTRSQADARLRVQMDAD
                     RKAGASDYVIDNSGSLDETRRQVVALARVLLEKEIT"
     gene            complement(699..1808)
                     /gene="ald"
                     /locus_tag="VK429_08830"
     CDS             complement(699..1808)
                     /gene="ald"
                     /locus_tag="VK429_08830"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015864797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HLN91946.1"
                     /translation="MRIGVPRETKPGENRVAITPSAVRVLRESGAEIVVETGAGAASG
                     FEDREFLDAGAAIALQASQAWSADLVVKVKEPLPPEFPFLSESSTLFTFLHLAAFPQL
                     TEELLTRRITAVAYETVTSAGALPILRPMSEVAGILSIQVGARGLEKGCGGRGVLLPG
                     TAGSPPGDVTVLGAGVAGRNAAKIAAAIGANVRILDVNPEKLDQARRYCGERVRAVRS
                     NPEAIAEALKETDLLVSTVLVAGERAPRLVTLAMVRAMRPGAVVVDIAIDQGGSAETS
                     RPTTHAAPYFIEERVVHYCVTNMPAAVPRTSTQGLVAATLPYLLSFARQGVDGALRSD
                     DGLLAGLNTHGGNVTCEGVAKAFGKPFLRAREALR"
     gene            complement(1878..2078)
                     /locus_tag="VK429_08835"
     CDS             complement(1878..2078)
                     /locus_tag="VK429_08835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011137214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HLN91947.1"
                     /translation="MAFGTVKWFNDAKGFGFITEEGGEDIFVHFSEIKGEGFRTLAEG
                     QRVEFEVTSGPKGKKAANVRKA"
     gene            2496..>2829
                     /locus_tag="VK429_08840"
     CDS             2496..>2829
                     /locus_tag="VK429_08840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonyl-CoA carboxylase/reductase"
                     /protein_id="HLN91948.1"
                     /translation="MSDPFSPNEDSWPLGFAPSLGTPLPRRMLALTIHRDQYGPPSRS
                     VRLEAVPTARLKPNEANRVLVAILATGPNFNTNFAALGLPVPVFGKGDTASVHVPGSD
                     ALGIVVDAG"
BASE COUNT          479 a          960 c          907 g          483 t
ORIGIN      
        1 taatcggctg ggctttcagc catacgggcc tttccccgtt gctttccgct tcgattggcc
       61 tgggcatcat tgggattgtc gtgctcgtat actcccgggc atgcgggtat tcggattgac
      121 ggggaacatc ggctcgggga aaagcgcggt ggccgcgatg ctgcgcgagg cggggatccc
      181 ggtcctcgac gccgaccgga tctcgaggga agtgacggcc ccgggaggac gtgcgtacga
      241 tgcggtcgtg gaaacgttcg gccgggggat cctgcgggac gacgggtcga tcgaccggaa
      301 gcgcctgggg gagatcgtct tcgccgaccc tcgattgcga gggcagttgg aggcgatcac
      361 ccaccccgcg atcttcgagg cgatgaagga atcaatctcc ggaatcgaac gggaaggaca
      421 ccgcgtggtc gttgtggagg cgaccctcat ccacgaatcg gggagaaagg ggctcttcga
      481 agcggtgatc tcggtaacgt gcgatcgtga aacggcactt acccgcctta cggcacgcga
      541 cgggatgacg cgcagtcagg ccgatgcgag gctccgcgtg cagatggacg cggatcggaa
      601 ggccggcgcc tccgactacg tgatcgacaa ctccggttcc ctcgacgaaa cccgccgcca
      661 ggtcgtcgcg ttggcacggg tgctgctgga aaaagagatt acctgagcgc ctccctcgcg
      721 cgaaggaacg gcttcccgaa cgccttcgcg accccctcgc aagtgacgtt ccctccgtgg
      781 gtgttgagcc ccgcgagaag cccgtcgtcg gatcgcaacg cgccgtcaac accctgccgc
      841 gcgaacgaca ggaggtacgg gagcgtggcc gcgacgagtc cctgcgtgga ggtgcgcggc
      901 accgcggcgg gcatgttcgt cacgcaataa tggacgacac gctcctctat aaagtagggg
      961 gcggcgtgcg tcgtcgggcg tgacgtttcg gccgaccctc cctggtcgat ggcgatatcc
     1021 accaccaccg cgcctgggcg catcgcgcgg accatcgcca gcgtgaccag gcgcggcgcc
     1081 cgctcccccg ccaccagcac ggtcgaaacg agaaggtccg tctccttcag cgcctccgcg
     1141 atcgcctcgg ggttggaacg gacggcgcga accctctctc cgcaataccg gcgtgcctgg
     1201 tccagttttt ccgggttcac gtcgaggatc ctcacattcg cgccgatcgc cgcggcgatc
     1261 ttcgcggcgt tgcgcccggc caccccggcc ccgagaacgg tcacatcccc cggcggggag
     1321 ccggccgtcc cggggagcag gacaccgcgc ccaccgcaac ccttttcgag tccccgcgct
     1381 cctacctgga tggaaaggat ccccgccacc tcgctcatcg gccggaggat cggcagcgct
     1441 ccggcggacg tcacggtctc gtacgcaacg gcggtgatgc gacgggtgag aagctcttcc
     1501 gtaagttgcg gaaacgcggc aaggtggagg aaggtgaaga gggtggaaga ttccgacaga
     1561 aatggaaact cggggggcag cggctccttg accttcacca cgaggtcggc ggaccacgcc
     1621 tgcgacgcct gcaatgcgat cgcggccccg gcatcgagga attcccggtc ctcgaacccg
     1681 ctggccgccc cggcgcccgt ctccacgacg atctcggcgc cggactcccg caggacacgg
     1741 accgccgacg gcgtaatggc gacccggttc tccccgggct tcgtctctcg cgggaccccg
     1801 atgcgcatcg tgcgtcacgc ccccgcggtg atgtgacctt tccctccccg cgatcgcggg
     1861 gagggaaagg ctatcgttca ggccttgcgg acgttcgccg cctttttccc cttcgggccg
     1921 gaggtgacct cgaactccac gcgctgcccc tcggcgaggg tccggaatcc ctctcccttg
     1981 atctcgctga agtgaacgaa gatgtcctcc ccgccctctt ccgtgatgaa cccgaacccc
     2041 ttcgcgtcgt tgaaccattt taccgtgccg aatgccatgc ctacgactcc tctgctggcc
     2101 ccgtggggcc gtccgtggat cttcgagcgt tacgccgccc cctgcgttcg gccggccggg
     2161 ggctttcccc gctccgcagc cggaagggcc ttgccgcgcc ctcccgctgt accggacacc
     2221 gaatccgctg gtgaagaaat tcgcgtgggt cgatcctgcg ggtgaccaca gcgcacgtct
     2281 caccgttttg tttctcatcg tatacgcgaa acgcgaccgg ggtcaatacg cgaaacgggc
     2341 ctcgaaaaaa tctgttacgc ggcggatttc ccggattatt gcaaaataat gtttgatcgg
     2401 tgaaatcccg gggagaaaac gcgcatcgaa gagacagcga tcggagtatg ctcagcggtc
     2461 ccgaaatccc aatcccccgc ccggaggatc acgacatgtc cgacccgttc agcccgaacg
     2521 aagattcctg gcccctcggt ttcgctccat cgctgggcac tcccctgccg cgacggatgc
     2581 tggcgctcac gatccaccgc gaccagtacg gcccgccgtc ccgttccgtt cgcctggagg
     2641 ccgtccccac cgcgcgcctg aaaccgaacg aggcgaacag ggttctcgtg gcgatcctgg
     2701 cgaccggccc aaatttcaac acgaatttcg ccgcgcttgg ccttccggtg ccggtgttcg
     2761 gaaaaggcga cacggcctcc gtgcacgtgc cgggaagcga cgcgctcggg atcgtggtgg
     2821 acgcgggtc
//
LOCUS       DATGYW010000631         1934 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_359620, whole genome shotgun sequence.
ACCESSION   DATGYW010000631 DATGYW010000000
VERSION     DATGYW010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1934)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1934)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1934
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_359620"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..733)
                     /locus_tag="VK429_08845"
     CDS             complement(<1..733)
                     /locus_tag="VK429_08845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016349713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyltransferase"
                     /protein_id="HLN91949.1"
                     /translation="MRAVVFAYHNMGIAGIRALLDSGFTIPMVLSHEDDPRENRWFGS
                     VAEFCRERGIPVFFPKDVNAPPWPERIRAASPDLLFSFYYRSMLKKEILEIPPLGAMN
                     LHGSLLPKYRGRAPVNWVLVKGETETGVTLHFMTEKPDAGDIVGQAAVPIAFDDTALT
                     LFGKMEDAASRLLADLLPRIAAGEIPRRPNDLARGSYFGGRRPEDGRIDWSRPAVEIY
                     NLVRAVTRPYPGAFAEHAGEKLTVWW"
     gene            complement(739..1662)
                     /locus_tag="VK429_08850"
     CDS             complement(739..1662)
                     /locus_tag="VK429_08850"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005035801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HLN91950.1"
                     /translation="MISVVVPVYNEELNLPLLMDRLESALRTSGESYEIIYVDDGSRD
                     NSLEVLKGFVGRPGVRVLELTRNYGQHSAIISGFSIVRGDVVVTMDADLQNPPEEIPA
                     IVRTMREGNFEVVGTVREMRKDSLFRKIPSRIVNAMTRRITGIRMSDWGCMLRAYRRE
                     VVDRMVESQEYSTFIPALATLFAKRMTEIPVGHAERHAGASNYNLWKLLNLQFDLLTS
                     FSEFPLRVLLYMGTGMAFLGVAFGVLLVVVRIFYGAAWAGNGIFTLFAVLFFFVGALF
                     FALGIMGQYIGRIYHEVRKRPRFTIRKLHEG"
     gene            complement(1659..>1934)
                     /locus_tag="VK429_08855"
     CDS             complement(1659..>1934)
                     /locus_tag="VK429_08855"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HLN91951.1"
                     /translation="WHLFIVKVTGVDRDAFIGALAERNVGVGLHFPPCHLLSYVRERF
                     GSREGDLPDTERAGRRIVSLPLFPGMIDGDVEYVCEAVREILAGVAG"
BASE COUNT          338 a          670 c          622 g          304 t
ORIGIN      
        1 cccaccacac ggtgagtttt tccccggcgt gttccgcgaa cgcccccggg taagggcggg
       61 tgaccgcgcg gacgaggttg tagatctcca ccgccgggcg ggaccagtcg atccgcccgt
      121 cctccggcct gcgcccgccg aagtagctcc cgcgggcgag gtcgttcggg cgccgcggga
      181 tctccccggc cgcgatcctg ggcagcaggt cggcgagaag cctcgaagcc gcatcctcca
      241 tcttcccgaa cagcgtgagc gccgtgtcgt cgaaggcgat cggcaccgcc gcctggccca
      301 cgatatcgcc cgcgtcgggc ttctccgtca tgaagtggag ggtcaccccg gtttccgtct
      361 cccccttcac gagcacccag ttgaccggcg cccgtccccg gtacttcggc agcagcgagc
      421 cgtggaggtt catcgccccc agcgggggga tctcgaggat ctcctttttc agcatcgacc
      481 ggtagtagaa ggagaagagc aggtcgggcg aagccgcgcg gatccgttcc ggccacggcg
      541 gcgcgttgac gtccttcggg aagaacaccg ggatcccccg ctcccggcag aactccgcca
      601 cggaaccgaa ccaccggttc tccctcgggt cgtcctcgtg ggacaggacc atcgggatcg
      661 tgaagccgct gtcgaggagg gcgcggatcc cggcgattcc catgttgtga tacgcgaaga
      721 cgaccgcccg catcgcactt agccttcgtg aagtttccgg atcgtgaagc gcgggcgctt
      781 ccggacctcg tggtagatcc ggccgatgta ctgccccatg atcccgaggg cgaagaagag
      841 agcccccacg aagaagaaca ggacggcgaa gagggtgaag atgccgttcc ccgcccacgc
      901 ggccccgtag aagatccgca ccacgaccag cagcacgccg aaggcgactc cgagaaacgc
      961 catccccgtc cccatgtaga ggagcacgcg cagggggaac tcggagaacg aggtaagcag
     1021 gtcgaactgg aggttcagga gcttccacag gttgtagttt gaggcccccg cgtgccgctc
     1081 cgcgtgcccg acggggatct ccgtcatccg cttggcgaac agggtcgcca gtgcggggat
     1141 gaacgtggag tactcctggc tctccaccat gcggtccacc acctcgcgcc ggtacgcccg
     1201 cagcatgcat ccccagtcgc tcatgcggat cccggtgatc cgccgggtca tcgcgttcac
     1261 gatccgggag gggatcttcc ggaagaggga gtctttccgc atctcccgga ccgttccaac
     1321 gacctcgaag ttcccctccc gcatcgtgcg gacgatggcg ggaatctcct cgggcgggtt
     1381 ctgcaggtcg gcgtccatcg tcacgacaac gtccccccgg acgatggaga accccgagat
     1441 gatcgccgag tgctgtccgt agttccgcgt gagctcgagg acccggacgc cggggcggcc
     1501 gacgaatcct ttcagcacct cgagggagtt gtcccggctg ccgtcgtcga cgtagatgat
     1561 ctcgtacgac tcccccgacg tccgcaaggc cgactcgagc cggtccatca gcagggggag
     1621 gttcagttcc tcgttgtaga ccgggacgac gacggagatc atcccgcgac ccccgcgagg
     1681 atttcccgca cggcctcgca gacgtactcc acgtccccat cgatcatgcc ggggaacaga
     1741 gggagcgaaa cgatccgccg acccgcccgc tcggtgtccg gcaggtcgcc ctcccgcgat
     1801 ccgaaccgtt cccgcacgta cgacaggagg tggcacggtg gaaagtggag ccccacgccg
     1861 acgttgcgtt cggcgagggc gccgatgaag gcgtcccggt ccactcccgt caccttcacg
     1921 atgaacaggt gcca
//
LOCUS       DATGYW010000632         1564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_523391, whole genome shotgun sequence.
ACCESSION   DATGYW010000632 DATGYW010000000
VERSION     DATGYW010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_523391"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1534
                     /gene="infB"
                     /locus_tag="VK429_08860"
     CDS             <1..1534
                     /gene="infB"
                     /locus_tag="VK429_08860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012546130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HLN91952.1"
                     /translation="EEVKPEDKTGRAPVVTVMGHVDHGKTTLLDAIRESNVTGSEAGG
                     ITQHIGAYEVEHNGRRVVFLDTPGHEAFTSMRARGASVTDIVILVVGADDGVMPQTVE
                     SIDHAKAAGVPIVVAVNKIDKPGSQPDRIRQQLSDHGLNPEEWGGQTLYANVSAKKKI
                     GINELLEIVLLQADVLDLKGNPTKLARGTVIESRLEKGRGPVATVLVADGTLKVGDAI
                     VTGIHYGRVRSLLNHKGKRLDEAPPGTPVEIQGLSGLPDAGQKFAVLKDERTARQIAL
                     YRGEKERERAVVRPRMSLEDLHKQIDEGLVKELNIVLKSDVQGSMEALRFSLDKLADA
                     KVKVVVIHSGVGGISESDVMLASASSAVIIGFNVRPEPKAAVIAEREGVDIRLYSVIY
                     DVVDDVKKAMEGLLEPTLKEIVLGRAEVRNMFHISRIGTIAGCSVLSGKISRGANIRL
                     LRDSVVVYEGKLSSLKRFKDDVKEVAEGYECGLGIDGYNDLHVGDQIEAFMIEKIAGT
                     LA"
BASE COUNT          299 a          484 c          548 g          233 t
ORIGIN      
        1 ggaagaggtg aagccggaag acaagaccgg ccgcgcgccg gtcgtcaccg tcatgggcca
       61 cgtggatcac ggcaagacga cgctgctcga cgccatacgg gagagcaacg tgaccggctc
      121 cgaggcgggc gggatcaccc agcacatcgg ggcctatgaa gtggagcata acggccgacg
      181 ggtggtattc ctcgacacgc cgggccacga ggcgttcacc tcgatgcgcg cccggggcgc
      241 ctccgtgacc gacatcgtca tcctcgtggt cggggcggac gacggcgtga tgccgcaaac
      301 ggtggagtcg atcgaccacg ccaaggcggc gggtgtgccg atcgtcgtcg cggtgaacaa
      361 gatcgacaag ccggggtccc agcccgaccg gatccgtcag cagctctccg accacggcct
      421 gaaccccgag gagtggggcg gacagacgct ctacgcgaat gtctccgcga agaagaagat
      481 cgggatcaac gagctcctcg aaatcgtcct cctgcaggcg gacgtcctcg acctcaaggg
      541 gaatccgacg aagctcgccc gcggcacggt catcgaatcg cggctggaga aggggcgcgg
      601 ccccgtcgct accgtcctgg tggcggacgg aacgctgaag gtgggtgacg ccatcgtcac
      661 ggggatccac tacgggcgcg tccgctcact gttgaaccac aaggggaagc ggctcgacga
      721 ggctcctccc gggacccccg tcgagatcca gggcctgtcc ggcctgccgg atgccggcca
      781 gaagtttgcc gtgctgaagg atgagcgcac ggcccggcag atcgccctct accggggcga
      841 gaaggagcgg gagcgtgccg tggtgcgtcc acggatgagc ctcgaggatc tccacaagca
      901 gatcgacgag gggctggtga aggaactgaa catcgtgctc aagtccgacg tccaggggtc
      961 gatggaggcg ctccggttct ccctcgacaa gctggccgac gcgaaggtca aggtcgtcgt
     1021 catccactcc ggcgtcggag ggatctccga gtcggacgtg atgctcgcct ccgcttcctc
     1081 cgccgtgatc atcggattca acgtccggcc cgaaccgaag gcggccgtga tcgcggaacg
     1141 cgagggggtc gacatccggc tctactccgt catctacgac gtggtggacg acgtgaaaaa
     1201 ggcgatggag ggcctcctcg agcccaccct caaggagatc gtcctgggcc gggcggaggt
     1261 gcgcaacatg ttccacatct ccaggatcgg cacgatcgcc ggctgcagtg tcctgtcggg
     1321 aaagatctcc cggggcgcga acatccgcct ccttagggac agcgttgtcg tgtacgaagg
     1381 gaagctctcc tccctgaagc gcttcaagga cgacgtcaag gaggtcgcgg aggggtacga
     1441 gtgcggactg gggatcgacg ggtacaacga cctccatgtg ggcgaccaga tcgaggcgtt
     1501 catgatcgag aagatcgccg gcacgctggc gtgatcccgg gcgggggaat ccgttgctgg
     1561 tggc
//
LOCUS       DATGYW010000633         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_151551, whole genome shotgun sequence.
ACCESSION   DATGYW010000633 DATGYW010000000
VERSION     DATGYW010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151551"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..>1618)
                     /locus_tag="VK429_08865"
     CDS             complement(63..>1618)
                     /locus_tag="VK429_08865"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011697180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HLN91953.1"
                     /translation="DTTLRDGEQVPGAKLARDQKVEIARQLAVLNVDIIEAGFQASSP
                     GDFESVQAVAKTVKGPVITGLARAVKKDIDTLWDAVKVAKRPRIHTFLGTSDIHIQKK
                     FRADREKILQWCVDTVKYARSLCRDVEFSTEDASRTDFEYLCRTVDAIVKAGATTINI
                     PDTVGYATPMEMADRVRRLKEKVPGLDHAILSMHCHDDLGMSTANTLAGILAGARQAE
                     VTVNGIGERAGNASLEEVVLAIKTRKDIFGGLTTDVNTKEIAKTSRMVSKLMGLPIQR
                     NKAIVGTNAFAHSSGIHQDGIIKDRSTYEIIRPEDVGVTAHTFALTARSGRAALKHHI
                     SGMGHHLTDAQLAEIYEKFLVLADKKKEVMVEDLEILVQDELFKVPETYKLVHLQILS
                     GTRATPMAALKVQRNNEVIEEAATGNGPIDAAYKCIERIVGTKFKLIDFGLNAVTSGQ
                     DAIGEARVRIRSNGTIFSGGASSTDIIEAAIKAYLSAINRWVAAEAKTKAGKKGAAKK
                     TPMPPTAVP"
BASE COUNT          212 a          578 c          509 g          319 t
ORIGIN      
        1 gcccgggggg gcggtggcgc tggacgcctt ctcgcccccc cgggaggagt accgctaatc
       61 ctctaaggca ccgcggtcgg cggcatcggc gtcttcttcg cggcgccctt cttcccggcc
      121 ttcgtcttcg cctccgcggc cacccaccgg ttgatcgcgg agaggtacgc cttgatcgcc
      181 gcctcgatga tgtcggtcga gctcgcgccg ccggagaaga tcgtcccgtt ggagcggatc
      241 cgcacccgcg cctccccgat cgcgtcctgc cccgacgtga ccgcgttcag gccgaaatcg
      301 atcagcttga atttcgtccc gacgatccgt tcgatgcact tgtacgcggc gtcgatcggc
      361 ccgttccccg tcgccgcctc ctcgatcacc tcgttgttcc gctgcacctt cagcgccgcc
      421 atcggggtcg cccgggtccc cgacaggatc tggaggtgga ccagcttgta cgtctccggg
      481 accttgaaca gctcgtcctg cacgaggatc tcgaggtcct cgaccatgac ctccttcttc
      541 ttgtcggcca ggacgaggaa cttctcgtag atctccgcca gctgggcgtc ggtcaggtgg
      601 tgccccatcc cggagatgtg gtgcttgagc gccgcgcggc ccgagcgggc ggtgagggcg
      661 aacgtgtgcg ccgtcacccc cacgtcctcc ggccggatga tctcgtacgt ggagcggtcc
      721 ttgatgatcc cgtcctggtg gatccccgag gaatgggcga aggcgttcgt cccgacgatc
      781 gccttgttcc gctggatcgg cagccccatc agcttggaca ccatccggct cgttttcgcg
      841 atctccttcg tgttcacgtc ggtggtcagg ccgccgaaga tgtccttgcg ggtcttgatc
      901 gcgagcacca cctcctcgag cgacgcgttc cccgcgcgct cgccgatccc gttcaccgtc
      961 acctctgcct ggcgggcgcc ggcgaggatt cccgcgagcg tgttcgccgt ggacatcccg
     1021 aggtcgtcgt ggcaatgcat cgagaggatc gcgtggtcca gccccgggac cttctccttg
     1081 aggcgccgca cccggtccgc catctccatc ggcgtggcgt acccgacggt gtcggggatg
     1141 ttgatcgtcg tcgcgcccgc cttcacgatc gcgtcgacgg tccggcagag gtactcgaag
     1201 tcggtccgcg aggcgtcctc ggtcgagaac tcgacgtccc ggcagaggga gcgggcgtac
     1261 ttcaccgtgt cgacgcacca ctgcaggatc ttctcccggt cggcgcggaa cttcttctgg
     1321 atatggatgt ccgaggtgcc gaggaacgtg tggatccggg ggcgcttcgc caccttcacc
     1381 gcgtcccaca gcgtatcgat gtcctttttc accgcacgcg cgaggccggt gatgaccggc
     1441 cccttgacgg ttttcgcgac cgcctggacc gactcgaagt cgccgggcga ggaggcctgg
     1501 aaccccgcct cgatgatgtc cacgttcagc accgccagct gccgcgcgat ctcgaccttc
     1561 tggtccctgg cgagcttcgc ccccggaacc tgctccccgt cccgcaacgt cgtgtcga
//
LOCUS       DATGYW010000634         1682 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_151859, whole genome shotgun sequence.
ACCESSION   DATGYW010000634 DATGYW010000000
VERSION     DATGYW010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151859"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..231
                     /locus_tag="VK429_08870"
     CDS             <1..231
                     /locus_tag="VK429_08870"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015337398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrmO family methyltransferase"
                     /protein_id="HLN91954.1"
                     /translation="MHGADRGRLKVHPRDQENLPERGVFSTRSPHRPNPVSLHTVTLL
                     SIDGNVLRVRGMDAIDGTPVVDIKNHSPELDG"
     gene            complement(259..1278)
                     /locus_tag="VK429_08875"
     CDS             complement(259..1278)
                     /locus_tag="VK429_08875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013823282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLN91955.1"
                     /translation="MRRHFPFSALVGQELLKKGLLVNAVDPSIGGVLLRGEKGTGKTT
                     AVRSFAAVLPPKEVVSGCRFGCVRGTLLCDECRAREDSGEVLRYESRAVEVVDLALNA
                     SEDRVVGSLDLEAALREGSRKFEMGVLGKANGNVLYIDEVNLLDDHVVDVLLDVAVSG
                     VNVVMREGVSYRHPSRFLLVGTMNPEEGELRPQLLDRFGLCVEISGERDVGFRKSIVE
                     RVLLFEGEDAGFQEKWNRKDEELRARLVSARAVLPRVEVPEEILESIVAVVAELGVAG
                     HRGDITVLKASKALAAIKGILSPDQECLSDAFRLALPHRLKEDPFEETASGRKRLDAV
                     LARFG"
     gene            complement(1275..>1682)
                     /locus_tag="VK429_08880"
     CDS             complement(1275..>1682)
                     /locus_tag="VK429_08880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91956.1"
                     /translation="GEGEPVEEKKITIARREIEERYGPIGDGKKILFVNGVPMGLSTL
                     SRRLALQYSDLVPIDAGELGDGTFWLRIYDNEQRKVVVVEFDREYAFTGERGADIMDW
                     LGDDYFRIRWRAFCPAGGEEWLGADGSRGKGGK"
BASE COUNT          296 a          680 c          444 g          262 t
ORIGIN      
        1 atgcacggcg ccgaccgggg gcgcttgaag gtccatcccc gggaccagga gaacctgccg
       61 gagcgcggtg tcttctcgac ccgctcgccc caccggccca accccgtttc gctgcacacc
      121 gttacgctgc tctcgatcga tgggaacgtg ctgcgcgtcc gcgggatgga cgcgatcgac
      181 gggaccccgg tggtggacat caagaaccac tctccggaac tggacgggta atccctccgc
      241 aaaggaagag gggatgaatt acccgaaccg ggccagcacc gcgtcgaggc gctttcgccc
      301 ggatgccgtc tcctcgaacg gatcttcctt caaccggtgc ggtaaggcca gccggaaggc
      361 gtcggagagg cactcctggt cgggcgacag gatccccttg atcgccgcca gcgccttgga
      421 cgccttcagc accgtgatgt ccccgcgatg cccggccacg ccgagctccg cgaccacggc
      481 gacgatcgat tcgaggatct cctcgggaac ctcgacgcgg ggaaggaccg cccgggccga
      541 caccagccgc gcccgcagtt cctcgtcctt gcggttccac ttctcctgga accccgcgtc
      601 ctccccctcg aacagcagaa cacgctccac gatcgacttc cggaacccga cgtcacgctc
      661 ccccgagatc tccacgcaca gcccgaaccg gtccagcagc tgcggtcgca actccccttc
      721 ctccgggttc atcgtcccca ccagcagaaa ccgcgacggg tgacggtagc tcacaccctc
      781 ccgcatcacc acgttcaccc ctgacaccgc cacgtccagg aggacgtcca ccacgtgatc
      841 gtcaagaagg ttcacttcgt cgatgtacag cacgttcccg ttcgccttcc ccaacactcc
      901 catctcgaac ttccggctcc cctcccgcag cgccgcctcc aggtccaggc tccccaccac
      961 acggtcctcc gacgcgttca gcgcgaggtc cacaacctcc accgcacggg actcgtaccg
     1021 cagaacctcc ccggaatcct cccgcgcccg gcactcgtcg cacagcaacg tcccgcgaac
     1081 gcacccgaac cggcaacccg acaccacctc cttcggtgga aggaccgccg cgaacgaccg
     1141 caccgccgtc gtcttccccg ttcccttctc cccacgcaga agcacgccgc cgatcgaggg
     1201 gtccaccgcg ttcacaagga gacccttctt caacaactcc tgccccacga gggcgctgaa
     1261 gggaaaatgc cgcctcattt tccgcccttt ccccggctcc cgtcggcgcc cagccactcc
     1321 tcgccgcccg ccgggcagaa ggcgcgccac cggatgcgga agtagtcgtc cccgagccag
     1381 tccatgatgt ccgctccccg ctcccccgtg aacgcgtact cccggtcgaa ctcgaccacc
     1441 accaccttcc gctgctcgtt gtcgtagatc ctgagccaga aggtcccgtc cccaagctcc
     1501 cccgcgtcga tagggacgag gtcggaatat tggagcgcca gacgccggga caaggtggac
     1561 aaccccatcg gcacgccgtt gacgaaaagg atcttcttcc cgtcgccgat cggcccgtac
     1621 cgttcctcga tctcccggcg ggcgatcgtg atcttcttct cctccacggg ctccccctcc
     1681 cc
//
LOCUS       DATGYW010000635         1770 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_360130, whole genome shotgun sequence.
ACCESSION   DATGYW010000635 DATGYW010000000
VERSION     DATGYW010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360130"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="VK429_08885"
     CDS             complement(<1..570)
                     /locus_tag="VK429_08885"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLN91957.1"
                     /translation="MPGQDIAFLDRLLDSITSGVIAIDREGTIRVFNEAAARLLGVEK
                     GKALGKSLLSIVPNSGLVNVLRTGEAETGRPQPVGARTVIANRAPMFRDGGLIGAVSV
                     FQDVTEMEKMSRELDSTRALVRTLEEVLSGAGEWMVVVDSNGIVTMISEEYAEFNGTT
                     VADAVGKHATQVIENTRMHVVAKTGVAEIG"
     gene            complement(646..1641)
                     /locus_tag="VK429_08890"
     CDS             complement(646..1641)
                     /locus_tag="VK429_08890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013624713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005488 - binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0042918 - alkanesulfonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HLN91958.1"
                     /translation="MKRMNGLAAGLVLVGAIAGGFTGCERSQGNGAPRTGAREVRIAL
                     QPIPHFAPLYVAKEKGWLQEEFLRQGAIVKWSSFLAGPPMNESFASGEQDIGLMGDAP
                     AIIGRAAGIDTRIIGRTSSGPTALAVVVGKHSPISSPRGLRGKKVATVKGSYAHHLLT
                     IVLRNSGMTTDDIRFLNMSQGDIAKALEQGDIDAAAVWEPLITRLSDQGTARVLVDGT
                     GLKKGILVMVATKAFLDRDPGLVRKFLEVYERGREYIRANPRQAALLLSGDVKLPPGQ
                     LERVLARFDFDPRLSDDDIEELKSSEEFMSAARIIKERVDIATFLSPVPLDPSGF"
BASE COUNT          291 a          617 c          540 g          322 t
ORIGIN      
        1 gccgatctcc gccacgccgg tcttcgcgac gacgtgcata cgggtgttct cgatcacctg
       61 cgtcgcatgc ttccccacgg cgtcggcgac cgtggtcccg ttgaactccg cgtactcctc
      121 gctgatcatc gtgacgatcc cgttggaatc cacgaccacc atccactccc cggcgccgga
      181 gagcacctcc tcgagcgtcc ggaccagggc ccgcgtggaa tcgagttccc gcgacatctt
      241 ctccatctcg gtcacgtcct ggaagacgga cacggcgccg atcagccccc cgtcccggaa
      301 catcggggca cggttcgcga tgacggtccg ggcgccgacc ggctggggtc gtcccgtctc
      361 cgcctccccc gtccgcagga cgttcaccaa accggaattc gggacgatgg agaggaggct
      421 cttcccgagg gcctttccct tctcgacgcc gagaaggcgc gcggccgcct cgttgaacac
      481 ccggatcgtc ccttcgcggt cgatggcgat cacgccgctg gtgatcgagt cgagaagccg
      541 gtctaggaac gcgatgtctt gcccaggcat ccggaccccc tcccgtcagg atgacctatt
      601 ctacgccaat cgttcggggc cgcgctgcgg gaggaaggcc cgtccttaaa aaccggaggg
      661 gtcgagaggg accggggaga ggaaggtcgc gatatccacc cgctccttga tgatgcgggc
      721 ggcactcatg aattcctcgc tcgatttcaa ctcctcgatg tcgtcgtcgg aaaggcgggg
      781 atcgaaatcg aacctggcca gcaccctctc caattgcccc gggggaagtt tcacatcacc
      841 ggaaaggaga agcgccgcct gccggggatt cgcacggata tactcccgcc cccgctcgta
      901 gacctcgagg aacttgcgga cgaggcccgg gtcccggtcg aggaaggcct tcgtggccac
      961 catgacgaga atccccttct tgaggcccgt cccgtcgacc agcacccgcg ccgtcccctg
     1021 gtcggaaagc ctcgtgatca acggctccca gacggccgcg gcgtcgatgt ctccctgttc
     1081 cagcgccttc gcgatgtcgc cctgcgacat gttcaggaac cggatgtcgt cggtggtcat
     1141 tccgctgttc cgcaatacga tcgtcaggag atggtgggcg taggacccct tgaccgtcgc
     1201 cacctttttt cccctcaggc ccctcggtga cgagatcgga gagtgcttcc ccacgacgac
     1261 ggccagcgcc gtgggaccgg aggaggtccg cccgatgatg cgcgtatcga tccccgcggc
     1321 cctgccgatg atggcggggg cgtcgcccat caggccgatg tcctgttcgc cggaggcgaa
     1381 cgattcgttc atggggggac cggccaggaa agagctccac ttcacgatcg ccccctgtct
     1441 cagaaattcc tcctgcagcc agcccttctc cttggccacg tacagcgggg cgaaatgcgg
     1501 tatgggctgc aatgcgatcc ggacctccct tgccccggtc cggggggcgc cgttcccttg
     1561 ggatcgttcg cagccggtga atcccccggc gatcgctccc acgaggacca atcccgcggc
     1621 cagtccgttc attcttttca tggctctcct cctcccccgg tcggacggca tgagaacggg
     1681 gccggcattt cgccctgccc ttccaacctg gcacgccggg ggtgacggat tgcgtacaga
     1741 tgagaagttc cccgcaggat gtcgaggaat
//
LOCUS       DATGYW010000636         2408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_360197, whole genome shotgun sequence.
ACCESSION   DATGYW010000636 DATGYW010000000
VERSION     DATGYW010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360197"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            394..840
                     /locus_tag="VK429_08895"
     CDS             394..840
                     /locus_tag="VK429_08895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014959036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HLN91959.1"
                     /translation="MYSVGDSAEFTKVFSEEDVFLFAGITGDRNPVHTSKEFAEGTRF
                     KKRIAHGLLTAGTISAAIGMKLPGPGCLYLSQTLEFKAPVFLGDEITARVEIVEVISN
                     KRLRMKTRCFNQDKVLVIDGEAIIVPPRQGGEAIRTNKSKGEGGTE"
     gene            837..2048
                     /locus_tag="VK429_08900"
     CDS             837..2048
                     /locus_tag="VK429_08900"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN91960.1"
                     /translation="MRKTAIAVAALLALATAASAADTIKLGGMLPLSGRASDLGITCK
                     QGAELAVKEINAKGGVLGKKFELLMADSKANVQELVSLSKRYIQKDKVNFLFGVVSSG
                     GSLAVAEVAKQEKVIFMDTVGSTDTLTKEKWNRYTFRAGTCNSQEANSLALYTAQKYP
                     KLTKFYNIGPDYEYGRTMWDLFKAKTKEANPKAEFIGEQWPKLFTPDYTSYINAILQA
                     KPDAVYCSLWGGDLVAFIKQAKPYGVFDKMKWIIATGGDITVAQALGKEMPTGMIVDQ
                     RYYFHWPNSKRNQEFVKAYKADYKDYPSAWAAEGYDGVYFLAEAIRKAGSLDTDKVIA
                     ALEGLTIDAPRGKATLRKEDHQLSSDFMVGETVFDKAYPFAIVGKTEVFPADKVLYSI
                     DEWRKAQEGNK"
     gene            2123..>2408
                     /locus_tag="VK429_08905"
     CDS             2123..>2408
                     /locus_tag="VK429_08905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014183280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLN91961.1"
                     /translation="MDLSFLTVQVLSALRQAAFLFLISSGLTLIFGVLNILNFAHGAL
                     YMLGAYFVYALTLHLTGPAGFLIALLAAPLGVAIIAVVIETGLLRRIYVQE"
BASE COUNT          504 a          707 c          770 g          427 t
ORIGIN      
        1 tgcggcggtc ggggggaacc ggacgaaggc ggcggagctc ctgcggatcc accgcgtcaa
       61 gctgcacgag aagataaagc ggtacgggat cgccggcccg tctgtgccga agaagtaact
      121 ttttcggtac gtgttaccat aaaggtacat actgccgtag gtcttcttca ggccaacgga
      181 aatcgggcct gcccgcgatt cctggagcga taagtacctt tataggtaca ccttggggac
      241 aattgggata cttcggctgt atttgaaaaa acgtttatat tcgattcctt ccatccgtaa
      301 aacctgtgac gtccctcccg gtttttcttg gcatcacgat tgcagaacac tgtttgttgg
      361 cgtgcctttc cataccagtt cgaggagccc ccgatgtaca gcgtgggaga ttcggcagag
      421 ttcacgaaag tcttctccga ggaggacgtc ttcctcttcg caggaatcac gggggaccgc
      481 aatcccgtcc acacctcgaa ggagttcgca gagggaacac gcttcaagaa gcggatcgcg
      541 cacggtctcc tcacggcggg gacgatctcc gcggcgatcg ggatgaagct cccggggccg
      601 gggtgcctct acctgtcgca gaccctcgag ttcaaggcgc ccgtcttcct gggcgatgag
      661 atcacggcgc gcgtggagat cgtggaggtg atctccaata aacggcttcg aatgaaaaca
      721 cggtgcttca accaggacaa ggtcctggtg atcgacggcg aggcgatcat cgtccctccc
      781 cggcaggggg gggaagcgat tcgtaccaac aaatcgaagg gggaaggggg aacggaatga
      841 ggaagacggc aattgcagtg gcggcactgt tggcgttggc gacggcggca tcggcggcgg
      901 acacgatcaa gctggggggg atgctcccgc tgtccgggcg cgcctcggac ctcgggatca
      961 cgtgcaagca gggagccgag ctcgcggtca aggagatcaa cgcgaagggc ggcgtcctcg
     1021 ggaagaagtt cgagctgctg atggccgact ccaaggcgaa cgtccaggag ctcgtttccc
     1081 tgtccaagcg gtacatccag aaggacaagg tgaacttcct gttcggcgtg gtgagctcgg
     1141 gtggatccct cgcggtggcc gaggtcgcca agcaggagaa ggtgatcttc atggacaccg
     1201 tgggctccac cgacaccctg accaaggaga agtggaaccg gtacacgttc cgggcgggga
     1261 cctgcaactc gcaggaagcc aactcgctgg ccctctacac ggcgcagaag tacccgaagc
     1321 tgacgaagtt ctacaacatc ggcccggact acgagtacgg acggacgatg tgggacctct
     1381 tcaaggcgaa gacgaaggaa gcgaacccga aggcggagtt catcggggag cagtggccca
     1441 agctcttcac tccggattac acctcctaca tcaacgccat cctccaggcg aagcccgacg
     1501 ccgtgtactg ctccctctgg ggcggcgacc tggtcgcctt catcaagcag gcgaagccgt
     1561 acggcgtgtt cgacaagatg aagtggatca tcgcgaccgg gggggacatc accgtcgccc
     1621 aggcgctcgg caaggagatg cccaccggga tgatcgtcga ccagcggtac tacttccact
     1681 ggccgaacag caaacggaac caggaattcg tgaaggcgta caaggccgac tacaaggact
     1741 acccgagcgc ctgggcggcc gaagggtatg acggcgtcta cttcctcgcc gaggcgatca
     1801 ggaaggccgg ttcgctcgac accgacaagg tcatcgcggc cctcgaaggg ctgacgatcg
     1861 acgccccccg cgggaaggcg acgctgcgga aggaagatca ccaactctcc agcgacttca
     1921 tggtcggtga aaccgtgttc gacaaggcgt acccgttcgc catcgtcggg aagaccgagg
     1981 tcttcccggc cgacaaggtc ctctactcga tcgacgagtg gaggaaagcg caggaaggga
     2041 acaagtaatc atccgcaaaa cgctcgttcc cggggggcct gccgtggagg caggcccccc
     2101 caaataaccg tcggcggagt ccatggacct ctccttcctg accgtacagg tgttgagcgc
     2161 cctccggcag gcggcgttcc tcttcctcat ctcctcgggg ctcacgctca tcttcggcgt
     2221 gctgaacatc ctcaacttcg cacacggagc gctctatatg ctcggggcgt acttcgtcta
     2281 cgccctgacg ctgcacctga ccggcccggc gggatttctg atcgcgcttc tggcggcgcc
     2341 gctgggggtg gcgatcatcg cggtggtgat cgagacgggg cttttgcgcc ggatctatgt
     2401 gcaggaag
//
LOCUS       DATGYW010000637         2521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_203273, whole genome shotgun sequence.
ACCESSION   DATGYW010000637 DATGYW010000000
VERSION     DATGYW010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203273"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(38..1042)
                     /locus_tag="VK429_08910"
     CDS             complement(38..1042)
                     /locus_tag="VK429_08910"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLN91962.1"
                     /translation="MKYLILGCGPAGIAAAKVIRGKDKKGEIVIATEELGPPYLRPLL
                     TDLIMGKGDVAGIADPQSKDLAEQGIHVRHGIKAEKINSAGNRVIFANGAEEAYDVLL
                     VATGGKPEIPPALRKEHPAILPFDSLEDTLRIAERIPRSGTVAVYGPGFLAIVASSAL
                     RKRGNDVVWFQPDLPRPGYPISGELEANIHDSVRNTGVRILDGQDIATVREAGGGIEI
                     ESTEKGERVRCLAVVVATERLPAIGFLSGSGVKIGIGIVVDDYFRTSVPNIYAAGDCA
                     ELFDKETRAARINFGWRSAIKQGRLAGENMAGGGKRYIPEESDYFWALFGPALLDRIG
                     "
     gene            complement(1283..2023)
                     /locus_tag="VK429_08915"
     CDS             complement(1283..2023)
                     /locus_tag="VK429_08915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HLN91963.1"
                     /translation="MEILLDPRLWASLLTLTVLEIILGIDNLIFISLVSNRLPAFQQS
                     RARRTGLGLAVITRLLLLAGMAWLVGLTRPLFAVFGHSVSLRDVILAAGGLFLLAKGT
                     VEIHATVEGVEEEIRQSRVSGFWAAIAQILVLDVVFSLDSVITAIGMAQHFPVMAAAI
                     IIAIAIMLLASESLSRFVNAHISVKLLALSFLILVGMALIADGIGFHIPRGYLYFAIA
                     FSAFVEFLNLQAAKRRRKKASLPMQAAH"
     gene            complement(2107..2355)
                     /locus_tag="VK429_08920"
     CDS             complement(2107..2355)
                     /locus_tag="VK429_08920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009800361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91964.1"
                     /translation="MPEPTKEELLARIAELEKRTEAKKSGKLEFKVGEKGGVSVYGLG
                     RFPVTLYYEQWLRLLDIAGDLRAFLEGNKSRLKRKNET"
BASE COUNT          477 a          834 c          732 g          478 t
ORIGIN      
        1 ggaatccctg gaggtcctcc gccggggaca ccgggtccta cccgatgcgg tccagaagag
       61 ccgggccgaa cagggcccag aagtagtccg actcctccgg gatgtaccgc ttcccgcctc
      121 ccgccatgtt ctccccggca aggcgcccct gcttgatggc gcttctccac ccaaagttga
      181 tccgggcggc ccgggtctcc ttgtcgaaca gctcggcgca gtcgcccgcg gcgtaaatgt
      241 tcggaacgct ggtccggaaa tagtcgtcca cgacgatccc tatgccgatc ttcacgccgc
      301 tgccggaaag aaagccgatc gccgggagac gttcggtggc caccacgacg gcgaggcagc
      361 ggaccctctc tcctttttcg gtggattcga tctcgattcc ccccccggct tcccgcacgg
      421 tggcaatgtc ctgcccgtcg aggattcgca cccccgtgtt tcggaccgaa tcgtggatgt
      481 tcgcctcgag ttcacccgag atcggatagc ccggtcgggg caggtcgggc tggaaccaga
      541 ccacatcgtt tcccctcttc cggagtgcgc tgctcgcaac gatagccaag aatcccggtc
      601 catacaccgc caccgtcccg gaccgcggga tccgttccgc gatccgcagg gtatcttcga
      661 gggagtcgaa cggaaggatt gccggatgct ccttccgcaa cgccggcggg atctctggct
      721 tacctccagt ggcgacgaga aggacgtcgt acgcctcctc tgcgccgttg gcaaagatca
      781 cgcggttccc ggccgagttg atcttctccg cctttattcc gtgacggacg tggattccct
      841 gttcggccag gtcctttgac tgagggtccg caatccccgc aacgtcgccc ttccccatga
      901 tcaggtcggt caggagcggt ctcaggtacg gggggcccag ctcctcggtc gcaatgacta
      961 tctcaccctt cttgtccttg ccacggatca ccttcgccgc ggcgattccg gccggaccgc
     1021 atcccaggat caggtacttc atggcacacc tcctgaagag atcgcttacg acctcaagtc
     1081 accagttcaa tgcgcgtgcg gctccgggtg gcccgccggc cccgcatgtc ccccttcgcc
     1141 gccatgtaat actttcggcc aatggggggg gtctcgagtc cagtgtcctc catgtcacac
     1201 cccgccgcaa tgatctaaat caactacgat aaatatcgta tcgtggaact ccagaggcca
     1261 gggagtaccc gggacctctg catcagtgtg ccgcctgcat cgggagcgac gccttcttcc
     1321 gtctccgttt cgccgcctgc aggttaagga actccacgaa ggcggaaaaa gcgatcgcga
     1381 agtagagata tccccggggt atgtggaacc cgatgccgtc ggcgatcagc gccatgccga
     1441 cgaggatcag gaagctcagc gccaggagct tgaccgaaat gtgggcattc acgaaacggc
     1501 tcagagactc cgaggccaac agcatgatgg cgatggcgat gatgatggcc gccgccatca
     1561 cggggaaatg ctgcgccatc ccgatggctg tgatgacgct gtccagggaa aaaacgacgt
     1621 ccaggacgag gatctgggcg attgccgccc agaacccgga aacgcgggat tggcggatct
     1681 cctcctcgac cccttccacg gtggcgtgga tctccacggt gcctttggcc agcaggaaga
     1741 gtccaccagc agccaagatg acatcgcgca aggagacgga atgtccgaac acggcgaaaa
     1801 gaggtctcgt cagccccacc aaccacgcca tgccggcaag caacaataac cgggtgatca
     1861 ccgccagccc caggccggta cggcgcgcgc ggctctgttg gaacgccggc aagcggttgg
     1921 acacgaggga gatgaagatc aggttgtcga tgcccaggat gatttccagg accgtcaggg
     1981 tcagcagact ggcccagagg cgagggtcga gcaggatttc catgcgttac ctccggatac
     2041 cctccttcat gggaggggtc ttgggcctct tgccgccgtc ttcttcgcga tcgcctaccg
     2101 acacattcat gtttcattct tgcgcttcag ccggctcttg ttcccttcca ggaaggcccg
     2161 caggtctccc gcgatgtcga gcagtcttag ccactgctca tagtacaaag tcaccgggaa
     2221 tcgccccaat ccgtagacgc tcacgccccc cttctcaccg accttgaact ccagcttccc
     2281 gcttttcttc gcttcggtcc gcttctcaag ctcggcgatc cgagccagca actcctcttt
     2341 ggtcggctcc ggcatcggca gcgccctcct ttattcggtc gatggtacag tataccgatc
     2401 ctcaccccca agggagagcc tcgcatcgtc cggacgaggg gaggcagacc gttgcggagg
     2461 acaggcaggg agattgagga aaggataccc gggagggatt ccacctgttg gaaaccgccc
     2521 c
//
LOCUS       DATGYW010000638         2260 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_48737, whole genome shotgun sequence.
ACCESSION   DATGYW010000638 DATGYW010000000
VERSION     DATGYW010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2260)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2260)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2260
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48737"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..801)
                     /locus_tag="VK429_08925"
     CDS             complement(<1..801)
                     /locus_tag="VK429_08925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014809721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HLN91965.1"
                     /translation="MVVKTHSLFEPEILRQAAGASFLKLHPRSLMKNPVMFVTEAGAF
                     LTTVSLFFRPSGEPLGFGLQVAVWLWFTVLFANFAEAMAEGRGKAQADALRRTRSQTM
                     ANRLRKDGSLETVPAEQLGKEDVVVVSAGEIIPGDGTVIEGVASVDESAITGESAPVI
                     REAGGDRSAVTGGTRVLSDRIKVVITANPGESFLDRMIRLVEGAERQKTPNEIALTIL
                     LSALTIIFLVVVMTLKFFGIYSGVSFSITVLVALLVCLIPTTIGGLLSA"
     gene            complement(818..>2260)
                     /gene="kdpA"
                     /locus_tag="VK429_08930"
     CDS             complement(818..>2260)
                     /gene="kdpA"
                     /locus_tag="VK429_08930"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011521317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HLN91966.1"
                     /translation="NPQRHGPVSEPLAFNTAVSFITNTNWQNYGGESTISYLSQMVGL
                     VLHNFTSAASGIAVAAALVRGIARHTARTVGNFLVDLVRATLYLLLPLCLLYAVILIS
                     QGMIQNFKPYERARLVEPTTVESQVIVQGPMASQVAIKMLGTNGGGYTNANAAHPYEN
                     PTPLSNFVQIFSIFLIPSGLTYYLGRMVKNQKHGWSVWGAMAVLFLAGVLLCWWAEAA
                     GNPRLHALGVDAVGGNMEGKEVRFGIFGSALFATVTTDASCGAVNAMHDSLTPLGGMV
                     PLINMHLGEVVFGGVGAGLYGMLVFVILTVFLAGLMVGRTPEYLGKKIESYDVKVSAI
                     AVLLLIFDIMVFTTLAVVSKWGLAGLNNAGPHGFSEILYAFSSATANNGSAFAGLSAN
                     TPWYNTTLAIAMMIGRFFFMVPVLALAGNLAKKKIVPESGGSFPVSGVTFVALLVGTV
                     LIVGVLSFFPALSLGPIVEHFLMVHSGVVF"
BASE COUNT          447 a          737 c          705 g          371 t
ORIGIN      
        1 ggcggagagc aggcccccga tcgtggtggg gatgagacag acgagaagcg ccaccaggac
       61 ggtgatggag aaggagacgc ccgaatagat cccgaagaac ttgagggtca tgaccacgac
      121 gaggaagatg atcgtcagcg ccgacaggag gatcgtcagg gcgatctcat tcggcgtctt
      181 ctggcgctcc gccccttcga ccaggcggat catccggtcc aggaagctct cccccgggtt
      241 cgcggtgatc acgaccttga tccggtccga gaggacgcgc gttccccccg tgacggcgct
      301 gcggtcgccg cccgcttcgc ggatcaccgg cgcggattcc cccgtgatgg cggactcgtc
      361 gacggaggcc accccctcga ttaccgtccc gtcgccgggg atgatctccc cggcgctcac
      421 gaccacgaca tcctcttttc ccagctgctc agcggggacc gtctccagcg acccgtcctt
      481 tcgaagccgg ttcgccatcg tctggctgcg cgtcctgcgg agcgcgtcag cctgcgcctt
      541 gcctcgtccc tcggccatgg cctcggcgaa gttggcgaac agcacagtga accagagcca
      601 gacggccacc tgcaggccga atcccagcgg ctcgcccgac ggacggaaga agagcgagac
      661 ggtcgtgagg aacgcccccg cctcggtgac gaacatcacg gggtttttca tcagcgagcg
      721 cgggtgcagt ttgagaaacg acgcgccggc cgcctgccgg aggatttccg gttcgaacag
      781 ggaatgtgtt tttaccacca tgttgattcc ctctctgcta aaagacgacg ccggagtgga
      841 ccatcagaaa atgctcgacg atgggcccca gggaaagcgc cgggaagaac gacaggacgc
      901 cgacgatgag gaccgtgccc accagcaggg cgacgaaggt cacccccgag accgggaagc
      961 ttccgccgct ctccgggacg atcttcttct tcgccaggtt cccggccagc gcgagtacgg
     1021 gcaccatgaa gaagaaccgg ccgatcatca tggcgatcgc cagcgtcgtg ttgtaccagg
     1081 gagtattggc ggacaaccct gcgaacgcgc tcccgttgtt ggctgtggcc gaggagaagg
     1141 cgtacaggat ctcgctgaac ccgtgcggcc ccgcgttgtt caggccggca agaccccatt
     1201 tgctgaccac cgccaacgtc gtgaacacca tgatgtcgaa gatgagcagg agcacggcaa
     1261 tcgcgctgac tttcacgtcg tacgactcga tcttcttccc cagatattcc ggcgtccggc
     1321 ccaccatcaa gcccgccagg aagaccgtca ggatcacgaa gaccagcatg ccgtagagac
     1381 ccgcgcccac gcctccgaag accacctccc ccaggtgcat gttgatcagc gggaccatcc
     1441 ctcccagagg cgtcagagag tcgtgcatcg cgtttaccgc gccgcaggag gcatccgtgg
     1501 tcacggtggc gaacagtgcg gaaccgaaga tcccgaagcg gacctccttt ccctccatgt
     1561 tccctccaac ggcatcaaca cccagcgcgt gcaggcgagg gttccccgcg gcttccgccc
     1621 accagcaaag gagcaccccg gcgaggaaca gaacggccat cgcgccccac accgaccagc
     1681 cgtgcttctg gttcttcacc atgcgtccaa ggtaataagt gaggccgctc gggatcaaaa
     1741 agatcgagaa gatctgcacg aaattggaca gcggtgtcgg gttctcgtac gggtgggcgg
     1801 cgttggcgtt ggtgtatccg cccccgttgg tccccagcat cttgatcgcc acctgcgagg
     1861 ccatcggccc ctgcacgatg acctgcgact ccacggtcgt cggctcgacg agacgggcgc
     1921 gttcatacgg cttgaagttc tggatcatcc cctgggaaat caggatgacc gcgtagagga
     1981 ggcacaaggg gagcagcagg taaagggtcg cccgtaccag atccaccagg aagttcccca
     2041 ccgttctggc ggtatgccgg gcgatgcccc gcacgagcgc cgcagccacg gcgatgccgg
     2101 aggcggcgga tgtgaaatta tggaggacga ggccgaccat ctgcgagagg tacgatatcg
     2161 tcgactcccc cccgtagttc tgccagttcg tgttcgttat gaagctgacc gccgtgttga
     2221 aggcgagagg ctcgctcaca ggaccgtgac gctgcgggtt
//
LOCUS       DATGYW010000639         4679 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_203624, whole genome shotgun sequence.
ACCESSION   DATGYW010000639 DATGYW010000000
VERSION     DATGYW010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4679
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203624"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..357
                     /locus_tag="VK429_08935"
     CDS             <1..357
                     /locus_tag="VK429_08935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HLN91967.1"
                     /translation="SNLFGDIVSDLCPALAGSLGIAPSASLNPERAFPSTFEPVHGSA
                     PDIYGKNIANPIAQILTGAMMIEHLGYPEAARMIEKAVEIVVAERKVLTRDLGGDATT
                     QQMGKAIADLVATLQA"
     gene            complement(379..1242)
                     /locus_tag="VK429_08940"
     CDS             complement(379..1242)
                     /locus_tag="VK429_08940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91968.1"
                     /translation="METTTFRTQYKKFRMLTARFFSYWFFVIFATIGVAIAVMERFTN
                     VLGVQHLEPLMILILTYAILVYIVTERAKVLDDIHENLRSAKAEVYPTRESVYMAVPL
                     IIARASADGHGRRRIFHAALHGLGGKRLAKPSRPDPVFEVFEGAIDRCVASTGPGMWH
                     VYEIYNIPDEERLDVLVELIGKRQHAEGYEVRAFAHAGGIPHLSPLVIGDEDLVVGVD
                     DPRYYRASSAIHLRGRDPVRLATEYFYSLWNDPRIRVLKTETGVNRDGIETLREEFRA
                     SERMGESPPAA"
     gene            complement(1801..3108)
                     /gene="nrfD"
                     /locus_tag="VK429_08945"
     CDS             complement(1801..3108)
                     /gene="nrfD"
                     /locus_tag="VK429_08945"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HLN91969.1"
                     /translation="MESNVNPMAIPGQPAAPDTGTLKGFLRFLWQELKPKGKILTPWN
                     IITGIIILGGIVIIAIRLAKGLGAVTNLSQEYPWGIWIGFDVVTGVAFAGGAYILTFA
                     VHILKVKKYEPIVRATVLNGFLAYVFYSGALLLDLGRPWNVVNPIIGNAFGYGSVLFL
                     VAWHFLLYTLCLFVEVCPAIAEWLKWVKARRIIQKMTTATIILGVTLSTLHQAGLGAL
                     FLTAPSKIHPLWYSANIPVLFFISSMFAGFSMITIESMFTHKIFSDRLDEAHRASHDK
                     ILLGLAKGSASVMAAYLFLKVIDLTHGHQLGLLLTPMGLWYLVEVAGFTLLPLVLYVV
                     AIRRQSVKLVQRTAILTAIGVILNRLNISVIAFKWYEAVRYYPSWMEIWVTLAVISME
                     LWVFQWVINRMPILGAHPDFKTEEQALDNLKERDVVRWKGTVS"
     gene            complement(3098..4009)
                     /locus_tag="VK429_08950"
     CDS             complement(3098..4009)
                     /locus_tag="VK429_08950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012096579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HLN91970.1"
                     /translation="MGINRRNFLKVAGAAGGVLLAGGARMARSAQTAQPAGSSMEFFG
                     LLLDTTKCIGCRACEEGCNAKWSLPKPEVPFSSESVFEKKRETTPEAYLVVNRFPNEK
                     SPEKPIFVRRQCMHCTEPSCASACLCKAMEKMPEGPTVYHKDRCMGCRYCMISCPFDI
                     PKFQYDSASPFVKKCIGCPDLVAKGEQTACAEACPTGATLFGKRRDLIEEAKKRIYEN
                     PDRYYPHIYGEHEVGGTGYMYLSAVPFEKLSFRTDLGTKHYPELTSGFLSSVPLVDIL
                     WPAVLFGFNYLISDKEEEGGKENDHGE"
     gene            complement(4058..4534)
                     /locus_tag="VK429_08955"
     CDS             complement(4058..4534)
                     /locus_tag="VK429_08955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HLN91971.1"
                     /translation="MKKAMILPAAVFLWMGVFAAQGATTGGNLPTILILGSLSKVYEP
                     VRFNHAEHVSLAGGCGDCHHQHRLLQIQTCSECHRIDPAAFKKNVIADKILPCRDCHS
                     ASERPGATGQPSLKYAYHQACLKCHWGDVGSAGKNLEGCTEVCHAPKVPVNREKKK"
BASE COUNT          892 a         1431 c         1475 g          881 t
ORIGIN      
        1 agcaacctgt tcggggacat cgtctccgac ctgtgcccgg cgctggcggg cagcctcggc
       61 atcgcgccgt cggccagcct gaaccccgag cgcgcgttcc cgtccacgtt cgagccggtg
      121 cacggctcgg ccccggacat ctacgggaag aacatcgcga acccgatcgc gcagatcctc
      181 accggggcca tgatgatcga gcacctgggg tacccggaag cggcccggat gatcgagaag
      241 gccgtggaga tcgtcgtggc ggaaaggaaa gtcctgaccc gggacctcgg cggcgacgcc
      301 acgacgcaac agatgggaaa agccatcgcc gacctggtgg cgacattgca agcgtgaccg
      361 acgggcggtt caggaccctc aggccgcggg gggtgattcc cccatgcgtt cggatgcgcg
      421 gaactcctcg cggagagttt caatcccgtc ccggttgacg ccggtctccg tcttgaggac
      481 ccggatgcgc gggtcgttcc acagggagta gaagtactcg gtcgccaaac gaacgggatc
      541 gcggccccgc aggtggatcg ccgaactggc cctgtagtaa cggggatcgt cgacgccgac
      601 gacgaggtcc tcgtcgccga tgacgagcgg ggagagatgg ggtatccccc cggcatgcgc
      661 gaaggctctg acctcgtacc cctcggcatg ctgccgtttc ccgatcaact ccaccaggac
      721 gtcgagcctc tcctcgtcgg gtatgttgta gatctcgtat acgtgccaca tccccggccc
      781 ggtggaggcg acgcaccggt cgatcgcccc ctcgaatacc tcgaacacgg gatcgggcct
      841 ggacggcttc gccagccgtt tcccgccgag gccgtgaagc gcggcgtgga agatccgccg
      901 acgcccatgg ccgtcggcgg aggcccgcgc gatgatcagc gggacggcca tgtagacgga
      961 ctcacgggtc ggatacactt cggccttggc gctccggagg ttctcgtgga tatcgtcaag
     1021 gaccttcgcc cgttcggtca cgatgtagac gaggatcgca tacgtcagga tcaggatcat
     1081 gaggggttcg aggtgctgga cgccgaggac gttcgtgaaa cgctccatta ccgcgatggc
     1141 gacgccaatg gtcgcgaaga tgacgaaaaa ccagtagctg aagaagcggg cggtgagcat
     1201 gcggaacttc ttgtactggg tcctgaaggt cgtcgtttcc atggaatacc ctcctctgcg
     1261 gaaaaacgcg acggtttgcc cgcccccatg cggcacggac aacatctccg tgccccggca
     1321 agggcatcgg cagcaattgg agtgggatag gacagaagta cgcaagaatt gtgcctcggc
     1381 gactcacccc gcgaccggaa gtgactgttt ttcttacggt tcgttcatgg gaccctaagc
     1441 ccccggaaac attcgggaga ccatggccgc ttgaacggat ggcaggaaga tgggataccc
     1501 cggaggggtg ttcccaggcg ctctcgcgca ttacgaatca gaactcgcat cccgggggat
     1561 tccgatattg aaagaatcca tcggagaaac atccggctcg ccgagggagg aaagagcatc
     1621 tgatccgcgc tcgataccga cgggcgaagg gtagagttcg tgaagttctg acgttccggt
     1681 acaagaacgc cggagaaggc cgctcctgcg ggggcggcct tctccggcgt ggtgcctccg
     1741 gtctgtgtta ctccccgccc gggggcgggc ctgaggatat acccctggtc gaatagaagt
     1801 ctacgagacg gtacccttcc atcgcacgac atccctttcc ttgaggttat caagggcttg
     1861 ctcttccgtc ttgaagtccg ggtgcgcgcc gaggatcggc atacggttga tgacccactg
     1921 gaacacccag agttccatgc tgatgaccgc cagcgtgacc cagatctcca tccaggacgg
     1981 gtaataccgc accgcctcgt accacttgaa cgcgatcacg gagatgttca gccggttcag
     2041 gatcacgccg atggccgtga ggatcgcggt tctctggacg agttttacgc tctgccgccg
     2101 gatggcgacg acgtagagta cgagggggag cagggtgaac ccggcgacct cgacgaggta
     2161 ccagagcccc atcggggtga ggagcaaccc cagctggtgg ccgtgcgtca ggtcgatcac
     2221 tttcaggaac aggtacgcgg ccatgacgct ggccgacccc ttcgcgaggc caaggaggat
     2281 cttgtcgtga gacgcccgat gggcttcgtc gagccggtcg gagaagatct tgtgcgtgaa
     2341 catgctctcg atggtgatca tcgagaaccc cgcgaacatg ctcgagatga agaacaggac
     2401 cgggatgttg gcggaatacc acagggggtg gatcttggat ggcgccgtga ggaacaaggc
     2461 gcccagcccc gcctggtgga gcgtggacag cgtcacgccc aggatgatgg tggcggtggt
     2521 catcttctgg atgatccgcc gcgccttgac ccatttcagc cactcggcga tcgcggggca
     2581 gacctcgacg aacaggcaga gggtgtacag gaggaagtgc caggcgacga ggaagagcac
     2641 cgacccgtac ccgaacgcgt tcccgatgat cgggttgacg acgttccagg ggcggcccag
     2701 gtcgagcagg agggcgccgc tgtagaagac gtaggccaga aagccgttca gcacggttgc
     2761 ccgcacgatc ggctcgtact tcttgacctt caggatgtgc acggcgaagg tcaggatgta
     2821 cgcgcctccc gcgaaggcga cgcccgtcac gacgtcgaag ccgatccaga tcccccaggg
     2881 atactcctgg gagaggttcg tcacggcgcc gagccccttg gcgagacgga tggcgatgat
     2941 gacgatcccg cccaggatga tgatcccggt gatgatgttc cacggcgtca ggatcttccc
     3001 cttgggcttc agctcctgcc acaggaaccg caggaacccc ttcagggtac ccgtgtccgg
     3061 ggcggccggc tgcccgggga tggccatcgg gttgacgtta ctctccatgg tcgttctcct
     3121 tcccgccctc ttcctctttg tcggaaatga ggtagttgaa gccgaacagg accgccggcc
     3181 agaggatgtc cacgagtggc acggaggaga ggaacccgga agtcagctcc ggataatgct
     3241 tcgtccccag gtcggtccgg aaggagagct tttcgaacgg gacggccgag aggtacatgt
     3301 agcctgtgcc cccgacttca tgttccccgt agatgtgcgg gtagtaccgg tccgggttct
     3361 cgtaaatccg tttcttggct tcctcgatca aatccctccg ctttccgaac agggtcgcac
     3421 ccgtggggca ggcttccgcg cacgcggtct gttccccctt cgccacgagg tcggggcatc
     3481 cgatgcactt cttcacgaac ggggaagcgc tgtcgtactg gaacttcggg atatcgaagg
     3541 ggcaggaaat catgcaatat cggcatccca tgcagcgatc cttgtggtag acggtcggtc
     3601 cttcgggcat cttctccatc gccttgcaaa ggcaggccga ggcgcaggaa ggctcggtgc
     3661 aatgcatgca ctgcctccga acgaagatcg gcttctccgg gctcttctcg ttcgggaacc
     3721 ggttgacgac aaggtaggct tccggggtcg tttccctctt cttctcgaac acgctctcgc
     3781 tggaaaaggg aacttccggc ttgggcagac tccacttcgc gttgcacccc tcctcgcagg
     3841 cgcggcagcc gatgcacttg gtcgtgtcga ggaggagccc gaagaactcc atgctgcttc
     3901 ccgcgggctg cgcggtctgc gcggaccggg ccatcctggc tcccccagcg agcaaaacgc
     3961 cgccggccgc ccccgcgacc ttcaggaagt tccgtctgtt gatgcccatc tcccttccct
     4021 cccgtggtat ccgacgtcag cggaaatact tcactcccta ctttttcttt tcccggttca
     4081 cagggacttt cggggcatgg cacacttcgg tgcagccttc caggttcttc ccggcgctgc
     4141 ccacatctcc ccagtggcat ttgaggcagg cctggtggta ggcgtacttg agtgagggct
     4201 gcccggtggc tccgggcctc tcggacgccg agtgacaatc ccggcaaggc aggatcttgt
     4261 cggcgataac gttctttttg aaggcggcgg ggtcgatccg atggcactcc gaacaggttt
     4321 gaatctgcaa taaacggtgc tggtggtggc agtccccgca tccgcctgcc agcgaaacgt
     4381 gctctgcgtg gttgaaacgg accggttcgt aaaccttgga caagctcccg agaatgagaa
     4441 tcgtcgggag gtttcccccg gtggtcgccc cctgtgccgc gaataccccc atccatagga
     4501 aaacggcagc ggggagaatc atcgctttct tcatgtaacc ggcctccttc ggtcaatgga
     4561 tccttcgagt tcctcttccg gcattcaata ctacgcacgg ggatttcata tcgccatcac
     4621 aataataatc ccgttcgaac cttcaacctc cccaataata ctcaagtgcg ctatccagg
//
LOCUS       DATGYW010000640         2007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_203798, whole genome shotgun sequence.
ACCESSION   DATGYW010000640 DATGYW010000000
VERSION     DATGYW010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_203798"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..652)
                     /locus_tag="VK429_08960"
     CDS             complement(<1..652)
                     /locus_tag="VK429_08960"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HLN91972.1"
                     /translation="MPYTDAPGFRMYYEEHGNGFPLLLINGLGSDHLEWLHQLPAFEA
                     RFRLVVFDNRGTGLTDVPPGPYTTAQMADDAASLLRALGIPRAHVLGVSLGGMIAQEV
                     ALRHPDRVDRLVLGCTGPGGELSVRPSPEAMAAFALAKGENPEAELHRMLPFLYTDAC
                     IRERPEEIEGFVRRRLDHPTPPEGYLAQLSAAVTHDASSRLGKIRSRTLVITGDADR"
     gene            700..>2007
                     /locus_tag="VK429_08965"
     CDS             700..>2007
                     /locus_tag="VK429_08965"
                     /inference="COORDINATES: protein motif:HMM:NF017633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NFACT family protein"
                     /protein_id="HLN91973.1"
                     /translation="MDAFLLKQVIAELAAEIPGALVSKVHQPGEKEIVLELWGRGEKR
                     LLLSADPELCRIHLTTRKTPNPPSPPRFCQFLRKHLEGMRIAGFSVAPYDRSVRVDFV
                     SSRPDAEHATTSLYAELFGRHANLIYVDGDGMILEPLRTVSDEESRIREVVPGIPYRP
                     LPRPARVFLPDVTRDDAVRIFASGWEGLPKALQENVAGLGREIAHEAAARGQESPDAL
                     YEQARDLVRRYEESDFAPGIGTLAGGKRRLLPFPCPAAGFAEFLPFPTANAAADAFYA
                     DVAESREIAVLRQQVKSRIAALLKKERHKLENVGGDEERLAEGLQGTDRGETLKANLG
                     SLKKGMESYRNIPLDPAKTPVENMNRYFRLARKAKGATEIVRKRKREVAESVYYLESL
                     EGPLEAARTRDDVIAVRQELSSSFPARAKPVSKKKNYRKDAPRP"
BASE COUNT          347 a          702 c          667 g          291 t
ORIGIN      
        1 ggcggtccgc gtctcccgtg ataacgagcg ttctcgaccg gatcttcccg agccgcgacg
       61 acgcatcgtg ggtcaccgcg gcggacagct gggcgaggta cccctccggc ggcgtcgggt
      121 ggtcaagccg cctccggacg aatccctcga tctcctcggg ccgctcacgg atgcacgcgt
      181 cggtgtagag aaacgggagc atccggtgca actccgcttc cggattctcc cccttcgcaa
      241 gggcgaacgc cgccatcgcc tccggggacg gccggaccga gagctcccct cccggcccgg
      301 tgcaccccag caccaaccga tccacccggt ccgggtggcg caacgcaacc tcctgcgcga
      361 tcatccctcc cagcgaaacg ccgaggacgt gggcccgggg aatgccgagg gcccgcagca
      421 gcgatgccgc gtcgtccgcc atctgcgccg tcgtgtacgg cccgggcggg acgtcggtca
      481 accccgttcc ccggttgtcg aagacgacca gccggaagcg cgcttcgaag gcgggaagct
      541 ggtggagcca ttcgaggtga tcgctcccca gcccgttgat cagcagcagc gggaacccgt
      601 tcccgtgctc ctcgtaatac atccggaacc cgggggcatc ggtgtacggc attttcaagg
      661 tcctcccttc gacattatag ccggcctata atgggcccga tggacgcctt tctcctcaaa
      721 caggtgatcg cggagctcgc ggcggagatt ccgggagcgc tggtctcgaa ggtccaccag
      781 ccgggggaga aggagatcgt cctcgaactg tggggacggg gggagaagcg gctgctcctg
      841 tccgccgacc cggagctgtg ccgcatccac ctcacgacgc gcaagacccc gaacccgccg
      901 tcgccgcccc gcttctgcca gttcctccgg aagcatctcg aggggatgcg gatcgcgggg
      961 ttttccgtcg ccccgtacga tcgctccgtg cgggtcgact tcgtctccag ccgcccggac
     1021 gcggagcacg cgacgacctc cctgtacgcc gagctgttcg gccgccacgc caacctcatc
     1081 tacgtggacg gcgacgggat gatcctcgaa ccgttgcgca cggtatccga cgaggagagc
     1141 cggatccggg aagtcgtccc cgggattccg taccgcccgt tgcccagacc cgcgcgggtc
     1201 ttcctgcccg atgtgacgcg ggacgatgcc gtacggatct tcgcgagcgg gtgggaagga
     1261 cttccgaagg ccctgcagga aaacgtggcc ggcctagggc gggaaatcgc gcacgaggcg
     1321 gctgcgcgcg gacaggaaag ccccgatgcc ctgtacgaac aggcgcgcga ccttgtccgc
     1381 cggtacgagg agagcgactt cgcccccggg atcggaacgc tcgccggcgg gaagcggcgg
     1441 ctcctcccct tcccctgccc ggcggcggga ttcgcggagt tcctcccctt ccccaccgcc
     1501 aacgcggcgg cggacgcctt ctacgccgac gtcgccgagt cccgggaaat cgccgtcctc
     1561 cggcagcagg tcaaatcccg gatcgccgcg cttctgaaga aggagcgcca caagctggag
     1621 aacgtgggag gcgacgagga gcggctcgcc gaggggcttc agggaaccga tcgcggggag
     1681 acgctgaagg cgaacctcgg atcgctgaag aaggggatgg aatcctaccg gaacatcccg
     1741 ctcgatcccg cgaagacccc cgtggagaat atgaaccggt acttccggct cgcccggaag
     1801 gcgaagggtg cgacggagat cgtacggaag cggaagcgcg aagtcgccga atccgtctac
     1861 tacctcgagt cgctcgaggg tccgctcgag gcggcgcgga cgcgggacga cgtgatcgcc
     1921 gtgcggcagg agctctcctc ctccttcccc gcaagggcca aaccggtctc gaagaagaag
     1981 aactaccgca aggacgctcc ccgcccc
//
LOCUS       DATGYW010000641         2216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_95573, whole genome shotgun sequence.
ACCESSION   DATGYW010000641 DATGYW010000000
VERSION     DATGYW010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95573"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..374)
                     /locus_tag="VK429_08970"
     CDS             complement(<1..374)
                     /locus_tag="VK429_08970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011189442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HLN91974.1"
                     /translation="MAVRDGNILIFDGACGTNLQRMEIPASAWQGRDGCNEFLNVTAP
                     EVIREWHSSFLSAGATVLETNTFGANGIVLAEYGLADRVAEINRAAVGNAREAIRRHG
                     GPAHVAGSIGPTTKLPSLGHIA"
     gene            574..1938
                     /locus_tag="VK429_08975"
     CDS             574..1938
                     /locus_tag="VK429_08975"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012527703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HLN91975.1"
                     /translation="MAPVEEKADERRSANVSNLKAKLLEKILAHRPRTTKLVKEQGKI
                     VIDQVTIDQCIGGARDVRCLVTDISYLDPQEGIRFRGKTIPETFAALPKVPGCDYPYV
                     EGFWYFLLTGDVPTKEQALEVVEDFKARANVPQYVFDVLRAMPRDTHPMTMFSTAVLA
                     MQRESQFVKRYNAGMKKTEYWDPMYEDCTNIMAKIPGIAAYIYRMKYKADTPIAPNPN
                     LDLGGNFAHMMGLAKPYDDVARMYFILHSDHESGNVSAHTTHLVASALSDAYYSFSAG
                     LNGLAGPLHGLANQEVLSWIQEVFGKLGGKLPTEEELKKFLWDTLNSGKVIPGYGHAV
                     LRKTDPRYTSQMEFCQKNLPDYPMFKLVNMIYKVAPDILREHGKAKNPWPNVDAQSGV
                     IQWYYGLTEYDFYTVLFGVGRALGVLANITWDRALGYALERPKSVTTDMLEKWAAEGG
                     RKLA"
     gene            complement(2026..>2216)
                     /locus_tag="VK429_08980"
     CDS             complement(2026..>2216)
                     /locus_tag="VK429_08980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91976.1"
                     /translation="FDGADSPHAHFHCVHCSALLDIPLPPALESLRFEEEKRIAAVSL
                     IDLHVLGSCAGCEGAATH"
BASE COUNT          446 a          728 c          686 g          356 t
ORIGIN      
        1 aaggcgatgt ggcccagcga cgggagcttc gtggtgggcc cgatggaccc cgccacgtgc
       61 gcgggcccgc cgtgccggcg gatcgcctcg cgggcgtttc cgaccgccgc ccggttgatc
      121 tcggcgaccc ggtcggccag accgtactcc gcgagaacga tcccgttggc gccgaaggtg
      181 ttcgtctcga gcaccgtcgc cccggcggag agaaaggagg aatgccactc cctgataacc
      241 tcgggggcgg tcacgttcag gaattcgttg cacccgtccc gtccctgcca ggcggacgcg
      301 gggatctcca tccgctgcag gttcgtcccg cacgccccgt cgaaaatcag tatgttcccg
      361 tcccggaccg ccatcgatct cccctcggta agtgcccaat cctacaacag aaatcacacg
      421 tagtcaaacc ggttttcttt ccgcttgact tcgcggatcc attcctgcta agtagataga
      481 accgtgtata ccgtatacat ctcacagcgc tgatttcacg gcccgcaata aagcacaatc
      541 gatcgctata ccacccgaaa ggaggcaggg atcatggccc cggtagaaga aaaagccgac
      601 gaaaggagaa gcgcaaacgt gtcgaacctc aaggcgaaac tcttggagaa gatcctggcc
      661 caccgtccgc gtacgaccaa gctggtcaag gagcagggga agatcgtgat cgaccaggtc
      721 accatcgacc agtgcatcgg cggcgcccgc gacgtccgct gcctcgtgac cgacatttcc
      781 tacctcgacc cgcaggaggg gatccgcttc cgcggcaaga cgattcccga gacgttcgcg
      841 gcgctgccca aggtccccgg gtgcgactat ccgtatgtcg aaggattctg gtacttcctc
      901 ctcaccggcg acgttccgac gaaagagcag gctctcgaag tcgtcgagga cttcaaggcg
      961 cgggcaaacg tgccccagta cgtgttcgac gtcctccggg cgatgccgcg cgacacccat
     1021 cccatgacga tgttctccac cgccgtcctg gcgatgcagc gggaatcgca gttcgtgaag
     1081 cggtacaacg ccggcatgaa gaagaccgag tactgggacc cgatgtacga agactgcacg
     1141 aacatcatgg cgaagatccc cgggatcgcc gcatacatct accggatgaa gtacaaggcc
     1201 gacacgccga tcgcccccaa cccgaacctc gacctcggcg ggaacttcgc gcacatgatg
     1261 ggattggcga agccgtacga cgacgtcgcc cggatgtact tcatcctcca ctccgaccac
     1321 gagtccggga acgtctcggc gcacacgacg cacctggtcg cctcggcgct ctccgacgcg
     1381 tactactcct tctccgccgg cctcaacggc ctggcgggcc ccctccacgg cctggcgaac
     1441 caggaagtgc tttcgtggat ccaggaggtg ttcgggaagc tgggcgggaa gctcccgacc
     1501 gaggaggagc tcaagaagtt cctgtgggac acgctgaaca gcggaaaggt catccccggc
     1561 tacggccacg ccgtgctccg caagaccgat ccgcggtata cgtcgcagat ggagttctgc
     1621 cagaagaacc tgccggacta cccgatgttc aagctggtga acatgatcta caaggtggcg
     1681 ccggacatcc tccgggagca cgggaaggcg aagaacccgt ggccgaacgt cgacgcgcag
     1741 tcgggcgtca tccagtggta ctacggcctc accgagtacg acttctacac cgtgctcttc
     1801 ggcgtcggcc gggccctcgg cgtcctggcg aacatcacct gggatcgcgc gctggggtac
     1861 gcgctcgagc gtccgaagtc ggtcacgacc gacatgctgg agaagtgggc cgccgaaggg
     1921 ggccgcaagc tcgcgtaagc gactccgccg taatcacgaa aacgggaagg gggccgaaag
     1981 gccccctttt cgttgggaag gagtgtcctg cgccggccct gcggatcagt gcgttgccgc
     2041 cccctcacac ccggcgcagg aaccgaggac gtgcaggtcg atgagggaaa ccgccgcgat
     2101 cctcttctcc tcctcgaacc ggaggctctc gagggccggg ggcagcggga tgtcgagcag
     2161 cgcgctgcag tggacgcaat ggaagtgcgc gtggggggaa tccgccccgt cgaagc
//
LOCUS       DATGYW010000642         2389 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_204004, whole genome shotgun sequence.
ACCESSION   DATGYW010000642 DATGYW010000000
VERSION     DATGYW010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2389
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204004"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            142..594
                     /locus_tag="VK429_08985"
     CDS             142..594
                     /locus_tag="VK429_08985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011385164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HLN91977.1"
                     /translation="MVGNADLFVNWARKSSLWYLLFATACCGIELMQAGASRYDMDRF
                     GAVFRATLRQSDLMLVAGTITHKMADRVKRLYDQMPEPKYVIAMGSCANTGGPFYKDS
                     YCVVKGVDLLIPVDVYIPGCPPRPEALIDGIMQLQKIIMQKKNYGAKA"
     gene            611..1081
                     /locus_tag="VK429_08990"
     CDS             611..1081
                     /locus_tag="VK429_08990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006929591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HLN91978.1"
                     /translation="MEAQAIFDTLKGKFGDAVVELQSEGFSPAFVVVAPTAVKEVARF
                     LKDDPTLSFDSLMSLSGVDYKDRFAVAYHLHSMKHRHAIGVKAFLPRETPSLPTVDDV
                     WPAANFHEREAFDLFGIVFEGSKDLRRILLPEDWEGHPLRKDYKYPDFYHGIKV"
     gene            1078..2208
                     /locus_tag="VK429_08995"
     CDS             1078..2208
                     /locus_tag="VK429_08995"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011878366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HLN91979.1"
                     /translation="MTIRTDALPTQEMTINMGPQHPSTHGVLRVILTTDGEVVTRAVP
                     DVGYLHRGLEKIGERVTYAQFMPFTDRLDYLAAMNCNCAWAWAVEKLAKIEAPERAEY
                     LRVIVCELKRISSHLIAFGSYTADMGAFTPFLYAIREREKVNDLFEMICGNRLTYNYA
                     RVGGVSGDAPPGFLEKTKEFLDYFEPKLDEYNNLISYNKIFVHRLANVAVVSAEDAVA
                     YGLTGPNLRGSGVPFDLRKDEPYSVYPKLDFKVCVGTGERGTLGDCFDRYMVRINEMR
                     ESIKIVRQAVAQIPDGPVLAKVPRVFKPPVGEAYFRSECPRGETGIYLISDGSVNPFR
                     LKIRTGSFVAMNIFEKVTRGLMIADVVAVIGSFDIILPEIDR"
BASE COUNT          407 a          790 c          798 g          394 t
ORIGIN      
        1 cctggagtgg gtccgcaccc tacaggacgc cccggcgaag aagggggcga aatgagtccc
       61 gatcccgcgc acggcgcccc gcccggatcc cccgccgcat ccgccgccgg tccggcggtt
      121 tcggggcccg aggcgcacgt catggtggga aacgcggacc tgttcgtcaa ctgggcgcgc
      181 aagtcctccc tctggtacct cctgttcgcc acggcgtgct gcggcatcga gctgatgcag
      241 gcgggcgctt cgcggtacga catggaccgg ttcggcgccg tcttccgcgc caccctccgg
      301 cagtcggacc tgatgctggt ggccggaacg atcacccaca agatggcgga ccgggtgaag
      361 cgactctacg accagatgcc cgagccgaag tacgtgatcg ccatggggtc gtgcgccaac
      421 accggcggcc cgttctacaa ggactcgtac tgcgtggtga agggggtgga cctgctgatc
      481 cccgtggacg tctacatccc cgggtgcccc ccgcgccccg aggcgctgat cgacgggatc
      541 atgcagctgc agaagatcat catgcagaag aagaattacg gcgcgaaggc gtgaagggat
      601 aaccgacccg gtggaagcgc aggcgatctt cgacacgctg aaggggaagt tcggcgacgc
      661 cgtcgtcgag ctgcagtcgg aagggttctc ccccgccttc gtcgtggtcg cccccaccgc
      721 ggtcaaggag gtcgcgcggt tcctcaagga cgacccgacg ctctccttcg actccctcat
      781 gagcctctcc ggcgtggatt acaaggacag gttcgccgtg gcgtaccacc ttcactcgat
      841 gaagcaccgc cacgcgatcg gcgtgaaggc gttcctgccc cgcgaaaccc cgtccctccc
      901 gacggtggac gacgtctggc ccgccgccaa cttccacgag cgggaggcgt tcgacctgtt
      961 cgggattgtg ttcgaggggt cgaaggacct tcggcggatc cttctgccgg aggactggga
     1021 ggggcacccg ctgcggaagg attacaagta ccccgacttc taccacggga tcaaggtatg
     1081 acgatccgga ccgacgcgct ccccacgcag gagatgacga tcaacatggg gccgcagcac
     1141 ccgagcaccc acggggtgct ccgggtgatc ctcaccaccg acggcgaggt ggtgacccgc
     1201 gcggtgccgg acgtcgggta cctgcaccgc ggcctggaaa agatcgggga gcgcgtaacc
     1261 tacgcccagt tcatgccgtt caccgaccgg ctcgactacc tggcggcgat gaactgcaac
     1321 tgcgcctggg cgtgggcggt ggagaagctg gcgaagatcg aggcccccga gcgcgccgaa
     1381 tacctgcgcg tcatcgtctg cgagctgaag cggatctcct cgcacctgat cgcgttcggg
     1441 tcgtacaccg cggacatggg ggcgttcacc ccgttcctgt acgccatccg cgagcgggag
     1501 aaggtgaacg atctcttcga gatgatctgc gggaaccgcc tgacatacaa ttacgcccgc
     1561 gtcggcggcg tctcgggcga cgctccgccg ggctttctcg agaagacgaa ggagttcctc
     1621 gactacttcg agccgaagct cgacgagtac aacaacctca tctcctacaa caagatcttc
     1681 gtccaccggc tggcgaacgt cgccgtggtc tccgcggagg atgcggtcgc ctacgggctg
     1741 acgggtccca acctgcgcgg gtcgggcgtc cccttcgacc tgcggaagga cgagccgtac
     1801 tccgtctacc cgaagctcga tttcaaggtc tgcgtcggca ccggggagcg cggcacgctc
     1861 ggcgactgct tcgaccggta catggtgcgg atcaacgaga tgcgcgagag catcaagatc
     1921 gtccggcagg cggtcgcgca gatccccgac gggccggtgc tggcgaaggt cccccgcgtc
     1981 ttcaagccgc cggtcgggga ggcgtacttc cgctccgagt gcccgcgggg ggagacgggg
     2041 atctacctga tcagcgacgg ctcggtgaat cccttccggc tgaagatccg caccggctcc
     2101 ttcgtggcga tgaacatctt cgagaaggtc acgagggggc tgatgatcgc ggacgtcgtc
     2161 gccgtcatcg gcagcttcga catcatcctc ccggagatcg atcggtagcg acatggatac
     2221 cctggcccaa tccctcgtga acgccgtccc gctgctggcg ggcgtccccc tgtggacggt
     2281 gaccctgctg ctgatggtgg tggcggcggc ggtcatcctc gtcttcgcgc tgacgttcga
     2341 gggggtgggg tcgctggtgc tgcgcaaggt cgccggcgac atccaggcc
//
LOCUS       DATGYW010000643         1556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_524973, whole genome shotgun sequence.
ACCESSION   DATGYW010000643 DATGYW010000000
VERSION     DATGYW010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_524973"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..415
                     /locus_tag="VK429_09000"
     CDS             <1..415
                     /locus_tag="VK429_09000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006425285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN91980.1"
                     /translation="VDDNLGIVYRRTREWDRERVYDLFPALRDISGRRAGVLSGGEKA
                     MLAVGRALMSGPKLLLLDEPTEGLAPLIVRALEAQILRLKGEGISILLSEQNLKSSLR
                     LIDRAYIIDNGRIRYQGTAKELEDNEEIKRMHLML"
     gene            427..1485
                     /locus_tag="VK429_09005"
     CDS             427..1485
                     /locus_tag="VK429_09005"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HLN91981.1"
                     /translation="MDEKGEFNREVAALCWDLGLMTLTFPPRHGGMERNQGTALCLAV
                     EEIARHCASSSLLLIIQAVSTFPILHGGRPELLEKLLPRMVEKRELAAYLVTEPSAGS
                     DVGAIRTTAARDGGEYVLDGTKCFATNGAVASVYAVLARTSPSGGHDGLSFFLVERDN
                     PGLSIGRIEKKLGQRGSNTAEVILDEVRVPAGNLLGEEGKGFLLAMKDFDMSRPAVGA
                     QALGIAEGALEEMLRYAQQRKTFGKPLCEHQMIRQILADSAILVEASRGLVYRAARLF
                     DEGRRNTKLASMAKVFASDAAMKITTDAVQVFGGYGYMRDFPVERMFRDAKLTQIFEG
                     ANQIQRLVIAREILKETA"
BASE COUNT          283 a          467 c          561 g          245 t
ORIGIN      
        1 cgtcgacgac aacctcggca tcgtctaccg gaggacccgc gaatgggacc gggagagggt
       61 gtacgacctg ttccccgcgc tccgggatat ctccggccgg cgggcggggg ttttaagcgg
      121 aggcgaaaaa gcgatgctgg cggtggggcg ggctctcatg agcggtccga agcttctcct
      181 gctcgacgaa ccgacggaag gcctcgctcc gctgatcgtc cgggcgctcg aggcgcagat
      241 cctgcggctg aagggggagg ggatcagcat cctcctctcg gagcagaacc tgaagtcgtc
      301 gctgcggctg atcgaccggg cctacatcat cgacaacggc aggatccggt accaggggac
      361 ggcgaaggag ctcgaggaca atgaagagat caagcggatg cacctgatgc tgtagggcgt
      421 gagtcgatcg acgagaaggg ggagttcaac cgcgaggtgg ccgcgttgtg ctgggacctg
      481 ggcctgatga cgttgacctt ccccccccgg cacgggggga tggagcggaa ccagggaacc
      541 gcgctgtgtc tggcggtgga ggagatcgcg cggcattgcg cctcttcctc cctgctgctg
      601 atcatccagg cggtgagcac gttcccgatc cttcacgggg ggcggcccga gctgctggag
      661 aaattgcttc cccgcatggt cgagaaacgg gagctggccg cctacctcgt gacggaaccc
      721 tccgcgggct cggacgtggg cgcgatccgc accaccgcgg caagggacgg gggagagtac
      781 gtcctcgacg ggacgaaatg tttcgccacc aacggggccg tggcgtccgt ctacgccgta
      841 ctcgcccgga cctccccttc ggggggtcac gacgggttgt cctttttcct ggtggagcgg
      901 gacaacccgg gactttcgat cggaaggatc gagaagaagc tcggccaacg gggctccaac
      961 accgcggagg tgatcctcga cgaggtgcgt gtgcccgccg ggaacctcct cggggaggag
     1021 gggaagggat tcctgctcgc catgaaggat ttcgacatgt cccgccccgc cgtcggcgcc
     1081 caggccctgg gcatcgccga gggagccctc gaggagatgt tgaggtacgc gcaacagcgc
     1141 aagacgttcg gcaagccgtt gtgcgagcac cagatgatcc ggcagatcct cgccgacagc
     1201 gcgatcctgg tcgaggcgtc gcgggggctc gtctaccggg cggcgcggtt gttcgacgag
     1261 gggcggcgca acaccaagct cgcctcgatg gcgaaggtgt tcgcatcgga cgccgccatg
     1321 aagatcacga ccgacgccgt ccaggtgttc ggggggtacg gctacatgcg ggacttcccc
     1381 gtggaacgca tgttccggga cgccaagctg acccagatct tcgagggcgc aaaccagatc
     1441 cagcggctgg tgatcgccag ggagatcctg aaggagaccg cctgagggcg cgttgaaggt
     1501 gaagacgccg ccgctacatc cgaccggagg gtgcagatga tccgattgac cgatga
//
LOCUS       DATGYW010000644         1999 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_525055, whole genome shotgun sequence.
ACCESSION   DATGYW010000644 DATGYW010000000
VERSION     DATGYW010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1999
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_525055"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..232)
                     /locus_tag="VK429_09010"
     CDS             complement(<1..232)
                     /locus_tag="VK429_09010"
                     /inference="COORDINATES: protein motif:HMM:NF015427.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PCRF domain-containing protein"
                     /protein_id="HLN91982.1"
                     /translation="MWDKLESVVARIPELERLLSDPSVTGNPREMQRIGRELAELRPV
                     AVAHSRYRKIEQELADNRALQDGENDPAMKVMV"
     gene            complement(222..1172)
                     /locus_tag="VK429_09015"
     CDS             complement(222..1172)
                     /locus_tag="VK429_09015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012469101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1385 domain-containing protein"
                     /protein_id="HLN91983.1"
                     /translation="MMPPEPAELVLGGQAVIEGVMMKGPLAYAVAVRKASGEIRVRDF
                     PLVESAARKRIAKIPLVRGVVTMAAMLAIGYRALQYSADEAMEDAEGAPDAAKVTGEG
                     AKSGGLAMAGAMAMALLLGVGLFFLIPLYATHLLAGLVPALRGSIAFNLADGAIRVLI
                     FVLYIVGITRMKDIRRVFEYHGAEHKVINAYEAKADLSPEAVREYPRLHPRCGTSFLL
                     FVMVISILVFSLIPRESSLLAKALLRLPLIPAIAGISYEVLRLSARKTRSPGFRALVA
                     PGLWLQRLTTREPDLPQIEVAIASFRRVSGPSGSEASLVG"
     gene            complement(1169..1870)
                     /gene="thyX"
                     /locus_tag="VK429_09020"
     CDS             complement(1169..1870)
                     /gene="thyX"
                     /locus_tag="VK429_09020"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011342472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HLN91984.1"
                     /translation="MNVSLLTCTPDPERVVALAARLCYSPASIGELREEISRRDARNL
                     VRRVLSMGHASVLEHVTLTYGVEGISRAASHQLVRHRIASYSQQSQRYVAAKFGYVTP
                     PTVAASPDLLAGYERHMAACSRLYAKLMKAGVPPEDARFALPNATETKILITMNAREL
                     HHFFSLRTCRRAQWEIREMAKRMLSAARERAPLLFETAGPGCVRGGCPEGKMSCGSPA
                     EVRREIASLGKGAGA"
BASE COUNT          323 a          710 c          661 g          305 t
ORIGIN      
        1 ggaccatgac cttcatcgcg ggatcgttct cgccgtcctg gagagcgcgg ttgtcggcga
       61 gctcctgctc gatcttccgg taccgggagt gggccaccgc cactggccgc agttcggcga
      121 gttcccgccc gatcctctgc atctctcgcg ggttccccgt gaccgacggg tccgacagca
      181 gccgctccag ctcgggtatc cgcgccacga ccgattcgag cttatcccac aagggaggcc
      241 tccgaccccg acggccccga cacgcgccgg aacgacgcga tcgcaacctc gatctggggc
      301 aggtccggct cccgggtggt cagacgctgc agccagagcc ccggagcgac gagcgcccgg
      361 aatcctggag accgggtctt tctcgccgac agccgcagca cctcgtagga gatccccgcg
      421 atcgcgggga tcagcgggag ccgcaggagc gccttcgcca gcagggagct ctccctcggg
      481 atcagggaga agacgaggat gctgatcacc atgacgaaca ggaggaagct ggtgccgcac
      541 cgggggtgca ggcgcgggta ctcccgcacc gcttcgggcg agagatccgc cttcgcctcg
      601 taggcgttga tcaccttgtg ctccgcgccg tggtactcga agacccttcg tatgtccttc
      661 atccgcgtga tcccgacgat gtacaggacg aagatcagca cccggatcgc accgtccgcg
      721 aggttgaagg cgatcgaccc ccggagggcg gggaccaggc cggccaggag atgggtcgcg
      781 tacagcggga tgaggaaaaa gaggccgacc cccaggagaa gcgccatcgc catggcgccc
      841 gccatggcca gccccccgga cttcgctcct tcccccgtga ccttcgcggc atcgggtgcg
      901 ccttccgcgt cctccatcgc ctcgtccgcc gagtattgca gggcgcggta cccgatcgcc
      961 agcatcgccg ccatcgtcac caccccgcgc accaggggga tcttcgcgat ccgcttcctc
     1021 gccgccgatt ccacgagggg gaagtcacgg acccggatct ccccgctggc cttccgcacc
     1081 gcgaccgcat acgccagcgg ccccttcatc atcacgccct cgatgaccgc ctggccgccg
     1141 agaacgagtt ccgcaggttc cgggggcatc atgcgccggc ccccttcccg agggacgcga
     1201 tctcccggcg gacttccgcc gggctgccgc agctcatctt cccttccggg cacccgcccc
     1261 gtacgcagcc gggtcctgcg gtctcgaaca gcagcggcgc ccgctccctc gcggccgaga
     1321 gcatccgctt cgccatctcg cggatctccc actgcgccct gcggcacgtg cgaagggaga
     1381 agaaatggtg cagttcacgc gcgttcatcg tgatcaggat cttcgtttcc gtcgcgttgg
     1441 gaagggcgaa gcgcgcgtcc tccggcggga cgccggcctt catcaatttc gcgtagagcc
     1501 gggagcaggc cgccatatgg cgctcgtacc cggccagcag atcgggggaa gccgcgacgg
     1561 tcgggggggt gacgtacccg aacttcgctg cgacgtaccg ctggctctgc tgggaatacg
     1621 aggcgatgcg gtggcggacc agctggtgcg aggcggcgcg ggagatcccc tcgacgccgt
     1681 aggtgagggt cacgtgctcg aggacggagg cgtgccccat cgagaggacc cgccggacga
     1741 ggttcctcgc gtcacgacgg gagatctcct cccggagttc accgatcgac gcgggggagt
     1801 agcacagccg cgccgcgagc gcgacgacgc gctccgggtc gggggtgcac gtgagcagcg
     1861 agacgttcac ggccggaagg tgccccccgt aagctgattg ctccatttca taaatagcac
     1921 gacagcattc gcgtaccggc cactcccgag cgcagtcgtg cccctcatgt cgaacggggg
     1981 gtaccccagg gagcgcgtt
//
LOCUS       DATGYW010000645         1646 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_95816, whole genome shotgun sequence.
ACCESSION   DATGYW010000645 DATGYW010000000
VERSION     DATGYW010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95816"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1499
                     /locus_tag="VK429_09025"
     CDS             <1..1499
                     /locus_tag="VK429_09025"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN91985.1"
                     /translation="DRPIHALLIEDNPGDARLIGEMMAEAGNGSSRMKWADRLGTGLQ
                     ALIEGEIDIVLLDLALPDSQGIDTLSAVRTAAPGVPVVVLTGLDDENAAMESLRQGAQ
                     DYLVKGKFDGVLLLRSIRYARERKRIEKTLRESEERFRTKVENSFVGIFIVRNGRIVF
                     RNPEQKRLFGEIPEFFMLREFHDIHPEDRKKFSALCDAIDSGETIKPETDLRFYPYGM
                     GAEGVEMRWVLIRTSPIRYEGQGAVLVNMVDITRSKEVEHNAMIREKMAVLGHAISGI
                     AHEIRNPLSGINIHLSVLEKLHQQADGLGEEEREEAKRITDDIKSASFRIEDVIKKVM
                     DFSKPSAFRLKRADINTAVEEAIDFSLGMLRKRGITLDRSGIGKLPKCMADRRLFTQV
                     LLNLITNAAEAMENSEKEKVLAVSISQEGGRAVIRVADSGPGVPPHLREKVFDPFFTT
                     RQDGYGIGLNFSRRVIAGHRGSIKIGESRWGGAEFRIELPIPKEEGPG"
BASE COUNT          343 a          446 c          561 g          296 t
ORIGIN      
        1 acgatcgccc gatccatgcg ctcttgatcg aggacaaccc gggggatgcc cggctgatcg
       61 gtgaaatgat ggccgaggcg ggaaacggtt cgtcccggat gaaatgggcg gatcggctcg
      121 ggacaggcct ccaagcgctc atcgaagggg aaatcgacat cgttctgctg gacctcgcgc
      181 tcccggacag ccagggaatc gatacgctgt cggccgtgcg gacagccgct cccggcgtcc
      241 cggtcgtggt gctcaccggc ctggacgacg aaaatgcggc gatggagagc cttcgtcagg
      301 gtgcgcagga ttacctggtg aaggggaagt tcgacggcgt gcttcttctg cggtcgatac
      361 ggtatgcgcg ggagcggaag agaatagaga agaccctccg ggaaagcgag gagcggtttc
      421 ggacgaaggt ggaaaattcc ttcgtgggga tcttcatcgt ccggaacggc cggatcgtgt
      481 tccggaaccc ggagcagaag cggcttttcg gggagattcc cgagttcttc atgctccggg
      541 agtttcatga cattcatccc gaagaccgga aaaaattttc agccttgtgc gacgcgatcg
      601 attccgggga gacgatcaag ccggagacgg atctcaggtt ttacccgtac ggaatgggag
      661 ccgaaggggt ggagatgcgt tgggtgctga tccggaccag cccgatccgg tacgaagggc
      721 agggggccgt cctggtgaac atggtggata ttacccggtc caaggaggtg gagcacaatg
      781 ccatgattcg ggagaagatg gccgtcctgg gccacgcgat ctccgggatc gcccacgaga
      841 tccgcaatcc cctctcgggg atcaacatcc atctctccgt gctggaaaag cttcaccagc
      901 aggcggatgg cctcggcgag gaggagaggg aggaagcgaa aaggatcacc gatgacatca
      961 agtccgcctc cttccggatc gaggacgtca tcaagaaggt gatggacttc tccaaaccga
     1021 gcgcattccg cctgaaacgg gcggacatca acacggcggt cgaggaggcg atcgatttct
     1081 cgctggggat gctgcgcaag cgggggatca ccctggaccg ctccgggatc gggaagctgc
     1141 cgaaatgcat ggcggaccgt cgcctgttca cccaggtgct attgaacctg atcaccaatg
     1201 cggcggaggc gatggagaat tcggaaaagg aaaaggttct cgcggtttcg atctcccagg
     1261 aggggggtcg ggccgtgatc cgggtcgccg attcgggacc gggagtgcct ccccatctgc
     1321 gggagaaggt cttcgatcct ttcttcacca cacgacagga cgggtacggg atcgggttga
     1381 acttcagccg tcgggtcatc gcaggccacc gggggtcgat caagataggg gaaagccgtt
     1441 ggggcggggc ggagttccgg atcgagctcc ccatcccgaa ggaggaaggt cccggatgat
     1501 gccctgcccg atctcctcgg cgggcgacga gccgggcagg gaattccttt aatatgatac
     1561 agttcgttcg ggacaatccg taacgtcacg tcgcagcctg accagcggga tgccggaatg
     1621 ctagtttccg ccatcccggt ccatgt
//
LOCUS       DATGYW010000646         1505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_153128, whole genome shotgun sequence.
ACCESSION   DATGYW010000646 DATGYW010000000
VERSION     DATGYW010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153128"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            53..1505
                     /locus_tag="VK429_09030"
                     /pseudo
     CDS             53..1505
                     /locus_tag="VK429_09030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018483148.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glucosidase"
BASE COUNT          313 a          505 c          453 g          234 t
ORIGIN      
        1 agtgtctgcg gcctgtattt attaacagta ctcgggccgt aacgagcaag gcggtgacgc
       61 ctggaatttc ttcacccacg atcatgcccg ctcgcgggcc taccgctggg gcgaggacgg
      121 catcgccggc atttccgacg acaagcagca cctgtgcttc gcgctggcct tgtggaacgg
      181 gaaggacccg attctaaagg aacggctctt cggcctgacc aacagcgaag ggaaccacgg
      241 cgaggacgtc aaggaatact acttctacct cgacagcacg ccgacccact cgtacatgaa
      301 gtacctctac aagtacccgc aggcggcctt cccctacgcc gacctggcgg agacgaaccg
      361 tcgccgcacc cgggacgaga tggagtatga actcctcgac accggcgtct tcaacgacga
      421 caggtacttc gacgtcttcg tcgagtacgc aaaggatggt ccggaagaca tcctggtccg
      481 gatcaccgcg gccaaccggg gaccggacgc ggcggaactg catctcctgc cgacgctctg
      541 gttccgcaac gactgggcgc cgtggatcgc cgaggtcagc agggccgccc ataaaccgaa
      601 cctccggcag atcgacgcgg cggcgggcac aagcgcggcc gcggcaacgg atccggcgct
      661 gggggagtac accctctgct gcgaaggcga ggtgccgctg ctcttcacag aaaacgaaac
      721 gaaccacgag aggctcttcc ccggacagaa gaacgacact ccctacgtca aggacggcat
      781 caacgactgc gtggtgcagg gcaaccagag cgcggtgaat cccgaaaagc ggggcaccaa
      841 ggtcgcggcg tactatcgac tggaagtcgg ccccggccag tcggcgaccg tgcggctgcg
      901 ccttaccgga ccggccgctg ccggcaagag tggggaaaca aaaaccaccc catcctggtt
      961 cggcatggag tttgaaaaga ctctggccgt ccggcttcag gaggcggacg cgttctaccg
     1021 gtcggtgacc ccgccttcca tctccccgga cgcggccaac gtgatgcgcc aggccatcgc
     1081 cggcatgctg tggagcaagc agttctactt cttcgacggc gacaactggc tggacgagca
     1141 ccactccaac cccctccatt ccggatatcg tgcctcccgg aactcggagt ggttccacat
     1201 ggtaaacgag gacatcatct cgatgcccga caagtgggag tacccctggt acgcggcctg
     1261 ggacctggcc ttccacacgc tcccgctcgc gatcgtggac cccgacttcg ccaaggacca
     1321 gatggagctg atgctgcgcg gggtctacct gcaccccagc ggccagatgc ccgcctacga
     1381 gtggaacttc agcgacgtga accccccggt ccacgcctgg gcgaccctct tcctgcaaca
     1441 caccgagcag gccctgcacg gcgagacgga cgttgagttc ctcaagtcgg cgttcaacaa
     1501 gctgc
//
LOCUS       DATGYW010000647         3004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_361471, whole genome shotgun sequence.
ACCESSION   DATGYW010000647 DATGYW010000000
VERSION     DATGYW010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3004
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361471"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..2082)
                     /locus_tag="VK429_09035"
     CDS             complement(55..2082)
                     /locus_tag="VK429_09035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013909515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HLN91986.1"
                     /translation="MLGALKKKGYRKVLKTLRDGKAIWLTNTGPRDTGQSDFKNRFTL
                     HDLSRLMPVYDASGYFSIEVHGGARLHQNLMNNMIHPFEEARLFSARMPNVLTQTLIR
                     STNVWGYRMYPRNIVRLAVESFLPSIDVWRCFDFLNYVPNMAPVAEEVLRGGKIFSPA
                     ISFTEAPECSDAYYLRVLKEIVSLCGGTRDIILCVKDMAGVGSPARIRRLIDAFLQKY
                     PGLVIQYHRHSTDGLVIPAIAEAAAAGAKLFDVTDDAFSRFYGHPPVRPLVRYLRELG
                     YDVRLDMKRADEASDAIRGFIRGYGRFESQFKGFSSDVTVHRMPGGAFPSSFEQAEKG
                     GFLDLMPHILKGMSYGNRIIKYFDVTPGSQITWTTWAGILQRTHKEAGEHGIRRLFSI
                     LERFFESGERLEALSQADENLLLRLYAGATDDLKNLLLGKYGPLPFGWPKEWVYRSVF
                     GEEGAAKAKAERVESSPLSRLADEDLEKSRATMEAELGRPATQEEFVLYLMHPKATVD
                     FLKFRQRFGDTTILPTGVWFHGLRKPGDQVTITIGSKPHEIRLVSIGEGVGGVKHVVL
                     SVDNIMHVFPVELPEAAAARKAIRKASPGNKGEVGATVTGTVWRIGTKDRVLKEGDRL
                     RKGEEVMNIEVMKTENAVKSHLAGVIRELCVKVNDRVEEGQLLAVIDPGAE"
     gene            complement(2093..>3004)
                     /locus_tag="VK429_09040"
     CDS             complement(2093..>3004)
                     /locus_tag="VK429_09040"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF014805.4"
                     /note="catalyzes the ATP-dependent carboxylation of a
                     covalently attached biotin and the transfer of the
                     carboxyl group to pyruvate forming oxaloacetate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HLN91987.1"
                     /translation="EVEEGLAAARSVAEKAFGRGTVFVEKFIEGGRHIEFQFLADRYG
                     NVIHLGERECSIQRRHQKLVEEAPSSLLTPEVRAKMGAVVVKAMKDIGYETAGTLEFL
                     VDKSGKFYALEVNTRIQVEHTVTEMITGFDIIRKMYKIAAGDRLSLRQQDVLLRGHAI
                     QCRINAEDPKNGFAPSFGRITFLRQISGPFIRTESGIYQGWEVPSFYDSLLAKICSVG
                     KDRGTAIERMRRALREYDIWGVRTTIPLLRRIMDQPDFVAGKIHTGFIDENIAGLTEY
                     EEVEEEIYKAARFVAEVSGLGRNVHSG"
BASE COUNT          463 a         1027 c          970 g          544 t
ORIGIN      
        1 aaagcgcccc ccggagagcc gcgaagaacc gttccatgtc gtgatttccg cggttcattc
       61 ggcccccggg tcgatcactg cgaggagctg cccctcctcg acccggtcgt tcaccttcac
      121 gcacagctcg cggatgacgc ccgccagatg ggatttcacg gcattctcgg tcttcatcac
      181 ctcgatgttc atgacctcct cgcccttgcg gaggcggtcc ccttccttca gcacccggtc
      241 cttcgtcccg atccgccaca ccgttccggt gacggtcgcg ccgacctccc ccttgtttcc
      301 cggtgacgcc ttccggatcg ccttgcgcgc cgccgcggct tccggaagct ccacggggaa
      361 gacgtgcatg atgttgtcca ccgacagaac gacgtgcttc accccgccca ccccctcgcc
      421 gatggagacg aggcggatct cgtgcggctt gctcccgatg gtgatcgtca cctggtcgcc
      481 cggcttgcgc aggccgtgga accagacgcc ggtggggaga atggtggtgt cgccgaaccg
      541 ctgccggaac ttgaggaagt cgaccgtggc cttcgggtgc atcaggtaca ggacgaactc
      601 ttcctgcgtg gcgggccgtc ccagctccgc ctccatcgtc gccctcgact tttcgaggtc
      661 ctcgtccgcg aggcgcgaca gcggcgacga ttcgacccgc tcggccttcg ccttcgcggc
      721 cccctcctcg ccgaagacgc tccggtagac ccattccttc ggccagccga acgggagcgg
      781 gccgtacttc ccgagcagca ggttcttcag gtcgtccgtc gcccccgcgt agagccgcag
      841 gagcaggttc tcgtccgcct gggagagcgc ctcgagccgc tcgcccgact cgaagaatcg
      901 ttccaggatg gagaagagac gccggatgcc gtgctccccc gcctccttgt gggtgcgctg
      961 gaggatcccc gcccacgtgg tccacgtgat ctgcgatccc ggggtgacgt cgaaatactt
     1021 gatgatccgg ttcccgtacg acatcccctt caggatgtgg ggcatgaggt cgaggaagcc
     1081 ccccttctcc gcctgctcga aggaggaggg gaaggcgccg cccggcatcc ggtggacggt
     1141 cacgtcgctg ctgaacccct tgaactggga ctcgaacctc ccgtagcccc ggatgaagcc
     1201 gcggatcgcg tcggacgcct cgtcggcgcg cttcatgtcg agccggacgt cgtacccgag
     1261 ctcgcgcagg tagcgcacga ggggccgcac cggcgggtgg ccgtagaagc gggagaaggc
     1321 gtcgtccgtc acgtcgaaga gcttcgcccc cgccgcggcc gcctccgcga tcgcggggat
     1381 caccagcccg tccgtggagt gccggtggta ctggatgacc agtcccggat acttttgcaa
     1441 gaaggcatcg atcagccgcc ggatccgcgc cggggagccg acgccggcca tgtccttgac
     1501 gcacagaatg atgtccctcg tgccgccgca cagggagacg atctccttca gcacccggag
     1561 gtagtaggcg tccgagcact ccggggcctc ggtgaaggag atggcgggcg agaagatctt
     1621 cccgccgcga agcacctcct cggcgaccgg cgccatgttc gggacgtagt tcaggaagtc
     1681 gaagcagcgc cacacgtcga tcgaggggag gaacgactcg accgccagcc gcacgatgtt
     1741 gcgcgggtac atccggtacc cccagacgtt cgtcgaccgg atgagcgtct gggtcaggac
     1801 gttcggcatc cgcgcggaga agagccgcgc ctcctcgaac gggtggatca tgttgttcat
     1861 caggttctgg tggaggcggg ccccgccgtg gacctcgatg gagaagtacc ccgaggcgtc
     1921 gtagaccggc atcaggcggg acaggtcgtg aagggtgaac cggttcttga agtcgctctg
     1981 gccggtgtcg cgcgggcccg tgttcgtcag ccagatcgcc ttgccgtccc ggagggtctt
     2041 gaggaccttc cggtaccctt tcttcttcag ggcgccgagc atcccgcccc cgtcacccgc
     2101 tgtggacgtt gcggcccagg ccggagacct cggcgacgaa gcgggccgcc ttgtagatct
     2161 cctcctcgac ctcttcgtat tcggtgagcc ctgcgatgtt ctcgtcgatg aacccggtgt
     2221 ggatctttcc ggccacgaag tcgggctggt ccatgatccg ccgcagcagc gggatcgtcg
     2281 tccggacgcc ccagatgtcg tactcccgca gggcgcgccg catccgctcg atcgcggtcc
     2341 cccggtcctt ccccacggag cagatcttcg cgagcaggga gtcgtagaac gaggggacct
     2401 cccacccctg gtagattccc gactcggtcc ggatgaaggg gccgctgatc tggcgaagga
     2461 aggtgatccg cccgaaggag ggggcgaagc cgttcttcgg gtcctcggcg ttgatgcggc
     2521 actggatcgc gtggccgcgg aggagaacgt cctgctgtcg cagcgacagg cggtcgcccg
     2581 cggcgatctt gtacatcttc cggatgatgt cgaacccggt gatcatctcg gtgacggtgt
     2641 gctccacctg gatccgcgtg ttgacctcga gggcgtagaa cttgccgctc ttgtcgacga
     2701 ggaattcgag cgtcccggcc gtctcgtacc cgatatcctt catcgccttg acgaccaccg
     2761 cccccatctt cgcacggacc tcgggggtca gcagggagct gggagcctct tccaccagtt
     2821 tctggtgtcg ccgctggatg gaacattccc gttcgcccag gtggatgacg ttgccgtacc
     2881 ggtccgcgag gaactggaac tcgatgtggc ggccgccctc gatgaacttc tcgacgaaga
     2941 cggtccccct gccgaacgcc ttctcggcca cggagcgcgc ggcggccagg ccttcttcca
     3001 cctc
//
LOCUS       DATGYW010000648         2723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_361643, whole genome shotgun sequence.
ACCESSION   DATGYW010000648 DATGYW010000000
VERSION     DATGYW010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361643"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="VK429_09045"
     CDS             <1..281
                     /locus_tag="VK429_09045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91988.1"
                     /translation="YGLDNNADRQVDSWDLTMAGMTADQIRSQLVEVQVYILAQQGQR
                     DDSYLYPNPTVYVGDLAIGGGRYFDVSLYRNYRWKLYSIVVKPRNLAN"
     gene            283..840
                     /locus_tag="VK429_09050"
     CDS             283..840
                     /locus_tag="VK429_09050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91989.1"
                     /translation="MKTLRNEKGFALVFVLILAAIALVMTLGMLFMVSRGSYVSGQQK
                     RYRTAVEAGRGGVESMLQLVSSRGIAATYMTVDNQAVLNAKLGTPTTEWIGLDNAITI
                     NPAVPSTYDMRVDLGTYRVYSKIVDTVRGNSGASEVLLNKGVVSLSPGEVAVVSIPYL
                     YTIEVLSQSRTNTTERSKFSILYQY"
     gene            846..1589
                     /locus_tag="VK429_09055"
     CDS             846..1589
                     /locus_tag="VK429_09055"
                     /inference="COORDINATES: protein motif:HMM:NF037016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative Ig domain-containing protein"
                     /protein_id="HLN91990.1"
                     /translation="MSGDRILPVFFALFLLAGCSGDRKAPAPAPSPSVGNVVTPTAQQ
                     DGGSPVVGEPARAAGAVDRNTPPVIRNFRFIHADEKAGTGLRVLVEGHDADGDAVQFH
                     IAWRKNGDPAGSGDRLTAPLKRGDKVTVTVTPFDGKDRGESVTLSREILNAAPVIEGQ
                     ERFQVSDDAVVFHVQASDPDGDLLTYSLKDAPTGMSIDRGTGWVRWVTSPGTTGKVPF
                     TVIVSDGAGGESTARFTVTVTEQPSTGTQ"
     gene            1616..2080
                     /locus_tag="VK429_09060"
     CDS             1616..2080
                     /locus_tag="VK429_09060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003288003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HLN91991.1"
                     /translation="MERTRKRREGGFSLLEVFVALLILSLGILFLAMGQLTALTAKAP
                     FISSNARVATDLAQEAIDRLFQTPLGELRSSHPDGFESGTGGVSPAFSRLAASSGDSV
                     TVQGTTFYRVWQVTPDPEIPNLKTITVWCCWRSGKSSWRQTMLVSQRADAGY"
     gene            2112..2546
                     /locus_tag="VK429_09065"
     CDS             2112..2546
                     /locus_tag="VK429_09065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN91992.1"
                     /translation="MLSMLLLVVLSALGMYLVSVPVGTGESSRRHHRAAVARNMARAG
                     ANAAIARFPLVSPGGSPYVRRIPVGLNVTGRYSVTSLKDGAEFVHGSGSGSGFEEYDL
                     VSVGSVTDLPAEDVRVVARIRYGFDSQGRKAHILKWEEFGPR"
BASE COUNT          528 a          771 c          897 g          527 t
ORIGIN      
        1 tctatggcct cgacaataac gccgaccggc aggtggacag ttgggacctc acgatggcgg
       61 ggatgaccgc ggatcaaatc cgcagtcagc tcgtcgaggt ccaagtgtac attttggcgc
      121 agcaaggaca gcgggacgac agctacctgt atccgaatcc aacggtttac gtgggagacc
      181 tagccattgg agggggaagg tacttcgatg tgagcttgta ccggaactac cgctggaagt
      241 tgtattccat cgtcgtcaaa ccgaggaacc tggcgaactg acatgaagac acttcgaaac
      301 gaaaaagggt ttgcgctggt ctttgtcctg atccttgcgg cgatcgccct cgtgatgact
      361 ctcggtatgc tgttcatggt gagccggggc tcctacgtct caggtcagca gaagcggtat
      421 cgcacggccg tggaggcggg acgcggcggg gtggaatcga tgctgcagct ggtctcgagc
      481 cgcgggatcg ccgcaaccta catgacggtt gacaaccagg cagttcttaa cgcgaaactt
      541 ggcactccga caaccgaatg gatcggactg gataacgcca ttacgatcaa cccagccgtt
      601 ccctcgacgt acgacatgcg ggtggacctc gggacgtaca gggtttattc gaagatcgtg
      661 gacacggtgc gagggaactc gggggcgagc gaagtgttgc tcaataaggg tgtcgtgagc
      721 ctcagtcccg gcgaggtggc tgttgtgagc atcccgtacc tgtacacgat cgaggtcctg
      781 tcccagagcc ggacgaacac gaccgaacgg tcgaaattct ccatccttta ccagtattga
      841 tgcgcatgtc tggagatcgc atcctccctg tcttcttcgc actgttcctt ctcgcggggt
      901 gttccggcga ccggaaggcg cctgctccgg caccatctcc atcggtgggg aatgtggtca
      961 ccccgacggc gcagcaggac ggaggatccc cggttgtagg ggagccagca cgtgcggcgg
     1021 gtgccgtgga ccggaacact cccccggtga tccgaaattt ccggttcatc cacgcagatg
     1081 aaaaggcagg gaccggcctt agggttttag tggaaggaca cgacgccgac ggagacgcgg
     1141 tgcagttcca catcgcatgg agaaagaacg gggatcctgc gggcagcggg gaccgcctga
     1201 cggcaccgct caagcggggc gacaaggtca ccgttacggt cacgccgttc gacggcaagg
     1261 atcgaggaga gtccgtcacg ctttcccggg agatcttgaa tgccgctccc gtcatcgagg
     1321 gacaggagcg gtttcaggtc agcgacgacg cagtcgtatt tcatgtccag gcgtccgatc
     1381 cggacggcga tctgttgacg tattccttaa aggacgcgcc caccgggatg agcatcgatc
     1441 gtgggacagg gtgggtgcgc tgggtgacat ccccagggac gaccgggaag gtcccgttca
     1501 cggtcatcgt gtccgatgga gcgggcgggg agtcaacagc acgctttacg gtgacggtaa
     1561 cggaacaacc ttccactggc acccaataag atcggccgga acacgggacc ggggattgga
     1621 aagaacacga aagaggaggg agggcggatt ctctctcctg gaggttttcg ttgccctcct
     1681 gatcctctcg ctgggcattc tgtttctggc gatgggtcag ttgaccgccc tcaccgcaaa
     1741 ggcccccttc atctcctcga atgcgcgcgt ggccaccgac cttgcccagg aggcgatcga
     1801 tcgtcttttc cagactccct tgggcgaact tcgctcctcg catcccgacg gcttcgagtc
     1861 gggcacggga ggagtgtcgc cggccttttc ccgccttgcg gcatcgtcgg gagattccgt
     1921 aaccgtccag gggacgacgt tctatcgggt ctggcaagtg acgccggacc cggagattcc
     1981 caacctgaaa acgatcaccg tatggtgctg ctggcgttcg gggaagagtt catggcggca
     2041 gacgatgctc gtgtcacagc gagcggatgc ggggtactga cgcaatggac aggcgtcggg
     2101 gaagcgcgat cgtgctctca atgcttctcc tggtcgtcct gagcgcgctc gggatgtacc
     2161 tcgtatccgt ccccgtcggc acgggagaga gttccaggcg ccatcatcgg gctgcggtgg
     2221 cgaggaacat ggcgagggcc ggtgcgaatg ccgcgatcgc gcggtttccc ctggtgagcc
     2281 ctggcggttc gccgtacgtt cgacggattc ccgtggggct gaacgtgacc ggacgatatt
     2341 cggtaacctc gctgaaggac ggcgcggagt tcgtgcacgg ttccggcagt gggtcgggct
     2401 tcgaggagta cgacctggtc tccgtgggaa gtgtgaccga tcttcctgcg gaagatgtgc
     2461 gtgtcgtggc gaggatccga tacgggttcg attcccaagg gaggaaagcc cacatcctca
     2521 aatgggaaga gttcgggccc cgctgacctt cttcgttgtg ccctgatccg caggggctcg
     2581 aaaaagggaa tcgacgcggc ttccccctct cgcttatagt aggttccgtc atgggaaacc
     2641 gaagaaagac ccgacgcatc cgtgtcggcg gcgtgccggt gggcggcggc gcgcccgtct
     2701 tagtccagag catgacgaac acc
//
LOCUS       DATGYW010000649         1691 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_361774, whole genome shotgun sequence.
ACCESSION   DATGYW010000649 DATGYW010000000
VERSION     DATGYW010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361774"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..336)
                     /locus_tag="VK429_09070"
     CDS             complement(<1..336)
                     /locus_tag="VK429_09070"
                     /inference="COORDINATES: protein motif:HMM:NF014762.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron dependent repressor, metal binding and
                     dimerization domain protein"
                     /protein_id="HLN91993.1"
                     /translation="MTEYGQDEILELLWTLREERKASRAEVLRTSPEPGPERLIDELV
                     EGGMVDVSGEEILLTRSGEERARGIIRRHRLAEVLLQNLFDLDNTQIENSACQFEHIL
                     SEPVVESVCT"
     gene            complement(538..>1691)
                     /locus_tag="VK429_09075"
     CDS             complement(538..>1691)
                     /locus_tag="VK429_09075"
                     /inference="COORDINATES: protein motif:HMM:NF019292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nucleoside recognition domain-containing
                     protein"
                     /protein_id="HLN91994.1"
                     /translation="SSKKVAQAFGRYAMDPVYGFPILLGVLALAYGFVGVFGAGYLVD
                     LLQKSFFEGWVIPSVAAVLDRFVPSPFLRDFLVGPYGMISMALSYAVAIVLPIVGTFF
                     LGFGILEDSGYLPRLAVMVDRLFKKIGCNGKAVLPMILGLGCDTMATLTTRILETRKE
                     RVIITLLLALGVPCSAQLGVILGMLSDVGPVATITWAGLMAGVILAVGFLASRVIPGE
                     SSDFILEIPPIRRPQLGNLGIKTMARIEWYLREAVPLFLVGTLVLFIADRFGWLVRIQ
                     SAAEPVVVRLLDLPPKATEAFLIGFLRRDYGAAGLFSMAKGGMLSHLQVVVSLVTMTL
                     FMPCLANLLVIVKEHGAKVAIAMSLFIFPFAVLVGAAVNYFSRWAGITF"
BASE COUNT          372 a          555 c          505 g          259 t
ORIGIN      
        1 ggtgcacacg ctctcgacca cgggctcgga gaggatatgc tcgaactggc aggcgctgtt
       61 ttcgatctgg gtgttgtcca gatcgaacag attctgcaga agcacctccg cgagtcggtg
      121 ccgccggatg atcccgcggg cgcgttcctc tccgctcctt gtcaggagga tctcctcccc
      181 cgaaacatcg accatgccgc cctctaccaa ctcatcgatg agtcgttctg gacccggctc
      241 cggcgaggtg cgcagcacct ccgcacgact cgctttccgc tcttcccgaa gggtccagag
      301 aagctcgagg atctcgtcct ggccgtactc ggtcatttcc ggattccttt cgcgaaaagg
      361 cccttcacga agttcaccac cttcgactcg ggcatgggga aagagtatcc gcatcgcggg
      421 caacagacaa gcgtgcatcc tttactcatg gggcaccctg agcggcaggc cctgtccgtc
      481 gggtcgatct cgcactggca gagtgggcat cggatgatca cgttgttccc ccccggatca
      541 aaaagtgatc cccgcccacc gcgagaaata gttcaccgcc gcaccgacaa gaacggcgaa
      601 gggaaagatg aagagggaca tcgcgatcgc caccttcgct ccgtgctcct tgacgatcac
      661 gaggaggttc gcgaggcacg gcatgaaaag cgtcatggtg acaagactca ccaccacctg
      721 gagatgtgag agcatcccgc ccttcgccat gctgaacagc cccgccgccc cgtagtccct
      781 gcgcaggaag ccgatcagga acgcctccgt cgccttcggc ggcaggtcga gcagacggac
      841 gaccaccggt tccgccgcgg actggatccg caccagccat ccaaagcggt ccgcaatgaa
      901 aagaacgagg gtgccgacga ggaaaagggg aaccgcctcc cgaagatacc attcgatccg
      961 cgccatcgtt tttatgccga ggttccccaa ctggggacgg cgtatgggag gaatctcaag
     1021 gatgaagtcc gacgactcgc cgggaatcac cctcgacgcg aggaagccga cggcgaggat
     1081 gacccccgcc ataaggccgg cccaggtgat cgtcgcgacc gggccgacgt ccgacaacat
     1141 tccgaggatc acgcccagct gcgccgagca cggcaccccc agcgccagca gcagcgtgat
     1201 gatcacccgc tccttgcgcg tctccaggat ccgagtggtc aaggtcgcca tcgtgtcgca
     1261 tccgagcccg aggatcatcg gaagcaccgc cttgccgttg cagccgatct tcttgaaaag
     1321 gcgatccacc atcaccgcga gccggggcag gtagccggag tcctccagga tcccgaaccc
     1381 gaggaaaaag gtacccacga tcgggaggac gatggcgacc gcgtaagaga gggccattga
     1441 gatcatccca tacggcccca ccaggaaatc ccgaaggaac ggcgaaggaa cgaaccggtc
     1501 gaggaccgcg gcgacggagg ggatgaccca cccttcgaag aacgacttct gcaggaggtc
     1561 gacgagatat ccggcgccga acaccccgac gaagccgtag gcaagagcca ggacgcccag
     1621 caggatgggg aacccgtaaa cagggtccat cgcgtaccgg ccgaacgcct gcgcgacctt
     1681 tttcgaggaa g
//
LOCUS       DATGYW010000650         1639 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_204870, whole genome shotgun sequence.
ACCESSION   DATGYW010000650 DATGYW010000000
VERSION     DATGYW010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204870"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1047)
                     /locus_tag="VK429_09080"
     CDS             complement(<1..1047)
                     /locus_tag="VK429_09080"
                     /inference="COORDINATES: protein motif:HMM:NF025042.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate-2-kinase family protein"
                     /protein_id="HLN91995.1"
                     /translation="MSPREKDRLLSAFRAAVDAVAPARLVASALRVEGDAVVLDAAGV
                     RAAVPLSSLRKIHLVGAGKAGRAMGEAALAALGKRVADGVIAVPRSAEGPSGPVRFAA
                     AGHPVPDIFSLSAAREILSLLERAGKGDLVVALVSGGGSAMLSSPAAGITMEEKAETF
                     RLLLMAGADIASFNAVRKHLSEVKGGLLARAAQPATVWALLLSDVPGDDPSVIASGPF
                     SPDPTTYADAIGVLERYGIYYAVPSPVRRHLAEGAGGALPETPKQDDPAFLGTTSVLV
                     GTNRTAMDGAALKLARESDAGPTAIVLLPGFLRGEARECARSFCTRLRKAAEALSPGH
                     AIAIIAGGETTVNVA"
     gene            complement(1119..>1639)
                     /locus_tag="VK429_09085"
     CDS             complement(1119..>1639)
                     /locus_tag="VK429_09085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015722020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HLN91996.1"
                     /translation="AKEIDFSYTYFLTGQKFLTKKGKVKTLKDFEGKKIATAKGSTSE
                     QNVKTAVPYATVLSLDDYPQGVLALQQGKVIAVTTDESILAGQLGMLEKKSATRGKYE
                     IPDIQISMEPYGLGMRKGDTNFVKFVNDTLLEMEKNGDAKKIFAKWFGPKTDSPISRG
                     NFMITADRMGLE"
BASE COUNT          253 a          577 c          531 g          278 t
ORIGIN      
        1 ggccacgttc accgtcgtct ctccgccggc gatgatcgcg atcgcgtgtc ccggcgaaag
       61 ggcctccgcg gccttccgca accgggtaca gaacgaacgg gcgcattccc tcgcctctcc
      121 tcgaaggaat ccgggcagga ggacgatcgc ggtggggccc gcatccgact cccgtgccag
      181 cttcagcgcc gccccgtcca ttgccgtccg gttcgttccg acgagcaccg aggttgtccc
      241 gaggaaggcg gggtcgtcct gtttcggggt ttcgggaagg gcgccgcccg cgccctcggc
      301 aaggtggcga cgcaccgggg aggggaccgc gtaatagatg ccgtaccgct cgaggacccc
      361 gatcgcgtcc gcatacgtcg tcgggtcggg ggaaaagggg ccggaggcga tcacggacgg
      421 gtcgtcgccg gggacgtccg acaggagcag cgcccatacg gtcgcgggct gcgccgcgcg
      481 ggcgagcagt ccccccttga cctcggagag gtgcttgcgc acggcgttga acgacgcgat
      541 gtcggccccc gccatcagga gaaggcggaa cgtttccgcc ttctcctcca tcgtgatccc
      601 cgcggccgga gaggagagca tggcggaccc gccgcccgac acgagggcga ccacgaggtc
      661 gcctttcccg gctctttcca gaagcgacag gatctcgcgc gccgccgaga ggctgaagat
      721 gtcggggacc gggtgcccgg ccgccgcgaa tcgtaccggg cccgacggcc cttccgcgct
      781 gcgaggtacg gcgatcaccc cgtccgcgac gcgtttcccg agcgccgcga gagccgcctc
      841 ccccatcgcc cttccggcct ttccggcccc gacgaggtgg atcttccgaa gggatgaaag
      901 ggggaccgcc gcccggacgc ccgcggcgtc gagcacgacg gcatcccctt ccacgcgcaa
      961 cgcggacgcg acgaggcgcg ccggggcgac ggcgtcgacc gcggcccgga aagcgctgag
     1021 cagccgatcc ttctcccgcg gactcacgcg agtcgcgtca gatcgacttg cgcaaagcca
     1081 accggcgctc cagcaaggaa cgctttccgc accgccgtct actccagtcc catcctgtcg
     1141 gccgtgatca tgaaattgcc gcgtgagatc gggctgtccg tcttcgggcc gaaccacttc
     1201 gcgaagatct tcttcgcatc gccgttcttc tccatctcca ggagcgtgtc gttgacgaac
     1261 ttcacgaagt tcgtgtcgcc cttccgcatc cccaggccgt aaggctccat ggagatctga
     1321 atgtccggga tctcgtactt ccccctggtg gcggatttct tctcaagcat gccgagctgc
     1381 cccgccagga tcgactcgtc cgtggtcacg gcgatgacct tcccctgctg caatgcgagg
     1441 accccctgcg gatagtcgtc gagggagagg acggtggcgt agggaaccgc cgtcttcacg
     1501 ttctgctccg aggtggagcc cttcgccgtc gcgatcttct tcccctcgaa atccttcagg
     1561 gtcttgacct tccccttctt cgtcaggaac ttctggccgg tgaggaagta ggtgtagctg
     1621 aagtcgatct ccttggccc
//
LOCUS       DATGYW010000651         4551 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_153745, whole genome shotgun sequence.
ACCESSION   DATGYW010000651 DATGYW010000000
VERSION     DATGYW010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4551
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153745"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            178..636
                     /locus_tag="VK429_09090"
     CDS             178..636
                     /locus_tag="VK429_09090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015145436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DOMON-like domain-containing protein"
                     /protein_id="HLN91997.1"
                     /translation="MTLRYEVRGNLSKVEIPVAAEAPRRRDRLWEETCLELFLGTADS
                     GEYWEFNLSPAGHWNVYRFTRYREGMREEPAITSLPFDVRRDSEALILTVEFGIGKIV
                     PAGKDLASTIAAVIGTTDGGRSHWALFHPSSRPDFHRRDGFGLVLPPVEI"
     gene            complement(588..1946)
                     /locus_tag="VK429_09095"
     CDS             complement(588..1946)
                     /locus_tag="VK429_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011688665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLN91998.1"
                     /translation="MRDRAERKDIERPTGELPGRRDAYKWYLVAMLWGISFFNYADRQ
                     AIFSVFPLLEKEMGLTAVQLGLLGSSFAWVYGLGAPFAGAIVDRVRRKTAILAGLHFW
                     SLVCVATALSRNFRHLFLFRAAEGLGETCYFPASMSMISDYHGKATRSRAMGLHQTSV
                     YAGTIAGGFFAGAIGQHYGWRWSFIVFGGLGVLLGFALHALLVEPKRGAADFADVGAG
                     ERAHLAARLPMREFLKVVWGTPTVLILMGAFMCANFVAVVLLSWMPKFLHDKFHMGLA
                     MAGLTATIFVQLASMASSPVGGWIADALRRRTPRGRLIVQAVGVFGGAPFVAICGMTQ
                     SVAWLVAALTAWGLFKGLYDANIFASVFDVIRPEARGTAAGFMNTVGWLAGGGSAPLV
                     IGIIAQRESLGLAIALASLVYLAAGILLLAGIFLFVKRDAAVVQDYISTGGRTNPNPS
                     LR"
     gene            2173..2724
                     /locus_tag="VK429_09100"
     CDS             2173..2724
                     /locus_tag="VK429_09100"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007042308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HLN91999.1"
                     /translation="MSQYQIAVVVGSLRKDSFNRKMADAIVKMAPPDFSFKQSQIGDL
                     PLYNQDDDAGPAESVKRLKREITASQGLLFVTPEYNRSIPGVLKNALDHASRPYGQSA
                     WAGKPAGVIGVSIGATGTSMAQQHLRNVLAYLDVPTLGQPEVFIQAKDGLFDEAGNIG
                     ANSKKFLQNWMDKYVAWVKKHAA"
     gene            complement(2901..3947)
                     /locus_tag="VK429_09105"
     CDS             complement(2901..3947)
                     /locus_tag="VK429_09105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016874362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HLN92000.1"
                     /translation="MAEKHPEALRWIQGKGEAGSPPSGRCEVGLTGKTDIELLDAYSR
                     AVTTVVEAVGPAVVSISVGRETPEGNGVEPIGAGSGVLLTPDGYVLTNHHVVRDANRV
                     QLSLTDGTILGAVPVGSDPPNDLALVRANGSGLPYAALGDSSTLKVGQLVIAIGNPLG
                     FQSSVSTGVVSATGRAMRSLDRRLIENVVQHTAPLNPGNSGGPLVDSRGRVVGINTAI
                     IAAAQGIGFSVPSNTASHVVSQILAYGKVRRGYLGLAGRQRQLSRRRVRYFDLPRESG
                     VEVASLDPDGPAGKAGVQTGDIVVRMNGQPVESVDDLHRLLSEVAVRDLTRLDVLRGT
                     ERKVLEVEIGEAAA"
     gene            complement(4263..>4551)
                     /locus_tag="VK429_09110"
     CDS             complement(4263..>4551)
                     /locus_tag="VK429_09110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92001.1"
                     /translation="GVGFGIAQAGEYRSEQPIINLEGMEAMEAVETGSLPACSYDKTL
                     CFGDNDVNPYIDVGQAREAVGTGSLPADSNADSSIIGTEEDTYRGWGIKAE"
BASE COUNT          864 a         1487 c         1407 g          793 t
ORIGIN      
        1 ggggtggcgc gacctcgcgg cggattgggc gcgcgaggag cgggcgttcg tcaggcgaag
       61 ggcgctctac ctccggtacg attgaaccct acccgatttt tcctgaaacc gttccctggg
      121 gaaaggaacc cggccggcgt aacgatcggg ggaacgatcg cgcgccgtga ggatgtcttg
      181 acgctccgct acgaggtgcg gggcaacctg tcgaaggtgg agatccccgt cgccgcggag
      241 gccccccgaa ggagggatcg attatgggag gagacgtgcc tcgagctgtt tctcggcacg
      301 gccgattccg gggagtattg ggagttcaac ctctcgccgg ccgggcactg gaacgtctac
      361 cggttcacgc gctaccggga ggggatgcgg gaggagccgg ccatcacgtc gttgccgttc
      421 gacgtccgaa gggattcgga ggcgctcatt ctcaccgtgg aattcggcat cgggaagatc
      481 gttccggcag gcaaggacct tgcgtccacg atcgccgcgg tgatcgggac gaccgatgga
      541 gggagaagcc actgggcgct gttccatccc tcctcccggc cggactttca ccgaagagac
      601 gggtttggat tggtcctccc ccccgtggag atatagtcct gcacgacggc cgcatcccgc
      661 ttgacgaaga ggaaaatgcc ggccagcagc aggatcccgg ccgccagata caccagcgat
      721 gcgagggcga tggccaggcc gaggctttca cgctgggcga taatgccgat gacaagaggc
      781 gcgctgccgc cgcccgcaag ccagccgacc gtgttcatga accccgcggc ggtgccgcgg
      841 gcctccgggc gtatgacgtc gaacacggac gcgaagatgt tcgcgtcgta gagccccttg
      901 aacagccccc aggccgtcaa ggccgcgacg agccaagcca ccgactgggt cattccgcag
      961 atcgcgacga agggcgcgcc gccgaagacc cctaccgcct gcacgatgag gcgaccgcgc
     1021 ggagtcctcc ttcgcagggc gtcggcgatc cacccgccca ccggagagct ggccatgctg
     1081 gcgagctgga cgaagatcgt cgccgtcagc ccggccatgg ccagtcccat gtgaaacttg
     1141 tcgtgcagga acttcggcat ccacgaaagc aggaccacgg cgacgaagtt ggcgcacatg
     1201 aacgccccca tcaggatgag cacggtcggc gttccccaca ccaccttcag gaattcccgc
     1261 atcggcaggc gcgcggcgag atgtgcccgc tctcccgcgc cgacgtcggc gaaatcggcg
     1321 gccccccgct tcggttcgac gagcagggcg tggagcgcga agccgagcag gaccccaaga
     1381 ccgccgaaga cgatgaacga ccagcgccac ccgtaatgct gcccgatggc gccggcgaag
     1441 aagccgcccg cgatcgttcc ggcatagacg ctggtctgat gcaggcccat ggcgcgggag
     1501 cgcgtggctt ttccgtggta atcgctgatc atcgacatgg aggcagggaa gtagcaggtc
     1561 tcgcccagtc cctcggcggc gcggaagagg aagaggtgtc ggaagttgcg ggacagcgcc
     1621 gtggccacgc ataccaggct ccagaaatgg agaccggcga gaatcgcggt ttttcggcgc
     1681 acccggtcga cgatcgcgcc ggcgaacggc gcccccaggc catagaccca ggcgaaggag
     1741 gagccgagaa gcccgagctg cacagccgta agccccattt ccttctcgag cagggggaag
     1801 actgaaaaga tggcctgacg atcggcgtaa ttgaagaacg agattcccca cagcatggcg
     1861 acgagatacc acttgtatgc gtctcttcgt ccggggagtt ctcccgttgg gcgttcgatg
     1921 tccttccgct ccgcgcggtc acgcatgtgg catccctttc ccgctgttcc ggatgacccg
     1981 gattctatcc cacggggacc gggggatgcc accgcaccgg cgatattgtt gaatcggtga
     2041 cgccaaggag tgcgtctgag gcctgacggc cccggacgcc ggttcaacgt gaccttcccg
     2101 gggtggatat tgctggtgcc gatatgtgtg gtacgctcaa aattcatcaa ctattacgtt
     2161 aaggaggtcg tcatgagcca gtaccaaatt gccgttgtcg tcggcagtct tcgcaaagat
     2221 tcattcaacc gaaagatggc tgacgccatc gtaaaaatgg cgccgccgga cttctcgttc
     2281 aaacagtcac aaatcggcga cttgccgctc tacaaccagg atgacgatgc gggcccggcc
     2341 gagtccgtca agcggctgaa gcgcgaaatc accgcttccc agggactatt gttcgtaacc
     2401 cccgaataca accgttcgat ccctggggta cttaaaaacg cgctcgacca cgcctcgcgc
     2461 ccctatggcc agagcgcttg ggcgggcaag cccgctggcg tgataggggt ttcgatcggc
     2521 gccaccggca catccatggc gcaacagcac ctgcgtaacg ttctcgcgta cctggacgta
     2581 cccacgctcg gccaacccga agttttcatc caggcaaagg acgggttgtt tgatgaggcc
     2641 ggcaacatcg gtgcgaacag caaaaaattc ctgcagaact ggatggacaa gtatgttgca
     2701 tgggtgaaaa agcacgctgc ctgaggcggt atagaaaaga aacgttaaaa aatgcagttg
     2761 gtcaccattc aggggggcag gcaaacgggg gaggtccggg gggccgagtc ggaggtcgat
     2821 cggctggtgg tgatccgcat cccggtgaca agtccccctc tcgaagaaaa aaccgttgac
     2881 cggatccgtg gtgggacagg ttacgctgct gcttccccga tctcgacctc caagaccttc
     2941 ctctccgttc cccggagcac gtcgaggcgc gtcaggtccc tgaccgccac ctccgatagg
     3001 aggcggtgga ggtcgtcgac gctttccacc ggttgaccgt tcatcctcac cacgatgtcg
     3061 cccgtctgga caccggcttt ccctgccgga ccgtcgggat cgagggaagc cacttccacg
     3121 ccggattccc gcgggagatc gaagtaccgc accctgcgcc tggacagctg cctttgccgc
     3181 cccgcgagtc cgaggtatcc cctgcggact ttcccgtagg caaggatctg cgacaccacg
     3241 tgactggccg tgttggaggg caccgaaaag ccgatcccct gggcggccgc gatgatcgcc
     3301 gtgttgatcc ccaccaccct gcccctggaa tcgaccagag gtccgccgga gttgccgggg
     3361 ttcaggggcg cggtgtgctg gaccacgttt tcgatgagac gacgatccag gctccgcatg
     3421 gcgcgacccg tggcgctgac cacgccggtg gagacgctgg actggaaccc cagcgggttg
     3481 ccgatggcga tcaccagctg gcccaccttt agcgtcgacg agtcgccgag agccgcgtag
     3541 ggcaatcccg atccattcgc gcggaccagc gccaggtcgt tcgggggatc cgaacccacg
     3601 gggaccgcac cgaggatcgt cccgtcggtg agcgaaagct gcacccggtt cgcgtcccgc
     3661 accacatggt ggttcgtcag gacgtatccg tccggcgtca ggaggacccc cgacccggcg
     3721 ccgatcggct ccacgccgtt cccttccgga gtttcccgac cgaccgagat gctgaccacc
     3781 gcggggccga ccgcctccac cacggtcgtc accgcgcggg aataggcgtc cagcagttcg
     3841 atgtccgtct tcccggtgag ccccacctcg catcggccag acggcggaga gccggcttcc
     3901 cctttcccct gtatccatcg caacgcttcc ggatgttttt ccgccaacga tctccacccc
     3961 tttctctccc attcgatgcc gggaggaaag gccgggatcc cctttacttt caagatggcg
     4021 ccgaagggga gactcgaacc cccacgggtt tccccaccaa tcccgcaggc cggggaccga
     4081 cgcgccttct gtgggggctt cccccgctcc gggccgccga tctccctgcg acatacccgc
     4141 gagccgcctt tgagcccctc ggccttgaaa cgaaaaaatc cgggcacctc atcaaggatg
     4201 cccggatgca cgcgctctgg cttgatcggt ctccttaggg accgtcgata tctccctatt
     4261 cgttattccg ccttaattcc ccaacctcga tacgtgtcct cctcggtccc gattatggag
     4321 gaatccgcat tgctatcggc aggcaaactc ccggttccca cggcctccct tgcctgcccc
     4381 acatctatgt aggggttgac atcgttgtct ccgaaacaca acgttttgtc atacgaacag
     4441 gcaggcaaac tcccggtttc cacggcctcc atggcctcca tgccttccag gtttataatc
     4501 ggttgttcag aacggtattc ccccgcctgt gcgattccga aaccgacgcc t
//
LOCUS       DATGYW010000652         1997 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_96589, whole genome shotgun sequence.
ACCESSION   DATGYW010000652 DATGYW010000000
VERSION     DATGYW010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96589"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..600)
                     /gene="purE"
                     /locus_tag="VK429_09115"
     CDS             complement(109..600)
                     /gene="purE"
                     /locus_tag="VK429_09115"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011940640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HLN92002.1"
                     /translation="MMAGKVLILMGSASDAETMRAAAEVLTDYGIPCEMTVASAHRSP
                     GRTQSLARNAEKDGFSVIIAGAGGAAHLAGCVAAETVLPVIGVPLAGSPLGGFDALLS
                     TVQMPAGVPVATVAVGKPGAQNAGHLAAQILSLSSPRLRAKIRAGRKAMANAVEEAAK
                     RLP"
     gene            complement(597..1883)
                     /gene="purD"
                     /locus_tag="VK429_09120"
     CDS             complement(597..1883)
                     /gene="purD"
                     /locus_tag="VK429_09120"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013638036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HLN92003.1"
                     /translation="MGISVLIVGGGGREHALAWKIAKSPLVSKVYAAPGNPGVARHAE
                     CVPLATDDLDGLRKFAVSKRIDLTVVGPEAPLAAGLTDLLTKEGLLVCGPDRAGAQME
                     GSKVFMKTILRKYGIPTASFKVFEEYDEAEQYLLTHRLPVVIKADGLASGKGVAVAQT
                     YEEGVAFLKDVMERRVFGAAGERVVIEECLPGEEASYIVFTDGDKFVPLPSSQDHKRI
                     GDNDTGPNTGGMGAYSPAPVVTPDVEGRVHREIFEPLLAGLRSEGIVFRGILYAGLMI
                     ELGVPRVLEFNVRFGDPEAQPLFLRLKSDLVPLLLQCARGKITDAKMEIDPRPTVCVV
                     MSSGGYPGSYEKGRPIGGIEEAEKEEGVVVFHAGTAMRDDRLVNHGGRVLGVTAIGDT
                     LKEAIARAYRAVDKIHWEGAYWRTDIGRKALARGNG"
BASE COUNT          299 a          756 c          617 g          325 t
ORIGIN      
        1 gcgtcgagga gtatcaggcg cgtcatgccg ggtgtctgcc tcgaggggct tcccgcctcc
       61 ctccgtccgc atcggacgac cgtgggatac gtcccccggg cgggcggatc atggaagccg
      121 cttcgccgcc tcttcgacgg cgttcgccat cgccttccgg ccagcccgga tcttcgcgcg
      181 aagcctcggg gacgaaaggg aaaggatctg cgccgcaagg tgccccgcgt tctgcgcccc
      241 gggctttccc acggccaccg tcgcgaccgg aacacccgcg ggcatctgga cggtcgagag
      301 cagggcgtcg aacccgccaa ggggcgaccc ggccagcggc acgccgatca ccgggagcac
      361 cgtctcggcg gccacgcacc cggcgaggtg cgccgcgccc cccgctccgg cgatgatgac
      421 cgagaacccg tccttctccg cgttgcgggc cagcgactgg gtccggcccg gcgagcgatg
      481 cgcggaggcc acggtcatct cgcacgggat cccgtagtcc gtcaacactt ccgccgccgc
      541 acgcatcgtc tccgcatcgg aggcgctccc catgaggatc aggaccttcc ccgccatcat
      601 ccgttccccc gcgccagcgc cttccgcccg atgtcggtgc gccagtaggc gccttcccag
      661 tggatcttgt ccacggcgcg gtacgcccgg gcgatcgcct ctttcagcgt atcgccgatc
      721 gcggtgacgc cgagaacgcg ccccccgtgg ttcaccaggc ggtcgtccct catcgccgtg
      781 ccggcgtgga acaccaccac gccctcctct ttctccgcct cctcgattcc cccgatgggg
      841 cggcccttct cgtagctccc cggatagccg ccggaggaca tcacgacgca gaccgtcggc
      901 ctcgggtcga tctccatctt cgcgtccgtg atcttccccc gcgcgcactg caggagcagg
      961 gggacgagat cgcttttcag gcgaaggaag agcggctgcg cctcggggtc gccgaagcgg
     1021 acgttgaact cgaggacccg ggggactccc agttcgatca tgagacccgc gtagaggatg
     1081 ccgcggaaga cgatcccctc ggaacgaaga cccgccagca gcggctcgaa gatctcccgg
     1141 tgcacccgcc cctcgacatc gggcgtcacc acgggtgcgg gggaataggc ccccattccg
     1201 ccggtgttgg gtccggtatc gttgtccccg atcctcttgt ggtcctgcga ggacgggagc
     1261 gggacgaact tgtccccgtc ggtgaagacg atgtacgacg cctcctcccc cggcaggcac
     1321 tcctcgatca cgacgcgctc ccccgcggcg ccgaataccc gccgctccat cacgtccttc
     1381 aggaacgcca ctccctcttc gtacgtctgc gcgacggcga cgcccttccc cgacgcgagt
     1441 ccgtccgcct ttattaccac cggcaaccgg tgggtaagca gatattgctc cgcctcgtcg
     1501 tactcctcga acaccttgaa ggaggccgtc gggatgccgt acttccggag gatcgtcttc
     1561 atgaagacct tggacccttc catctgcgcc cccgcgcggt ccggaccgca gacgaggagg
     1621 ccctccttcg tgagcaggtc ggtcaacccc gccgccagtg gggcctcggg gccgaccacg
     1681 gtgaggtcga tcctcttcga caccgcgaat ttccgcaacc cgtcgaggtc gtccgtcgcc
     1741 aagggaacgc actccgcgtg ccgtgcgacc ccggggttgc cgggtgcggc atagaccttg
     1801 gacacgaggg gacttttcgc gatcttccag gccagggcgt gctcgcggcc gccgccgccg
     1861 acgatgagga cagagatgcc cattccacct tcctccgctt cccgctccta atgacggaag
     1921 tgccgcactc cggtgaacac catcgccatc ccgtgctcgt cggccgcggc gatcacttcc
     1981 gcatcgcgga ccgaccc
//
LOCUS       DATGYW010000653         5588 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_49810, whole genome shotgun sequence.
ACCESSION   DATGYW010000653 DATGYW010000000
VERSION     DATGYW010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 5588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5588
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49810"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..791)
                     /locus_tag="VK429_09125"
     CDS             complement(81..791)
                     /locus_tag="VK429_09125"
                     /inference="COORDINATES: protein motif:HMM:NF013743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein H"
                     /protein_id="HLN92004.1"
                     /translation="MEGFSLVDIYSTKGIEYLIAAVFFFGFLALQGYILTAAPGRRKS
                     AGVLAGLPAWFRVPEGYGFHQGHTWMKADLMRPNRQRLVKVGLDDFAQKLIGRVDAVE
                     LPAVGSRLTQGDKGWSLRVDSVAIPMLSPVDGEVVAVNREVLRSPEILSRDPYGAGWL
                     LEVKSDRIAADTRNLLTGKMARAWMETSLENLHPIRHEAVGPVLQDGGLPLEGIARVL
                     GGDQWAELAKTHLLTDGG"
     gene            complement(866..1543)
                     /locus_tag="VK429_09130"
     CDS             complement(866..1543)
                     /locus_tag="VK429_09130"
                     /inference="COORDINATES: protein motif:HMM:NF013743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92005.1"
                     /translation="MVVLLVVLTVLGCIGVDLALKRREKAAAEARLVREPSALFPYQT
                     AQELPGGLFVHSGHTWAKLDPYGGAMQVGLDGFAQGILGRVDRFELPPNGTKLRQGEP
                     AFAALQSGKRIEFVSPVDGVVCAVNERLNVDPASARKEPYGKGWAFMLRPSNLSRDLK
                     KLRIGADAAAWLEREARSFTEFLFLHRAVPAEVGATLPDGGIHVEGVMETMDGEILQI
                     AMRKYFR"
     gene            complement(1560..2270)
                     /locus_tag="VK429_09135"
     CDS             complement(1560..2270)
                     /locus_tag="VK429_09135"
                     /inference="COORDINATES: protein motif:HMM:NF013743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein H"
                     /protein_id="HLN92006.1"
                     /translation="MKETRCPFLETKTVVFCKAFPSKMIPVDRMSSSGGLCNTCHYED
                     CPLYGEVRGGGMGMEHVRGFHLKSEYYYHPKHLWVAPYDGEAGEARVGIDDFAARLIG
                     RVDRASVPAVGVAVQENRVCFLLHSGPRTVHLVAPASGVIKAVNPKVAADPSLLNDDP
                     YSEGWIFSMRLKGDAVKGLYHETVARKWYESEVERLQRVFSSDLGMLATDGGEALTDI
                     SSRLNDVQWGKIVSQFLG"
     gene            complement(2671..4038)
                     /locus_tag="VK429_09140"
     CDS             complement(2671..4038)
                     /locus_tag="VK429_09140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011523406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HLN92007.1"
                     /translation="MTMEKKVNIMVVDDEEIVRDSLTSWLEEDGYHVEAVESGKKALE
                     RLPERAWDLMLVDLKMPGMDGIQLMDEVHKASPEMLVIIMTAYATVDTAVKAMKKGAY
                     DYFVKPFNPDDISLTIRKIVDHHKLVQENEFLRKELKKQYKLRDMISKNEKMLEIFDL
                     ARTVAQSSSTVLIQGESGTGKELLARAIHDESPRMDAPFISVSCASLTESLLESELFG
                     HEKGAFTGATVLNRGKLELAKDGTLFLDEIGDISLKLQMDLLRVLEQREFRRVGGSEL
                     IPINSRIIAATNRDLAAAIAEERFRADLYYRLNVISIHIPPLRERREDIPLLVDHFIE
                     KFNIEMGKEIRGITEGAVRILMNNDWPGNARELRNVIERAVVVAKGNIVTEADISLPS
                     AASDADHRTKSLEEIEKAHIRVVLNENQWNIVRSAHALGIDRVTLYNKIKKFGLKKEG
                     VPPNK"
     gene            complement(4035..4586)
                     /locus_tag="VK429_09145"
     CDS             complement(4035..4586)
                     /locus_tag="VK429_09145"
                     /inference="COORDINATES: protein motif:HMM:NF033823.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaemetzincin family Zn-dependent
                     metalloprotease"
                     /protein_id="HLN92008.1"
                     /translation="MGNVIYIRPVGAVDHGILQWLRKEMGDCLMATVQTMPLLPVPPE
                     SYEARRNQYYSTKILKEMLGEVPENALKLLGVTDKDLCIPILTYVFGEAQVGGTAAVV
                     SLARLRQEHYGLEADRPLLLERLRKESLHELGHTFGLVHCPSRECVMYLSNTVVDVDT
                     RGRDFCNGCRTVVASNTGRERRG"
     gene            complement(4601..>5588)
                     /locus_tag="VK429_09150"
     CDS             complement(4601..>5588)
                     /locus_tag="VK429_09150"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN92009.1"
                     /translation="LVSVVSVIAIFIIVALILFYFIERPVKELVLGTKRISGGDLDHF
                     IDVTTNDEMGHLATSFNQMTMDLQNARKQIQEGIRNLEHKVEERTRELKATQSQLLHS
                     EKLAAVGALAATVAHEINNPLTGVYTYIRLMERKIDQGQVGAEEIAKYKGYLDTMRRE
                     VERTTAIVQNLLDFTRPKDPVRKGMDLIKVMEESLALISNKLSLANIEVVKLFNPLPE
                     IQADPAHMKQVFLNLLINASEAMEEGGTLTIRSDHHPDTNTVTMSVRDTGVGIDPKDL
                     ARIFDPFFSTKKKGTGLGLSVVNGIVARHNGKVEIDSTPGKGTDFRVTLPVG"
BASE COUNT          943 a         1904 c         1604 g         1137 t
ORIGIN      
        1 ggggttccct ttgtgccgat ggagaaagtt cggggggcat cctccgcgca aatggcggtg
       61 gcgccccccc ccggtacgcg ttaccctccg tccgtcagca ggtgcgtctt cgccaactcc
      121 gcccattggt cgccgcccag gacccgcgcg atcccttcca gcgggagacc gccgtcctgc
      181 agcaccggcc ccacggcttc gtggcggatc gggtggaggt tttccagcga ggtctccatc
      241 caggcccttg ccatcttccc cgtaagaagg ttccgggtgt ccgccgcgat cctgtcggat
      301 ttcacctcga gcagccagcc ggccccgtac ggatcccgac tcaggatctc gggggaccgg
      361 agaacctccc ggttcaccgc cacgacctcg ccatccaccg gcgacagcat cgggatggcc
      421 acggaatcga ccctgaggct ccaccccttg tccccctgcg tgagacggga accgacggcg
      481 gggagctcga cggcgtccac ccttccgatg agcttctgcg cgaagtcgtc caacccgacc
      541 ttcaccaacc tctggcggtt ggggcgcatc aggtccgcct tcatccaggt atgcccctgg
      601 tggaagccgt acccctcggg gacgcggaac caggccggaa ggccggcaag cacgcccgcg
      661 ctctttcttc gcccgggagc ggcggtcagg atgtacccct gcagggccag gaacccgaag
      721 aagaacaccg cggcgatcag gtactcgatc cccttcgtcg aatagatgtc tacgaggctg
      781 aaaccttcca tcgcactacc tccccgtctt cctcagtttc tttctctaca accgcatgcg
      841 cctcgctgaa cagaggcatc cgacgtcagc ggaaatactt ccgcatcgcg atctgcagga
      901 tctctccgtc catcgtctcc atgaccccct cgacatgaat ccctccgtcc ggcagggtgg
      961 cccccacttc cgcgggcacc gcccggtgca ggaagaggaa ctcggtgaag ctccgggctt
     1021 ccctctccag ccacgccgcg gcgtccgcgc cgatccgcag cttcttcagg tcccgggaga
     1081 ggttggacgg ccggagcatg aacgcccatc ccttcccgta aggctccttc cgcgcagacg
     1141 ccgggtcgac gttgagccgt tcattcaccg cgcagacgac gccgtcgacg ggggaaacga
     1201 actcgatccg cttgcccgac tggagggcgg cgaacgccgg ctccccctgg cgaagcttcg
     1261 tcccgttcgg gggaagctcg aaccggtcga ctctcccgag gatcccctgc gcgaacccgt
     1321 ccagccccac ctgcatggca ccgccgtagg gatcgagctt cgcccaggtg tggccgctgt
     1381 ggacgaacag accgccaggc agttcctgcg ccgtctggta agggaacagc gcggacggct
     1441 cacggacaag ccgggcttcc gccgccgcct tttccctgcg cttgagggcg aggtccaccc
     1501 cgatgcatcc gagaaccgtc agtacgacga gaaggactac catggcgcac ctcctgctct
     1561 taccctagaa attggctgac gatctttccc cattgcacgt cgttcaaccg gctgctgata
     1621 tccgtgagcg cctcgccacc gtccgtcgcc agcatcccaa gatcggaaga gaagacccgc
     1681 tgcagccgtt cgacctcgct ctcgtaccac ttccgcgcga cggtctcgtg gtacaacccc
     1741 ttcaccgcgt cccctttcag ccgcatggag aagatccagc cttcggagta cggatcgtcg
     1801 ttgaggaggg acggatccgc ggccaccttc gggttgacgg ccttgatgac cccgctggcg
     1861 ggtgcaacca ggtggacggt ccgaggaccg gagtggagga ggaagcagac gcggttctct
     1921 tgcaccgcca cgccgacggc gggcaccgat gcgcggtcga cccgtccgat cagacgggct
     1981 gcgaaatcgt cgatccccac acgggcctcc cccgcttccc cgtcgtacgg ggcgacccac
     2041 aggtgcttcg ggtggtagta gtactcggat ttgaggtgga atccgcggac gtgctccatc
     2101 cccatgccgc caccccggac ctcgccatac agggggcaat cctcgtagtg gcaggtgttg
     2161 cagagacccc ccgaggagga catccggtcc accgggatca tcttcgacgg aaacgccttg
     2221 cagaacacca cggtcttcgt ctccaggaaa gggcatctcg tctctttcat cactgcaccc
     2281 ctttacctct gctggttcgg ttcaaccgct cgtctcccgg aaacatctca cgcgtgccct
     2341 gcccgcggtt tcaccaccgc gaccaccgtc agaacgatgt atgcgattcc gatcaccagg
     2401 taccccatcg ttcccacctc cctccgcagg gttgctcccc gcacctctat ctagagcaat
     2461 ggttgtgcca gagccggttt ccggcgcgta agccccacat aacaacctgt taatgaagga
     2521 gataatggat cggagccccc accaatggtg gaaggtccgg aaagtcccgg attgcagaga
     2581 ttctctacac tttcaggagg ggaaagatta catgttgaat ttcctacgga ttatggtgta
     2641 ttgaaattca acactctatc gattttttca tcacttgttc ggcggaaccc cttccttctt
     2701 caggccgaat ttcttgatct tgttgtagag ggtgacccgg tcgatcccca gcgcatgggc
     2761 ggaccgcacg atgttccact ggttctcgtt caggacgacc cggatgtgcg ccttctcgat
     2821 ctcctcgagc gatttcgtcc ggtgatccgc atcggaagcg gcggacggaa gactgatgtc
     2881 ggcctcggtg acgatgttcc ccttcgccac gacgaccgcc ctctcgatca cgttccggag
     2941 ctcccgcgcg tttcccggcc aatcgttgtt catcaggatt ctcacggccc cttcggtgat
     3001 cccgcggatc tccttcccca tctcgatgtt gaatttctcg atgaagtggt cgaccaggag
     3061 cgggatgtcc tccctcctct cccgcaacgg cgggatgtgg atggagatga cgttcagccg
     3121 gtagtagagg tcggcgcgga agcgctcctc cgcgatggcg gcggcaaggt cccggttcgt
     3181 cgcggcgatg atccgcgagt tgatggggat cagttccgag cccccgaccc tgcggaactc
     3241 cctttgctcg aggacgcgga gaaggtccat ctgcagcttc aggctgatgt ccccgatctc
     3301 gtccaggaag agggtcccgt ccttggcgag ctccagtttc ccccggttga ggacggtggc
     3361 gcccgtgaag gcgccctttt cgtgcccgaa gagctcgctc tccagcaggc tttccgtgag
     3421 cgaggcgcag gacaccgaga tgaacggcgc gtccatcctc gggctctcgt cgtggatcgc
     3481 ccgcgcgaga agctccttcc ccgtcccgct ctcgccctgg atgagaaccg tcgagctgct
     3541 ttgcgcgacg gtccgcgcca gatcgaagat ctccagcatc ttctcgttct tgctgatcat
     3601 gtcccgcagc ttgtactgct tcttcagctc cttccgcaga aactcgttct cctggacgag
     3661 cttgtgatgg tccacgatct tccggatcgt cagggagatg tcgtccgggt tgaacggctt
     3721 gacgaaatag tcgtaggccc ccttcttcat cgccttcacg gcggtgtcga ccgtcgcgta
     3781 ggccgtcatg atgatgacca gcatctcggg agaggctttg tgcacctcgt ccatcagctg
     3841 tatcccgtcc atgccgggca tcttcaggtc caccagcatc aggtcccacg ccctctcggg
     3901 gaggcgttcc agcgccttct tgccgctctc cacggcctcc acgtggtacc cgtcctcctc
     3961 gagccagctg gtcagcgaat cccggacgat ttcctcgtcg tccaccacca tgatgttgac
     4021 cttcttttcc atcgtcatcc ccgcctctcc ctcccggtgt tggatgccac gaccgtccgg
     4081 caaccgttgc agaagtcccg ccccctcgtg tccacgtcca ccacggtgtt cgaaaggtac
     4141 atcacgcact ccctcgacgg gcaatgaacg aggccgaacg tgtgccccag ctcgtggagg
     4201 ctttccttgc gaagcctctc caggagcagg ggccggtccg cctccagccc gtaatgctcc
     4261 tgccgcagcc gggcgaggga gacgacggcg gccgtccccc ccacctgcgc ctccccgaac
     4321 acgtacgtca ggatcgggat gcacagatcc ttgtccgtca ccccaaggag cttgagcgcg
     4381 ttctccggga cctccccgag catctccttg aggatcttcg tcgaatagta ctggttccga
     4441 cgggcctcgt agctttcggg gggaacgggg agcaatggca tcgtctggac ggtcgccatg
     4501 aggcagtcac ccatctcttt cctcagccat tggaggattc cgtgatccac cgcccccaca
     4561 ggccggatgt agatgacgtt gccgatgttc tccgcttccc ttacccgacg ggcagagtca
     4621 cccggaaatc ggttcccttc ccgggggtgc tgtcgatttc caccttgccg ttatggcggg
     4681 cgacgatgcc gttgacgacc gagagtccca gcccggtccc ctttttctta gtagagaaaa
     4741 aaggatcgaa gatccgggcg aggtccttcg gatcgatccc gacccccgtg tcgcgaacgc
     4801 tcatcgtcac ggtgttcgta tccgggtggt gatcggaccg gatcgtcagt gtaccccctt
     4861 cctccatggc ttcggaggcg ttgatgagga ggttgaggaa cacctgcttc atgtgcgccg
     4921 ggtcggcctg gatctccggc agggggttga agagcttcac cacctcgata ttggcgaggc
     4981 tcagcttgtt cgagatgagg gcgagggact cctccatcac cttgatgagg tccatgccct
     5041 tgcggaccgg gtccttcggc cgtgtgaaat cgagcagatt ctgcacgatg gcggtcgtcc
     5101 tctcgacctc ccttcgcatc gtgtcgagat accccttgta tttcgcgatc tcctccgccc
     5161 cgacctgtcc ctggtcgatc tttctctcca tgagccggat gtacgtgtag acgccggtca
     5221 gcggattatt gatctcgtgc gccacggtcg ccgccaacgc ccccacggcc gcgagcttct
     5281 ccgaatggag gagctgcgac tgggtcgcct tgagttcccg cgtccgctct tccaccttgt
     5341 gctccaggtt ccggatcccc tcctggatct gcttccgggc gttctgcagg tccatggtca
     5401 tctggttgaa cgacgtcgcc aggtgtccca tctcgtcgtt cgtcgtaacg tcgatgaaat
     5461 ggtcgagatc cccccccgag atccgcttcg tgccgaggac gagctccttg accggcctct
     5521 cgatgaagta aaagaggatg agggcgacga tgatgaagat ggcgatcacc gagacgacgc
     5581 ttacaagc
//
LOCUS       DATGYW010000654         2109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_262345, whole genome shotgun sequence.
ACCESSION   DATGYW010000654 DATGYW010000000
VERSION     DATGYW010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262345"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2109
                     /locus_tag="VK429_09155"
     CDS             <1..>2109
                     /locus_tag="VK429_09155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015281350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic beta 1-2 glucan synthetase"
                     /protein_id="HLN92010.1"
                     /translation="VNWFATLLVKPDPLPRMDFSEGIPSESRTLVVVPAMLTSPLNIE
                     SLVESLEVRFLANRDDNLHFGLLTDFPDANEETIPEDGELLRLARKGIEELNDKYANA
                     KSGPFFLFHRPRRWNPQERTWMGYERKRGKLAELNLLLRGGAPDRFSVVVGKIADLSN
                     VKFVIPLDTDTQLPRDSARQFVGAMAHPLNRPRYDERVERVSEGHGILQPSVADSLSG
                     TNRSRYARLFGSEPGIDPYTRAVSDVYQDVFDEGSFIGKGIYDVDAFEQALKGRLPEN
                     RILSHDLLEGCYARAGLLSDAHLFDEYPSSYLADVNRRHRWIRGDWQIAAWLLSRVPG
                     PGDARRRNPLSGLSQWKIFDNLRRSLEPPALTLLLLLGWNSFSSAWYWTLSVIGILLI
                     PSLVASALEMVRKPADALLRQHLAAEARSAGRRFAQAGFTLACLPYEAFFGVDAVART
                     AVRMLFTHKRLLEWQPSGNPDRNRGEDLATFFRSMWIAPVIAAAATIHLGISRPVALA
                     PAGPILALWFASPAIAWWISLPLARRRAALSSDQILFLRKLSRRTWEFFETFVGPEDH
                     WLPPDNYQEYRVASVAHRTSPTNMGLSLLANLAAYDFGYLPAGQLVERTENTLSTMET
                     LARHRGHFYNWYDTQSLEPLLPLYISTVDSGNLSGHLLTLRQGLLELPEHAILGERWL
                     EGISDTFQVLVDAVDGPPPPP"
BASE COUNT          357 a          688 c          659 g          405 t
ORIGIN      
        1 gtgaactggt ttgccacgtt gcttgtcaaa ccggatcctc tgccgcgaat ggacttctcc
       61 gaaggaattc cgtcggaatc gcgcaccctg gtggtggtcc cggcgatgct cacgagcccc
      121 ctcaacatcg agtccctggt cgagtccctg gaagtccggt tcctggcaaa tcgggatgac
      181 aacctgcact tcggtctgct gacggacttc ccggatgcga acgaggaaac gatcccggag
      241 gacggggagc tgttgcggtt ggcccggaag gggatcgaag agctgaacga caagtacgcg
      301 aacgcaaaga gcggaccgtt cttccttttt caccgcccgc gccgatggaa tccgcaggag
      361 cggacctgga tgggctacga acgcaagcgg gggaagcttg cggaattgaa tctgcttctc
      421 cgcggcgggg cgccggaccg tttttccgtc gtcgtcggga agatcgcgga tctgtcgaac
      481 gtcaaattcg tgatcccgct cgatacggat acgcaactgc cgcgcgattc ggcgcggcag
      541 ttcgtcggag ccatggcgca cccgctgaac cggccgcggt acgacgagcg ggtggagcgg
      601 gtctccgagg ggcacgggat cttgcagccg agcgtggccg acagcctttc cggcacgaac
      661 cggtcgcggt atgcgcgatt gttcgggagc gaaccgggaa tcgacccgta cacgcgcgcc
      721 gtctccgatg tgtaccagga cgtgttcgac gaaggctcct tcatcggcaa ggggatctac
      781 gacgtcgatg cgttcgagca ggccctcaag ggacgtcttc ccgagaaccg gatcctcagc
      841 cacgatctcc tggaagggtg ctatgcgcgg gcgggactgt tgagcgatgc acatcttttc
      901 gatgaatatc cgtccagcta ccttgccgac gtgaaccgcc gccaccggtg gatccgtggg
      961 gattggcaga ttgccgcgtg gctgctgtcg cgcgtccccg ggcccggcga cgcccgccgc
     1021 aggaacccgc tctcggggct gtcccaatgg aagatcttcg acaatcttcg gcgcagcctc
     1081 gaacctcccg cattgacgct cctgttgctg ctgggttgga actctttctc ttccgcctgg
     1141 tattggacct tgtcggtgat cgggatcctc ctgattccct cgttggtggc ctccgccctg
     1201 gaaatggtcc ggaagcccgc cgatgcgctg ctgcgtcagc accttgccgc cgaagcgcgc
     1261 tccgcgggac ggcgattcgc ccaggcgggg tttacactcg cgtgcctgcc gtacgaagcg
     1321 tttttcggcg tggatgcggt cgcgcgaacg gccgtgcgga tgctgttcac gcacaagcgg
     1381 cttctcgaat ggcaaccgtc ggggaacccc gaccgcaatc gcggcgagga cctggcgaca
     1441 ttcttccgat cgatgtggat cgcccccgtg atcgccgccg ccgcgacgat ccacctcggg
     1501 atttcgaggc ctgtcgcgct ggcgccggcc ggacccatcc tggccctgtg gttcgcctcc
     1561 cccgccatcg cctggtggat cagcctcccg ctcgcccgcc gcagagcggc tctatcgtcg
     1621 gaccagatcc tctttctccg gaagctttcg cgcaggacct gggagttctt cgaaaccttc
     1681 gtcggcccgg aagatcattg gctgccaccg gacaactacc aggaataccg cgtcgcatcg
     1741 gtcgcacatc gcacctcgcc gaccaatatg gggctttcgc tcctcgcgaa tctggccgcc
     1801 tacgacttcg gataccttcc ggcggggcaa ctcgtcgagc gcacggagaa tacgctgagc
     1861 acgatggaga ccctggcgcg acatcgaggt catttctaca actggtacga cacgcaatcc
     1921 ctggaaccgc tcctacctct ctacatctcg accgttgaca gcggaaatct ctcgggccac
     1981 ctgctgacgt tgcggcaggg cctgctcgaa cttccggaac acgccatcct cggggagcga
     2041 tggctggagg gcatcagcga cacctttcag gttctcgtgg acgcagtgga tggacctccg
     2101 cccccgccg
//
LOCUS       DATGYW010000655         2488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_153884, whole genome shotgun sequence.
ACCESSION   DATGYW010000655 DATGYW010000000
VERSION     DATGYW010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2488)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2488
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153884"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..496
                     /gene="rpsL"
                     /locus_tag="VK429_09160"
     CDS             125..496
                     /gene="rpsL"
                     /locus_tag="VK429_09160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010938593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HLN92011.1"
                     /translation="MPTINQLVRKGRTVVANKSNSPALDSCPQKRGVCLRVYTTTPKK
                     PNSALRKVARVRLTNGLEVTVYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHIIRGKL
                     DSVGVQDRRKSRSKYGTKRPK"
     gene            659..1129
                     /gene="rpsG"
                     /locus_tag="VK429_09165"
     CDS             659..1129
                     /gene="rpsG"
                     /locus_tag="VK429_09165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015851064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HLN92012.1"
                     /translation="MPRRGFVSKRVVSPDPVYGDVLVAKMIHAIMLDGKARVAENVVY
                     GSLDVLKEKTKEDPVAVLKKAIENVKPVVEVKSRRVGGATYQVPIEIRPERRQSLSIR
                     WLVGYARERAEKTMIQRLSGELLDAYNNRGNTFKKKEDTHKMAEANKAFAHYRW"
     gene            1163..>2488
                     /gene="fusA"
                     /locus_tag="VK429_09170"
     CDS             1163..>2488
                     /gene="fusA"
                     /locus_tag="VK429_09170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011365698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HLN92013.1"
                     /translation="MSRVSPLDKTRNIGIMAHIDAGKTTTTERVLYYTGVSHKMGEVH
                     DGTATMDWMEQEQERGITITSAATTCFWRGHRINIIDTPGHVDFTIEVERSLRVLDGA
                     VAVFCAVGGVEPQSETVWRQADKFRVPRLAMVNKMDRTGADFERVVRMMKERLAANPV
                     PIQLPLGKEDSFRGVIDLVRMKAIVWEEDTLGAKFHDEPIPEGMKAEVAAARERLLEA
                     VADVDDTLVERYLLGQDIPVDELMSAIRQATIGNRITPIVCGTAFRNKGVQPMLDAVV
                     DYLPSPVDIPPVVGIDPHGKAEVTRKPSDDEPFSALAFKIMNDPFVGHLTFVRVYSGV
                     LSSGDFIYNSVRQKKERVGRLLKMHANKREEIKTIYAGEIAAVVGLKTAYTGDTLCDQ
                     DHEIILESITSPAPVISIAIEPKTKADQEKLGFSLQKLMMEDPSFQVRND"
BASE COUNT          528 a          762 c          786 g          412 t
ORIGIN      
        1 ctgcaccgga tggacgaccc aggggccgcg gataccaaga aaatcgttga cagtacggga
       61 aactattgtt ataaacaaca gttcattctg ttggatagag cttcatacac cggaaggaaa
      121 gtgaatgccc acgatcaacc agcttgtccg gaaggggcgg acggtcgtcg ccaacaagag
      181 caactccccg gcgctcgatt cgtgccccca aaagcggggg gtttgcctcc gcgtgtatac
      241 caccaccccc aagaagccga actccgcgct tcggaaggtg gcgagggtcc ggctcaccaa
      301 cggcctcgaa gtgacggtat acatcccggg cgaggggcat aacctgcagg aacactccgt
      361 ggtcatgatt cggggaggac gggtaaagga cctcccgggc gttcgttatc acatcatccg
      421 tgggaagctg gattccgttg gtgtccagga cagacggaag tcgcggtcga agtacggtac
      481 caagcgaccc aaatagcttc cccattttca gcgtagaggt tccttccaat ccccggcggg
      541 tctgccggga agggtaaaac gggtttggca caactcccgc ttcagtccat ttgaggcggg
      601 aatctttgtt gtcgtgtgtt tcccattccg aggcaactgg ccgagggggt tcgatcgtat
      661 gcccaggaga ggtttcgttt ccaagcgggt cgtttcgccc gatcccgtgt acggcgacgt
      721 gctggtcgcg aagatgatcc acgccatcat gctcgacgga aaggcgcggg ttgccgagaa
      781 cgtcgtgtac ggatcgctgg acgtcctcaa ggaaaagacg aaggaagacc ccgtcgcggt
      841 cctgaagaag gcgatcgaga acgtgaagcc ggtggtcgag gtcaagtccc gcagggtcgg
      901 cggtgcgacc taccaggtcc cgatcgagat ccgtccggag cgacggcagt ccctctcgat
      961 ccgctggctg gtcgggtacg cgcgggagcg ggccgagaag accatgatcc agcgcctctc
     1021 cggcgagctc ctcgacgcct acaacaaccg cggcaacacg ttcaagaaga aggaagacac
     1081 ccacaagatg gccgaggcga acaaggcgtt cgcccactac cgctggtaag agcgcggcgg
     1141 caggaaaggg aaggggcggt tcgtgtccag agtttcaccg ctcgacaaaa cccggaacat
     1201 cgggatcatg gcccacatcg acgccgggaa gacgacgacc accgagcgcg tgctctacta
     1261 caccggcgtc tcccataaga tgggagaggt ccacgacggc accgcaacga tggactggat
     1321 ggagcaggag caggagaggg gcatcaccat cacctccgcc gcgacgacgt gcttctggcg
     1381 ggggcaccgg atcaacatca tcgacacccc ggggcacgtc gacttcacaa tcgaggtgga
     1441 gcgttccctt cgggttctcg acggcgcggt ggcggtcttc tgcgcggtcg gcggagtgga
     1501 gccccagtcc gaaacggttt ggcgccaggc ggacaagttc agggtccccc gcctcgccat
     1561 ggtcaataaa atggatcgca ccggcgccga tttcgagcgc gtggtgcgga tgatgaagga
     1621 acgcctcgcc gccaatcccg tcccgatcca gcttcccctt gggaaggaag attccttccg
     1681 cggggtcatc gacctggtcc ggatgaaggc gatcgtctgg gaggaggaca ctctcggggc
     1741 gaagttccac gacgagccga ttcccgaagg catgaaggcc gaagtcgcgg ccgcgcggga
     1801 gcgccttctc gaggcggtgg ccgacgtcga cgacacgctc gtggaacggt acctgctcgg
     1861 ccaggacatc ccggtcgacg agctcatgag cgcgatccgc caggcgacga tcgggaaccg
     1921 gatcacgccg atcgtctgcg gcacggcgtt ccgcaacaag ggcgtccagc cgatgctcga
     1981 cgcggtggtc gattacctcc cgtctccggt ggacatcccg ccggtcgtcg gaatcgaccc
     2041 gcacggcaag gccgaagtca cccggaaacc gtccgacgac gaacccttct cggccctcgc
     2101 cttcaagatc atgaacgacc ccttcgtggg gcacctcacc ttcgttcgtg tctattccgg
     2161 cgtgctcagc tcgggagact tcatttataa ttccgtccgg cagaagaagg aacgggtcgg
     2221 ccggctcctg aaaatgcacg ccaacaagcg ggaagagatc aagaccatct acgccggcga
     2281 gatcgccgcg gtggtggggc tgaagaccgc ctacacgggc gataccctct gcgatcagga
     2341 ccacgagatc atcctcgagt cgatcacgtc tcccgcgccg gtcatctcga tcgccatcga
     2401 gccgaagacc aaggcggacc aggagaagct cggcttctcc ctgcagaaac tgatgatgga
     2461 ggacccctcc ttccaggtcc ggaacgac
//
LOCUS       DATGYW010000656         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_205315, whole genome shotgun sequence.
ACCESSION   DATGYW010000656 DATGYW010000000
VERSION     DATGYW010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205315"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..954)
                     /locus_tag="VK429_09175"
     CDS             complement(<1..954)
                     /locus_tag="VK429_09175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012097560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HLN92014.1"
                     /translation="MEYRSQKIAYWYFAAALPLFVLQVVVGLWLAANYTFTIPQSIVN
                     VFPFSTARAFHTNLLVLWMLLGFMGGTYYIIPEETKSELYSTGLAWFQLIALLVTGVT
                     ALVGFLFGWTQGRPLLEIPMALDFVVVIGALVFLFNVAMTMLKARNWTAIQGTLLGGL
                     VFLALLYLFGIPFYRNLVIDWYYWWWVIHLWVEGAWELVTASIFAFILMKITGVDRQV
                     VEKWLYVEIGLFLFTGLAGTGHHYYWIGAPRYWLWIGGIFSALEPLPILLMTIDTMMH
                     VRERQAKILNPLTWTYAIGCAVMHLIGAGVWGFLHTLPQINY"
     gene            complement(965..1669)
                     /locus_tag="VK429_09180"
     CDS             complement(965..1669)
                     /locus_tag="VK429_09180"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HLN92015.1"
                     /translation="MTKKTAFWIFLIGTISSAVVFLAATYDTHRQVGALANVDKLSDQ
                     VVAGKRAFEKYNCNDCHTILGFGGYYAPDLTKVVQRVGEEGIRYRLKSPELAFANSPR
                     KMPNQHLPDQEITDLVAFFRWVGEINNNDWPPQDSKKRLSRGEQMMVAKVGVSPGAAV
                     FQTKGCMNCHSLNGTGGTFGPALDKVGAGMSAEEIEKYVRNPKGVDPNSKMPSQKDNL
                     SERELDEVARFLATLK"
BASE COUNT          319 a          548 c          544 g          300 t
ORIGIN      
        1 gtagttgatc tgcggaaggg tgtgcaggaa tccccacacg ccggcgccga tcaggtgcat
       61 caccgcgcag ccgatcgcgt acgtccacgt gagggggttg aggatcttcg cctgccgttc
      121 gcggacgtgc atcatcgtat cgatcgtcat caggaggatc ggcagcggct cgagggccga
      181 gaagatcccg ccgatccaga gccagtatct cggcgcgccg atccagtagt agtggtgccc
      241 ggtcccggcc agcccggtga agaggaacag gccgatctcg acgtagagcc acttctccac
      301 cacctggcga tccacgccgg tgatcttcat caggatgaag gcgaagatcg acgcggtgac
      361 cagctcccac gccccctcca cccagagatg gatgacccac caccagtagt accagtcgat
      421 gacgaggttc cggtagaacg ggatgccgaa gagatacagc agggcgagga agaccagccc
      481 cccgagcagc gttccctgga tggcggtcca gttcctcgcc ttgagcatcg tcattgcgac
      541 gttgaacagg aagacgagcg cgccgatgac gacgacgaag tcgagcgcca tcgggatctc
      601 caggagcggc cgcccctgcg tccacccgaa gaggaatccc acgagggccg tcacgcccgt
      661 gacgagcagg gcgatcagct ggaaccaggc gaggccggtg gagtagagct ccgacttcgt
      721 ctcctcgggg atgatgtagt aggtgccgcc catgaagccc aggagcatcc acaggacgag
      781 gagattcgtg tggaacgccc gcgccgtcga gaacggaaag acgttcacga tcgactgcgg
      841 gatggtgaag gtgtagttgg cggccagcca gagccccacg acgacctgga gcacgaacag
      901 cgggagcgcg gcggcgaagt accagtaggc gatcttctgg gagcggtatt ccatcggggc
      961 ctccttattt cagggtcgcg aggaacctgg ccacttcgtc cagttcccgc tcggagaggt
     1021 tgtctttctg cgacggcatt ttggagttcg ggtcgacgcc cttcgggttc cggacgtatt
     1081 tttcgatctc ctccgccgac atccccgccc cgaccttgtc caacgcgggc ccgaaggttc
     1141 cccccgtccc gttgagggag tggcagttca tgcacccctt cgtctggaag acggcggccc
     1201 cgggcgacac ccccaccttt gcgaccatca tctgctcgcc ccgggacagg cgctttttac
     1261 tgtcctgcgg cggccagtcg ttgttgttga tctccccgac ccaccggaag aaagcgacga
     1321 ggtcggtgat ctcctggtcc gggagatgct ggttcggcat cttccgcggg gagttggcga
     1381 acgcgagctc gggcgacttc aaccggtacc ggatcccctc ctcgccgacc cgctggacca
     1441 ccttcgtcag gtccggcgcg tagtagccgc cgaagcccag gatcgtgtgg cagtcgttgc
     1501 agttgtactt ctcgaacgcc cgtttcccgg ccactacctg gtcggacagc ttgtccacgt
     1561 tcgccagcgc ccccacctgc cggtgggtat cgtaggtggc agcgaggaac acgacagccg
     1621 aggagatcgt gccgatcagg aaaatccaga aggcggtctt cttggtcatc cttcccctcc
     1681 cagaggttcc cggcgaacaa gccgccggtc g
//
LOCUS       DATGYW010000657         2856 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_96969, whole genome shotgun sequence.
ACCESSION   DATGYW010000657 DATGYW010000000
VERSION     DATGYW010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2856
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96969"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(248..324)
                     /locus_tag="VK429_09185"
     tRNA            complement(248..324)
                     /locus_tag="VK429_09185"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(288..290),aa:Ile,seq:cat)
     gene            complement(557..2347)
                     /gene="rpoD"
                     /locus_tag="VK429_09190"
     CDS             complement(557..2347)
                     /gene="rpoD"
                     /locus_tag="VK429_09190"
                     /inference="COORDINATES: protein motif:HMM:NF004208.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HLN92016.1"
                     /translation="MARRKQPDGIDGLVEKGRAQGYVTYDELNSALPPDVLTGDQIED
                     VMAIFGANAIEVVDDFQKVPLHPGANLLIGEEEAGEEEEATVEEEPAVEEEEFGYPGG
                     VKGNDPVRLYLKEMGAIHLLNREGEVSLAKRIEDGEREIVSAVKGCSIALADLFKLGE
                     KLKAGEMQVRDVIKDLDDDSTEDEEKAALDKVLRIVQRIRKTYQSALEVEQRLRKGGL
                     KEKDRQALKNRYVSLNERVVESIQEIHLKERQIEVIGDKIRRFADRVEAAESRIRDGC
                     ARLRLTEKECYRLFKEIHSKKDGLAKAASKYHVKKEKLLEIEEALKESRAIVRKVERE
                     AGLSAAQIQETLAAIEQGERKVREAKRELVEANLRLVVSIAKKYTNRGLQFLDLIQEG
                     NIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRT
                     SRYLVQELGREPNPEEIAERMDIPLEKVRKVLKIAKEPISLETPIGEEEDSHLGDFIE
                     DKNTASPVDSVINIDLAEQVDKVLGSLTPREERVLRMRFGIGEKSDHTLEEVGKDFEV
                     TRERIRQIEAKALRKLRHPSRSKRLRTFME"
     gene            complement(2363..>2856)
                     /locus_tag="VK429_09195"
     CDS             complement(2363..>2856)
                     /locus_tag="VK429_09195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92017.1"
                     /translation="VGPSALPTVTEGGAPPRSKDSRSEESHLLRLLAVDPSLAVTALD
                     DGVGELLSGEDAREALAHLAGLAERTPGETGFPLGEDLPDGARKLLSAELVLADVSPE
                     EARRRYPGAVLSLRIRRAREKTGELQEKMKGASGDEASKLFDRVVTAKRELERLEMER
                     RSR"
BASE COUNT          420 a          999 c          858 g          579 t
ORIGIN      
        1 gaggaccgac cgcacggggg cttcggggtc gcccaggaga atcccgacgt tgtcccagtc
       61 ggcgcagtgg gcgaacggga accgctcatc gagcgcccgc aacacgtcgt tcaccgtgac
      121 tccggcgcgg cgggtcacgc aggcaccttg ccgggggcca taaatgaaaa tgcaccgata
      181 gccggtgcat ttcgtgccgt gtccattgcg ggcccgctca cgccagaccc catggcaacg
      241 tcgatattgg tgggcccacc tggcctcgaa ccagggacca accggttatg agccggtggc
      301 tctgaccaac tgagctatgg gcccgacacg aagaacatgc gttcatcctt tgattatctt
      361 ccgcccgctt tcggggtgtc aacgccgtcc gccccgtagg gtctgtccat gaataggatg
      421 tgcagatatt ggcgtcgagt cgcccggccg gcaaggcgcg atgagggaga ataccgggag
      481 tattcgaccg acgagcaacg cagcccgccg ggatgaatcg gcgccaagat cgcacaggtt
      541 attcatggac aggccctcac tccatgaagg tccgcagccg tttgctccgg ctggggtggc
      601 gcagcttgcg gagcgccttc gcctcgatct ggcggatccg ctcccgggtc acctcgaaat
      661 ccttgcccac ctcctcgagg gtgtgatcgg atttctcgcc gatcccgaac cgcatccgga
      721 gaacccgctc ctcgcgcggc gtgaggctgc caagcacctt gtccacctgt tccgcgaggt
      781 cgatgttgat cactgaatcc accggagaag ccgtgttctt gtcctcgatg aagtcgccga
      841 ggtggctgtc ctcctcctct ccgatcggcg tttcgaggga gatcggctcc ttggcgattt
      901 tcagcacctt ccggaccttc tcgaggggga tgtccatccg ctctgcgatc tcctccgggt
      961 tcggttcccg tcccagctcc tgcacgaggt accgggaggt ccggatgagc ttgttgatcg
     1021 tctcgatcat gtggaccggt atgcggatgg ttcgggcctg gtcggcgatc gcccgcgtga
     1081 tcgcctggcg gatccaccag gtggcgtagg tggagaactt gtacccgcgg cggtactcga
     1141 acttgtccac cgccttcatc aggccgatgt tcccctcctg gatgagatcc aggaactgga
     1201 ggccacggtt ggtgtatttc ttagcgatcg agaccacaag ccggaggttc gcctcgacca
     1261 gctcccgctt ggcttcacgg actttccgct cgccctgctc gatcgctgcg agcgtctcct
     1321 ggatctgcgc ggcggagagc cccgcctccc gctccacctt ccggacgatg gcccgcgact
     1381 ccttgagggc ctcctcgatt tcgaggagct tctccttctt cacgtggtac ttcgaggcgg
     1441 ccttcgcgag gccgtccttc ttcgaatgga tctccttgaa gaggcggtag cactccttct
     1501 ccgtgagtct cagccgcgcg cagccgtcgc ggatgcggct ctccgccgcc tcgacccggt
     1561 cggcaaaccg gcggatcttg tcgccgatga cctcgatctg gcgctccttg aggtggatct
     1621 cctggatcga ctccacaacg cgctcgttga gggagacgta cctgttcttc agcgcctgcc
     1681 ggtctttttc cttcaggccg cccttccgga ggcgctgctc gacctcgagg gcggactggt
     1741 aggtcttccg gatccgctgg acgatgcgca gcaccttgtc gagcgccgcc ttctcctcat
     1801 cttccgtgga gtcgtcgtcc agatccttga tgacgtcccg gacctgcatc tcccccgcct
     1861 tgagcttctc gcccaacttg aacaggtcgg ccagcgcgat ggaacagccc ttcaccgcgg
     1921 agacgatctc ccgctcgccg tcctcgatcc gcttcgcgag gctgacctcg ccctcgcggt
     1981 tgagaaggtg gatggcgccc atctccttga ggtagaggcg cacgggatcg ttccccttca
     2041 ccccccccgg gtacccgaac tcctcctcct cgacggcggg ctcctcctcg acggtcgcct
     2101 cttcctcctc cccggcctcc tcttcgccga tcaggaggtt ggcgccggga tggaggggga
     2161 ctttctggaa atcgtccacc acctcgatcg cgttcgcgcc gaagatcgcc atgacgtcct
     2221 cgatctggtc ccccgtgagc acgtcgggag gaagggcgct gttcaattcg tcgtaggtga
     2281 cgtacccctg cgcccgtcct ttttccacca gtccgtcgat gccgtccggc tgtttccgcc
     2341 tcgccatctg cgcttcacct cgttatcggg atctgcgttc catttccagc cgctccagct
     2401 cccgctttgc ggtcaccacc cggtcgaaga gcttcgaagc ctcatcgccc gacgcaccct
     2461 tcatcttctc ctgcaactcc ccggtcttct cccgcgcccg gcggatccgg agggaaagga
     2521 ccgcccccgg gtagcgcctg cgcgcctcct ccggggaaac atccgccagc acaagctcgg
     2581 cggacaggag ttttcgcgcg ccgtcgggaa gatcttcccc cagcgggaat cccgtctccc
     2641 cgggggtccg ctcggccaga cccgccaggt gcgcgagggc ttcccgggcg tcttctccgg
     2701 agagaagctc cccgaccccg tcgtcgagcg ccgttacggc gagggacggg tccacggcca
     2761 gcagccgcag gaggtggctc tcctcgctgc gggaatcctt gctccgcggc ggggcgcccc
     2821 cttccgtaac ggtcggaagg gcggacggcc cgacct
//
LOCUS       DATGYW010000658         2292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_205450, whole genome shotgun sequence.
ACCESSION   DATGYW010000658 DATGYW010000000
VERSION     DATGYW010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2292
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205450"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..510)
                     /gene="carB"
                     /locus_tag="VK429_09200"
     CDS             complement(<1..510)
                     /gene="carB"
                     /locus_tag="VK429_09200"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513329.1"
                     /note="four CarB-CarA dimers form the carbamoyl phosphate
                     synthetase holoenzyme that catalyzes the production of
                     carbamoyl phosphate; CarB is responsible for the
                     amidotransferase activity; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl phosphate synthase large subunit"
                     /protein_id="HLN92018.1"
                     /translation="MPKRSDLKKIMLIGSGPIIIGQACEFDYSGTQACKALREEWYEV
                     VLVNSNPATIMTDTDFADRTYIEPITPEIVGKIIERERPDALLPTIGGQTGLNIAISL
                     HEMGILQKFGVELIGASFEAIQKAEDRNLFRIAMEKLGLTVPRSGYIRSLEEALRVIP
                     DIGYPAIIRP"
     gene            complement(510..1388)
                     /locus_tag="VK429_09205"
     CDS             complement(510..1388)
                     /locus_tag="VK429_09205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015720043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HLN92019.1"
                     /translation="MRANDVLTAPTSALSACRLCPRECGVNRLEGERGFCGAGRLARV
                     AAVSVHPGEEPPISGTRGSGTVFFSHCNMKCLFCQNYPISQYGNGREMETETLAGEML
                     RLRERGVHNVNFVTPTPHAPQMLEAILLARGKGFDLPVVYNTNGYDALETLALLEGIV
                     DIYLPDAKYLSGELADTASGTPDYARHNEAAIGEMVRQVGFLSSGHDGIAVRGVLVRH
                     LVLPGRVGETEAVLAHLFEMHGPGLPLSLMGQYFPAWQAATSAGFNRKVTRKEYDRAI
                     GAAERLGFRNVFIQER"
     gene            complement(1385..2248)
                     /gene="carA"
                     /locus_tag="VK429_09210"
                     /pseudo
     CDS             complement(1385..2248)
                     /gene="carA"
                     /locus_tag="VK429_09210"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
BASE COUNT          393 a          734 c          748 g          417 t
ORIGIN      
        1 ggggcggatg atcgccgggt atccgatgtc cgggatgacc cgcaaggcct cttcgaggga
       61 gcggatgtac ccggatcggg ggaccgtcag ccccagtttc tccatcgcga tccgaaagag
      121 gttccggtcc tccgccttct ggatcgcttc aaagctcgca ccgatcagtt ccacgccgaa
      181 cttttgcaag atccccatct cgtgcaggga aatggcgatg ttcagccccg tctgtccccc
      241 gatggtcggc agcagcgcgt cggggcgttc ccgttcgatg atcttcccga cgatttccgg
      301 ggtgatcggc tcgatgtacg tgcggtcggc gaagtcggtg tcggtcatga tcgtcgccgg
      361 gttgctgttg acaaggacga cttcgtacca ctcctcacgg agggccttgc acgcctgggt
      421 tcccgagtag tcgaattcac acgcctgccc gatgatgatc ggaccggagc cgatgagcat
      481 gatctttttc aggtcgctgc gctttggcac tatcgctcct gtatgaaaac gttccggaat
      541 ccaaggcgct ccgcggcccc gatcgcccgg tcgtactcct ttcgggtcac tttccggttg
      601 aacccggcgg aggtcgccgc ctgccacgcc gggaaatatt gccccatcag cgaaagggga
      661 agccccgggc cgtgcatttc aaataggtgt gccagcacgg cctccgtctc ccccactctt
      721 cccggaagaa cgagatggcg gacgaggacc ccccgaacgg cgattccatc gtgccctgag
      781 gacaggaacc cgacctggcg caccatctct ccgatggcgg cttcgttatg ccgcgcgtag
      841 tcgggggttc cggaagccgt atccgcaagc tcgccggaaa gatacttcgc gtcgggcagg
      901 tagatgtcga cgatgccttc aaggagcgcg agcgtttcga gggcgtcata tccgttcgtg
      961 ttgtagacca ccgggagatc gaaccctttc ccgcgggcca ggagaatcgc ttccagcatc
     1021 tgcggagcgt gcggggtggg ggtgacgaag ttgacgttgt ggaccccccg ttcccggagc
     1081 cggagcatct ccccagccag cgtttccgtc tccatctccc gtccgttccc gtactggctg
     1141 atcgggtagt tctggcagaa gaggcacttc atgttgcagt ggctgaaaaa gaccgtcccc
     1201 gagccgcgcg tcccggaaat cgggggttcc tcgccgggat gaacggaaac ggcggcgacg
     1261 cgcgcgagcc tgcccgctcc gcagaacccc cgctcccctt cgaggcggtt cacgccgcac
     1321 tcccgcgggc acaggcggca ggcggaaagc gcagacgtcg gcgcggtaag gacgtcgttg
     1381 gccctcataa ctcctcctcg ccgcagaggt accggtggaa gcgggtgaag aggtagcggg
     1441 agtcgtgcgg gccgggggac gcctccgggt ggtattgcac ggagaagcag cgcatcgagg
     1501 ggacggagag cccctccacg gttccgtcgt tcaggttcac gtgggtgatc cgggcggagg
     1561 cgccgaggga tccgggatcg acggaatagt tatggttctg gctggtgatc tcgaccttgc
     1621 ctgtcgcgag gtccttcacc ggctggttgc agccatggtg gccgaacttc agcttgaacg
     1681 tctttccccc cagcgcgagc cccatgatct aatgcccgag gcagatccca aacatcggga
     1741 cgtttccgag gagcgcgcgg accgtcgcga cggcgtacgg cacgccttcg gggtcccccg
     1801 gcccgttcga gaggaaaacg ccatccggag agagcgccag gacctccgcc gcggtgacgc
     1861 cggccggtac gacggtcaca tcgaacccgt gggagaccat catccggaga atgttctgct
     1921 tgatcccgaa gtcgatcgcg acgacccgcg ggatgcgtcc gaacttgctc cggaactcgg
     1981 cggccggcag gtaccccttc tcgaggtccc agtcccccgt ggtccaatgt accgcatggt
     2041 cggaggtgac ctccttcacc agatcgcgcc ccacgaggga agggagttcc cgtgctttcc
     2101 gcgcgaggcg atcgatgtcg tgatcggtcg ccgacaggac cgccatctgg gatcctccgt
     2161 gccgaagacg ccgcgtgagg gcgcgggtgt cgattcccgc gatcccgcag acgtgatacc
     2221 gccgaagata ggcgtcgaga gactccacgt gccgccagtt cgacggcggg ccccagggct
     2281 cgcgaacgat ga
//
LOCUS       DATGYW010000659         1962 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_97083, whole genome shotgun sequence.
ACCESSION   DATGYW010000659 DATGYW010000000
VERSION     DATGYW010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97083"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..359)
                     /locus_tag="VK429_09215"
     CDS             complement(<1..359)
                     /locus_tag="VK429_09215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92020.1"
                     /translation="MLIALERLPGVAIRIRGGERTLLMKRLAGKMILILMAFLAGMGI
                     TAMGLKKPDAFAAGLPVKSLSFGDEESSTEIYFVTDWFCPACRAAEPEILKGARKAMR
                     QAKVVFVDYPIHPETFN"
     gene            complement(749..1441)
                     /locus_tag="VK429_09220"
     CDS             complement(749..1441)
                     /locus_tag="VK429_09220"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003636663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HLN92021.1"
                     /translation="MKRRLAMAMCAAVALSGAAFAADAPELKSDKEKISYSIGMDIGG
                     NLKRGSVEVDPDILAKGLKDSYGGGKTILTEDEARKTIADFQQALRAKQAETMKKLAE
                     KNKVEGEKFLAENAKKEGVKTLPSGLQYKEITHGTGKSPKTTDTVTTHYKGTLIDGTE
                     FDSSYKRGEPASFPVSGVIAGWTEALQLMKEGAKWQLFVPSNLAYGERGAGRDIGPNA
                     TLIFEVELISVK"
     gene            1691..>1962
                     /locus_tag="VK429_09225"
     CDS             1691..>1962
                     /locus_tag="VK429_09225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009225958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched chain amino acid aminotransferase"
                     /protein_id="HLN92022.1"
                     /translation="MQITVTQVAESRRRRKPESGEPLGFGKHFSDHMFLMDHSQGPGW
                     RDARIVPYGPLSLAPSAMVLHYGQEVFEGMKAYFGRDGVLCLFRPDR"
BASE COUNT          362 a          642 c          586 g          372 t
ORIGIN      
        1 tagttgaagg tttccgggtg aatcgggtaa tccacgaaaa ccaccttcgc ctgccgcatg
       61 gcttttcggg cgcctttcag gatctccggc tcggcggcac ggcacgcggg gcagaaccag
      121 tcggtgacga agtagatctc cgtgctgctt tcctcatccc cgaaggagag ggacttcacc
      181 ggcaggccgg ccgcgaacgc gtcgggtttc ttcaaaccca tcgcggttat ccccatgccg
      241 gcgaggaacg ccattagaat caaaatcatc ttgcccgcga gccgtttcat caagagagtc
      301 ctttctccgc cacgaattcg gatcgcaaca ccgggcaatc gctccagggc gatcagcacg
      361 cacgccattg cgaccgagag ggcgatcccg acgcacagcg ggcaccacct tccaataaca
      421 tacttctgaa accagacgag aacgaattcc gagccgagtg cgccggagag cagaacgggg
      481 atcaggaaac cggagaatcg gaatcggttc cttgtgagga acgcgaggcc gcacaacgtg
      541 aaatatccga ccccgagggg ggaaagcgga aatccgaaaa tgcggtacag atgcgtttcc
      601 tcgcaaccgt cggcgcagat cccgagccag gacaggacgg aaaggatcca cgccgcggca
      661 aacggcaccg cgatccaata gccacggggc gatctcacct ttcatccatg gtcggcatga
      721 acggaaacgg tgcgaagccg gccccggctc acttcaccga gatcagctcc acctcgaaga
      781 tcagcgtggc gttcgggccg atatcccgac cggcgccccg ctctccatag gcgagattgg
      841 acggcacgaa cagctgccat ttcgctccct ccttcatcag ctggagcgcc tcggtccagc
      901 cggcgatcac ccccgaaacg gggaacgagg ccggttcgcc gcgcttgtag gagctgtcga
      961 actccgtccc gtcgatcagc gtccccttgt aatgggtcgt aaccgtgtcg gtggtcttcg
     1021 ggctcttccc ggtgccgtgc gtgatctcct tgtactggag tccgctcggg agcgtcttca
     1081 ctccctcttt cttcgcgttc tccgcgagga acttctcccc ttccaccttg ttcttctcgg
     1141 caagtttttt catcgtctcc gcctgcttcg ccctcagcgc ctgctgaaag tccgcgatcg
     1201 tcttgcgcgc ctcgtcttcg gtgaggatcg tctttccccc gccgtagctg tccttcaatc
     1261 ccttcgccaa tatgtccggg tcgacctcga cggatccccg cttcaggttt cccccgatgt
     1321 ccatgccgat gctgtagctg atcttctcct tgtcgctctt aagctccggg gcgtccgcgg
     1381 cgaacgcggc ccccgagagc gcgaccgcgg cgcacatcgc catcgcaagc cgtctcttca
     1441 tccttgccgc tcctttccgt ccgcaaccgg gtagggtgtg catccgggtt atcttacacg
     1501 ctgccccatg aaaccgaaag cggattccgg cacccgggat gccgcatgcc ggagaaccgg
     1561 aggggcggat catcgaaccg gcgcatcttc cgggatcgac gggtttgcga tataaatagg
     1621 ggccgtgtgc ggatcgatcg ccccgtgccg aaggggagag tacccgcgga accgcgggaa
     1681 gggagagggg atgcagatca cggtgacgca ggtggcggaa agccggcggc ggcggaagcc
     1741 ggaaagcggc gaaccgctcg gtttcggaaa gcacttctcg gaccacatgt tcctgatgga
     1801 ccattcccag ggaccggggt ggcgcgacgc ccgcatcgtc ccgtacgggc cgctgtcgct
     1861 cgccccttcc gcgatggtcc tgcactacgg gcaggaggtc ttcgagggga tgaaggcgta
     1921 cttcgggcgg gacggcgtcc tctgtctctt ccgtcccgac cg
//
LOCUS       DATGYW010000660         3219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_526531, whole genome shotgun sequence.
ACCESSION   DATGYW010000660 DATGYW010000000
VERSION     DATGYW010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3219
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526531"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..930
                     /gene="apgM"
                     /locus_tag="VK429_09230"
     CDS             <1..930
                     /gene="apgM"
                     /locus_tag="VK429_09230"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00306.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HLN92023.1"
                     /translation="DVAVRCNLVALKNDGAASEMEDFSAGHISTSEAAELLASLQEAV
                     ADKGVRFHTGVSYRHLMVWPGGCDGVKTTPPHDIHGKKITPYLPQGDGAEFLLTIMEI
                     SRELFSVHPVNRKRVAEGKLPGNSVWLWGQGKAPRIPTFEERFGLTGSVVAAVDLIRG
                     IGIYAGLEVVAVPGATGYIDTNYRGKAEYALRELERKDFVLIHVEAPDEAGHNGSVEE
                     KIRAIERIDQEMLTPLLARVRERGDLRILLLPDHPTPVAIRTHAQEPVPFVFYPAPPG
                     LATTPGRRYTEADGRASGQFVPAGTRLIEYLLA"
     gene            942..1361
                     /locus_tag="VK429_09235"
     CDS             942..1361
                     /locus_tag="VK429_09235"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002615223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HLN92024.1"
                     /translation="MEHVASVRVIFGDTDAAGIVYYGNYLRWFEVGRAELMRRKGFSY
                     LVTMERGFLLPVIEAGARYHASARYDDVLRIHAEIRDIRGVRLTFGYRIERDDGTSLV
                     TGHTVHAFTGRDGRPVRPPAEFRALSLSNDISRGKGV"
     gene            1364..2320
                     /gene="glpX"
                     /locus_tag="VK429_09240"
     CDS             1364..2320
                     /gene="glpX"
                     /locus_tag="VK429_09240"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002630393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HLN92025.1"
                     /translation="MERNLAMEVVRVTEAAALAAARLMGRGDNIAADQAAVTAMRKAL
                     SYVQFKGRVVIGEGERDEAPMLYIGEEVGASETPKVDIAVDPLEGTNIVSAGGYNAIA
                     VIAIAEEGGFLHAPDTYMQKLAVGPRARGVIDITASPTENLRRIAKAQKAYVEDLCVV
                     ILDRPRHEDLIREVREAGARIKLIGDGDVAGAIATSKEESGVDVLMGTGGAPEGVLAA
                     AALKCMGGDFQGILKFRNKEEIERAKGMGVTDLNRVYALDDLARSDVMFAATGVTFGD
                     FLKGVRFFSGGAFTQSVVMRSRSRTTRLIDTTHYFEFKPKYD"
     gene            2324..2548
                     /locus_tag="VK429_09245"
     CDS             2324..2548
                     /locus_tag="VK429_09245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009644294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HLN92026.1"
                     /translation="MEGSVTATGRIEIDFERCKACELCVPVCPKGCIGMGTTVNRQGY
                     GSAVFERPDDCTGCAICAETCPDACILVWR"
     gene            2545..>3219
                     /locus_tag="VK429_09250"
     CDS             2545..>3219
                     /locus_tag="VK429_09250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012531521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate dehydrogenase subunit
                     beta"
                     /protein_id="HLN92027.1"
                     /translation="MTPLAPSPTKRILTKGNEAICLGAIAAGCRHYYGYPITPQNDIP
                     EYMAAHLPALGGTFLQAESEVATINFILGTSASGKRVMTSSSGPGISLMQEGLSYMAG
                     SELPAVIVNISRSGPGLGGIAPSQGDYFQAVKGGGHGGYRLIVLAPHSVQEMYALTML
                     AFDLADKYRTPAMILGDAIVGQMKEPFIASAYDPAASVEKPWALTGCVGRERRNVKSL
                     HLKDYAI"
BASE COUNT          581 a         1025 c         1098 g          515 t
ORIGIN      
        1 gacgtcgccg tccgctgcaa tctggtggcc ctgaaaaacg acggggccgc ctccgagatg
       61 gaggatttct ccgccggcca tatctccacc agcgaggcgg cggagctcct cgcctccctt
      121 caggaagcgg ttgccgacaa gggggtccgg ttccacacgg gcgtgtcgta tcgccacctc
      181 atggtctggc ccgggggatg cgacggagtg aagacgaccc cgccgcacga catccatggg
      241 aagaagatca ccccctacct tccccaaggg gacggcgcgg agtttctcct gacgatcatg
      301 gagatctcac gggaactttt ctccgtccac ccggtgaatc ggaagagggt ggcggagggg
      361 aagcttccgg gcaactccgt atggctctgg gggcagggga aggccccccg catccccacg
      421 ttcgaggaga gattcggcct gacaggatcc gtggtcgccg cggtggacct catcaggggg
      481 atcgggatct acgccgggct tgaggtggtc gccgtgccgg gcgccaccgg atacatcgac
      541 acgaactacc gcgggaaggc ggaatacgcc cttcgtgaac tcgagcggaa ggacttcgta
      601 ctcatccacg tggaggcccc ggacgaggca ggacacaacg gaagcgtcga ggagaagatc
      661 cgcgcgatcg aacgaatcga ccaggagatg ttgacccctc tcctcgcgag ggtgcgggag
      721 cggggggacc tccggattct cctcctgccg gaccacccga cccccgtcgc catccggacc
      781 cacgcgcagg agccggtacc gttcgtcttc taccctgcgc ccccgggatt ggccacgacc
      841 ccggggaggc gatacacgga agcggacggg cgcgcctcag ggcaattcgt cccggcggga
      901 acccggctga tcgaatacct gctcgcctga cgggagttcg cgtggagcat gtcgcatccg
      961 taagggtgat cttcggcgac acggacgccg ccggcatcgt ctattacggg aattaccttc
     1021 gctggttcga ggtcggccgg gcggagttga tgcggcggaa agggttttcg tacctcgtca
     1081 cgatggagcg ggggttcctc ctccccgtca tcgaagcggg cgcccgctac cacgcatccg
     1141 cgcggtacga cgacgtgctc aggatccacg cggagatccg cgacatccgg ggggtgcgcc
     1201 tgacgttcgg gtaccggatc gagcgggacg acgggacttc cctggtgacg ggacataccg
     1261 tgcatgcttt cacgggaagg gacgggagac cggtgcggcc tcccgcggag tttcgcgcgc
     1321 tgtctctttc gaacgacatt tcccgcggaa agggggtctg acgatggaac ggaacctggc
     1381 aatggaggtc gttcgtgtta ccgaggcggc ggcgctcgcc gcggcgcggt tgatggggcg
     1441 gggggacaac atcgccgcgg accaggcagc agtcaccgcg atgcgcaagg cgctgagcta
     1501 cgtccagttc aaagggcgcg tcgtcatcgg ggaaggggag cgggacgaag cccccatgct
     1561 ctacatcggg gaggaggtcg gcgcctcgga aactccgaag gtcgacatag ccgtcgaccc
     1621 cctcgaggga acgaacatcg tgtctgccgg cgggtacaac gccatcgccg tgatcgcgat
     1681 cgcggaagaa ggcgggtttc tccatgctcc cgacacctac atgcagaagc tcgcggtggg
     1741 gccgagggcg cgcggcgtga tcgacatcac ggcgtctccc acggagaacc tgcgcaggat
     1801 cgcgaaggcg cagaaggcct acgttgagga cctctgcgtg gtgatcctcg accggccgcg
     1861 gcacgaggat ctgatccggg aggttcggga agccggggcg cgaatcaagc tgatcgggga
     1921 cggcgacgtg gcgggagcga tcgcgacgtc gaaggaggag tccggggtcg acgtactcat
     1981 gggtacgggg ggcgcgcccg aaggggtcct cgccgccgcg gcgctgaaat gcatgggcgg
     2041 cgacttccag ggcatcctca agttccggaa caaggaagag atcgagcgcg ccaaggggat
     2101 gggggtgacc gacctgaacc gcgtctacgc cctcgacgac cttgcgagaa gcgacgtgat
     2161 gttcgccgct accggtgtca ccttcggcga tttcctgaag ggcgtccggt tcttcagcgg
     2221 cggcgcgttc acccagtccg tcgtcatgcg ctcccgctcc cgcactaccc ggctcatcga
     2281 cacgacccac tatttcgagt tcaagccgaa atacgattaa cccgtggagg gtagcgtcac
     2341 ggcaacggga cggatcgaaa tcgatttcga gcggtgcaag gcgtgcgaac tgtgcgttcc
     2401 cgtctgcccg aaggggtgca tcgggatggg cacgaccgtc aaccggcagg gatacgggtc
     2461 cgccgtcttc gaacgtcccg atgactgcac gggctgcgcg atctgcgccg agacgtgccc
     2521 cgacgcgtgc atcctggtgt ggagatgacc ccgctggcgc cgtcccccac gaagcggatc
     2581 ctcaccaagg gaaacgaggc gatctgcctc ggggcgatcg cggccgggtg ccgtcactat
     2641 tacggctacc cgatcacccc ccagaacgac atcccggaat acatggcggc gcacctgccg
     2701 gctctcggcg gcacgtttct gcaggccgag agcgaagtcg cgacgatcaa cttcatcctc
     2761 gggacctccg cctccgggaa gcgtgtgatg acctcctcgt cgggccccgg gatctccctg
     2821 atgcaggaag ggctatccta catggcggga tccgagcttc ccgcggtgat cgtcaacatt
     2881 tcccggtcgg ggcccggcct cggcggcatc gccccctccc agggggatta cttccaggcg
     2941 gtcaagggcg gcggccacgg cgggtatcgc ctgatcgtcc tggctccgca ctcggtccag
     3001 gagatgtacg ccctcaccat gctcgccttc gacctggcgg acaagtaccg cactcccgcc
     3061 atgatcctcg gggacgccat cgtcggccag atgaaggaac cattcatcgc gtccgcctac
     3121 gatccggcgg cgtcggtgga gaaaccgtgg gcgttgaccg gctgcgtagg acgcgaacgc
     3181 aggaacgtga agtcccttca cctgaaagac tacgccatc
//
LOCUS       DATGYW010000661         2109 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_205677, whole genome shotgun sequence.
ACCESSION   DATGYW010000661 DATGYW010000000
VERSION     DATGYW010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2109)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2109)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2109
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205677"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            75..422
                     /locus_tag="VK429_09255"
     CDS             75..422
                     /locus_tag="VK429_09255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007062749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HLN92028.1"
                     /translation="MSPMYCEKFRIPKHLEIADGAVVPAPVGEQPMMKTGNWRTERPV
                     IDHEKCTTCLNCFAYCPDSCWHFDEKAEKMVWNPIYCKGCRVCVEVCPVDALSLVNEL
                     NFKGGMARLEKPY"
     gene            443..1636
                     /locus_tag="VK429_09260"
     CDS             443..1636
                     /locus_tag="VK429_09260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013275279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate ferredoxin oxidoreductase"
                     /protein_id="HLN92029.1"
                     /translation="MPRETVMAGCSAAANGAKLARVEVISSYPIRPYTGIMMELSRMV
                     ADGELDAEFIHGEGEHAQVSIAQGASASGARAYTGSSGVGVAYAMEVYSPISGGRYPV
                     QMTIADRAYDPPGDFGSEHTDVMSCCDQGWILGWAETPQEILDNTIMYYKIGEDPKVM
                     LPQWAVQDGYFVSHIPGKVSIPDQAAVDEYLPPYNCPHALNPKNPTNHGPQIFPDQGP
                     AIDLQRAQAFLNTPKVIEKAVADYNKQFGRNYAPFLEEYKTDGADYVFFLQGAHCRTA
                     RFAVDHLRKKGAKVGMVKLRFVRPWPTEKIVEVLSKFKAVGVIESSTSYGGAMKGGKL
                     QHEVRASLYDSPKQPAVTSFMAGLGGEVIKLDEFYNMAKILETAAKKGKVDQYVYWVG
                     FDNGI"
     gene            1675..>2109
                     /locus_tag="VK429_09265"
     CDS             1675..>2109
                     /locus_tag="VK429_09265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014807229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HLN92030.1"
                     /translation="MAQIPTQQMEMVKNLRGIDQKEYYVPGHRTCAGCGPALCYKLVA
                     KAAGADSIFLGPTGCMYVANCSYMCTPFAMPWTHCQITNGGAVASGIEAAYNVLIRKG
                     KYKGNLPNIVVMAGDGGAIDIGLQAMSAMMYRGHDVLFVMYDN"
BASE COUNT          464 a          655 c          643 g          347 t
ORIGIN      
        1 acaagggcgc cgtgaaagaa ggggccaaga ccgctgtagt gaaatcctta taaggcacgg
       61 aaggagaaga aaacatgagt ccaatgtact gcgaaaagtt ccggattccc aagcaccttg
      121 agatcgccga cggcgccgtg gtcccggccc ccgtaggcga gcagccgatg atgaagaccg
      181 ggaactggcg gaccgagcgt cccgtcatcg atcatgaaaa gtgcacgacc tgcctgaact
      241 gctttgccta ctgcccggac tcctgctggc acttcgacga gaaggccgaa aagatggtct
      301 ggaacccgat ctactgcaag ggctgcaggg tctgcgtcga ggtgtgcccg gtggatgccc
      361 tctcgctcgt gaacgagctg aatttcaaag gcggcatggc ccgtcttgaa aagccttact
      421 agattccaag gaggagaaac acatgccgag agaaactgtc atggcgggtt gttccgccgc
      481 tgcgaatggc gccaaattag caagagtaga ggtcatcagc tcgtacccga tccgcccgta
      541 caccggcatc atgatggagc tttccaggat ggtggcggac ggggagctcg atgcggaatt
      601 catccacggt gagggcgaac acgcccaggt ctccatcgcc cagggcgctt ccgcgtccgg
      661 cgcgagggcg tacacgggaa gctcgggcgt cggcgtcgcc tacgcgatgg aggtctactc
      721 ccccatctcg ggcggccggt atccggtcca gatgaccatc gccgaccggg cctacgatcc
      781 ccccggcgac ttcggttccg agcacacgga cgtcatgagc tgctgcgacc agggatggat
      841 cctgggctgg gccgagacgc cgcaggagat cctcgacaac accatcatgt attacaagat
      901 cggcgaagac ccgaaagtca tgctgcccca gtgggcggtg caggacggct acttcgtctc
      961 ccacatcccc ggcaaggtca gcattccgga ccaggcggcg gtcgatgaat accttccgcc
     1021 gtacaactgc ccgcacgcgt tgaatcccaa gaatccgacg aaccatggtc cccagatctt
     1081 cccggaccag ggcccggcga tcgacctgca gagagcgcag gcgttcctga acaccccgaa
     1141 agtgatcgag aaggccgtcg ccgactacaa caagcagttc ggccgcaact acgcgccgtt
     1201 cctcgaagag tacaagaccg acggcgccga ctacgtcttc ttcctccagg gcgcgcactg
     1261 ccgcaccgcc cggtttgccg tcgaccacct ccggaaaaag ggagccaagg tcggcatggt
     1321 gaagctccgc ttcgtccgtc cctggccgac cgagaagatc gtcgaagtcc tttccaagtt
     1381 caaggccgtc ggtgtcatcg agtccagcac ctcgtacggc ggcgccatga agggcgggaa
     1441 gctccagcac gaagtccgcg cctccctgta cgattcgccg aagcagcccg cggtcacgtc
     1501 gttcatggcc ggcctgggcg gcgaagtcat caagctcgac gagttctaca acatggcgaa
     1561 gatcctcgaa acggccgcga agaaggggaa ggtcgatcag tacgtctact gggtcgggtt
     1621 cgacaacgga atctagtaaa aaaccgctga gaagcataca aggagtgaaa taatatggca
     1681 caaattccga cgcaacagat ggaaatggtc aagaatctgc gcggcatcga ccagaaggag
     1741 tactacgttc ccggtcaccg gacctgcgcg ggctgcggcc cggccctctg ctacaagctg
     1801 gtcgccaagg cggcgggcgc cgactcgatc ttcctcggcc ccacgggttg catgtacgtg
     1861 gcgaactgca gctacatgtg caccccgttc gccatgccct ggacgcactg ccagatcacg
     1921 aacggcgggg ccgtcgcctc cggcatcgag gcggcctaca acgttctgat ccgcaagggg
     1981 aagtacaagg ggaacctgcc gaacatcgtc gtcatggcgg gcgacggcgg cgcgatcgac
     2041 atcgggctcc aggcgatgtc cgccatgatg taccgcgggc atgacgtcct cttcgtcatg
     2101 tacgacaac
//
LOCUS       DATGYW010000662         1694 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_97430, whole genome shotgun sequence.
ACCESSION   DATGYW010000662 DATGYW010000000
VERSION     DATGYW010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97430"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="VK429_09270"
     CDS             <1..227
                     /locus_tag="VK429_09270"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HLN92031.1"
                     /translation="VSGFGNVLIVQHGGGLFSVYGRLETFLVKQGEVVKKGTVVGSLP
                     GSPTGKSVLYLELRAGGTAIDPSSAIPLER"
     gene            243..1640
                     /locus_tag="VK429_09275"
     CDS             243..1640
                     /locus_tag="VK429_09275"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HLN92032.1"
                     /translation="MEPTGVAPRKTVGRKWLGTVLVVAVFVGGFVVGDLTTSRHAAQA
                     NVAYSKLKLFGDVLSIIQSSYVEEVNVDNLVRGAVNGMVQTLDPHSSYLTPEMLKQVE
                     VETKGAFGGLGIEIGMKDGFLTVIAPIEDTPAARAGLQAGDKIIKIENESTKNMNVMD
                     AVKRLRGEPGSKVTITVARESLPEPKAYTLTRDIIKIKSVKSKSMGDGIGYIRLTQFQ
                     QDSHQEVERALQGFLKEKGGMKGLILDLRNNPGGLLDQAVRIADEFIDAGLIVYTDGR
                     VEAQKTKYVAHKEGTYTGFPIVVLVNAGSASASEIVAGALQDHGRAIIIGQRTFGKAS
                     VQTILPLEDGSALRLTTARYYTPNGRSIQAKGIEPDIVVSDGREPPEGHAGMLREKDI
                     ERHLKGEGEEPPAPVVVPKEEKKGDRNGGKKEPPREPEVRPGDAKDPQLDRAVELLKG
                     WEIFKSRFIDRKKAS"
BASE COUNT          358 a          486 c          604 g          246 t
ORIGIN      
        1 ccgtctccgg gttcgggaac gtgctgatcg tgcaacacgg cggcggactc ttttccgtgt
       61 acggacgtct ggaaacgttc ctcgtgaagc agggcgaggt ggtaaaaaaa gggaccgttg
      121 tggggagcct gccgggatcg ccgaccggga aatcggtgct atacttggaa ctgcgggcgg
      181 gaggcaccgc catcgatccg tcctccgcca ttccactcga gcgataagga gccgacaagc
      241 gcatggagcc aacaggggtt gcaccccgca agacggtggg gaggaagtgg cttggaaccg
      301 ttctggtcgt cgcggtgttc gtcggagggt tcgtggtggg cgatctcacc acctcccggc
      361 atgccgcgca ggcgaacgtc gcctacagca agctgaagct cttcggcgac gtcctctcga
      421 tcatccagag cagctacgtc gaggaggtga acgtcgacaa cctcgtccgg ggggccgtga
      481 acgggatggt gcagaccctc gatccgcaca gttcctacct gacgccggag atgctgaagc
      541 aggtcgaggt cgagacgaag ggggcgtttg gagggctggg aatcgagatc gggatgaagg
      601 acgggttcct cacggtgatc gctcccatcg aggacacgcc cgcggcgcgc gccggcctgc
      661 aggccgggga caagatcatc aagatcgaga acgaatcgac caagaacatg aacgtgatgg
      721 acgcggtgaa gcggctccgg ggagagccgg ggagcaaggt gacgatcacg gtggcgcggg
      781 aatcgctgcc cgaaccgaag gcctacaccc taacgcgcga catcatcaag atcaagagcg
      841 tcaagtccaa gtcgatgggg gacgggatcg gctacatccg gctgacgcag ttccagcagg
      901 actcccacca ggaggtcgaa cgcgccctgc aggggttcct gaaggagaag ggggggatga
      961 aagggctcat cctcgacctg aggaacaacc cgggcgggtt gctcgaccag gcggtccgga
     1021 tcgcggacga gttcatcgac gcggggctca tcgtctacac cgacggccgg gtcgaggccc
     1081 agaagacgaa gtatgtggcc cacaaggaag ggacgtacac cgggttcccg atcgtcgtgc
     1141 tggtgaacgc cggttccgcc tccgcctccg agatcgtcgc cggcgcgctg caggatcacg
     1201 gccgggcgat catcatcggc cagcgcacct tcggcaaggc gtcggtccag acgatccttc
     1261 cgctggaaga tggctccgct ctccggttga cgacggcgcg gtactacact cccaacgggc
     1321 ggtcgatcca ggcgaagggg atcgagcccg acatcgtcgt ctcggacggc agggagcctc
     1381 ccgaagggca cgcggggatg ctccgggaga aggacatcga acggcacctg aaaggggaag
     1441 gagaggaacc tccggcgccg gtcgtcgttc cgaaggagga gaagaagggg gaccggaacg
     1501 gcgggaagaa ggaaccccca agagagcccg aagtccgtcc gggggacgca aaggaccccc
     1561 aactcgatcg cgcggtcgaa ctcctgaagg ggtgggagat cttcaagtcc cggttcatcg
     1621 accggaagaa ggcgtcctga ccggtcggaa tatgccgggg acatctctgg ggggtacggg
     1681 taccggaagg aagc
//
LOCUS       DATGYW010000663         1902 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_263081, whole genome shotgun sequence.
ACCESSION   DATGYW010000663 DATGYW010000000
VERSION     DATGYW010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1902)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1902
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263081"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..126
                     /locus_tag="VK429_09280"
     CDS             <1..126
                     /locus_tag="VK429_09280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HLN92033.1"
                     /translation="MNSMKKKEEAPPATKECPHCLSTIPIKATRCGHCTSELRAA"
     gene            complement(227..811)
                     /locus_tag="VK429_09285"
     CDS             complement(227..811)
                     /locus_tag="VK429_09285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HLN92034.1"
                     /translation="MKTLALLGTVTGIALFAGIRLYATVLTVGLCLRYGLLHLPQELA
                     SLSVLSHPYVLGAAGVCAVMEFLADKVPWVDSLWDAVHAFLRPAGAALIAFAAVGRLD
                     PATEIAVILLCGGVAFSSHSAKAGARLLVNQSPEPFSNILLSLSEDVVAVGGSYAAVA
                     HPLAILAVVATFLGLFALLARRIYRRLRRDRDPP"
     gene            968..>1902
                     /locus_tag="VK429_09290"
     CDS             968..>1902
                     /locus_tag="VK429_09290"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HLN92035.1"
                     /translation="MRYLILGCGPAGIAAAKAIRGKDKKGEIVIATEEQSPPYLRPLL
                     TDLIMGRVDVAGIADPQAKDLADQGIGVRNGKRALKVDSAGNRVIFADGEEEAYDVLL
                     IATGGKLEIPLPLRKEHPAIFPFDSLEDTLRIGERVPRSGTVVVYGPGFLAIVASSAL
                     RKRGNDVVWFQPDTPRSSYPISGELEANILDSVRNTGVRILDGQDIAAVRETMDGIEL
                     ESTEKGERVRCLAVVVATERLPAVGFLAGSGVKTVTGIIVDDYLRTNVQNIYAAGDCA
                     ELFDKKTRTARINFGWRSAIKQGRLAGENMAGGGK"
BASE COUNT          389 a          578 c          647 g          288 t
ORIGIN      
        1 atgaactcca tgaagaagaa ggaagaggcc cccccggcaa cgaaggagtg cccgcattgc
       61 ctgtcgacca tccccatcaa ggcgacgcga tgcggtcact gcacttcgga actgagggcc
      121 gcatagggga gagcgttcga agacagttgg tgatgatcgg gagcgttgtt tccggccagg
      181 agataacgct ccctgcagta tcggaacgtc gccctgcgcc cgtatttcac ggtgggtcgc
      241 gatctctccg caaacggcgg tagatccgcc gggcgaggag agcgaacagg ccaaggaagg
      301 tggctacaac ggcgaggatg gcaagcgggt gcgcgaccgc ggcgtagctt ccgcccacgg
      361 ccacgacgtc ctcgctcagg ctcagcagga tgttgctgaa cggttccggg ctctggttca
      421 caaggagccg ggcccccgcc ttcgcggaat gggaggagaa ggccacccct ccgcacagca
      481 ggattacggc gatctcggtc gccgggtcca accggccgac ggccgcaaag gcgatcaacg
      541 ccgcaccggc aggccgcagg aaggcgtgga ccgcgtccca cagggaatcc acccagggca
      601 ccttgtccgc gaggaactcc atgacggcgc agacgcctgc ggcgcccagc acatacgggt
      661 gggagaggac ggatagagat gcgagttcct gcggcaggtg gagcagcccg taccgaaggc
      721 aaagcccgac cgtgagaacg gtcgcgtaga gacggattcc ggcaaagagc gcgatccccg
      781 tcactgttcc aaggagcgcg agcgtcttca tcctttgatt atagactccc cttgacagga
      841 tcaggggtcg gctcccgcct cgtcgaggaa ggattcgcac tatataatat taatcggttc
      901 tgaaggagct ccgcgcgcat ggaaccgctg accgtgggtc caatgcgaac tcttcaggag
      961 gtgcaccatg aggtacctga ttctggggtg tggccccgcc ggaatcgccg cggcgaaggc
     1021 gatccgcggc aaggacaaga agggcgagat cgtcattgcg accgaggagc agtccccccc
     1081 gtacctgagg ccgctcctga ccgatctgat catggggcgg gtcgacgttg cggggatcgc
     1141 ggatcctcag gcaaaggacc tggccgacca gggaatcggc gtccgaaacg ggaaaagggc
     1201 gctgaaggtt gactccgccg ggaaccgggt gatcttcgcc gacggcgaag aggaggcgta
     1261 cgacgtcctg ctcatcgcca ccggagggaa gctggagatc cctttgccgt tgcgcaagga
     1321 acatccggcg atctttccct tcgactccct cgaggacacc ttgcggatcg gggaacgggt
     1381 cccgcggtcc gggacagtcg tggtctacgg gccggggttc ctcgccatcg tcgcgagcag
     1441 cgcgctccgg aagcggggaa acgatgtggt ctggttccag cccgacaccc cccggtccag
     1501 ttacccgatc tcgggagagc tcgaagcgaa catcctcgac tcggtccgaa acacgggggt
     1561 gcgtatcctc gacgggcagg acatcgcggc cgtgcgggaa acaatggatg gaatcgagct
     1621 cgaatccacc gaaaaagggg agagggtccg ctgcctcgct gtcgtggtgg ccaccgagcg
     1681 cctcccggcg gtcggtttcc tggccggcag cggcgtgaaa accgtcaccg ggattatcgt
     1741 tgacgactat ctccggacca acgtccagaa catctacgcc gcgggcgact gcgccgagtt
     1801 gttcgacaag aagacccgga ccgcccggat caacttcggg tggagaagcg ccatcaagca
     1861 ggggcgcctc gccggggaga acatggccgg gggcgggaag ca
//
LOCUS       DATGYW010000664         1711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_526725, whole genome shotgun sequence.
ACCESSION   DATGYW010000664 DATGYW010000000
VERSION     DATGYW010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_526725"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1711
                     /locus_tag="VK429_09295"
     CDS             <1..>1711
                     /locus_tag="VK429_09295"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HLN92036.1"
                     /translation="DTLKRRVLDAVRTRERVLRLEYRLLHRDGSVRWVADRRQMIYGE
                     DGKLRWVDGLILDITDRKRSDVALRLTQFTVDRGSESIYWMGPDGNFIYVNDRTCEAL
                     GYTREELLSMKIQEINPEFPPERWRHHWDELRERRTFSAESTHRAKDGHLIPVEIRAN
                     YIEFDGREYNCVYARDITARKRDEALILLERDFSKAVLDSLPGIFYLFDRMGKFLRWN
                     TNFEEITGYSAEEIGRMHPLDLFAGTDKALVQERITEVFVKGASEGEAELVTKSGKRM
                     TYYFTGHAFHGKEEPCLIGTGIDISERKKLEEQLRKSQKMEAMGLLAGGIAHDFNNLL
                     TGILGYANLLSINERVNPEVARAAGIIQRSAEKASQLTAQLLGFAEQGKNLNVPVELG
                     RVIASVAGVLERTQDPCIRIVASLRPEGGCVLGDPSQLDQVVMNLAINACDAMPRGGQ
                     LKFTTEPMTIDEAFCRERDWMSPGKYLLLSVADTGVGISPENLERIFDPFFTTKAKGK
                     GTGLGLSMVFGIVKNHGGCIDVRSEAGAGTVFRVYLPESSEAAPEEAALDTALPRGRG
                     RILL"
BASE COUNT          337 a          507 c          581 g          286 t
ORIGIN      
        1 ggacacgctg aagcggcgtg tcctcgatgc cgtgcggacc cgcgagcgcg tcctccggct
       61 cgagtaccgc cttctgcacc gggacggttc cgtccggtgg gtggcggacc gccgccagat
      121 gatctacggc gaggacggga agttgcggtg ggtcgacggc ctcatcctcg acatcaccga
      181 ccggaagcga tcggacgtcg cgttgcgcct cacccagttc accgtcgacc ggggaagcga
      241 atccatctac tggatgggcc cggacggcaa cttcatctac gtaaacgacc ggacgtgcga
      301 ggcgctcggc tatacgcggg aagagctcct ttccatgaag atccaggaga tcaatccgga
      361 gttccccccc gagcggtggc ggcaccactg ggacgagttg cgggagcgga gaaccttctc
      421 ggccgaatcg acgcaccgcg cgaaggacgg ccatctcatc cccgtggaga tcagggcgaa
      481 ctacatcgaa ttcgacggga gggaatacaa ctgcgtctac gcccgcgaca tcaccgctcg
      541 caagcgggac gaagcgctga tcctgctgga acgggatttc tcgaaagcgg tcctcgacag
      601 cctgccggga atcttttacc tgttcgaccg gatggggaag ttcctgcgct ggaataccaa
      661 tttcgaggaa atcaccggat actccgcgga ggaaatcggc aggatgcatc cgctggacct
      721 gttcgccggt acggacaagg ccttggtcca ggaacggatc acggaggttt tcgtgaaagg
      781 agcctcggaa ggcgaggcgg aacttgtcac gaaaagcggg aagaggatga cctattactt
      841 caccgggcat gccttccacg ggaaagaaga gccgtgcctg atcggcacgg ggatcgacat
      901 ttccgagcgg aagaaactgg aggaacagct gcgcaagtcc cagaagatgg aggcgatggg
      961 cctgctcgcg ggggggatcg cccatgactt caacaacctg ctgaccggca tcctcgggta
     1021 tgcgaacctg ctctccatca atgagagggt caacccggag gtcgccaggg ccgccgggat
     1081 catccagcgg tcggcggaga aggcttccca gctgacggcc caactgctcg ggttcgcgga
     1141 acaggggaaa aacctgaatg tgccggtgga acttggccgg gtgatcgcgt ccgtggccgg
     1201 cgttctcgag aggacgcagg atccgtgcat ccggatcgtc gcatcgctcc gtcccgaggg
     1261 gggatgcgtc ctgggggatc cgtcccagct ggaccaggtc gtcatgaacc tggccatcaa
     1321 cgcgtgcgac gccatgcccc gtggggggca gttgaagttc accaccgaac cgatgacgat
     1381 cgacgaggcg ttttgccggg agcgggattg gatgtccccc gggaagtatc ttctcctctc
     1441 cgtcgccgat acgggcgtcg gcatttcccc ggagaacctg gagcggatct tcgacccgtt
     1501 cttcacgacg aaggccaagg gaaaggggac ggggcttggc ctgtcgatgg tcttcgggat
     1561 cgtgaagaac cacggcggct gcatcgacgt ccggagcgag gcgggggccg gcaccgtatt
     1621 cagggtctat ctcccggaga gttccgaggc cgctccggag gaggcggcgt tggacacggc
     1681 cctccctcgc gggcgcggaa ggatcctgct g
//
LOCUS       DATGYW010000665         1868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_205876, whole genome shotgun sequence.
ACCESSION   DATGYW010000665 DATGYW010000000
VERSION     DATGYW010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205876"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..515)
                     /locus_tag="VK429_09300"
     CDS             complement(<1..515)
                     /locus_tag="VK429_09300"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HLN92037.1"
                     /translation="MADVFEVTIWARGVTQDMEGRHLSLVIANAAAKGGKFTQAWDNY
                     ADLPDRVQVPLRKYARISDEEIEMRYLYENDNPELVFVMDDTIIKGINIVRGMKKGGT
                     IVVNTKRPAEELLALIPEKDLLKAFVTVDATGIIGGSGLDSVDFMGSEGGTEAVSVAV
                     GLAAPMVGAAT"
     gene            complement(580..1338)
                     /locus_tag="VK429_09305"
     CDS             complement(580..1338)
                     /locus_tag="VK429_09305"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HLN92038.1"
                     /translation="MRHKSQMFKPIKKSKVYEEIVAKIKDMVEKGRFKSGDQLPVERE
                     LAEVFRVSRSSVREALRSLESQGFIESRQGDGTYIASQPVESLVSPLASVISTEKDDQ
                     MELFEMRRMIEPDLAYLAAERATEEEIDMMEKVLALQEEKLALGESGTDVDKNFHYIM
                     ARAAKNKAILRITDNVMDLLAESREQYLQVEGRPQKSILRHREVLEAIRARNPVRAEE
                     CMREHLVDIETSLFGATGRRKSNRGIVTSLKERR"
     gene            complement(1366..>1868)
                     /locus_tag="VK429_09310"
     CDS             complement(1366..>1868)
                     /locus_tag="VK429_09310"
                     /inference="COORDINATES: protein motif:HMM:NF012234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HLN92039.1"
                     /translation="LFFDEIEAMAPARTAEDSGQVSQRIVSQLFRELDGLPSSLGIAV
                     VAATNRIDLMEPALLRAGRFDSIIEFPLPEKEERVEILELYMQSLPFRTEVDVELLAG
                     MSEGWTGAELEALCKKAVVLVLEESLAGGGKLDYMLLKLTTKHFDRAIEKNGASSRIR
                     PREMKH"
BASE COUNT          303 a          606 c          535 g          424 t
ORIGIN      
        1 ttggtcgctg cgccgaccat cggcgcggcc aggccgacgg ccacggagac ggcttccgtg
       61 ccgccttccg aacccatgaa gtcgacgctg tcgaggccgc tgccaccgat gatcccggtg
      121 gcgtccacgg tgacgaacgc cttcagcagg tccttttccg ggatcagtgc aaggagttcc
      181 tcggcgggac gcttggtgtt gacgacgatc gttccgccct tcttcatccc gcggacgatg
      241 ttgatcccct tgatgatcgt gtcgtccatg acgaatacga gctcggggtt gtcgttctcg
      301 tacaggtagc gcatttcgat ctcttcgtcg ctgatgcggg catacttgcg aagcggaacc
      361 tggacgcggt ccggaaggtc cgcgtagttg tcccaggcct gggtgaactt gccgcctttt
      421 gccgcagcgt ttgcgatcac gagcgacagg tgtcttcctt ccatgtcctg ggtcacaccg
      481 cgagcccaga tcgttacctc aaatacatct gccattgtgt ctttcctcct tcttttgtct
      541 acgatacgga ttggtacgaa ctgcccggcg aatccccgtt cacctccttt ccttgagact
      601 ggtgacgata ccccgattcg atttccgtct cccggttgcc ccgaaaagac tggtctcgat
      661 atccaccaag tgctcgcgca tgcactcctc ggcccgtacc ggattcctgg cacggatcgc
      721 ttcgagcact tccctgtggc gcaaaatgga tttctggggt cttccctcca cctggaggta
      781 ctgctcgcgg ctctccgcga ggaggtccat cacgttgtcg gtgatgcgca gtatggcctt
      841 gttcttcgcg gccctcgcca tgatgtaatg gaaattcttg tcgacgtccg ttccggattc
      901 ccccagggcg agcttctctt cctggagggc gaggaccttc tccatcatgt cgatctcttc
      961 ctctgtggcc cgttccgccg cgagataggc aagatccggc tcgatcatcc ggcgcatctc
     1021 gaaaagctcc atctgatcgt ctttctcggt ggatatgacg gaggcaaggg gactgaccag
     1081 ggactcgacg ggctggctcg cgatgtacgt gccgtctccc tggcggctct cgatgaatcc
     1141 ctggctctcc agggagcgga gagcttcccg tacggaggac cggctcaccc ggaaaacctc
     1201 ggccaactcc cgttccaccg gaagctggtc tcccgacttg aaccggcctt tctcgaccat
     1261 gtccttgatc ttggcaacga tctcctcgta taccttcgac ttcttgatcg gcttgaacat
     1321 ctgcgattta tgcctcaccc ttgctccttc aggcatggaa cgggatcagt gcttcatttc
     1381 gcggggccgg atccgcgagg aggcgccgtt cttttcgatc gcccggtcga aatgcttcgt
     1441 cgtgagcttg aggagcatgt aatcgagctt cccgccgccg gcaaggctct cttccaggac
     1501 cagcacgacc gccttcttgc agagggcctc gagctcggcc ccggtccacc cctcgctcat
     1561 gccggcgagg agctcgacgt cgacctcggt ccggaacggc agcgattgca tgtacaactc
     1621 caggatctcg accctctcct ccttttcggg gagggggaat tcgatgatgg aatcgaagcg
     1681 tcccgcccgg agcaacgccg gctccatcag gtcgatccgg ttcgtcgcgg cgacgaccgc
     1741 gatcccgagc gagctcggca gcccgtcgag ctcccggaac agctggctga cgatccgctg
     1801 ggagacctgg ccggaatctt ccgcggtccg ggccggcgcc atggcttcga tctcgtcgaa
     1861 gaacagga
//
LOCUS       DATGYW010000666         2229 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_206026, whole genome shotgun sequence.
ACCESSION   DATGYW010000666 DATGYW010000000
VERSION     DATGYW010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2229)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206026"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1218
                     /locus_tag="VK429_09315"
     CDS             <1..1218
                     /locus_tag="VK429_09315"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HLN92040.1"
                     /translation="GALQPMSQAILLETFPPKEHGMAMAIFGIGAMFGPIAGPLMGGY
                     ITDTLSWRWIFYVNIPIGLFAVLMISMFIQDPPYMKRQGGVKVDAWGIALLTVWVGAL
                     QIVVDKGQREDWFHSDFILVLSAVAALALILFVIVELFFAEHPVVDLRAFRNLSFSTG
                     NVVMFVAFFNLLGSIVLLPLYAQLLLGYTATLAGLVLSPGGVATLIVMPIVGRFIGRH
                     NPKYPLFLGIAVCALSTWMMSNFSLAADFNALAWPRIYLGIGMGLLFIPLTTLTLSSI
                     PKPQMGNATAIYNLLRNLGGSIGVSFSATMFAHRAQVHQSRMVEHLTTLDEGLRAAVA
                     KGQALLPSRGVPEAMAGNTALGRIYGELVRQATMMGFNDAFYILSVMMACVLPLLLLL
                     RRPSHQTETAAGH"
     gene            1241..1831
                     /locus_tag="VK429_09320"
     CDS             1241..1831
                     /locus_tag="VK429_09320"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HLN92041.1"
                     /translation="MTTTTRSRAILATASRLFAEKGYSQTTTAEIAREAGVAEGTLYH
                     HFGSKDGIFLPLFDETMEGYLDGIEEILARETTGRETLSAFARFHFDYVSLRKEQYLI
                     LLRDFPVHLTVEHFARLSPQRGKLDRITELFSRILARGKADGTLHLPFPVRATAEMLR
                     GSFYGTTRLKMLDLIQAPFPQLARMMESHWLKALAP"
     gene            complement(1812..>2229)
                     /locus_tag="VK429_09325"
     CDS             complement(1812..>2229)
                     /locus_tag="VK429_09325"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HLN92042.1"
                     /translation="VMNRIEEIFRGDRLIQEFGMKLIEGREGYAKVSAVVEDRFLNAH
                     AIGHGVLLFAVADAAFALSVNAAVDAVGVQWSINVFRAAKPGETVFGESRILHKGRQS
                     MVCELTVTAGDGRVLAKGQSTALPVSREAFATVRAP"
BASE COUNT          352 a          786 c          689 g          402 t
ORIGIN      
        1 ggggcgcttc agccgatgtc gcaggcgatc ctgctcgaga cgttcccgcc gaaggaacac
       61 gggatggcga tggccatctt cggcatcggc gccatgttcg gccccatcgc cggccccctg
      121 atgggcgggt acatcacgga caccctctcg tggcggtgga tcttctacgt caatatcccg
      181 atcgggctct tcgccgtcct catgatttcg atgttcatcc aggatccgcc gtacatgaag
      241 cggcagggcg gggtgaaggt ggacgcctgg ggaatcgccc tcctcaccgt ctgggtgggt
      301 gcgctccaga tcgttgtgga caaggggcag cgggaggact ggttccactc cgacttcatc
      361 ctcgtcctgt cggccgtcgc cgcgctggcg ctcatcctct tcgtgatcgt cgagctgttc
      421 ttcgcggagc acccggtcgt cgacctgagg gcgttccgga acctctcgtt ctccaccgga
      481 aacgtcgtga tgttcgtcgc cttcttcaac cttctcggca gcatcgtcct cctccccctc
      541 tacgcccagc tgctcctcgg gtacacggct acgctcgcgg ggctcgtcct ttcccccggg
      601 ggggtcgcca cgctcatcgt gatgccgatc gtggggaggt tcatcgggcg gcacaacccg
      661 aaatatccgc tcttcctcgg gatcgcggtg tgcgccctgt ccacctggat gatgtcgaac
      721 ttctccctgg cagcggattt caacgccctg gcctggcccc ggatctacct cgggatcggt
      781 atggggctcc tcttcatccc cctgacgacg ctcaccctct cctcgatccc gaagccccag
      841 atgggaaacg cgaccgccat ctacaacctg ctgcggaacc tcggcggatc gatcggcgtc
      901 tccttctcgg ccaccatgtt cgcccaccgc gcgcaggttc accagagccg catggtggaa
      961 cacctgacca ccctggacga gggattgcgc gccgccgtcg cgaagggaca ggcgctgctg
     1021 ccgtcccgcg gcgtgcccga ggcgatggcc gggaacacgg cgctggggag gatctacggg
     1081 gagctggtcc ggcaggcgac gatgatgggg ttcaacgacg ccttctatat cttgtcggtg
     1141 atgatggcgt gcgtcctgcc gctcctgctc ctgctccggc ggccgtcgca ccagacggaa
     1201 acggctgcgg gacattgaag ggcgcgggag ggacggaccg atgacgacca ccaccaggag
     1261 ccgggcgatc ctcgccaccg catcccgcct cttcgccgag aaggggtaca gccagaccac
     1321 gaccgcggag atcgcgcgcg aggcgggggt cgccgagggg acgctctacc accacttcgg
     1381 gagcaaggac gggatcttcc tccccctgtt cgacgagacg atggaggggt acctcgacgg
     1441 gatcgaggag attctcgcgc gggagacaac gggacgcgag accctctcgg ccttcgcccg
     1501 gttccatttc gactacgtct ccctgcgcaa ggagcagtac ctcatcctgc tgcgtgactt
     1561 cccggtccac ctgacggtcg aacatttcgc ccgactgtcc ccgcagcggg ggaaactcga
     1621 ccggatcacg gagctcttct cccggatcct cgcgcggggg aaggccgacg ggacgctcca
     1681 tctccccttc cccgtccgcg caacggcgga gatgctgcgc ggatcgttct atggcaccac
     1741 ccgcctcaag atgctcgacc tcatccaggc cccgttccca cagctcgccc ggatgatgga
     1801 atcgcactgg ctcaaggcgc tcgcaccgta gcgaacgcct cgcgcgatac cggcagcgcg
     1861 gtggactgcc ccttcgccag tacccggccg tcgccggcgg tcacggtgag ctcgcacacc
     1921 atcgactgcc ttcccttgtg aaggatgcgg gattcgccga acaccgtctc gccgggcttc
     1981 gcggcacgga agacgttgat gctccactgg accccgacgg catccacggc ggcgttcacg
     2041 gacagggcga acgccgcgtc cgccacggcg aagagcagca cgccgtgacc gatcgcgtgg
     2101 gcgttcagga accggtcctc gacgacggca gacaccttcg cgtacccttc ccgcccctcg
     2161 atcagcttca tcccgaactc ctggatgagc cggtctccgc ggaagatctc ctcgatgcgg
     2221 ttcatcact
//
LOCUS       DATGYW010000667         1897 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_50884, whole genome shotgun sequence.
ACCESSION   DATGYW010000667 DATGYW010000000
VERSION     DATGYW010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1897
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50884"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..365
                     /locus_tag="VK429_09330"
     CDS             <1..365
                     /locus_tag="VK429_09330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92043.1"
                     /translation="GQGRPNPDPGKETARHEATCTLPELFAAASRFLSAAGRFAFILP
                     YPRIEEIEPCAAKEGLRVEYLRVVHPRDGAPPFRGLCCAVRGGSGTPRLLPPLFLHGG
                     AEKYCPEVERICRLFRPG"
     gene            complement(370..816)
                     /locus_tag="VK429_09335"
     CDS             complement(370..816)
                     /locus_tag="VK429_09335"
                     /inference="COORDINATES: protein motif:HMM:NF017103.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HLN92044.1"
                     /translation="MKRKDAAPLSSILDAFLESLRIPHVAFLVSLRKRWPEISGPLVS
                     RNATPLSLRNGVLTVVVRNHAWAQELRMSKSTMIGRIRETLGERIPVSDIRFTVGSLT
                     SAGEAEGPPREEPPLPAGPDPEGLSAVADPETRKSLRAISRRSGGK"
     gene            complement(813..1052)
                     /locus_tag="VK429_09340"
     CDS             complement(813..1052)
                     /locus_tag="VK429_09340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013121558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92045.1"
                     /translation="MALIGGAALMVNIPLGYAREGFRRFSIGWFVCVHLSVPLIAYLR
                     LSNHVSAWGIPAFVACAVLGQIAGGKVRRLRRGRP"
     gene            1143..1415
                     /locus_tag="VK429_09345"
     CDS             1143..1415
                     /locus_tag="VK429_09345"
                     /inference="COORDINATES: protein motif:HMM:NF023251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3343 domain-containing protein"
                     /protein_id="HLN92046.1"
                     /translation="MELTRAPDPVLILIFRGTHQVLSAEKRLKRGGVPFRLIPVPRRL
                     TSDCGLAIRIPLDQRDRARGVLSVARLLPVSAHLPRAGGEFDPVSL"
BASE COUNT          294 a          636 c          636 g          331 t
ORIGIN      
        1 cgggacaagg gcgtccaaac ccggatccgg ggaaggagac ggcgcggcac gaggcgacgt
       61 gcacgctccc ggagctcttc gcggcggcgt cccggttcct ttccgcggcc ggccggttcg
      121 ccttcatcct gccgtatccg cgcatcgaag agatcgaacc gtgcgcagcg aaggaggggt
      181 tgcgcgtgga gtacctgcgg gtggtgcacc cccgggacgg cgcgccgccg tttcgggggc
      241 tctgctgtgc ggtccgcggc ggaagcggaa ctccccgtct cctgcctccc ctgttcctgc
      301 atgggggggc ggagaaatat tgcccggagg tggagcggat ctgccgcctc tttcgcccgg
      361 gatagagcct cactttcccc cggatcgtcg ggagatggca cgaaggcttt tgcgcgtctc
      421 cggatcggcc acggcagaca atccttccgg atcgggaccg gcgggtaacg ggggctcttc
      481 gcgcggcggg ccttccgcct ctccggccga agtcagggat cccacagtga accggatgtc
      541 gctcaccggg atcctttctc ccagcgtctc ccggatcctc ccgatcatcg tgctcttgct
      601 catccggagt tcctgcgccc acgcatggtt ccgcacgacg accgtgagga cgccgttccg
      661 aagcgacaga ggggtagcgt tccgcgagac cagggggccg gagatctccg gccatcgttt
      721 cctcagcgac acgaggaagg cgacatgcgg gatccgcagc gactcgagga acgcgtcgag
      781 gatcgacgag aggggcgccg cgtctttccg tttcacggcc gcccccgcct gagccgtcgg
      841 accttccccc cggcgatctg cccaagcacg gcgcacgcta cgaaggcagg gatcccccac
      901 gcgctcacgt ggttggacag ccggaggtac gcgatcagcg gaaccgagag gtggacgcag
      961 acgaaccacc cgatcgagaa tctccggaat ccctcccggg cgtacccgag ggggatattc
     1021 accatgagcg cggcgccccc gatgagggcc atcagggccc agggcgcctg aggtgcgatg
     1081 gcgggtacgg aaccggtcat ccgggcatta taatcggaac gtatggacgg aagtacgaag
     1141 gagtggaatt gacccgcgcg ccggatccgg tcctcatcct catcttccgg gggacccacc
     1201 aggtcctgtc ggccgagaag cggctgaagc ggggcggcgt gccgttccgc ctgatcccgg
     1261 tcccccgtcg cctcacgtcc gattgcgggc tcgcgatccg gatccccctc gatcagcggg
     1321 accgcgcccg gggggtcctg tcggtagcgc ggctgctccc cgtgtccgcc catctccccc
     1381 gcgcgggcgg ggagttcgac ccggtgtctc tctgaggatc gccggcaggg gtgatttttt
     1441 ctcctcgttc gaccgatagg atgggataga gtcgatagga tcgccatgcc ccacggggcc
     1501 ggcgggtgat ttccgcagag ggaggcaccg gagacagacc cttgacaatt agaaaatcat
     1561 caaataaaat aatagcttat attgttttcc gggaggtttc tttgaggggt gggtcgtgag
     1621 gaacggcctc gctacggcgg cattccttct gctgttcgcg tcgaccccgt ctatcggggg
     1681 ggccgcggaa cctctttcgc ctgcgccggc ggcgggagcg gcggtcactg ccgaaggcac
     1741 gaaggacggg atatcgccgg cctccgtgcc tgcctccacc gccgttcctc cggagacccc
     1801 cgcttcgggc gtgccggcgt cggttcccgt cgttcccgct cccggggttc ctccgcatca
     1861 agtcccgtcc gttcccacgc tgaatctttc cacaccg
//
LOCUS       DATGYW010000668         3557 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_97770, whole genome shotgun sequence.
ACCESSION   DATGYW010000668 DATGYW010000000
VERSION     DATGYW010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3557
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97770"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..569)
                     /locus_tag="VK429_09350"
     CDS             complement(<1..569)
                     /locus_tag="VK429_09350"
                     /inference="COORDINATES: protein motif:HMM:NF014619.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="laccase domain-containing protein"
                     /protein_id="HLN92047.1"
                     /translation="MKPLPYFVQSPLLRSVPGVYHAFLGVDPVEGRGRSERLREVFSL
                     AAETVGTLKQIHSAAVLSFESGDGDLPGGWKREGDALWTSLPGTGVGVHTADCVPILL
                     AHRKIPVAAAVHAGWRGLSAGIVEETVRVLAARFGDAAMGGIVAVAGPCARGCCYEVG
                     EETAEALHGLPGEAQYLRKGKAPGKWTADL"
     gene            complement(566..1528)
                     /locus_tag="VK429_09355"
     CDS             complement(566..1528)
                     /locus_tag="VK429_09355"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013479262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HLN92048.1"
                     /translation="MPNGPRGTHRLIVPADRAGERLDRYLPEAIPGISRARGQRLIEE
                     GNVRLAGEIVRPSTRLKGGEPMTVVVPPPVPLDMMAEDLPLRVLYEDAHLLVVEKPAG
                     MVVHPAPGHNRGTLVNALLGRSDTLSGIGGVSRPGIVHRLDRDTSGILVVAKTDAAHG
                     ALSARFAAHAMERKYHGVVFGGPPVDKGTVSTRIGRHPVHRKKMAVVPAGGRVAVTRY
                     RRLESFGTFSLLEFQLETGRTHQVRVHCAYLGCPIVGDDVYGRSRKIPLGKGASARTV
                     TVSRFLLHAFHLAFPHPVTGESLSFTIPDPPEFAAFRAAVEAAR"
     gene            complement(1533..1799)
                     /locus_tag="VK429_09360"
     CDS             complement(1533..1799)
                     /locus_tag="VK429_09360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010940758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92049.1"
                     /translation="MAVVKDMDVARRIARAVVSDIALYNAKKVEEGVRNDTLFDLLKG
                     EIEEGQGYYLSRVDPEIAKSTNYFDQALVDVLLKPAGRIPSKIW"
     gene            complement(1810..3213)
                     /locus_tag="VK429_09365"
     CDS             complement(1810..3213)
                     /locus_tag="VK429_09365"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HLN92050.1"
                     /translation="MKGRAVFTILLLLPAFTACTGGGPGSAPEPSSVASVQQALVSAV
                     ERSIPAVVNIRTVTRFTRGTPGSGRQMDGRPPEYLVDLLEENGGFRENSLGSGVIIGE
                     DGLIVTNEHVIRDADEIVVRLSNRSEYRAKVVGADVRTDVAVLRIQPSGKLPVATLGD
                     SSRLRVGEFAIAVGNPFGLESTVTLGVVSATGRSAEPDLEGGDDFIQTDASINPGNSG
                     GPLLNVRGEVVGINTAMVTAGQGIGFAIPINTVRSVEQDLVAHGTVRRGWLGLGIQAL
                     PPELADAFGAKGEKGILVNRVVPGSPAERGGVRMGDILVAFGKARVSGVKEFQGLVAG
                     TAPGSPVTLEVLREGKRVAATVTVEEAERQAEARRPPPREPVDPLGMAVRPVPPHLLR
                     EMELRGGVEVTFVETASPAWDGGVREGDVLLSINRETVRGLDEYRKAVSRLPRGRPAF
                     ALVYREGVQLYVALKSR"
     gene            complement(3210..>3557)
                     /locus_tag="VK429_09370"
     CDS             complement(3210..>3557)
                     /locus_tag="VK429_09370"
                     /inference="COORDINATES: protein motif:HMM:NF013821.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin kinase"
                     /protein_id="HLN92051.1"
                     /translation="EFVQDLLPLPGVYVVDAAVGGVVRRGVANVGFNPTFGENSLGVE
                     AHLLDFDGDLYGQDMTVRFRDRIRDERKFQSVEELVRQIEKDVGYARSVQLPTNPEAD
                     DAVFGGHPVDGPR"
BASE COUNT          565 a         1337 c         1112 g          543 t
ORIGIN      
        1 aggtcggccg tccacttccc gggcgccttc cccttcctca ggtactgcgc ctcccccggc
       61 aggccgtgga gcgcctccgc cgtttcctcg ccgacctcgt agcagcatcc gcgcgcgcag
      121 gggcccgcga cggcgacgat cccccccatg gcggcgtccc cgaatcgcgc cgcaagaacg
      181 cgaaccgttt cctcgacgat cccggcggag agcccccgcc atcccgcgtg gacggccgcg
      241 gcgacgggga tcttccggtg ggcgagaagg atcggcacgc aatccgccgt gtggaccccc
      301 acaccggtcc cggggagcga agtccagagc gcgtccccct cccgcttcca cccgccgggg
      361 agatctccgt ccccggattc gaaggaaagg acggccgccg agtggatctg tttcagcgtc
      421 ccgaccgttt ccgcggcaag ggagaagacc tcccgcagcc gttcgctgcg cccccgtccc
      481 tccaccggat ccacgccgag gaaggcgtgg tagacgcccg gcaccgaccg cagaaggggg
      541 gattgcacga agtacggaag gggtttcatc gggccgcctc gaccgcggcg cgaaaagcgg
      601 cgaactccgg cgggtcgggg atggtgaagg agagagactc ccccgtgacc ggatgcggga
      661 acgcaagatg gaacgcgtgg aggagaaagc gggagacggt caccgttcgc gcggacgccc
      721 ccttcccgag ggggatcttc cgcgatcttc cgtacacgtc gtctccgacg atcgggcagc
      781 cgaggtaagc gcagtgcacc cgcacctggt gggtgcgtcc cgtctccaac tggaactcga
      841 gaagggagaa ggtgccgaac gattcgagcc gccggtagcg ggtgacggcc acccgccccc
      901 ccgccggcac caccgccatc tttttccggt ggacggggtg cctcccgatc cgcgtggaca
      961 cggtcccctt gtccaccggc gggccgccga agacgacccc atggtacttc cgttccatcg
     1021 cgtgggctgc gaacctggcg gacagcgccc cgtgggcggc gtcggtcttc gcaaccacga
     1081 gaatcccgga ggtgtcacga tcgagccggt ggacgattcc cggtcgggag acgcccccga
     1141 ttccggacag ggtgtcggag cgcccaagga gcgcgttcac gagggttccg cggttgtgcc
     1201 ccggcgcggg gtgaaccacc atgccggcgg gtttttcgac gaccaacagg tgggcgtctt
     1261 cgtacagcac acggagggga agatcctccg ccatcatgtc gaggggaacg ggcggaggaa
     1321 cgacgacggt catcggttcc ccccccttca ggcgggtcga cggacgcacg atctctcccg
     1381 ccagccggac gttcccctcc tcgatcaacc gctgcccgcg cgccctggag atccccggga
     1441 tcgcctccgg aaggtaccgg tcaaggcgtt cccccgcccg atcggccggc acgatcagcc
     1501 ggtgggtccc gcgcggcccg ttcggcatca cgctaccaga tcttcgaggg gatccgcccg
     1561 gccggcttga gaaggacatc caccagcgcc tggtcgaaat aattcgtgct cttcgcgatt
     1621 tcggggtcga cacggctcag gtagtagccc tgcccctcct cgatctcccc cttcaacaga
     1681 tcgaacaggg tgtcgttccg gaccccctcc tcgaccttct tcgcgttgta cagcgcgatg
     1741 tccgagacca ccgcccgggc gatccgccgg gccacgtcca tgtccttcac caccgccatc
     1801 ggctcctcct tacctgcttt tcagcgccac gtaaagttgg acaccttccc tgtagacaag
     1861 ggcaaacgcc ggccgcccgc gaggaagtcg cgacacggcc ttccggtact cgtcgaggcc
     1921 gcgaaccgtt tcacggttga tggagagaag aacgtcccct tcccggacgc cgccgtccca
     1981 cgccgggctg gcggtctcga cgaacgtcac ttcgacgcct ccgcgaagct ccatctcccg
     2041 cagcagatgc ggcggaacag gccgcacggc catcccgagc gggtccaccg gttcccgggg
     2101 aggcggacgc ctcgcttccg cctgcctctc cgcctcttcg accgtcaccg tcgccgccac
     2161 ccgtttcccc tcgcggagca cctcgagcgt caccggggaa ccgggcgccg tcccggcgac
     2221 aagcccctgg aactccttga ccccggatac gcgggccttc ccgaacgcga ccaggatatc
     2281 tcccatccga acccccccgc gctctgcggg actgcccgga acgacccggt tcacaaggat
     2341 ccccttttcg cccttcgccc cgaacgcgtc cgcgagctcc ggggggaggg cctgaatccc
     2401 caggccgagc cacccccgcc gaaccgtccc gtgcgcgacc aggtcctgct ccaccgaccg
     2461 gaccgtgttg atcgggatgg cgaagccgat cccctgcccc gcggtcacca tcgccgtgtt
     2521 gatcccgacc acttcccccc gcacgttaag gagggggccc cccgagtttc ccgggttgat
     2581 cgacgcgtcg gtctggatga aatcgtcccc gccctcgagg tccggttccg cgctgcgccc
     2641 ggtcgcgctc accacgccga gggtcacggt gctctcgagg ccgaacgggt tccccaccgc
     2701 gatggcgaac tccccgaccc tcaggcggga ggagtcgccc agcgtcgcca ccgggagctt
     2761 cccggacggc tggatccgca gcacggcgac gtccgtccgg acgtccgcgc cgaccacctt
     2821 cgcccggtac tcgctccgat tcgaaagccg cactacgatc tcgtccgcgt cgcggatgac
     2881 gtgctcgttg gtgacgatca gcccgtcctc accgatgatg acccccgacc cgagggagtt
     2941 ctcgcggaat ccgccgttct cctcgagcag gtccacgaga tactccggcg gtcggccgtc
     3001 catctgccgc cccgatcccg gcgttccgcg agtgaagcgg gtgaccgtgc ggatgttgac
     3061 caccgccggg atggagcgct ccacggcgga aacgagcgcc tgctggaccg acgcgacgct
     3121 ggacggctcc ggcgcgctcc ccggcccccc gccggtgcac gccgtgaagg caggaaggag
     3181 gagaaggata gtgaaaaccg ccctcccttt catcgggggc cgtccaccgg gtgtccgccg
     3241 aagaccgcgt cgtccgcctc cggattcgtc ggcaactgca cggatcgcgc atacccgacg
     3301 tctttctcga tctggcgcac cagttcctcc acgctctgga acttccgctc gtcccgtatg
     3361 cggtcccgga agcgtaccgt catatcctgc ccgtagagat cgccatcgaa gtcgaggagg
     3421 tgcgcctcca ccccgaggga gttctccccg aatgtcgggt tgaacccgac gttggccaca
     3481 cctctccgca cgacaccccc tacggcggcg tcgacgacgt acactcccgg cagcgggaga
     3541 agatcctgca cgaactc
//
LOCUS       DATGYW010000669         2319 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_264031, whole genome shotgun sequence.
ACCESSION   DATGYW010000669 DATGYW010000000
VERSION     DATGYW010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264031"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..82)
                     /locus_tag="VK429_09375"
     CDS             complement(<1..82)
                     /locus_tag="VK429_09375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004870775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HLN92052.1"
                     /translation="MARIAGVDIPKTKKIGTALTYIYGIGP"
     gene            complement(129..242)
                     /gene="rpmJ"
                     /locus_tag="VK429_09380"
     CDS             complement(129..242)
                     /gene="rpmJ"
                     /locus_tag="VK429_09380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015851088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HLN92053.1"
                     /translation="MKVRPSVRKFCVKCKVIRRKGVVRVICENPKHKQRQG"
     gene            complement(256..474)
                     /gene="infA"
                     /locus_tag="VK429_09385"
     CDS             complement(256..474)
                     /gene="infA"
                     /locus_tag="VK429_09385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012611021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HLN92054.1"
                     /translation="MAKEEAIEIEGTVIEPLPNAMFRVELDNKMKVLAHISGKMRMHF
                     IKILPGDRVTVQLTPYDLTRGRITYRSK"
     gene            complement(512..1261)
                     /gene="map"
                     /locus_tag="VK429_09390"
     CDS             complement(512..1261)
                     /gene="map"
                     /locus_tag="VK429_09390"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013259707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HLN92055.1"
                     /translation="MILVKSPREIEVMRRAGAVVGRFFEEVKPLILPGVSTWDLELFA
                     DRFIARNGVRSAFKGYMGYTAHLCTSINEEVVHGIPSKDRIVREGDILSIDFGIVRDG
                     YYGDSAMTFPVGTVDGVSSRLLAATERSLTAGIGEVRPGNRLGDVSAAVQETVESEGF
                     SVVRDFVGHGIGRSLHEEPQIPNFGKRGVGPKLMPGMALAIEPMVNAGGWPVEVLTDG
                     WTVITRDRSRSAHFEHTVAVTEDGYRILSLP"
     gene            complement(1265..1906)
                     /locus_tag="VK429_09395"
     CDS             complement(1265..1906)
                     /locus_tag="VK429_09395"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012529387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HLN92056.1"
                     /translation="MGIILLGPPGAGKGTQAKKLTQAFSIPQISTGDMLRAAVKNGTA
                     LGRKAKTFMDAGGLVPDEVVIGIVKERLAEPDCGKGFILDGFPRTIPQAEALDRVTKE
                     LGKEIRFVLSLEVDQNDLMERLCGRRTCTGCGAMYHVKFNPPRSAGTCDKCGTALIQR
                     DDDKEETITNRLANYNKATAPLLDYYRNTGKIRSVMASGEIDAIYAEIVKILR"
     gene            complement(1914..>2319)
                     /locus_tag="VK429_09400"
     CDS             complement(1914..>2319)
                     /locus_tag="VK429_09400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015905421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HLN92057.1"
                     /translation="LTPGGIGYELLFVAFIIFFCYFYTAVTFNPVDVADNMKKYGGFV
                     PGIRPGKKTAEYIDKILTRITLGGAIYVSVICVLPSILIARFNVPFYFGGTGLLIVVG
                     VAMDTVQQIESHLITRHYEGFLKKGQMKGRRG"
BASE COUNT          416 a          775 c          617 g          511 t
ORIGIN      
        1 tcggcccgat cccgtagatg tacgtaaggg ccgtcccgat cttcttcgtc ttaggaatgt
       61 ccactcccgc tatgcgtgcc aaccgactcc tccttggaac gatcttttgc ggcgtctatc
      121 ctgtgcgtct acccttggcg ctgtttgtgc ttcgggttct cgcagatcac ccgcacaacg
      181 ccttttcgac gaatgacctt gcacttgacg cagaactttc gcaccgacgg tctgactttc
      241 atcttcgtcc cctcttcact tggatcggta ggtgatccgg ccccgcgtca ggtcgtacgg
      301 cgtcaactga acggttaccc gatcccccgg caggatcttt atgaaatgca tccgcatctt
      361 gccggagatg tgcgcgagca ccttcatctt gttgtcgagc tccacccgga acatggcatt
      421 cggcaacggc tcgatcactg tgccctcgat ttctatcgcc tcttcttttg ccatattcct
      481 ctttacatcc gcatgtatct tacttaaatt ctcaaggaag acttaatatt cgatatccgt
      541 cctcggtaac cgccaccgtg tgctcgaagt gtgccgatcg gctccggtcg cgcgtgatga
      601 cggtccaccc gtccgtcagg acctcgacgg gccacccccc cgcgttcacc atcggttcga
      661 tggccaaggc cattcccggc atcaatttcg ggccgacccc ccgcttgccg aaattcggga
      721 tctgcggctc ctcgtggagc gacctgccga ttccgtgccc tacgaagtcg cggaccaccg
      781 agaatccttc ggactcgacc gtctcctgca cggccgccga aacatcgccc aaccggtttc
      841 cgggtcgaac ctccccgatc cccgccgtga gcgaacgttc cgtcgcggcg agaagcctgg
      901 aggaaactcc gtccaccgtc ccgacgggga aggtcatcgc cgaatccccg tagtagccgt
      961 cacgaacgat cccgaaatcg atgctcagga tgtctccctc ccgtacgatc ctgtctttcg
     1021 atgggatccc gtgcaccacc tcctcgttga tggaggtgca aagatgcgcc gtgtatccca
     1081 tgtatccctt gaaggcgctt ctgacgccgt tccgggcgat gaaccggtcg gcgaacagct
     1141 caaggtccca cgtgctgacc ccggggagaa tcaacggctt cacttcctca aagaacctgc
     1201 ctacgacggc gcccgcgcgc cgcatcacct cgatctcgcg aggcgacttt accagaatca
     1261 tcccctatcg gagaatcttg acgatctcgg cgtagatggc gtcgatctcg ccggatgcca
     1321 tcacggaccg gatcttcccc gtgttcctgt aataatcgag cagcggagcg gtcgccttgt
     1381 tatagttggc caaacggttc gtgatcgtct cttccttgtc atcgtccctt tggatcaggg
     1441 ccgtcccgca tttgtcgcac gtacccgcgg acctcggggg attgaacttc acgtgataca
     1501 tcgccccgca accggtacag gtccggcgcc cgcacaaccg ctccatcagg tcgttctgat
     1561 cgacttcgag ggagaggacg aagcggatct ccttccccag ttccttcgtc acgcggtcga
     1621 gcgcctcggc ctgcgggatc gtacgcggaa agccgtcgag aatgaacccc ttcccgcaat
     1681 cgggctccgc gagacgctcc ttgacgatac cgatgaccac ctcgtcgggc accagtccgc
     1741 ccgcgtccat gaacgtcttt gccttcctgc cgagcgctgt cccgttcttg accgccgccc
     1801 ggagcatgtc cccggtcgag atctgcggta tggagaacgc ctgggtcaac ttcttggcct
     1861 gggtgccctt ccccgcgccg ggggggccca gaaggatgat tcccatcatc ggcttatccc
     1921 ctcctcccct tcatctggcc ttttttgagg aatccctcgt aatgccgcgt gatcagatgc
     1981 gactcgatct gctggaccgt gtccatggcg acacccacca cgatcaaaag ccccgtcccg
     2041 ccgaaataga atgggacgtt gaaccgggcg atgaggatgc tgggcaggac gcagatgacg
     2101 gatacgtaga tcgcgccgcc gagcgtgatc cgcgtcagga tcttgtcgat gtactccgcc
     2161 gtcttctttc cgggacggat cccggggacg aagcctccgt acttcttcat gttgtccgcg
     2221 acgtcgaccg gattgaacgt caccgccgtg tagaagtagc agaagaagat gatgaaggcg
     2281 acgaatagca gttcgtagcc gatccctccc ggcgtcagg
//
LOCUS       DATGYW010000670         2449 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_155709, whole genome shotgun sequence.
ACCESSION   DATGYW010000670 DATGYW010000000
VERSION     DATGYW010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155709"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..269)
                     /locus_tag="VK429_09405"
     CDS             complement(<1..269)
                     /locus_tag="VK429_09405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020014276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HLN92058.1"
                     /translation="MLIDVVMPQLGESVVEGVVVKWLVEVGELVAKDHPLLEISTDKV
                     DAEIPSPSAGRVAQILVKPGETVPIQAVLAKLETDQAASLPAGEAA"
     gene            complement(289..1263)
                     /locus_tag="VK429_09410"
     CDS             complement(289..1263)
                     /locus_tag="VK429_09410"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015743325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HLN92059.1"
                     /translation="MLVTYIEAIRQAMDEELARDRNVLLMGEDVGVLGGAFKATAGLQ
                     EKHGADRVVDMPISESLIVGAGVGLAVQGMRPVLEMQFIDFISCGFDQIVNSAATLRY
                     RHGGQTACPIVVRGPSGGGVHGGLYHSQNPEAWFCHVPGLKVVAPATAYDAKGLLKSA
                     IRDDDPVIYFEHKFLYRRIKEEIPAEEYLVPIGKAALRKEGRDLTVITYGAPVHAVMK
                     AARDMAAEVDIEVIDLRTLLPIDWATVKGSVRKTGKVLIVHEARLTGGIGGEVAARIG
                     QDCFEELDGPVMRLAARDVHTPFAPAMEDYVLPNQEKITEAIRKLAAY"
     gene            complement(1266..2243)
                     /locus_tag="VK429_09415"
     CDS             complement(1266..2243)
                     /locus_tag="VK429_09415"
                     /inference="COORDINATES: protein motif:HMM:NF012880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HLN92060.1"
                     /translation="MTEQKDRELYRWLRLIREFEDRISAMDKQGKLMGGVYSGKGQEA
                     VTVGFCHDLRWDDWIFPLHRDLGAFLVKGADPKRLMAQIFGRRDGFAKGKDSYLHGGD
                     LENGIFGATSMLAATLPVAAGMAYKFKIRKEDRVAIAFFGEGASSRGDVHEAMNFAGV
                     HRLPVVFVCENNFYAYSTPNELQFGVDNVADRAAGYGFKGEVVSGNDLHAVMKTAGKA
                     IDRARKGEGPTLVECKTYRYHGHSEHDRADYRSEEEVITWESRDPIFLWENYLEKRKY
                     DIAAIRKETTGEVTRIVEEAVAFAEASPAPEGTEAMEDLYAMPIDTEAR"
     gene            complement(2263..2406)
                     /locus_tag="VK429_09420"
                     /pseudo
     CDS             complement(2263..2406)
                     /locus_tag="VK429_09420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014560515.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
BASE COUNT          351 a          897 c          749 g          452 t
ORIGIN      
        1 gccgcctcgc ccgcgggtag ggaggccgcc tggtcggttt cgagtttcgc cagcaccgcc
       61 tggatgggga ccgtttctcc cggcttgacc aggatctgcg cgacccggcc cgccgacggc
      121 gaggggatct ccgcgtccac cttgtccgtg gagatctcga gcagggggtg gtccttggcg
      181 accagctccc cgacctccac gagccacttc accacgaccc cttccaccac gctttccccg
      241 agctggggca tcacgacgtc gatgagcatc gcttcacgct ccttgcgttt aatacgcggc
      301 gagtttccgg atcgcctcgg tgatcttctc ctggttcggc aggacgtagt cctccatcgc
      361 cggggcgaac ggggtgtgga cgtcccgcgc cgccagccgc atgaccggcc cgtccagctc
      421 ctcgaagcaa tcctgcccga tccgtgcggc gacctccccc ccgatccccc cggtcaggcg
      481 cgcctcgtgg acgatcagca ccttccccgt cttccgcacg gatcccttca ccgtcgccca
      541 gtcgatcggc aggagggtcc gcaggtcgat cacctcgatg tcgacctccg cggccatgtc
      601 ccgcgccgcc ttcatcaccg cgtggaccgg ggcgccgtag gtgatgacgg tgaggtcccg
      661 cccctccttg cgcagcgccg ccttcccgat ggggaccagg tactcctccg cggggatctc
      721 ttccttgatc ctccgataga ggaacttgtg ctcgaagtag atcaccgggt cgtcgtcccg
      781 gatggcggac ttgagcagcc ccttcgcgtc gtacgccgtc gcgggggcca ccaccttgag
      841 gccggggacg tggcagaacc acgcctccgg gttctgggag tggtacaggc cgccgtggac
      901 cccgccgccc gacggccccc ggacaacgat cgggcaggcg gtttgcccgc cgtggcggta
      961 gcgaagcgtc gcggccgagt tcacgatctg gtcgaaaccg caggagatga agtcgatgaa
     1021 ctgcatctcg aggaccgggc gcatcccctg gaccgccagt cccacccccg ccccgacgat
     1081 cagcgactcg gagatgggca tgtcgaccac ccggtcggcg ccgtgcttct cctggagccc
     1141 cgccgtcgcc ttgaaggcgc cgcccagcac accgacatcc tcccccatca acaggacatt
     1201 cctgtccctt gccagctcct cgtccatggc ctgccggatc gcctcgatgt aggtgacgag
     1261 catggtcagc gggcctccgt gtcgatcggc atggcgtaca ggtcttccat cgcctcggtc
     1321 ccctccggag ccgggctggc ctcggcgaac gcgaccgcct cttccacgat ccgtgtcacc
     1381 tccccggtcg tctccttccg gatggcggcg atgtcgtact tccgcttttc aaggtagttc
     1441 tcccacagga agatcgggtc ccggctctcc cacgtgatga cctcctcctc cgaacggtag
     1501 tcggcacggt cgtgctcgga gtggccgtgg taccggtacg tcttgcactc gaccagcgtg
     1561 gggccttccc ccttgcgcgc ccggtcgatc gccttcccgg ccgtcttcat caccgcgtgg
     1621 aggtcgttcc cgctcaccac ctcgcccttg aacccgtatc cggccgcccg gtccgccacg
     1681 ttgtccaccc cgaactgcaa ctcgttgggg gtggagtagg cgtagaaatt gttctcgcag
     1741 acgaagacca cggggagcct gtgcacgccg gcgaagttca tcgcctcgtg gacgtccccc
     1801 cggctgctcg ccccctcgcc gaagaaggcg atcgcaacgc ggtcctcctt gcggatcttg
     1861 aacttgtacg ccatccccgc cgcgaccggc aaggtggccg ccagcatgga agtggccccg
     1921 aagatcccgt tctcgaggtc cccgccgtgc aggtaggagt cttttccctt cgcgaagcca
     1981 tccctcctgc cgaagatctg ggccatcaga cgcttcgggt cggccccctt gacgagaaag
     2041 gcgcccaggt cccggtggag cgggaagatc cagtcgtccc accgcaggtc gtggcagaat
     2101 cccaccgtca ccgcctcctg ccccttcccc gagtagaccc cgcccatgag cttcccctgc
     2161 ttgtccatcg cggagatccg gtcctcgaac tcgcggatga ggcgaagcca gcggtacagc
     2221 tcccggtcct tctgctcggt catggcgtcc tctcgtcgga tgttataggt cgatcgcctc
     2281 gccgcccagc atgagcgccg cctcccggat cgcttccgga agggtggggt gcgcgtggac
     2341 cgtgcggccg atctcgtgga acgtcgcctc gagggaacgg gcgagggaga gctccgcgat
     2401 catgtccggc tggatttttc agcctgcgtt tgggatgagg tgcggatat
//
LOCUS       DATGYW010000671         1831 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_264285, whole genome shotgun sequence.
ACCESSION   DATGYW010000671 DATGYW010000000
VERSION     DATGYW010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264285"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..579)
                     /locus_tag="VK429_09425"
     CDS             complement(46..579)
                     /locus_tag="VK429_09425"
                     /inference="COORDINATES: protein motif:HMM:TIGR00573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HLN92061.1"
                     /translation="MRNPIHGGRITEIPFVAADVETTGLSATDGHRVCEVALLRFLRG
                     TVTDSFVSLVNPLRPIDPGASAVNGITDAMVAGAPTFADLLPQIVDFLSDDPLVFHNA
                     PFDLSFLRSEARLAGGAWPRNRVIDTLLLARRTGRFRSNSLPNICRELGIGSTFHRAE
                     ADAWAAGKLLLHLHGER"
     gene            632..736
                     /locus_tag="VK429_09430"
                     /pseudo
     CDS             632..736
                     /locus_tag="VK429_09430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007294422.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin-type Fe(Cys)4 protein"
     gene            739..858
                     /locus_tag="VK429_09435"
                     /pseudo
     CDS             739..858
                     /locus_tag="VK429_09435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020463851.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
     gene            975..1136
                     /locus_tag="VK429_09440"
     CDS             975..1136
                     /locus_tag="VK429_09440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015869456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HLN92062.1"
                     /translation="MKKWRCVVCSYVYDPAVGDPDNGVPPGTAFENIQDDWVCPLCGA
                     GKDEFEPAD"
     gene            1165..>1831
                     /locus_tag="VK429_09445"
     CDS             1165..>1831
                     /locus_tag="VK429_09445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005037208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FprA family A-type flavoprotein"
                     /protein_id="HLN92063.1"
                     /translation="MPIVTLAPDVYCVGVKDPGLTIFDIVIPTEHGTTYNSYLVKGTE
                     KTALIDCVKRPFAAELLRNIEEILPVSKLDYVIVNHSEPDHAGALVELLERNPTVTVL
                     LSRSAKTFVDNLVNAGFPFRIVGDDDELQLGGKTLRFINAPFLHWPDTILTYLAEEEI
                     LFPCDFLGAHYSSPHTFNDELHEPEKARKAFEFYYATIMRPYKEHILKACGRLKDLPL
                     KMIA"
BASE COUNT          339 a          610 c          598 g          284 t
ORIGIN      
        1 aatacgccgg gagggacgcc gccgtatatc ccggttcgaa aaaactcacc tttctccgtg
       61 caggtggagc agcagtttcc ccgcggccca ggcgtcggct tccgcccggt ggaatgtgga
      121 gccgatgccg agctcccggc agatgttcgg gagggagttg gagcggaagc gcccggtccg
      181 gcgggcaagc agaagcgtat cgatcacccg gttccgcggc cacgcacctc ccgcgagccg
      241 cgcctcgctc cgaaggaacg acaggtcgaa cggcgcgttg tggaagacga gcgggtcgtc
      301 cgaaaggaag tcgacgatct gcggaaggag gtccgcgaag gtgggggcgc cggccaccat
      361 cgcgtcggtg atcccgttca ccgccgacgc gccggggtcg atcgggcgca ggggattcac
      421 cagcgagacg aaggagtcgg tcaccgtccc gcgcaggaag cggagcaggg cgacctcgca
      481 gacccggtgg ccgtcggtcg cggaaagccc ggtggtctcg acgtccgccg cgacgaacgg
      541 gatctcggtg atgcggccgc cgtggatcgg gttcctcaat gttcccccct ggtgtaaaat
      601 acgggcacca tcatcccaca ggagcccacc gatgaaaaag tggaagtgca ccgtctgcgg
      661 ctacatccat cagggggacg agccccctgc cacctgcccc atctgcgggg cgttccgcga
      721 gaagttcgtc cagatttgat gccgggcggc ccggggaagg ttgcgctggt caccggcggg
      781 agccggcgga tcggggcgac gatctcccgc gccctcgcga aggcgggata ctccgtcgtc
      841 ctgacgtacc ggtcctcctc cgtggcgggc cggcgcggga tccggacgcc ggaaggggtc
      901 gcgagagccg tcttgcggtt cgcacgcccg gggacctata atccctgaac cgatcatcgc
      961 ccagggggtg tcgaatgaaa aagtggagat gcgtcgtctg cagctacgtc tacgaccccg
     1021 ccgtcggcga cccggacaac ggcgtgccgc ccggtaccgc cttcgagaac atccaggacg
     1081 actgggtatg ccccctctgc ggcgccggga aggacgagtt cgagccggcc gactgacggg
     1141 aatccgcact tcgaggagcc gagcatgccc atcgtgacgc ttgcgccaga cgtctactgc
     1201 gtcggggtca aggacccggg acttaccatc ttcgacatcg tcattccgac cgagcacggg
     1261 acgacgtaca actcctacct cgtgaagggg acggagaaga cggccctcat cgactgcgtg
     1321 aagcgcccct tcgccgccga gctcctgcgc aacatcgagg aaatcctccc cgtgtcgaag
     1381 ctcgactacg tgatcgtcaa ccattccgag ccggaccacg ccggcgcgct ggtcgagctg
     1441 ctcgagcgga atcccacggt cacggtgctc ctctcccgtt ccgcgaagac gttcgtggac
     1501 aacctcgtga acgccgggtt ccccttccgc atcgtcggcg acgacgacga actgcaactc
     1561 ggggggaaga cgctccggtt catcaacgcg ccgttcctgc actggcccga cacgatcctc
     1621 acgtatctgg cggaggagga gatcctcttt ccctgcgatt tcctcggggc ccattactcc
     1681 agcccccaca ccttcaacga cgagctccac gagcccgaga aagccagaaa ggcgttcgag
     1741 ttctactacg cgacgatcat gcggccgtac aaggagcaca tcctcaaggc gtgcgggcga
     1801 ctcaaggacc tgccgctgaa gatgatcgct c
//
LOCUS       DATGYW010000672         2908 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_207037, whole genome shotgun sequence.
ACCESSION   DATGYW010000672 DATGYW010000000
VERSION     DATGYW010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207037"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(58..133)
                     /locus_tag="VK429_09450"
     tRNA            complement(58..133)
                     /locus_tag="VK429_09450"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(98..100),aa:Lys,seq:ttt)
     gene            complement(174..1469)
                     /locus_tag="VK429_09455"
     CDS             complement(174..1469)
                     /locus_tag="VK429_09455"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012645937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HLN92064.1"
                     /translation="MKSVIVLGAQWGDEGKGKIVDIYSEFADTIVRPTGGNNAGHTLV
                     VKGEKFVFHLIPSGILHPGKKCVIANGVVIDPKVLLMEIDRLKERGYLKDDAQLKIGL
                     LANIILPYHIRLDKAREEKLGSRKIGTTARGIGPCYEDKIARVGIRACDLLRPESFTE
                     MLRANLDVKNFLLKNYFDGEEVPFQATLDEYLAYGERLKTHLIDTSLFVNEEIARGAK
                     LLFEGAQGTLLDIDHGTYPFVTSSNTTAGGACTGSGVGPTRIGSVVGVSKAYATRVGG
                     GPFPTELFDEEGQKIRDRGNEYGSTTGRPRRCGWFDAPVIRYANRLNGLAGLALTKLD
                     VLSGLATVKMCVAYEIDGGRREQVPLSLTEFEAAKPVYEQVEGWKEDISSAREFGDLP
                     KAARKYVHMIEEVTGVEVSLVSVGPDRNQTIIRRNPFRA"
     gene            complement(1489..>2908)
                     /gene="serA"
                     /locus_tag="VK429_09460"
     CDS             complement(1489..>2908)
                     /gene="serA"
                     /locus_tag="VK429_09460"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: protein motif:HMM:TIGR01327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HLN92065.1"
                     /translation="ATAACFENASRIKVIGRAGSGTDNIDKVAATKKGVVVMNTPGGN
                     TVTTAEHAVSMMMALSRQIPQATASMKAGKWEKNKFMGTEITDKVLGVVGLGAIGKVV
                     ADRALGLKMVVVAFDPYVSKEDAALLGVEMASLDELYARADYITYHTPLTPDTKGMVN
                     SAAIAKMKDGVRIINCARGALVNEAELLAALESGKVAGAALDVFATEPPPPETALLAH
                     PNVILTPHLGAATTEAQEKVAVLIAEQICDFLKKGTIRNSVNFPSVSGELLPILRPFL
                     TLAERLGAFHGQLLRNPVRELKVDYLGEVGKLSTPPVTISVLKGLLQYQTEEVNLVNA
                     RMVAEERGIKVSESKTPKSEPYASLIKVTVVTGNGESSVAGTVFGEAPRIVQIDAFPI
                     VAELSGGILMLRNQDVPGVIGRIGTFLGEKGINIAGLRLGRTEVGGTAVSLINVDNAV
                     PENVLAQLRKLPNIMDAQYLVF"
BASE COUNT          478 a          951 c          904 g          575 t
ORIGIN      
        1 tcgccgccgt gaaagggcgg tgtccttggc cgaactagac gatggggacg cgcacggtgg
       61 tgagcccagt tgggatcgaa ccaacgaccc tctgattaaa agtcagatgc tctgccaact
      121 gagctatggg ctcccccgga actgggtatt ctatgttcct ggagccggga gtgtcaagcg
      181 cggaagggat tcctccggat gatcgtctgg ttccggtcgg gccccacgga gacgagggaa
      241 acctcgacgc cggtgacctc ttcgatcata tggacgtact tccgggcggc tttcggcagg
      301 tccccgaact cccgggccga agagatgtcc tccttccagc cctccacctg ttcgtagacc
      361 ggcttggccg cctcgaattc ggtaagggac agaggaacct gctcccgccg gccgccgtcg
      421 atctcgtacg caacgcacat cttcacggtc gccagtccgg agaggacgtc cagtttggtc
      481 agcgcgaggc cggccagccc gttgaggcgg tttgcgtacc gaatgaccgg ggcatcgaac
      541 cagccgcacc gccgcggccg ccccgtcgtc gatccgtact cgttcccgcg gtcccttatc
      601 ttctggccct cctcgtcgaa gagttccgtg gggaacggcc cgccacctac gcgcgtcgcg
      661 tacgccttcg ataccccgac gacgctgccg atcctcgtcg ggccgacgcc ggatcccgtg
      721 cacgcgcccc ccgccgtcgt gttcgaggag gttacaaacg ggtaggtccc gtgatcgatg
      781 tcgagcagcg tcccctgggc cccttcgaac agcagcttgg ccccacgcgc gatctcctcg
      841 ttgacgaaga gcgaggtgtc gatgaggtgg gtcttcaggc gttccccgta cgcgagatat
      901 tcgtccagcg tcgcctgaaa ggggacctcc tcgccgtcga aatagttctt caagaggaaa
      961 ttcttcacgt cgaggttcgc gcgaagcatc tcggtgaacg attccggcct gaggaggtcg
     1021 cacgcccgga tgccgacgcg cgcgatcttg tcttcgtagc acggcccgat cccccgcgcc
     1081 gtggtgccga tcttcctgct gccaagcttc tcttcccggg ccttgtcgag ccggatgtgg
     1141 tacgggagga tgatgttcgc cagcagcccg atcttcagct gcgcgtcgtc cttcaggtag
     1201 ccacgctcct tcaggcggtc gatctccatg aggagtacct tcggatcgat caccaccccg
     1261 tttgcgatga cgcacttctt ccccgggtga aggatgccgg aggggatgag gtgaaagacg
     1321 aacttttcgc ccttcaccac gagggtgtgc ccggcgttgt ttccgcccgt cggacgcacg
     1381 atcgtgtcgg cgaactcgga atagatgtcg acgatctttc ccttgccctc atcgccccac
     1441 tgggcgccga gcacgatgac acttttcaaa ggagtccgcc ttctttcgtc agaataccag
     1501 gtattgggca tccatgatgt tcggaagctt tcgaagctgc gcaaggacgt tctcgggaac
     1561 ggcgttgtcc acgttgatga gcgaaacggc ggttccgccg acctcggtcc tgcccagccg
     1621 caatccggcg atgttgatcc ccttctcgcc gaggaaggtg ccgatccggc cgattacccc
     1681 cggaacgtcc tgatttcgca gcatcaggat gcctccggaa agctccgcca cgatggggaa
     1741 ggcgtcgatc tggacgatcc tcggcgcctc gccgaacacg gtaccggcca cggacgactc
     1801 cccgttcccg gtcaccacgg taaccttgat gagactcgcg tacggctccg acttgggggt
     1861 cttcgactcg ctcaccttga tgccgcgctc ctcggcgacc atccgggcgt tgacgagatt
     1921 cacttcctcg gtctggtact gcaggagccc cttcagcacc gagatcgtta ccgggggcgt
     1981 ggagagtttc ccaacctcgc cgaggtagtc caccttgagc tcccggaccg ggttccggag
     2041 cagctgcccg tggaacgcgc cgagccgttc ggcgagggtg aggaacggcc tcaggatcgg
     2101 cagaagctcg ccggagaccg acgggaagtt caccgagttg cggatcgtcc cctttttcag
     2161 gaaatcgcag atctgctccg cgatcagcac cgccaccttt tcctgggcct ccgtcgtcgc
     2221 ggcgcccagg tgcggcgtga ggataacgtt gggatgcgcc aggagcgccg tttcgggagg
     2281 agggggctcc gtagcgaaga catcgagcgc cgcaccggca acctttccgg actcgagagc
     2341 ggccagcagt tcggcctcgt tcacgagggc gccgcgggcg cagttgatga tccgcacgcc
     2401 gtctttcatc ttcgcgatcg ctgcggagtt caccatcccc ttcgtgtccg gggtgagcgg
     2461 cgtgtggtag gtgatgtagt cggcgcgcgc gtacaattcg tcgagggatg ccatctccac
     2521 gccaagcagc gccgcgtcct ccttcgatac gtacggatcg aatgcgacca cgaccatctt
     2581 gaggcccagg gcccggtccg caacgacttt cccgatggcc ccgaggccga cgacgccgag
     2641 gaccttgtcg gtgatctcgg tacccatgaa cttgttcttt tcccatttcc ccgccttcat
     2701 cgaggcggtc gcctgaggga tctggcggga aagggccatc atcatcgaga cggcgtgctc
     2761 ggcggtcgtc acggtgttgc cgccgggggt attcatcacg accacgccct tcttggtggc
     2821 ggcgaccttg tcgatgttgt cggtgccgct gccggcgcgc ccgatcacct tgatgcgcga
     2881 ggcgttctca aagcacgcgg ccgtggcc
//
LOCUS       DATGYW010000673         1719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_364283, whole genome shotgun sequence.
ACCESSION   DATGYW010000673 DATGYW010000000
VERSION     DATGYW010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364283"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1053)
                     /locus_tag="VK429_09465"
     CDS             complement(<1..1053)
                     /locus_tag="VK429_09465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004513723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HLN92066.1"
                     /translation="MANGTDDRPHNGNGSDYTGENIQVLKGLEAVRKRPAMYIGSTDT
                     HGLHHLVYEVVDNAIDEAMAGYCDTIAVVIHADNSVTVEDNGRGIPVDIMPEEGKPAA
                     EVVLTILHAGGKFDRDTYKVSGGLHGVGVSVVNALSEKLTAEIRRDGSVHQIDFTRGE
                     TSSPLKVTGKSRKNGTKITFKPDTEIFTETEFSFDVLSQRLRELSFLNAGLKISILDE
                     RNDKSHDFQYKGGIVSFVQHLNRNKTPLHAKPVLVEGEKDGVQIEVALQYNDSYQETL
                     FSFVNNINTHDGGTHLTGFRQALTRAINQYANQGNLLKGHKENLRGDDLNEGLTAVVS
                     VKVPEPQFEGQTKNRLG"
     gene            complement(1182..>1719)
                     /locus_tag="VK429_09470"
     CDS             complement(1182..>1719)
                     /locus_tag="VK429_09470"
                     /inference="COORDINATES: protein motif:HMM:NF014787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HLN92067.1"
                     /translation="SRKILVPKKGILEIRKLAESGPGSIELSASEKFLFAAKGDTEVW
                     VRLLDADFPDYRQVIPKENLLTATVARDAFAEVLRRVAVMAPDKVHSVRLSFSGKQLE
                     VSSTSPDQGEARDLLESEYEGPAMKIGFNGRYLQDAASGVSEEKMVLQLKDEVSQVIL
                     RPEKERTYLAIVMPMRIY"
BASE COUNT          278 a          565 c          517 g          359 t
ORIGIN      
        1 cccgaggcga ttcttcgtct gcccctcgaa ctgcggctca gggaccttca ccgacaccac
       61 cgccgtcagc ccctcgttca ggtcgtcccc gcgcaggttt tccttgtgcc ccttgagaag
      121 gttcccctgg ttggcgtact ggttgatcgc gcgcgtcagc gcctgccgga agccggtcag
      181 gtgggtcccg ccgtcgtgcg tgttgatgtt gttgacgaag gagaagagcg tctcctggta
      241 cgagtcgttg tactggagcg ccacctcgat ctggacgccg tccttctccc cctcgaccag
      301 caccggcttg gcgtggagcg gcgtcttgtt ccggttcagg tgctgcacga acgagacgat
      361 gccgcccttg tactggaagt cgtgggactt gtcgttgcgc tcgtcgagga tggagatctt
      421 gaggcccgcg ttcaggaacg acagctcccg cagccgctgg gagaggacgt cgaaggagaa
      481 ctccgtctcg gtgaagatct ccgtgtccgg cttgaaggtg atcttcgtcc cattcttgcg
      541 cgacttcccc gtcaccttca ggggcgagga ggtttccccc cgggtgaagt cgatctggtg
      601 caccgacccg tcccggcgga tctcggcggt gagcttttcc gaaagggcgt tcaccacgga
      661 gacgccgacg ccgtgcagtc cccccgacac cttgtacgtg tcgcggtcga acttgccgcc
      721 cgcgtggagg atcgtcagaa ccacctcggc ggccggcttc ccctcctccg gcatgatgtc
      781 gaccgggatc ccgcgcccgt tgtcttccac cgtgaccgag ttgtcggcgt ggatgacgac
      841 ggcgatcgtg tcgcaatacc cggccatcgc ctcgtcgatc gcgttgtcga ccacctcgta
      901 gaccaggtgg tgcagcccat gggtgtccgt gctcccgatg tacatcgccg ggcgcttgcg
      961 gaccgcctcc agccccttca atacctgaat gttttctccg gtatagtcgc tgccgttccc
     1021 gttgtgcggc cggtcgtccg tcccgttcgc catgcgctct ccatcgatca tcggattaac
     1081 cttgaaatta tactacgaag gaccccgcgg ggggaaagga aacggggggc ggagcccccc
     1141 ggggagaaaa gataatttat cgaaaacgat gaggattttc cttaatagat cctcatcggc
     1201 ataacgatcg ccagataggt gcgctctttc tcggggcgaa ggatcacctg cgagacctcg
     1261 tccttcaact gcaggaccat cttctcctcc gaaacgcccg atgcggcgtc ctgcaggtac
     1321 cttccgttga acccgatctt catcgcgggg ccttcgtact ccgattccag aaggtcccgg
     1381 gcttccccct ggtccgggct ggtcgaggag acttccagct gcttccccga gaaggagagc
     1441 cgcacgctgt ggaccttgtc gggcgccatg acggcgacgc ggcgcagcac ctcggcaaag
     1501 gcatcgcgcg ccaccgttgc cgtcagcagg ttctccttcg ggatgacctg ccggtagtcc
     1561 gggaaatcgg catcgagcag ccgcacccaa acctccgtgt ccccctttgc ggcgaagagg
     1621 aatttttccg acgcggacag ctcgatcgaa ccgggcccgc tctccgcgag cttgcggatc
     1681 tccagtatcc ccttcttcgg aacgaggatc ttgcgcgac
//
LOCUS       DATGYW010000674         1518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_364505, whole genome shotgun sequence.
ACCESSION   DATGYW010000674 DATGYW010000000
VERSION     DATGYW010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364505"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..702)
                     /locus_tag="VK429_09475"
     CDS             complement(<1..702)
                     /locus_tag="VK429_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015774454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN92068.1"
                     /translation="MTTQYLLQLVISGLVVGSIYSAVALGFVIIYKATRVVNFAQGEL
                     LMVGAYVCYAFLVQMHVPFGVALLLTILFSMVLAMIIERLILRPMIGEPIISIIMVTI
                     GLSLVLRSAVSVVWGTDILVYEPKLFPQAMLMVLGVPVSLEFVWCFGLSIFLLAVFSV
                     FFKYSKAGVAMRATAFNQQVAQSMGISVKKIFALSWIISAVVSGIGGVLIGNINGINN
                     TLYHFGLKVFPATILG"
     gene            complement(716..>1518)
                     /locus_tag="VK429_09480"
     CDS             complement(716..>1518)
                     /locus_tag="VK429_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013886384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HLN92069.1"
                     /translation="KFFNAMGVNLKQIYGQTEISGISCIHREGDINFDSVGKPIPETE
                     IRLSDTGEILSRSPSVFIGYYKNPEETEKTLSDGWLHSGDAGYFNEGGHLVVIDRVKD
                     VMHLNDKTRFSPQFIENKLKFSPYIKECVCLGNQRDFIASMLCIDYPNVGKWAESRRL
                     SYTTYTDLAAKPEVLELLAKEVEKVNATLPETTRVKKFVPLYKELDADDDELTRTRKV
                     RRAFVGERYKHVIEAMYAGENAIPIDATIKYQDGKTSQIKTTLTIRNL"
BASE COUNT          289 a          455 c          475 g          299 t
ORIGIN      
        1 gccgaggatg gtggcgggga aaactttcag cccgaaatgg tacagggtgt tgttgatccc
       61 gttgatgttc ccgatgagga ccccgccgat cccggagacc accgcggaga tgatccatga
      121 cagtgcgaag atttttttga ccgagatccc catcgactgg gcgacctgct gattgaacgc
      181 ggtggcccgc atcgccacgc ccgccttcga gtatttgaaa aagacggaga agacggccag
      241 aaggaatatc gacagcccaa aacaccagac gaactcgagg gagacgggga cccccagcac
      301 catgagcatg gcctgcggaa acagcttcgg ctcgtacacg aggatgtccg tcccccagac
      361 caccgatacc gctgaccgca gcaccaggga cagtcctatc gtcaccatga tgatggagat
      421 gatcggctcg ccgatcatcg gccgcaggat cagccgctcg atgatcatcg cgaggaccat
      481 cgagaagagg atcgtgagca ggagggcgac cccgaagggg acgtgcatct ggacgaggaa
      541 ggcgtagcag acgtaggccc ccaccatgag gagctccccc tgggcgaagt tcaccacgcg
      601 ggtggccttg tagatgatga cgaacccgag cgcgaccgcc gagtagatgc tcccgaccac
      661 caggccgctg atcaccagct gcaacaggta ttgcgtcgtc attcgcgtcg tctccctaca
      721 ggttccggat ggtgagcgtc gtcttgatct gcgacgtctt gccatcctgg tatttgatcg
      781 tcgcgtcgat cgggatggcg ttttccccgg cgtacatcgc ctcgatcacg tgcttgtacc
      841 gctccccgac gaacgcccgg cggaccttgc gcgtccgggt cagctcgtcg tcgtccgcgt
      901 cgagctcctt gtagagcggg acgaacttct tcacccgcgt cgtctccggg agggtcgcgt
      961 tcaccttttc gacctccttc gccaggagct cgagcacctc cggcttcgcg gcgaggtccg
     1021 tgtacgttgt gtaggagagg cggcggctct cggcccattt ccccacgttg ggatagtcga
     1081 tgcagagcat cgacgcgatg aagtcgcgct ggttcccgag acagacgcac tccttgatgt
     1141 agggggagaa cttcagcttg ttctcgatga actgcggcga gaaccgggtc ttgtcgttca
     1201 ggtgcatcac gtccttcacg cggtcgatca cgaccaggtg gccgccttcg ttgaagtagc
     1261 ccgcgtcgcc cgagtggagc cagccgtcgc tcaacgtctt ttccgtctcc tcggggtttt
     1321 tgtagtagcc gatgaagacg gacggggagc gcgacaggat ctcgccggtg tcggagagcc
     1381 tgatctcggt ctcggggatc ggcttgccga ccgagtcgaa gttgatgtcg ccttcgcggt
     1441 ggatgcacga gatgccggag atctccgtct ggccgtagat ctgcttgagg ttcacgccca
     1501 tcgcgttgaa gaacttga
//
LOCUS       DATGYW010000675         1776 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_264611, whole genome shotgun sequence.
ACCESSION   DATGYW010000675 DATGYW010000000
VERSION     DATGYW010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264611"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(157..597)
                     /gene="rplO"
                     /locus_tag="VK429_09485"
     CDS             complement(157..597)
                     /gene="rplO"
                     /locus_tag="VK429_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013623647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HLN92070.1"
                     /translation="MKLTDLRPAKGAKSARKRVGRGEGSGLGKTSGKGNKGLKARSGG
                     GTKPGYEGGQMPLQRRLPKRGFVNVFREEMAVVNVKELNRFEAGSVVDVEVLRQEGLV
                     KGSCPGGVKLLGNGEVTRKLIVKVDRASKAAIEKVAAAGGTVEV"
     gene            complement(594..788)
                     /gene="rpmD"
                     /locus_tag="VK429_09490"
     CDS             complement(594..788)
                     /gene="rpmD"
                     /locus_tag="VK429_09490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012536094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HLN92071.1"
                     /translation="MSGKLRITLLRGLSGRTAYHRKVVQGLGITRLNRPVVRLDTPEI
                     RGMVEKVKFLVRMEKVGEAS"
     gene            complement(785..1285)
                     /gene="rpsE"
                     /locus_tag="VK429_09495"
     CDS             complement(785..1285)
                     /gene="rpsE"
                     /locus_tag="VK429_09495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009353893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HLN92072.1"
                     /translation="MKRVDPEGLDLKDRVVHISRVAKVVKGGRRFSFSAVVVVGDANG
                     HVGTGLGKANEVPDAIRKAVQNAKRSLILVPLIDGTIPHGVTGEFGASKVIIRPASPG
                     TGVIAGGGVRAVIESSGISNILTKSLGSNNPHNLVKATIEGLSQLRTAAQISAVRGPR
                     EEEATA"
     gene            complement(1326..1694)
                     /gene="rplR"
                     /locus_tag="VK429_09500"
     CDS             complement(1326..1694)
                     /gene="rplR"
                     /locus_tag="VK429_09500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012529382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HLN92073.1"
                     /translation="MSQKSQRETARQNRKGRIRKRIFGTEQRPRLSVFRSAKHIYAQL
                     VIDSTGSTILAASTLSPDLRAEIGDLDKSDAAKKVGQWIGKKALEKNIQQVVFDRNGF
                     LYHGRIKALADGARESGLVF"
BASE COUNT          260 a          631 c          513 g          372 t
ORIGIN      
        1 tggctgtcga acaccgcctt gagcgcaagg gtgtcgatcc ccggcgtggg gatgtggata
       61 ccgatgcggt agacgatgag caggagcccc gtgacgagga tccgccgctt gagctccgga
      121 acccgggtga tgttctggaa accgtcgagc accggatcag acctccacgg tcccgccggc
      181 ggcggcgacc ttctcgatgg ccgccttgct ggcccgatcc accttcacga tgagtttccg
      241 ggtgacctcg ccgtttccga gaagcttgac cccccccgga caggagccct ttaccaggcc
      301 ttcctgccga agcacctcga cgtcgacgac ggagcccgcc tcgaaccggt tcagttcctt
      361 cacgttgacg acggccatct cctcccggaa gacgttgacg aacccgcgct tcgggagccg
      421 ccgctggaga ggcatctgcc cgccttcata ccccggcttc gtcccgccgc cgctgcgcgc
      481 cttgaggccc ttgttccctt tgccggaggt cttcccgagc ccggagcctt cgccacgccc
      541 gacacgcttg cgcgcgcttt tcgccccttt tgcggggcgg agatccgtta gcttcatgac
      601 gcctctccca ccttttccat ccggacgagg aacttgacct tttccaccat cccgcggatc
      661 tccggcgtgt ccagcctgac gacgggacgg ttcagccggg tgatcccgag tccctgaacg
      721 accttgcggt ggtatgcggt tctcccgctc aaccccctca ggagtgtgat gcgcaatttt
      781 ccgctcatgc cgtcgcctct tcctctctcg ggccccggac cgcagagatc tgcgccgcag
      841 tccgcaactg ggaaagccct tcgatcgtcg ccttcacgag gttgtgagga ttgttgctcc
      901 ccagggactt cgtcaggatg ttcgagatgc cgctggattc gatcacggcg cggaccccgc
      961 ctcctgcgat gacgccggtc cccggtgagg cgggccggat gatgaccttc gaggccccga
     1021 actcgccggt cacgccgtgc gggatggtgc catctatcag cggaacgagg atcagcgacc
     1081 gcttggcatt ctgcaccgcc tttcggatcg cgtcgggtac ctcgttcgct ttccccagtc
     1141 ccgtcccgac gtgcccgttg gcgtcaccga cgacgacgac cgcgctgaag gagaagcggc
     1201 gtccgccctt gacgaccttg gcgacgcggc tgatgtgcac gacgcggtcc ttcaaatcca
     1261 gcccttccgg atcgactctc ttcaagcctt cctccccgtc ccctcgcgaa agtgtgcgcc
     1321 cattttcaga ataccaaccc ggattcccgc gccccgtccg ccagggcctt gatccgccca
     1381 tggtagagga acccgttccg gtcgaacacc acctgctgga tgtttttttc cagtgccttt
     1441 ttcccgatcc actgccccac cttctttgcg gcgtcgctct tgtcgagatc cccgatctcc
     1501 gcccggagat ctggggagag ggtggatgcc gccaggatgg tcgaccccgt ggagtcgatc
     1561 accaactggg cgtagatgtg cttcgcgctg cggaagacgg acaaccgcgg acgctgctcg
     1621 gtgccgaaga tccgcttgcg gatccggccc ttccggttct gtcgtgcggt ttcccgctgg
     1681 cttttctggc tcatggcgtt cggatcccca tcgtaaggaa ttgcgcgttg tccactactt
     1741 gcccgccgcc ttcccgacct tcttgatcag ccgttc
//
LOCUS       DATGYW010000676         4395 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_52074, whole genome shotgun sequence.
ACCESSION   DATGYW010000676 DATGYW010000000
VERSION     DATGYW010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4395
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52074"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            6..170
                     /locus_tag="VK429_09505"
     CDS             6..170
                     /locus_tag="VK429_09505"
                     /inference="COORDINATES: protein motif:HMM:NF024639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HLN92074.1"
                     /translation="MVGDSSNDVLAGKAAGTVTCGVTYGLAASGFAEHPPDFTVDRFP
                     DLFHRIRPAG"
     gene            167..772
                     /locus_tag="VK429_09510"
     CDS             167..772
                     /locus_tag="VK429_09510"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HLN92075.1"
                     /translation="MREKPFPVKPLLVFTAVIAAVRLSLFVPPGRFLSPSLLAAALFL
                     YAPLPRYWRRGFPAWARATDPGRSVAFFAMLAGVGAIAYFMFVRLPLPPAISPYHGTV
                     PLTAAMAAHHLLLVALPEEVFFRGYLYDAFEEAGREPVVPVALLFAIGHFVIAPSPFR
                     LLTFFPALLLGWGRRRSGNVYVPTALHFLYNLFPSLIGGPT"
     gene            769..1866
                     /locus_tag="VK429_09515"
     CDS             769..1866
                     /locus_tag="VK429_09515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92076.1"
                     /translation="MSDTRVASGHLFFFYAYDAGFEIALEKARALCEASDSPGIAGLR
                     PAPAHLQYRPRPLTVPAGVVPVTVSGKTFSLDATMKIFDFGALSVTLTLPLEDLSLDA
                     YAEVALSLASENGMEKSARELARRLFERIRPAVFRPMLADLAEEYRVWHVGGFSPGLS
                     GTEALARFPQEIARLLTLERGDLSEAAVAEIVRTPIRYFDNDLFLAEWNAAFVYDPKF
                     QDTAEVLEFLNIQVLELRFFDRLLHEAIEGVSEELRPRRRLFHILHDPYEVPLRRLSG
                     IRTDVSLIRERIYNALKLVGDAYLARVYEEARRKVGAEKHEGTVRDQLAALTDIYTVL
                     NNQAQAARAETLEMIIILLIAIEIVMGLLRW"
     gene            1937..3124
                     /locus_tag="VK429_09520"
     CDS             1937..3124
                     /locus_tag="VK429_09520"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012530771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HLN92077.1"
                     /translation="MKIRTIDQLDLSGKRTLIRVDFNVPMDKAGKVTDDTRLQAALPT
                     IRLAIERGAKTILLSHLGRPKGKRLPEMSLAPVAPRLSQLLGRPVSFAEDCLGGPAET
                     AVAAMKPGDVLLLENVRFHAGEEKNDEELGKRLAALCDVYVNDAFATAHRGHSSNVAI
                     VKFVKERAAGLLMKNEIAYFEKALVSPARPLAAIFGGAKISGKIEAINNVLGKVDKIL
                     IGGAMANTFLAALGYGIGKSLYEAEMVDTAKRVLAGAAERKVRLYLPVDVVVAERLEA
                     SAPTRVVPAQEIPDGMMALDIGPATGALFREALHDAKTIVWNGPMGAFETAPFAAGTQ
                     TVMRALAESGAITIVGGGDTDTALHKAGLFSRMSYVSTGGGAFLELLEGKHLPGIAAL
                     EEE"
     gene            3147..>4395
                     /gene="ligA"
                     /locus_tag="VK429_09525"
     CDS             3147..>4395
                     /gene="ligA"
                     /locus_tag="VK429_09525"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HLN92078.1"
                     /translation="MGGISPKSRAEELRRLLRYHNDRYYRDDAPEISDAEYDALFREL
                     QQLEEAHPGLSDPDSPTRRVGAEPVAAFGTVVRDIPMLSLQNAFSEEELHEFDVRVRR
                     FLAGRGVPADALDRLGYVAEVKIDGLAVELTYEKGRYARGATRGDGVRGEDVTANLRT
                     IPDVPLTVPRESSKGGAPPPDLLTARGEAYMEKRDLAALNRGRERAGEPVFANPRNAA
                     AGSVRQLDPKVTASRRLKLWVYGAGRAEGAGFPSHWDELSWLSELGLPVNWAGSRRCR
                     DIAEAVAFYREMGEAKESLPYEIDGVVVKVNDTALQRELGEISRSPRWAVAAKFSPDR
                     AETTVEEIVVSVGRTGTITPVAFLSPVVVRGVTVRRATLHNQDLIDAKDIRVGDRVLV
                     QRAGDVIPEVVESLSATSGAPGRG"
BASE COUNT          672 a         1509 c         1495 g          719 t
ORIGIN      
        1 cgatcatggt cggggattcc agcaacgacg tgctcgccgg aaaggcggcc ggcaccgtca
       61 cctgcggcgt cacgtacggc ctggcggctt ccgggttcgc cgagcacccg cccgacttca
      121 ccgtcgaccg cttccccgac ctgttccacc gcatccggcc ggcgggatga gagaaaagcc
      181 gttccccgtg aaaccgttgc tggtcttcac cgcggtgatc gcggcggtgc ggctctcctt
      241 gtttgtcccg cccggtcgct ttctttcccc gtcgctcctc gccgcggcgc tgttcctgta
      301 cgcccccctc ccccggtact ggcgccgcgg attcccggcg tgggctcgcg cgacggaccc
      361 gggcaggagc gtcgccttct tcgccatgct cgccggcgtc ggggcgattg cctacttcat
      421 gttcgtccgg cttcccctgc ccccggcgat ctccccgtac cacgggaccg ttcccctcac
      481 ggcggcgatg gccgcccacc atctgctgct ggtcgccttg cccgaggagg tcttcttccg
      541 ggggtacctg tacgacgcct tcgaggaggc ggggcgggaa ccggtggtgc ccgtggccct
      601 cctcttcgcc atcggccact tcgtgatcgc cccgtccccg ttccgccttc tgaccttctt
      661 ccccgcgctc ctgctcggat ggggaagaag gagatcgggg aacgtgtacg tcccgacggc
      721 cctccatttc ctgtacaacc tcttcccatc cctgatcgga ggtccgacgt gagcgacacc
      781 cgcgtggcat ccgggcacct gttcttcttc tacgcctacg acgctggctt cgagatcgcg
      841 ctggagaagg cgcgcgccct ttgcgaggcg tccgattccc cgggaatcgc gggcctgcgc
      901 ccggcgcccg cacacctcca gtatcggccg aggccgctca cggtgcccgc cggggtggtt
      961 cccgtcaccg tttccgggaa aacgttctca ctcgacgcca cgatgaagat cttcgacttc
     1021 ggggcactct ccgtgacgct caccctcccc ctcgaggatc tctccctcga tgcgtacgcg
     1081 gaggtcgcgc tttccctcgc ctcggagaac gggatggaga agtccgcccg ggagttggcg
     1141 cggcggctgt tcgagcggat ccgccccgcc gtctttcgcc cgatgctggc ggacctcgcg
     1201 gaggaatacc gcgtgtggca cgtgggcggg ttctccccgg gattgagcgg gacggaggcg
     1261 ctcgcccgat ttccgcaaga gatcgcgcgc ctgctgaccc ttgaacgggg ggacctgagc
     1321 gaagccgcgg tcgcggaaat cgtccgcacc ccgatccggt acttcgacaa cgacctgttc
     1381 ctcgcggagt ggaacgccgc cttcgtttac gacccgaagt tccaggacac ggcggaggtg
     1441 ctcgagttcc tgaacatcca ggtgctcgaa ctgcgcttct tcgaccgtct cctgcacgag
     1501 gcgatcgaag gggtgtccga ggagctgcgc ccccgtcgcc ggctcttcca catcctccac
     1561 gacccgtacg aggtcccgct tcgcagactg tccgggatcc ggaccgacgt ctccctcatc
     1621 cgggaacgga tctacaacgc gttgaaactc gtgggggacg cctacctcgc ccgcgtgtac
     1681 gaggaggcgc gccggaaggt gggggcggag aagcacgagg ggacggtgcg cgaccagctc
     1741 gccgccctca cggacatcta cacggtgctg aacaaccagg cccaggcggc gcgcgcggag
     1801 acgctcgaga tgatcatcat cctcctcatc gcgatcgaaa tcgtgatggg cctgctgcga
     1861 tggtaggccc cccggtattt ttgataatat ccataccgta cgctccccaa acgtccgccc
     1921 aaggagggtt tccggaatga agatccgcac gatcgaccaa ctggacctgt ccggcaagag
     1981 aacgctcata cgcgtcgact tcaacgtgcc gatggacaag gccggcaagg tgaccgacga
     2041 cacgcggctc caggccgcgc tccccacgat ccggctggcg atcgagcgcg gggcgaagac
     2101 gatcctgctc tcgcacctcg ggcgccccaa ggggaaacgg ctgccggaga tgagccttgc
     2161 gccggtcgcg ccgcgcctgt cccagctcct cgggcggccg gtctccttcg cggaagactg
     2221 cctgggcggg cccgcggaaa cggccgtggc cgcgatgaag cccggggacg tcctgctcct
     2281 cgagaacgtg cgcttccacg ccggggagga gaagaacgac gaggaactgg gcaaacggct
     2341 tgccgccctc tgcgatgtct acgtcaacga cgccttcgcc acggcgcatc gggggcactc
     2401 ctccaatgtg gccatcgtca agttcgtgaa ggagcgcgcg gccggcctcc tgatgaagaa
     2461 cgagatcgcc tatttcgaga aggcgctcgt ttcccctgcc cgtcccctgg cggcgatctt
     2521 cggcggggcg aagatctccg gaaagatcga ggcgatcaac aacgtcctcg gaaaggtcga
     2581 caagatcctg atcggcgggg cgatggcgaa caccttcctg gccgcgctgg gatacggtat
     2641 cgggaaatcg ctctacgagg ccgagatggt cgatacggcg aagcgtgtcc tcgccggtgc
     2701 ggcggagcgg aaggtccggc tctacctgcc cgtggacgtg gtggtggcgg aacggctgga
     2761 ggcttccgcc ccgacccggg tcgtgcccgc gcaggagatc cccgacggga tgatggcgct
     2821 cgatatcggt cccgcgacgg gagccctttt ccgggaggcg ctgcacgacg cgaagaccat
     2881 cgtgtggaac ggcccgatgg gggccttcga aaccgcgccg ttcgcggcgg ggacgcagac
     2941 ggtgatgcgg gcgctggccg agagcggcgc gatcacgatc gtcggcggcg gggataccga
     3001 caccgccctc cacaaggcgg gactcttctc ccggatgtcg tacgtctcca cgggcggcgg
     3061 ggccttcctc gaactgctcg aggggaagca tctcccgggg atcgccgcgc tggaggagga
     3121 gtaaggcgcg gcgccacgga ggcagggtgg gcgggatttc ccccaagagc cgcgcggagg
     3181 agttgcgcag gctcctccgc tatcacaacg accggtatta ccgggacgac gctcccgaaa
     3241 tatccgacgc cgaatacgac gccctgttcc gcgagctcca acagctcgag gaggcgcatc
     3301 ccgggttgtc cgaccccgat tccccgaccc ggcgcgtggg ggcggagccg gtagcggcgt
     3361 tcggaaccgt cgtccgcgac atcccgatgc tctccctgca gaacgccttc tccgaagagg
     3421 agcttcacga gttcgacgtc cgcgtccgcc gtttcctcgc cggtcgcggt gttcctgcgg
     3481 atgccctgga tcgcctggga tacgtcgcgg aagtgaagat cgacggtctc gcggtcgagc
     3541 tcacctacga gaagggccga tacgcccggg gcgccacgcg gggagacggt gtccgggggg
     3601 aggacgtgac ggcgaacctg cggaccattc ccgacgttcc gttgaccgtc cctcgcgaat
     3661 cgtcgaaagg gggcgccccg cccccggacc tcctcacggc gcgcggggaa gcgtacatgg
     3721 agaagcgcga tctcgcggcg ctgaaccggg gccgggaacg cgcgggggag cctgtcttcg
     3781 ccaacccccg gaacgccgcg gcgggatcgg tccggcagct cgatcccaag gtgacggcga
     3841 gtcgccgcct gaagctttgg gtctacggcg ccgggcgggc cgagggggcg ggcttcccct
     3901 cccactggga cgagctctcc tggctgtccg aactgggcct tccggtcaac tgggccggga
     3961 gccggcgctg ccgggacatc gccgaggccg tcgccttcta ccgggaaatg ggagaggcga
     4021 aggagtcgct tccgtacgag atcgacgggg tggtggtgaa ggtgaacgac accgcgctcc
     4081 agcgggagct cggcgagatc tcgcgctccc cccggtgggc cgtcgcggcg aagttctccc
     4141 cggaccgtgc ggagaccacc gtggaggaga tcgtcgtcag cgtgggacgg acggggacga
     4201 tcaccccggt ggccttcctg tcccccgtcg tggtgcgcgg cgtcaccgtg cggcgcgcca
     4261 cgctgcacaa ccaggacctg atcgacgcga aggatatccg ggtgggcgac cgggtcctcg
     4321 tgcagcgggc gggggacgtg atcccggagg tggtggagtc cctttccgcg acgagcggtg
     4381 cccccgggcg gggtc
//
LOCUS       DATGYW010000677         1618 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_264892, whole genome shotgun sequence.
ACCESSION   DATGYW010000677 DATGYW010000000
VERSION     DATGYW010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264892"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..1591)
                     /gene="guaA"
                     /locus_tag="VK429_09530"
     CDS             complement(41..1591)
                     /gene="guaA"
                     /locus_tag="VK429_09530"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014029411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HLN92079.1"
                     /translation="MDGKVLILDFGSQYTMLIARRVREQRVYSEIHPFNVGAEFVRNF
                     APAGIILSGGPSSVYDADAPRIPREVLELGIPVLGICYGMQLIADLLGGKVGRSEDRE
                     YGVATIRGQWGSPLFLGIEEFRHDMEIPVWMSHGDRIDELPKGFSSIARSGSSPVAAM
                     SNREGTIFGVQFHPEVVHTPRGTEILANFLFRVCDLSPDWTMHSFIESSVGKIREKTG
                     SEGVVLGLSGGVDSSVAAVLLHRAIGDRLTCIFVDNGLLRAGEAEEVVRTFRDAIGLR
                     LDFVDASAQFLEALADVEDPERKRKIIGELFIRVFEEEARKIPGVGFLAQGTLYPDVI
                     ESVSFKGPSAVIKSHHNVGGLPERMHLKLVEPLRELFKDEVRELGRELGVPSRVLERQ
                     PFPGPGLAVRIIGPVTEERLRILREADLIVDAEIRAAGLYESIWQSFAVLLPIKTVGV
                     MGDFRTYENVIAVRAVHSQDGMTADWVRLPYDVLQRISTRIINEVKGINRVTYDVSSK
                     PPGTIEWE"
BASE COUNT          279 a          559 c          516 g          264 t
ORIGIN      
        1 aggctgtatt ccgaatggag gtggaggtgg acgaagttct tcattcccac tcgatggttc
       61 ccgggggctt cgaggagacg tcgtacgtaa cgcggttgat ccccttcacc tcgttgatga
      121 tccgcgtgga gatccgctgc agcacgtcgt acggaagccg gacccagtcg gcggtcatcc
      181 cgtcctggct gtggaccgcc cggacggcga tgacattctc gtacgtccgg aaatccccca
      241 tcacgccgac cgtcttgatc gggagaagga cggcgaacga ctgccagatc gactcgtaga
      301 gccccgccgc ccggatttcc gcgtcgacga tcaggtcggc ctcgcgaagg atgcgcagcc
      361 gctcttcggt gactggcccg atgatgcgga ccgcgagacc cggcccgggg aacggctgcc
      421 gctcgagcac gcgggaaggg accccgagct cccgacccag ctcgcggacc tcgtccttga
      481 acagttcgcg cagcggctcg acgagcttca ggtgcatcct ttccgggagc ccccccacgt
      541 tgtggtggga cttgatgacg gcggagggac ccttgaacga cacgctctcg atcacgtccg
      601 ggtagagggt cccctgcgcg aggaagccga cgcccgggat cttccgggcc tcctcctcga
      661 agacgcgaat gaagagctcc ccgatgatct tccgtttccg ctccgggtcc tccacgtcgg
      721 cgagcgcctc gagaaactgc gcggaggcgt cgacgaaatc gagccgcagc ccgatcgcgt
      781 cgcggaaggt ccggacgacc tcctccgcct ccccggcccg cagcagcccg ttatcgacga
      841 agatgcaggt aagccggtcg ccgatcgccc tgtgcaggag caccgccgcg acggacgagt
      901 cgaccccccc ggagagcccg aggacgaccc cctccgaacc ggtcttctcc cggatcttcc
      961 cgacgctgct ctctatgaag gagtgcatcg tccagtcggg cgaaaggtcg cagacgcgga
     1021 acaggaagtt ggcgaggatc tccgtccccc gcggtgtgtg caccacctcg gggtggaact
     1081 ggaccccgaa gatcgtcccc tcgcggttcg acatcgcggc gaccggcgag ctccccgaac
     1141 gcgcgatgga ggagaatccc ttcggcagct cgtcgatccg gtccccgtgg ctcatccaga
     1201 cagggatctc catgtcgtgg cggaactcct cgatcccgag gaagaggggg ctcccccatt
     1261 gcccccggat ggttgcgaca ccgtactccc ggtcctccga ccggccgacc ttgccgccca
     1321 gcaggtccgc gatcagctgc atcccgtagc agatccccag cacgggaatg ccgagttcga
     1381 gcacctccct cgggatccgt ggagcgtcgg catcgtagac gctggacggt ccaccggaga
     1441 ggatgatccc ggccggggcg aagttgcgca cgaactccgc tcccacgttg aaggggtgga
     1501 tctcgctgta gacgcgctgc tcccgcacgc gccgcgcgat gagcatcgtg tactgcgacc
     1561 cgaagtcgag gatgaggacc tttccgtcca acgcgctact ccacccgata gttcgggg
//
LOCUS       DATGYW010000678         5329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_364871, whole genome shotgun sequence.
ACCESSION   DATGYW010000678 DATGYW010000000
VERSION     DATGYW010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 5329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5329
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364871"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            241..2061
                     /locus_tag="VK429_09535"
     CDS             241..2061
                     /locus_tag="VK429_09535"
                     /inference="COORDINATES: protein motif:HMM:NF012861.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HLN92080.1"
                     /translation="MPLTSPPLSRSRLAKHLHAGSAAVRRFIYRILERFHIGDEAFHI
                     LLATFIGALAGLGSVAFILLIRFFEKLFFGGIFHAMGSPPYLIFLLPLLGGLLIGPLI
                     QRFPREAKGDGVPSAMETIALHGGIIRPRTVGLRTLTAAVTIGSGGSVGREAPIAQIG
                     AAIGSVVGQFLKVSSSRMRIFVACGAAGGIAAVFNAPIGGVFFSLEVLLGDFAAATFA
                     PIVIASVVSTTVARLLLGNVLIFEVPPYILTGIWDLVLSAVLGAFCGLAAILFIRGLE
                     SAEKQFSSSRIPLWARAAVGGGMTGVVAIFFPQVLGTDATTLNEAFAGMFPWSLLLLI
                     GYLKIVATSFSLGSGGSGGVLGPAVFIGGILGAFVGTFASALFPGLFGFVDGYALIGM
                     AAFLAPVIGGPITSILILFEMAGNYTIILPLLVAVVNAMLVAHQFSRYSLYTHKLHEK
                     GIDLVSGREESVLKQVRVRDVMREKFDAVLPSASFGSLAASFFGSKIDYLYLTGEQGD
                     LTGVVSLTDLRPHLKDESLWDLVCARDVATPDPVAVMPSESMLDALNKFAYRNVAQLP
                     VVSDPHTRKLIGVVRRSDLLEGYQKIVLRKPEPPSDERSA"
     gene            2065..2607
                     /locus_tag="VK429_09540"
     CDS             2065..2607
                     /locus_tag="VK429_09540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011735005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HLN92081.1"
                     /translation="MVENRESRRDREIADVLDNLRRVFKVVHRYSKRAEKVGGMTGPQ
                     VWAMKVLAESAPIRVTDLARRMYLHPSTVVGILDRLEQQDMVTRTRSEKDHRVVTVSL
                     TANGRETVSKVPQIAQGLLLKGLQELSDADLQTTSEGLRRLVDILGVEGMPPPLLLSP
                     EVNAPAVKIDDPQNRAGEHP"
     gene            2604..4874
                     /locus_tag="VK429_09545"
     CDS             2604..4874
                     /locus_tag="VK429_09545"
                     /EC_number="2.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020710644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003825 - alpha,alpha-trehalose-phosphate
                     synthase (UDP-forming) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HLN92082.1"
                     /translation="MKITIRLVVSLVLVVALVAVAFSLYQVREERIRLTSELERRTII
                     LAESLQESVTPLVASESREKLDRLVQRFGNRDRFQGIAIHDADGRLLSSTADLEPQIP
                     GSVPQVTRVLAEGRPAGGFIRVGNRRIYLYTFPLTSGEEAVGALTLFHNASYIDVRLE
                     EIWRHNLIRFLILFVLVVAITLIVVRWSITGPIAQVAVWMRDLRTGKTRTAKPANLPK
                     MDAALDPLISEASRMAKSLTVARARADKASSQPVRAESPWTADRLRDHMLAELGGKKL
                     YLVSNREPYMHEKDGPGIRCVVPAGGLVTALDPVMRVCDGLWIAHGSGDADRETVDGN
                     NKLRVPPGDPAYTLKRVWLTKEEEDGYYYGFANEGLWPLCHITHHRPEFRLEDWAHYR
                     KVNEKFADALLQEIAGEESPLVLVQDYHLALLPSLIKERRPDAKVAIFWHIPWPNPEA
                     YGICPWHQEILQGMLGADIIGFHIQFHCNNFLETVDRFLESKIDWEHFSVTRGGHATL
                     IKPFPISVDFELPSGAPVSETWPAKEDLLRMLGIEVEYLGVGVDRIDYTKGIPERFRA
                     IERFFEKFPEYLGRFTFVEMGAPSRTHIKKYRDLMVEIEEAVEKINWRFQTKTWRPIV
                     FLKAHHTHEAIAPYYRASDLCMVTSLHDGMNLVAKEFVAARDDEDGVLILSQFTGASR
                     ELKDAVIVNPYDIEQMADAIRLSLGMPPAERRDRMGRMRETLLEYNIYRWAGKLIAEL
                     ARLRLTDGTSAQEAAQ"
     gene            4871..>5329
                     /gene="otsB"
                     /locus_tag="VK429_09550"
     CDS             4871..>5329
                     /gene="otsB"
                     /locus_tag="VK429_09550"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HLN92083.1"
                     /translation="MNYVPGNRSLWVFDFDGTLSPIVPDRTGARLHRECERMLRFLAR
                     SPWNRVAVLSNRTLDDIVSRLPVPGVFVGGASGLEWRLPGGRRIGPGSASEALLAAKR
                     QAVFPLLKEMASLPGVEIEDKRWSVAVHYRNAPPRSFRRRVSLLHRLRNRK"
BASE COUNT          937 a         1740 c         1687 g          965 t
ORIGIN      
        1 ccccccccgc gaacgcgatc gccgggaaca ggaggacggc ggcgaggaac agaattccgg
       61 cggacggcat tcttctcaac gtacgacccc ttctctttat cgatcacgcc tcagcggatg
      121 cagggatcgg tcactccagc aaagccggca tgccggcgat cttccgtatt cccccgtctc
      181 catcatcatg gcttataata caaatgtttt gtatcgtaaa caaacggagg gaaggacacg
      241 ttgccgctca cctcaccccc tttgtcgagg agccgcctcg cgaagcacct tcacgccggc
      301 tccgcggcgg tgcgccggtt catctaccgg atcctcgagc ggttccacat cggcgacgag
      361 gcgttccata ttctgctggc cacgttcatc ggagccctgg ccggactcgg ctcggtggcg
      421 ttcatcctgc tcatccggtt cttcgagaaa ctcttcttcg gcgggatctt ccatgcgatg
      481 gggagtcccc cgtacctgat atttctcctc ccgctgctcg ggggtctcct gatcggtccg
      541 ctcatccagc ggttcccgag agaagccaaa ggggacggcg tccccagcgc gatggaaacg
      601 atcgctttgc acggcgggat catccgcccc cgcacggtgg ggctgcggac cctcacggcc
      661 gcggtcacga tcggctccgg cggttccgtg ggacgggagg ccccgatcgc ccagatcggg
      721 gcggcgatcg gatcggtcgt cgggcagttc ctcaaggttt cctcaagccg catgcgcatc
      781 ttcgtcgcgt gcggagccgc cggcgggatc gcggcggtct tcaacgcccc catcggcggg
      841 gtcttcttca gcctggaagt cctcctgggg gatttcgcgg ccgccacgtt tgctcccatc
      901 gtgatcgcct cggtcgtctc caccaccgtc gccaggctgc tgctggggaa cgtcctgatc
      961 ttcgaggtgc ctccctacat cctcacggga atttgggatc tggtcctcag cgccgtcctc
     1021 ggcgcattct gcggcctcgc ggccatcctt ttcatacgag ggctcgagtc cgcggagaaa
     1081 cagttctcct cctcccggat ccccctttgg gccagagccg ccgtgggggg cgggatgacc
     1141 ggggtggttg ccatcttttt cccgcaggtc ctcgggacgg atgcgacaac cctcaatgaa
     1201 gccttcgcgg gaatgttccc gtggtctctg ctcctcctga tcggctacct gaagatcgtg
     1261 gcgacctcct tttccctcgg gtccggagga tcggggggcg tcctggggcc ggcggtcttc
     1321 atcggcggga ttctcggggc cttcgtggga accttcgcaa gcgccttgtt cccggggctg
     1381 ttcggtttcg tcgacgggta cgccctgatc ggaatggccg cattcctcgc cccggtcatc
     1441 gggggaccca tcacgtccat cctgatcctg ttcgagatgg ccggaaatta cacgatcatc
     1501 ctgcccctgc tggtggccgt ggtcaacgcg atgctcgtgg cgcaccagtt ctcccgatac
     1561 tccctgtaca cccacaaact gcacgaaaag gggatcgacc tcgtgtcggg tcgcgaggag
     1621 agcgtcctca aacaggtccg ggtgcgcgac gtgatgcgcg agaagttcga cgcggtcctg
     1681 ccgtcggcat ccttcggcag cctggccgcg tcctttttcg gcagcaagat cgactacctt
     1741 tacctcaccg gcgagcaggg agacctgacg ggggtcgtct ccttgacgga cctgcgaccg
     1801 cacctgaagg acgagagtct ctgggacctt gtctgcgccc gggacgttgc cacgcccgat
     1861 ccggtggccg tcatgccgag cgagagcatg ctcgacgcgc tgaacaagtt cgcctaccgc
     1921 aacgtcgcac agctccccgt ggtatccgac ccccacacga gaaaactgat cggcgtggtg
     1981 cggcggagcg atctcctgga agggtatcag aagatcgtgc tgcgaaaacc ggaaccgccg
     2041 tccgatgaaa ggagcgcttg acgcatggtg gagaaccggg aatcacggag ggatcgggag
     2101 atcgccgacg tgctcgacaa ccttcgccgc gtcttcaagg tggtccacag atattccaag
     2161 cgcgccgaaa aggtcggggg gatgaccgga ccgcaggtgt gggccatgaa ggtgctcgcg
     2221 gaatccgcgc cgatccgggt gaccgacctc gcccgccgga tgtacctcca cccgtccacg
     2281 gtggtcggga tcctggaccg cctggagcag caggacatgg tcacgcggac gcggtcggag
     2341 aaggaccacc gcgtcgtgac ggtctcattg accgcgaacg ggagggagac ggtgtcgaaa
     2401 gtcccgcaga tcgcccaggg gcttctcctc aagggattgc aggagctgtc cgacgcggac
     2461 ctgcagacca cctccgaggg gttacggcga ctggtcgaca tcctgggcgt ggaagggatg
     2521 ccccccccgc tcctgctgtc accggaagtc aacgcgccgg cggtgaagat cgacgatccg
     2581 cagaatcgcg cgggagaaca tccatgaaga tcacgatccg cctcgtcgtc tccctcgttc
     2641 tcgtggtcgc ccttgtggcc gtcgcgttct ccttatacca agtccgggag gaacggatcc
     2701 gtctgacgtc cgagcttgag cggcggacca tcatcctggc cgaaagcctc caggaatccg
     2761 tcacccccct ggttgcgtcg gaatcccggg agaaactgga tcgcctcgtt cagcggttcg
     2821 gaaaccgcga tcgattccag gggatcgcga tacacgacgc cgatggccgg cttctgtcct
     2881 cgaccgcgga cctcgaaccc cagatccctg gatccgtccc tcaagtcacc cgcgttcttg
     2941 cggaaggacg gcctgcgggc ggcttcatcc gcgtcgggaa ccggaggatc tacctctaca
     3001 ccttccctct cacctcgggg gaagaggcgg tcggggccct gacgctcttc cacaacgcct
     3061 cgtacatcga cgtccggctc gaagagatct ggaggcacaa cctcatccgc ttcctgatcc
     3121 tgttcgtgct ggtcgtcgcg atcacgctga tcgtcgtgcg ctggagcatc accggcccga
     3181 tcgcccaggt cgcggtatgg atgcgggacc tgcgcacggg gaaaaccagg accgccaagc
     3241 ccgccaatct cccgaagatg gacgcggcgc tggatcccct gatctcggag gcgagccgga
     3301 tggcgaagag cctgaccgtc gcgcgggcaa gggccgataa ggcttccagc cagcccgtcc
     3361 gcgcggaatc cccctggacg gccgaccgcc tgagggacca catgctcgcg gagctcggag
     3421 ggaaaaaact gtatctcgta tcgaaccggg agccgtacat gcacgagaag gacggcccgg
     3481 gcatccggtg cgtcgtcccc gctggcggcc tggtcaccgc gctcgatccc gtgatgcggg
     3541 tctgcgacgg tctctggatc gctcacggaa gcggcgatgc ggaccgcgaa acggtcgacg
     3601 gcaacaacaa gctccgcgtg cctcccgggg atccggccta caccctgaag agggtatggc
     3661 tgaccaagga ggaagaggac ggctactatt acgggttcgc aaacgagggg ctgtggccgc
     3721 tctgccacat cacccaccac cgccccgaat tccgtctgga ggactgggcc cattaccgga
     3781 aggtgaacga gaagttcgcc gacgccctcc tgcaggagat cgccggggag gaatcccccc
     3841 tggtcctcgt tcaggactac catctcgccc tgctcccgtc gttgatcaag gagaggcgcc
     3901 ccgatgcgaa ggtagccatt ttctggcata tcccgtggcc gaacccggaa gcgtacggca
     3961 tctgcccgtg gcaccaggag atcctccagg ggatgctcgg cgcggacatc atcgggttcc
     4021 acatccagtt ccactgcaac aacttcctgg agaccgtcga ccggttcctc gaatcgaaga
     4081 tcgactggga gcacttctcg gtcacccggg gggggcacgc gacgctgatc aaaccgtttc
     4141 ccatcagcgt cgacttcgaa cttccttcag gggcgcccgt ttcggaaaca tggcccgcga
     4201 aggaggatct tctccggatg ctcggtatcg aggtggaata tctcggggtg ggggtcgacc
     4261 ggatcgacta cacgaaaggg atccccgaac ggtttcgggc catcgagcgt ttcttcgaaa
     4321 agttcccgga atacctgggg cggttcacct tcgtggagat gggggccccg agccgcaccc
     4381 acatcaagaa gtatcgcgac ctgatggtgg agatcgagga ggcggtggag aagatcaact
     4441 ggcgcttcca gacgaaaacg tggaggccga tcgtcttcct gaaggcgcac cacacccacg
     4501 aggcgatcgc gccgtattac agggcgtccg acctctgcat ggtcacgtcc ctgcacgacg
     4561 ggatgaacct ggtcgccaag gaattcgtcg ccgcccggga cgacgaggac ggggtgctga
     4621 tcctgagcca gttcacgggg gcttcccgcg aactgaagga cgccgtcatc gtcaacccgt
     4681 acgacatcga gcagatggca gacgccatcc gcctttcgct cgggatgccg cccgcggaac
     4741 ggcgcgacag gatggggcgg atgcgggaaa ccctgctgga atacaacatc taccggtggg
     4801 cggggaaact gatcgcggag cttgcgcgtc tgagattgac ggatggaacc tccgcgcagg
     4861 aggcagcgca gtgaactacg ttccgggcaa ccggtccctc tgggtgttcg acttcgacgg
     4921 aaccctttcc cccatcgttc ccgaccggac cggcgcacgc cttcaccggg aatgcgaacg
     4981 gatgctccgg tttctcgcac ggagtccctg gaaccgggtc gcggtcctgt ccaaccggac
     5041 gctcgacgac atcgtttcga ggctgccggt tcccggggtg ttcgtcggcg gggccagcgg
     5101 tctggagtgg cggcttccgg gagggcgccg gatcggaccg ggttccgcgt ccgaggcgct
     5161 cctggcggcg aaacgccagg ccgttttccc cctcctgaaa gaaatggcct ccctccccgg
     5221 cgtggagatc gaggataagc ggtggtccgt cgcggtacac taccggaatg cccctccgcg
     5281 ctcgttccgc aggagagtgt cccttctcca tcgcttgaga aaccggaag
//
LOCUS       DATGYW010000679         3605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_207661, whole genome shotgun sequence.
ACCESSION   DATGYW010000679 DATGYW010000000
VERSION     DATGYW010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3605
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207661"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..906)
                     /locus_tag="VK429_09555"
     CDS             complement(<1..906)
                     /locus_tag="VK429_09555"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012873893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HLN92084.1"
                     /translation="MDLIPTRDEILRGDTTDIYFRRTMEVLRATGKDRVRVTAEAIAK
                     KFPAGYGYAVLSGLDEMLSLLAGVDVDVEAMEEGTLFFPFESVFSIEGPYGAFCELET
                     AMLGTICQASGIATAASRVKHAAGEKPVLSFGARRMHPALSTLIDRNAFIGGADGVSV
                     IRSAAFLGETPQGTMPHALVLVLGDTVTAMRAFDAAVDPAVPRVCLVDTLQDEKFEAV
                     RVAEALRERLSAVRLDTPGSRRGDFRRILQEVRWELDLRGFRHVRLIASGGLGEEEVR
                     TLRDVADGFGVGTSLSNAPTIDFALD"
     gene            complement(930..1499)
                     /locus_tag="VK429_09560"
     CDS             complement(930..1499)
                     /locus_tag="VK429_09560"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020677068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HLN92085.1"
                     /translation="MKTGASGKKALVVVDMLNDFVRPGAPLEVPENRAILPALRRRIA
                     KARREGELVVYLCDSHRKEDPEFTRMGWPPHAVEGTPGAGVVASIAPEPGDVVVEKRT
                     YSGFYGTTLHFILRRHGIRFLTLAGCVTNICILFISAEATIRGYDVTVDERYVAGLSR
                     KDHAFALDQMEKVFGVRVLRRPGRKAPRR"
     gene            complement(1585..3003)
                     /gene="gatB"
                     /locus_tag="VK429_09565"
     CDS             complement(1585..3003)
                     /gene="gatB"
                     /locus_tag="VK429_09565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013257673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HLN92086.1"
                     /translation="MAFETVIGLEVHAQLSTRSKIFCACSTAFGAAPNENTCPVCTGM
                     PGVLPVLNRKAVEFTIRTALATSCAVQRRSVFARKNYFYPDLPKAYQISQYELPIALG
                     GHIDIEVGGETKRIGITRIHMEEDAGKLVHEGEFAGAQASLADLNRCSVPLMEIVSEP
                     DMRTPEEGGAYLRRLHDILVYLGVCDGNMEEGSFRCDANVSVRPVGQAAFGTKAELKN
                     MNSFRNVEKALEYEIRRQVELIEDGGKVEQETRLWDANAGVTVSMRRKEEAHDYRYFP
                     DPDLLPLIVDDSWVEELRGTIPEMPAEKIARLGRQYGIPRYDAGILASTRALADFFEA
                     SAAIYGGNPKTTANECVHWKDAVLAGTLSPETIAHAVEDRERGTISATASKKLVELVL
                     SSGKPFRTLRDERGLTQVSDTSALDLLVDKVLAASPKEVEGYRAGKVGLLSFFVGQVM
                     KESRGKANPKVVQEVLKKKLGP"
     gene            complement(3010..>3605)
                     /locus_tag="VK429_09570"
     CDS             complement(3010..>3605)
                     /locus_tag="VK429_09570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004514199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HLN92087.1"
                     /translation="GAVVVDVSLPHTEYALSTYYLIAPAEASSNLARYDGVRYGYRAG
                     GASGLIEMMSRTRAEGFGDEVKRRVMIGTYALSAGYYDAYYGKAQKVRTLIRDDFTKA
                     FEVADVLLTPTTPTPAFRLGEKTGDPLTMYLSDIYTIPCNLAGIPGISVPCGFSAEGL
                     PIGAQLLSKSFREETLFTAAGAVERVLPLRRMAPLEG"
BASE COUNT          570 a         1292 c         1147 g          596 t
ORIGIN      
        1 gtcgagagcg aagtcgatcg tgggggcgtt gctcagggag gtcccgacgc cgaagccgtc
       61 ggccacgtcg cgaagcgtcc gcacttcctc ctcacccagc cctccggagg cgatcagccg
      121 cacgtgccgg aaaccgcgca gatccagctc ccaccgcacc tcctggagga tccgccggaa
      181 atcgccccgg cgcgacccgg gcgtgtcgag ccgaacggcg gacaatcgtt cccgcaacgc
      241 ctcggcgacc cgaaccgcct cgaacttctc gtcctgaagc gtgtcgacga gacagacccg
      301 cgggaccgcc ggatccaccg ccgcgtcgaa ggcgcgcatc gccgtcaccg tgtctccgag
      361 gaccaaaacg agggcgtgcg gcatcgtccc ctgcggcgtt tccccgagga acgcggcgct
      421 ccggatcacg gagacgccgt ccgcgccgcc gatgaaggcg ttccggtcga tcagcgtcga
      481 gagggcgggg tgcatcctgc gggccccgaa gctcaggacc ggcttctccc cggcggcgtg
      541 cttgacccgc gacgccgccg tcgcgatccc ggacgcctgg cagatcgtcc ccagcatcgc
      601 cgtctccagc tcgcagaagg cgccgtacgg cccctcgatg gagaagacgg actcgaaggg
      661 gaaaaagagg gtcccttcct ccatcgcctc cacgtcgaca tcgaccccgg cgagcagcga
      721 cagcatctcg tccagccccg aaaggacggc gtacccgtag ccggcgggga acttcttggc
      781 gatcgcctcg gcggtcactc gcacacggtc cttcccggtc gcgcgcagca cctccatcgt
      841 ccggcggaaa tagatgtcgg tcgtatcccc gcggaggatc tcgtcgcggg tcgggatgag
      901 atccatcgga gcctccttga cgggggggat caacggcggg gggcctttct ccccgggcga
      961 cgcagcaccc ggactccaaa caccttttcc atctggtcaa gggcgaaggc gtggtctttc
     1021 cgcgacagcc ccgccacgta ccgctcgtcc accgtcacgt cgtacccgcg aatcgtggct
     1081 tcggccgaga tgaacaggat gcagatgttc gtgacgcagc cggcgagcgt caggaatcgg
     1141 atcccgtgtc gccggaggat gaagtgaagg gtcgtgccat agaacccgga gtaggtgcgc
     1201 ttctccacca ccacgtcccc cggctccggt gcgatggagg cgacaacccc cgcgccgggg
     1261 gtcccctcca cggcgtgcgg cggccacccc atccgcgtga attcggggtc ctccttccgg
     1321 tgggagtcgc ataggtacac gacgagctcc ccctcccgcc gcgccttcgc gatccggcgg
     1381 cgcagcgccg ggagaatcgc gcggttctcc ggcacctcca ggggggcgcc gggacggacg
     1441 aagtcgttca acatgtcgac gacgaccagc gccttctttc ccgacgcccc ggtcttcacc
     1501 gcttcctccc ctggtgcagc gtctcacaaa taccccgtgg ttccccgccg acggcggaca
     1561 cggtccttat tttcatcata ccattcaagg gccgagcttc ttcttcagca cctcctggac
     1621 caccttcggg tttgccttcc cccggctctc cttcatcacc tgcccgacga aaaaggagag
     1681 gagcccgacc ttcccggccc ggtacccctc gacctctttc gggctcgccg cgaggacctt
     1741 gtcgacgaga agatccagcg cggaggtgtc ggatacctgg gtcagacccc gctcgtcccg
     1801 aagcgtccgg aacggcttcc cgctcgacag gacgagctcc acgagcttct tggaggcggt
     1861 ggcggaaatc gtcccccgct cccgatcctc gaccgcgtgg gcgatcgtct ccggggagag
     1921 cgttcccgcg aggacggcgt ccttccaatg gacgcattcg ttcgccgtcg tcttcgggtt
     1981 cccgccgtag atcgccgcgg acgcctcgaa gaaatccgcc agcgcccggg tcgacgcgag
     2041 gatccccgcg tcgtagcgcg ggatcccgta ctgccgcccg agccgcgcga tcttctccgc
     2101 cggcatctcc gggatcgtcc cgcgcagctc ctcgacccag gaatcgtcca cgatcagcgg
     2161 gagcaggtcc gggtcgggga agtaccggta gtcgtgcgcc tcctccttcc ggcgcatcga
     2221 cacggtgacg cccgcgttcg cgtcccaaag ccgcgtctcc tgctccacct tccccccgtc
     2281 ctcgatcagc tcgacctgcc gccggatttc atactcgagc gccttctcga cgttgcggaa
     2341 ggagttcatg tttttcagct cggccttcgt gccgaacgcc gcctgtccga ccgggcggac
     2401 cgagacgttc gcgtcgcacc ggaacgatcc ctcctccatg ttcccgtcgc acaccccgag
     2461 gtagacgagg atgtcgtgca ggcgccgcag gtaggcgccc ccctcctccg gcgtgcgcat
     2521 gtcgggctcg gagacgatct ccatcagggg gacggagcat cggttgagat ccgcgagcga
     2581 tgcctgcgct ccggcgaact ccccttcgtg gacgagcttt cccgcatcct cctccatgtg
     2641 gatccgcgtg atcccgatcc gcttcgtctc cccgccgacc tcgatgtcga tgtggccgcc
     2701 gagggcgatc ggcaactcgt attgggagat ctggtacgcc ttggggaggt ccgggtagaa
     2761 gtagttcttc cgggcgaaga cgctcctgcg ctgcaccgcg cacgaggtgg cgagcgccgt
     2821 ccggatcgtg aattccaccg ccttgcggtt gagcaccggg agcacgcccg gcatgccggt
     2881 gcacacgggg caggtgtttt cgttgggggc ggctccgaac gccgtggagc aggcgcagaa
     2941 gatcttgctc cgcgtggaga gctgggcgtg gacctccagg ccgatgaccg tctcgaacgc
     3001 catcgttcct tatccctcca gcggcgccat gcgccgcagc ggaaggacgc gctcgaccgc
     3061 cccggcggcg gtgaacagcg tctcttcccg gaaggatttc gagagaagct gcgccccgat
     3121 ggggagtccc tccgcggaaa aaccgcacgg cacggagatc cccggaatgc cggccaggtt
     3181 gcacgggatc gtgtagatgt cggacaggta catcgtgagc ggatcgcccg tcttctcccc
     3241 gaggcggaac gccggcgtcg gggtggtggg agtgaggagc acgtccgcca cctcgaacgc
     3301 ctttgtgaaa tcgtcccgga tcagggtgcg gaccttctgc gccttcccgt aataggcgtc
     3361 gtagtagccc gcggagagcg cgtaggtgcc gatcatgacg cggcgcttca cctcgtcgcc
     3421 gaacccctcc gcccgcgtcc tcgacatcat ctcgatcagg cccgaggccc cgcccgccct
     3481 gtagccgtac cggacgccgt cgtacctcgc gaggttggac gacgcctccg cgggggcgat
     3541 gagatagtac gtggagaggg cgtattccgt gtgaggcagc gagacatcca ccacgacggc
     3601 gccct
//
LOCUS       DATGYW010000680         1880 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_207825, whole genome shotgun sequence.
ACCESSION   DATGYW010000680 DATGYW010000000
VERSION     DATGYW010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1880
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207825"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1823)
                     /gene="topA"
                     /locus_tag="VK429_09575"
     CDS             complement(<1..1823)
                     /gene="topA"
                     /locus_tag="VK429_09575"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HLN92088.1"
                     /translation="MGITGKNDRKKRPVTCPSFLSLLDERIFTGVRTGRKPLQAIGNF
                     GVIISISIPGYGRPVGQHDGLRSRSGEQTLITRGNMAIPLLIVESPTKARTLSAFLGN
                     RYRVMASVGHVRDLPNNASEVPEAIKGKEWGSMAVDVDHDFQPHYVISSDRRGTIRDM
                     KSALKDASEVLLATDPDREGESISWHLLELLKPKVPVRRIVFHEITKEAVLSAIEHSR
                     ALDRNLVDAQESRRILDRLFGYKVSPVLWKWIAAKLSAGRVQSVAVRLVVEREEERKA
                     FRKAGFWNLEATLSGAGREFTATLVRVDGKRVAVGKDFDAATGKPGNGTVRVLDGASS
                     AALAETLRGSIPWEVTGVEEKPVTQHPAPPFTTSTLQQEANRKLGFSADRTMSAAQKL
                     FDSGVISYHRTDSTTLSDKALQESARTIRGMYGDAYYGGARRYQKKVKNAQEAHEAIR
                     PTDFSLAPDKTGGRFHGDEARVYELIWKRAVASQMADAKLLRTTVEITAAGEGGAPCV
                     FTASGKVIQFPGYLRAYVEGSDDPAADLGDKETLLPACRVGDRVSLPGGGAALSLLDL
                     SPKSHETTPPPRYTDASLVKRLEDDGIGRPSTYASIIKTIL"
BASE COUNT          347 a          607 c          527 g          399 t
ORIGIN      
        1 tccaggatgg tcttgatgat cgatgcgtag gtggacggcc gcccgatgcc atcatcctcc
       61 agccgcttga cgagcgatgc gtcggtgtac cggggaggag gagtcgtctc gtgcgatttc
      121 ggtgaaaggt caagcaacga cagcgccgca ccgccgcccg gcagggatac acggtccccc
      181 accctgcagg ccggaagcaa cgtctccttg tcccccaggt cggccgccgg atcgtcgctc
      241 ccctccacgt aggcgcgaag gtatcccggg aattgaatga ccttgccgga agcggtgaat
      301 acgcaggggg cgccgccctc tccggccgcc gtgatttcga cggttgtgcg cagcagcttc
      361 gcgtcggcca tctgggacgc caccgcccgc ttccagatca gttcgtacac cctggcttcg
      421 tccccatgaa agcgacctcc ggtcttgtcg ggagccaaag agaagtccgt cggccgaatc
      481 gcctcgtgcg cttcctgcgc gttcttgacc tttttctgat agcgtcgcgc accgccgtaa
      541 tacgcgtccc catacatccc acggatcgtg cgagccgact cctgcagtgc cttgtccgac
      601 aaggtcgtcg agtcggtccg gtgataggaa atcacgccgg aatcgaacag tttctgcgcc
      661 gccgacatcg tcctgtcggc ggagaacccg agtttccggt tggcttcctg ctgcagtgtc
      721 gaggtggtga acggcggggc cgggtgttgc gtcacgggct tttcctccac ccccgtgacc
      781 tcccagggga tcgagcctcg caacgtttcc gccagcgccg cggaactcgc cccgtcgagc
      841 accctcacgg tgccgttccc aggcttcccc gtggcggcat cgaaatcctt accgacagcg
      901 acacgcttcc catccacccg aacgagcgtt gccgtgaact cccggcctgc cccgctcagc
      961 gttgcctcaa ggttccagaa tccggctttc cggaaggctt tccgttcctc ctcccgctcg
     1021 acaaccaatc gcaccgcgac gctctgcacg cgacccgcac tcagttttgc cgcaatccat
     1081 ttccaaagga ccggcgacac cttgtatccg aagagacgat ccaggattcg ccggctttcc
     1141 tgcgcatcca ccaggttgcg atcgagtgcg cgggaatgtt cgatcgcact gagaacagct
     1201 tctttcgtga tctcatggaa tacgatgcgg cgaaccggca ccttcggctt caacagttcg
     1261 aggagatgcc aactgatgga ctcaccctcc cggtccggat cggtcgcaag gagaacttcc
     1321 gacgcgtcct tgagggctga cttcatgtca cggatggtcc ccctacggtc cgatgaaatg
     1381 acgtaatgcg gctggaaatc gtgatcaacg tccaccgcca tcgaccccca ttccttgcct
     1441 ttgatcgctt ccggcacctc actggcgtta ttcggaaggt cgcgaacgtg gccgacgctt
     1501 gccatgacgc gatacctgtt tcccaggaag gcggataggg tgcgggcctt cgtgggggac
     1561 tcgacgatca gtagtgggat ggccatattt cctcgggtta tcaaagtttg ctcgcctgat
     1621 cgcgagcgca atccatcatg ctgcccaact ggtctaccat atcccggaat agaaatcgaa
     1681 attatcaccc cgaaattgcc gattgcttgc aggggtttgc ggcccgtacg gactccggtg
     1741 aaaatcctct cgtccaggag gctcaaaaag gagggacagg tcactggccg ttttttacga
     1801 tcgttttttc ctgtgatacc caacgcagat tttccatctt gatggtttgc tcgatgtatt
     1861 caaagatcga atccacaggt
//
LOCUS       DATGYW010000681         2489 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_52603, whole genome shotgun sequence.
ACCESSION   DATGYW010000681 DATGYW010000000
VERSION     DATGYW010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52603"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..684
                     /locus_tag="VK429_09580"
     CDS             <1..684
                     /locus_tag="VK429_09580"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HLN92089.1"
                     /translation="STSPGKLAQILFYGAALKRIPGSREDTAKAALAAAETTYYASHS
                     WNPFFFQGTKTFAYEVWEQMGFRAPDAILLPAGNGTLLIGSFIGFRDLKEAGWIDRIP
                     RHIAVQAANCAPLLQMFRDGLDVVPPVESRETIAEGVAIAAPVRGKEIVDIVRRTGGQ
                     VVAVDDGEVRNALLLLGRKGLYVEPTSALPVAAYLKYPALRSGVMVAPLTGHGLKANE
                     KMLKIASIG"
     gene            724..1671
                     /locus_tag="VK429_09585"
     CDS             724..1671
                     /locus_tag="VK429_09585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015248958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HLN92090.1"
                     /translation="MRKRKLGDSGLEVSVLALGGNVFGWTADEASSFRVLDAFTAAGG
                     NLIDTADVYSTWAPGNRGGESETLIGRWMKARRNREDIVLATKVGKEMGPGRKGLSRA
                     YILRAAEESLRRLQTDRIDLYQAHEDDPGTPLEETMEAFVELVRQGKVRAVGASNYSA
                     GRLSDALRIGERQGGLRYQSLQPCYNLYDRSDYETSLEPLCRKERLGVITYYSLASGF
                     LTGKYRSEEDLSKSVRGETVRKYMNERGFRILDALDETARRHGSNPARVALAWLIARP
                     GVTAPIASASTPEQLDDLVEATKLELDDSSIERLNRASD"
     gene            1829..2107
                     /locus_tag="VK429_09590"
     CDS             1829..2107
                     /locus_tag="VK429_09590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013720369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HgcAB-associated protein"
                     /protein_id="HLN92091.1"
                     /translation="MKRQEKGGSCCATPSFGGCKVESLVTVDERGQMVLPKELRDKAG
                     IRGGDKMAVIGWEKEGKVCCLSLIRVEELSTMVKGVLGPLMGDLLLKG"
     gene            2225..2489
                     /locus_tag="VK429_09595"
                     /pseudo
     CDS             2225..2489
                     /locus_tag="VK429_09595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_264175408.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mercury methylation corrinoid protein HgcA"
BASE COUNT          453 a          713 c          914 g          409 t
ORIGIN      
        1 agcacctccc cggggaagct ggcccagatc cttttctacg gcgcggcgct gaagcggatc
       61 ccggggagcc gggaggacac cgcaaaagcc gcactggcgg ccgcggaaac gacgtactac
      121 gcgagccact cctggaaccc cttcttcttc caggggacga agaccttcgc gtacgaggtg
      181 tgggagcaga tgggtttccg ggcgccggac gcgattctgc ttccggccgg gaacgggacg
      241 ctgctgatcg gttccttcat cgggttccgc gacttgaagg aagcgggctg gatcgaccgc
      301 atcccgaggc acattgccgt gcaggcggcg aattgcgccc ccctcctgca gatgttccgg
      361 gacggcctcg acgttgtccc cccggtggag agccgtgaga cgatcgcgga gggtgtggcg
      421 atcgccgctc cggtgcgggg aaaggagatc gtcgacatcg tccggcggac cggaggccag
      481 gtggttgccg tggacgatgg ggaggtgagg aatgcactgc tcctgctggg ccgcaagggg
      541 ctttacgtgg agccgacatc cgccctgccg gtagcggcgt atttgaagta ccccgcgctc
      601 cggagcggcg tcatggtggc tccgctcacg gggcatggcc tcaaggccaa cgaaaagatg
      661 ctgaagatcg catcgatcgg gtgacccgcg gaccttgcca ggccgccggg gagggagggg
      721 aagatgcgga agaggaaact cggcgattcc gggttggagg tttccgtgct cgccctcggc
      781 ggaaacgtct tcggctggac cgccgacgag gcgtcgtcgt tccgggtgct cgacgctttt
      841 acagccgcgg gcgggaacct gatcgacacc gcggacgtgt attcgacctg ggctcccggc
      901 aaccggggcg gggaatccga gaccctcatc ggccgatgga tgaaggcgcg gaggaaccgg
      961 gaggatatcg ttctcgcgac gaaggtgggg aaggagatgg gtcccggcag gaaagggctt
     1021 tccagggcct atatcctgcg cgccgcggaa gaatccctgc gccgtttgca gaccgatcgg
     1081 atcgacctgt accaggccca cgaagacgac ccgggaacgc ccctggagga aaccatggaa
     1141 gcgttcgtgg agttggtgcg ccaggggaag gttcgggccg tcggggcttc gaactacagt
     1201 gcggggaggc tttccgatgc gcttcgcatc ggcgaacgcc aggggggcct gaggtaccag
     1261 agcctgcaac cgtgctacaa cctgtacgac cgttccgact atgaaacgtc cctggagccc
     1321 ctctgccgaa aagagcgact gggggtcatc acctactact ccctggccag cggtttcctt
     1381 acgggcaagt accggtcgga agaagatttg tcgaagagcg tccgggggga aacggtcagg
     1441 aaatatatga acgagcgggg attccggatc ctcgacgccc tggacgagac cgcccggcgg
     1501 cacgggtcga accccgcccg cgtcgccctt gcctggctga ttgcgcgccc cggtgttacg
     1561 gcgccgattg ccagcgcctc gaccccggaa caactggacg atcttgtcga ggccacgaaa
     1621 ctggaactgg acgactcctc gatcgagcgg ttgaaccgcg ccagcgattg attgctggtt
     1681 tcatcggata gcggggacgg gcccgcagca cgtttcgggg gtgagaatgc cctcttgaca
     1741 gccggatgtc cgatcggtga agatatcagc gtaaactgat tttactgatt gatacgaata
     1801 tcgtgatggc gcagggagag gtgcgacgat gaagaggcag gagaagggcg ggtcgtgctg
     1861 cgcgacgccg tcgttcggcg gctgcaaggt cgagtcgctg gtgacggtgg atgaacgggg
     1921 acagatggtc ctccccaagg agctgcgcga caaggcgggg atcaggggcg gcgacaagat
     1981 ggcggtgatc ggctgggaaa aagaggggaa ggtgtgctgc ctctcgctga tccgggtgga
     2041 ggaactcagc acgatggtaa agggagtgct cggtcccctg atgggggacc tgctcctgaa
     2101 agggtgacag ggggaagtgg ggatgggcga ggagaaggcg gggtgttgcg cgcctccaag
     2161 cgggaaggcg tcgccgtgct gcggcggcgg gtcgtcgtct ggggccccaa tccgctacga
     2221 ggacaccttt gtggaaggaa cggtggagac cccggctgga ccggtccccc gcgtccattc
     2281 gcgggtcggg agtcgagacc tcctgggccg gtggaaggtg cgatggggaa tcggcaggga
     2341 ccgctaccgc gtcgccccgg ggctgtacgg gctgggggct cctgatgcgg ccgctcccgt
     2401 tctggtcacc gccaactaca aaatgacctt cgacgccgtg cgccgcgatg cggcggggct
     2461 ggacgcatgg ctcctcgtcc tcgacaccc
//
LOCUS       DATGYW010000682         2321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_265222, whole genome shotgun sequence.
ACCESSION   DATGYW010000682 DATGYW010000000
VERSION     DATGYW010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265222"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1022)
                     /locus_tag="VK429_09600"
     CDS             complement(<1..1022)
                     /locus_tag="VK429_09600"
                     /inference="COORDINATES: protein motif:HMM:NF028500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HLN92092.1"
                     /translation="MNRPPTVHPIQYVKGVGPRLGEKLAARGIRTPHDALYFFPKDYE
                     DRRKVIPIRELKPGMTVPVRGKILSVQGGGKMFRPTKVLEVVITDGTGRLSAKWFRFH
                     PSLAERFRVGESVTLCGSARWFRFFPEMHHPEILAEEDAADPVHSGRIVPVYPEVEGI
                     PPRVLRKIQWEVVQRHASQEIEYFPSGILARVGIPPLQESLAAIHFPRDDADAERFRQ
                     FSSPQQRRLIFGELFALQWALVIRRAGMDREEAIPLPWDRGIVDEIKRRLPFDLTGAQ
                     RRVVNEILKDLGKPHPMHRLLQGDVGSGKTIVAWIAAMVAWRHGVQAAVMAPTEILAE
                     QHYRRF"
     gene            1983..2297
                     /locus_tag="VK429_09605"
     CDS             1983..2297
                     /locus_tag="VK429_09605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92093.1"
                     /translation="MKIIIAVLFIGLLLSVSSGVYQSPITFFSGFDSTTPANVVDEAI
                     TYCGSAAECLVAIYHDFMASSTIMYVFNHYLPPDQNSGRIMLIGFGLVGLAGYGRRLF
                     KK"
BASE COUNT          487 a          671 c          657 g          506 t
ORIGIN      
        1 atgaacctcc gataatgctg ctccgccagg atctcggtgg gcgccatcac ggcggcctgc
       61 acgccgtgcc gccaggcgac catcgcggcg atccaggcga cgatcgtctt cccgctgccc
      121 acatccccct gcagcaggcg gtgcatcggg tgcggcttcc cgaggtcttt caggatttcg
      181 ttgaccaccc gacgttgggc gccggtcagg tcgaacggaa gccgtcgctt gatctcgtcg
      241 acgatcccgc ggtcccacgg gagcggaatc gcctcctccc gatccatccc cgcccgacgg
      301 ataaccagcg cccattggag agcgaacagt tcaccgaaga tcaggcgccg ttgctggggg
      361 gaggagaatt gccggaagcg ctccgcgtcc gcgtcgtcgc gcgggaagtg gatggcggcg
      421 agcgactcct gcagcggcgg gatcccgacc cgcgcgagga tgccggacgg gaagtattcg
      481 atctcctgcg aggcgtgccg ctggaccacc tcccactgga tcttgcggag aacccgcggg
      541 gggatccctt ccacctccgg gtagacgggg acgatgcggc cggaatggac cgggtcggca
      601 gcgtcttcct ctgcgaggat ctccgggtgg tgcatttcgg gaaagaagcg gaaccatcgc
      661 gcggatccgc agagcgtcac cgactccccg acgcggaacc gttcagcgag ggagggatgg
      721 aagcggaacc attttgccga aagtctcccg gtcccgtcgg tgatcacgac ctcgagaacc
      781 tttgtcgggc ggaacatttt ccccccgccc tgcacggaaa ggatcttccc gcgcacgggt
      841 acggtcatcc ccggcttgag ttcccggatg gggatcacct tgcgccggtc ttcgtaatcc
      901 ttcggaaaaa agtagagggc gtcgtgcggg gtccggatcc cccgggcggc aagcttttct
      961 cccaggcggg gccccacacc cttgacgtac tggatggggt gaactgttgg agggcgattc
     1021 actccgtcag aaccctctga catcaacggc ttgcgtaaaa ttggaacgca tcctcattta
     1081 tcctggcctc atgagtagga aggcgtctca ttttttgcac cttttcttcg tcgtgtcgct
     1141 ttccaagtat atctgaccgt cactattttc tccgggaatg aaacttcctc aggggacctg
     1201 aaccttattt ttcagggcga acaactcttt tcgaatcgac tccctggaag ggagggaaag
     1261 ataatggaga catataaaaa aatggcgtgg gtttggggag cgcttctggt gtatgcgatc
     1321 ggcatcagtt tatgaatcgc gtagataggt atctgaccac gttatacggt ctcctggcgg
     1381 gtgcagagaa tcatagcccc cggaaataga atccgggggc tttttaaatg atccggatga
     1441 caaaccctac gagatcggta gatacaaggg cgcgccgatc cgcggacatc atggagcaat
     1501 accggcgtga attttgaaac ggagattgat tcacggcccc gaaaaggtca taatcaaatc
     1561 gtgggcggta tagccgccca cccccgcgct gtggcgacca ggaattacgt cctgaccacc
     1621 gccaaggcgc tcgaaacagg cgctgcgtca ggccgaatcc gattttacgg ccgctgactc
     1681 ggcgcctctc tcttgctggg tttcccctgt agcgaaggat cgccacctct accccgtcct
     1741 ttgagtcggg aaggaatccc gcctcccgca tctccgaagc gacccggcct tgtaggctga
     1801 ggcgggggca tattgcctcc caaacaggca aaatttttcc caacaaggaa cctcctttcc
     1861 actgaacatg attcctggca tattaatgtc tttaatatca gtatattgca acaataaaaa
     1921 ccaacggcct taaatttgct tgattatcta aaacgttaca taccggaccg ttggagcata
     1981 ccttgaaaat aataattgct gttctcttta tcggtctttt actcagcgtt tccagcgggg
     2041 tttatcaatc acccattacc tttttctccg gctttgactc aaccacgccc gcgaacgttg
     2101 tggatgaggc aatcacttac tgcgggagcg ctgccgaatg ccttgtcgca atttatcacg
     2161 actttatggc atccagtacg atcatgtacg ttttcaatca ctacctcccg cctgaccaga
     2221 actccggcag gataatgcta atcggttttg ggttggtggg actggcgggg tacggcagga
     2281 ggctgttcaa gaagtagaca tccaattcat ggaggatcgg a
//
LOCUS       DATGYW010000683         2230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_365622, whole genome shotgun sequence.
ACCESSION   DATGYW010000683 DATGYW010000000
VERSION     DATGYW010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_365622"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..831
                     /locus_tag="VK429_09610"
     CDS             <1..831
                     /locus_tag="VK429_09610"
                     /inference="COORDINATES: protein motif:HMM:NF044477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HLN92094.1"
                     /translation="KAGNLRRLMEELSGMSLKARMERFGLREDRADVILPACFVYHRI
                     AELNGSEEILVPRVSLKDGVVQEILEQAKGTEHLLDLREQVCVSCREMVARYKLDPRH
                     SEKVAELALSLFDQTESLHGLGKQERIYLEAAAFLHDVGYFISMQKHHKHSHYIIANS
                     EIVGLSPAERLIVAGVSRYHRKATPGPAHPEYEELPKKDRATVWSLAALLRIADALDK
                     EHNAAVRAVECRLQDGALLLRAVSRKSCRLEALGVTANAAMFRDHFGVDVLLTIDREE
                     "
     gene            836..1534
                     /gene="tmk"
                     /locus_tag="VK429_09615"
     CDS             836..1534
                     /gene="tmk"
                     /locus_tag="VK429_09615"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013780989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HLN92095.1"
                     /translation="MPEKGLSNAVPGKLIAVEGLDGSGKSTQVYLLKRWLELSGYKVF
                     FTEWNSSDIVRSATRRGKKQNLLTPTTFSLIHCTDFADRYERNILPMLKAGFIVLADR
                     YKFTALARDSVRGCPQEWVEQLYSFAVHPDITFYFSLPLRTALDRILAGRPALKYHEA
                     GMDLGLSPDPVESFKIFQGRIHKAYEALARRHRFTRIRSDRPVEEIQEEVRGILRDRI
                     DLAQYKAALPRGWR"
     gene            1531..2229
                     /locus_tag="VK429_09620"
     CDS             1531..2229
                     /locus_tag="VK429_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007416989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate kinase"
                     /protein_id="HLN92096.1"
                     /translation="MNLPRTFYGKGIPGVATGDLHGKLIVLEGPDGSGRSTQIALLTE
                     WLERRGHAVEHVGLKRSNLVAEELAEAKRGNVLSPRTLSLFYATDFADQLEHRILPAL
                     RAGFVVLADRYVYTLMARDMVRGADLPWLQSVYSIALVPDLVMYLRVTPQKLMERYIY
                     RGRELDYWESGMDIGYSRSWYDSFIRYQSELHRTFNRLQAVYGFVTVNGMRVPRAVTR
                     DLQTHIESVISPNG"
BASE COUNT          375 a          743 c          769 g          343 t
ORIGIN      
        1 aaggccggga acctccgtcg gctgatggag gagctgtccg ggatgtcgct gaaggcccgg
       61 atggagcggt tcggactgcg ggaagatcgg gccgacgtca tcctccccgc ctgcttcgtc
      121 taccaccgca tcgcggagct gaacggttcc gaggagatcc tcgtcccccg ggtgagcctg
      181 aaggacggcg tggtccagga gatcctcgag caggcgaagg ggacggagca cctcctggac
      241 ctccgggagc aggtgtgcgt atcgtgccgg gagatggtcg cacggtacaa gctggacccg
      301 agacactcgg agaaggtcgc ggagctcgcc ctgagcctct tcgaccagac ggaatccctg
      361 cacgggcttg gaaagcagga gcggatctac ctcgaggcgg cggcgttcct gcacgacgtc
      421 gggtacttca tcagcatgca gaagcaccac aagcacagcc actacatcat cgccaactcc
      481 gagatcgtgg gcctttcccc ggcggagcgg ctcatcgtcg cgggggtttc gcgctaccac
      541 cggaaggcca ccccgggccc ggcccacccg gagtacgagg agcttcccaa gaaggaccgg
      601 gccaccgtgt ggtccctcgc cgccctcctg cggatcgccg acgccctgga caaggagcac
      661 aacgcggccg tgcgggccgt cgaatgccgc ctccaggacg gggcgctgct cctgcgggcg
      721 gtgagccgga agtcgtgccg cctggaggcg ctgggcgtga ccgccaacgc ggcgatgttc
      781 cgcgaccatt tcggcgtgga cgtgctgctg accatcgacc gggaggagtg accggatgcc
      841 ggagaagggc ctttcgaacg ccgtaccggg gaagctgatc gccgtcgagg ggctcgacgg
      901 atcggggaag tcgacccagg tctacctgct caagcggtgg ctggagctgt ccggctacaa
      961 ggtcttcttc accgagtgga actcctccga catcgtccgg agcgccaccc ggcgcgggaa
     1021 gaagcagaac ctgctcaccc cgaccacctt ctccctcatc cactgcaccg acttcgcgga
     1081 ccggtacgag cggaacatcc tgccgatgct caaggcgggg ttcatcgtgc tcgcggaccg
     1141 gtacaagttc accgccctgg cccgggactc cgtgcggggg tgtccgcagg agtgggtcga
     1201 gcagctgtac agcttcgcgg tccacccgga catcacgttt tacttctccc tcccgctgcg
     1261 gacggcgctg gaccggatcc tcgccgggag accggcgctg aagtaccacg aggcggggat
     1321 ggacctgggc ctctccccgg acccggtgga gagcttcaag attttccagg ggaggatcca
     1381 caaggcgtac gaggccctcg cccgccggca ccggttcacc cggatccggt ccgaccggcc
     1441 cgtggaggag atccaggagg aggtccgggg gatcctgcgc gaccggatcg acctcgcgca
     1501 gtacaaggcg gcgctcccga gggggtggcg atgaaccttc caaggacgtt ctacggcaag
     1561 gggatccccg gggtcgccac gggggacctg cacgggaagc tcatcgtcct cgaggggccg
     1621 gacggatcgg ggcggagcac gcagatcgcc ctgctcaccg agtggctgga gcggcgcggg
     1681 cacgcggtcg agcacgtggg gctcaagcgc tccaacctgg tcgccgagga gctggcggag
     1741 gcgaagcggg ggaacgtcct ctccccgcgc accctgtccc tcttctacgc caccgacttc
     1801 gcggaccagc tggagcaccg gatcctcccg gccctgcggg cggggttcgt cgtcctcgcg
     1861 gaccggtacg tctacactct gatggcgcgg gacatggtgc ggggcgccga cctcccgtgg
     1921 ctgcagtcgg tgtacagcat cgccctcgtc cccgacctgg tgatgtacct ccgcgtgacg
     1981 ccccagaagc tcatggagcg gtacatctac cgcggtcgtg agctcgacta ctgggagtcg
     2041 gggatggaca tcgggtacag ccggtcgtgg tacgactcct tcatccggta ccagtccgag
     2101 ctgcatcgga ccttcaaccg gctccaagcc gtctacgggt tcgtcaccgt caacgggatg
     2161 agggtgccgc gggccgtcac gcgggacctg cagacccaca tcgagtccgt catctcgccg
     2221 aacggatagg
//
LOCUS       DATGYW010000684         1892 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_208434, whole genome shotgun sequence.
ACCESSION   DATGYW010000684 DATGYW010000000
VERSION     DATGYW010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208434"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..550)
                     /locus_tag="VK429_09625"
     CDS             complement(<1..550)
                     /locus_tag="VK429_09625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92097.1"
                     /translation="MLLHLIVFWLAYRFPSTVHRPEEVMEIDLSDIPRATDFLPAERG
                     ILEGRPPRPAPPPNGVKAPPALQWRVPDLPVKPDLPPEESFPVNARNASPAAEAKEEA
                     GPQGKKVEGIEAKAEPAPSSGTPQGGPGKSGAPGSAPSTSLRDLTPSLGRMVMAREEP
                     SGGRGQGAATGNAVGTGGKATGE"
     gene            614..1297
                     /locus_tag="VK429_09630"
     CDS             614..1297
                     /locus_tag="VK429_09630"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013821614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HLN92098.1"
                     /translation="MIPIRDTIPSSRVPVVTYLLIAVNLGLFFYEISLGESLPPFLER
                     YAVVPARLLGGGALSVRELLTPVTAMFLHGGWMHVLGNMLYLYIFGDNVEDTLGHGRY
                     LLFYIACGVASFAVQIGFQSVSTVPNIGASGAIAGVLGAYFLLFPRARVVTLLPLFVF
                     FTVVEIPAVVFLGLWFLLQFLSGAVSFGRAAATGGVAWWAHVGGFVAGVVFLKALSNR
                     GRGRVETTV"
     gene            1409..1693
                     /locus_tag="VK429_09635"
     CDS             1409..1693
                     /locus_tag="VK429_09635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015718556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HLN92099.1"
                     /translation="MTKAELVEAVREGAGIGKGQAEEAVAAFLGAVVKSLKKGEKLTL
                     TGFGTFSVSNRKARTGRNPQTGETIKIKAAKVPKFSAGKALKEAVGGKKK"
BASE COUNT          274 a          630 c          625 g          363 t
ORIGIN      
        1 cctcccccgt cgctttccct ccggtgccca ccgcgttccc cgtcgctgct ccttgcccgc
       61 ggcctcccga cggttcttcg cgcgccatca ccatcctgcc gagggacggt gtgaggtccc
      121 gcagcgacgt cgagggcgcg ctccccgggg caccgctttt cccgggaccg ccctgcggcg
      181 taccggagga aggcgccggc tcggccttcg cctcgatccc ctcgactttc tttccctgcg
      241 gccccgcctc ctccttcgcc tccgcggccg ggctcgcgtt ccgcgcattg acggggaacg
      301 actcctcggg cggcaggtcc ggcttcaccg ggaggtccgg gacgcgccat tgcagcgccg
      361 ggggcgcctt caccccgttc ggggggggcg cggggcgagg cggccgcccc tcgaggatgc
      421 cgcgctccgc cggcaggaag tccgtggcgc ggggaatgtc cgagaggtcg atctccatga
      481 cctcttccgg gcggtggacc gtggagggga accggtacgc cagccagaag acgatcaggt
      541 gcagcagcac ggaaacaacc gtgcaggcga ggaagagccg gcgtgatggc atagcgtata
      601 attatagcaa cctatgattc ccatacgtga cacgatcccc tcctcccgcg tcccggtcgt
      661 cacctacctg ctgatcgcgg tcaacctcgg tttatttttc tacgagattt ccctggggga
      721 gagtctccct ccgttcctcg agcggtacgc ggtggttccc gccagactcc tcggcggcgg
      781 cgccctttcc gtccgggaac tgctcacgcc ggtgacggcg atgtttctcc acggcgggtg
      841 gatgcacgtg ctggggaaca tgctctacct ctacattttc ggggacaacg tggaggacac
      901 cctcggtcac ggcaggtacc tcctgttcta catcgcgtgc ggcgtcgcgt ccttcgccgt
      961 gcagatcggc ttccagtcgg tatccacggt gcccaacata ggggcctccg gcgcgatcgc
     1021 cggcgtcctc ggcgcctact ttctcctctt cccgcgtgcc cgcgtggtga cgctcctgcc
     1081 gctgttcgtc ttcttcacgg tggtcgagat ccccgcggtc gtcttcctcg gcctgtggtt
     1141 cctgctgcag ttcctgagcg gcgccgtttc cttcggacgc gcggccgcga cgggcggcgt
     1201 cgcgtggtgg gcgcacgtcg gtgggttcgt cgcgggggtc gtcttcctga aagcgctctc
     1261 gaaccgggga cgggggaggg tggaaacaac cgtttagccc ttgacacgcc ggcgtctttc
     1321 gggattaatg aaaccaactt gcatcgcgtt ccatcggcgt ttttcccggt ttccgggatg
     1381 gtataaaaaa cttcaggagg ttcggcagat gacgaaggcg gaactggtcg aggccgttcg
     1441 cgaaggggct gggatcggaa aagggcaggc tgaagaggcg gtagcggcgt ttctcggcgc
     1501 ggtcgtcaag agcttgaaga agggggagaa gctcacgctg accggcttcg ggacgttcag
     1561 cgtcagcaac cggaaagccc gcacggggcg caatccccag acgggcgaga cgatcaagat
     1621 caaggcggcc aaggttccca agttcagcgc gggcaaggca ctcaaggaag cggtcggcgg
     1681 aaagaagaag taaggcgcgc ctgcgtccga tccggcagtt gcctctccga cagatttcgc
     1741 gccccggccg aaccggtatc cggccggggc gtttcctttc cgggggtggc catgttctcg
     1801 acgatcctgt taccttccga tttttccaac tgttccgccg aggcggcccg cgcggcgcgt
     1861 cggctcgccg agtgcttcgg atcccgcctc at
//
LOCUS       DATGYW010000685         2865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_365946, whole genome shotgun sequence.
ACCESSION   DATGYW010000685 DATGYW010000000
VERSION     DATGYW010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2865
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_365946"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..907
                     /locus_tag="VK429_09640"
     CDS             <1..907
                     /locus_tag="VK429_09640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011734355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HLN92100.1"
                     /translation="FRPGLRQAAIGTVSEIAGQCDGIRCDMAMLMLNGVFERTWGARA
                     GAKPADDFWTTVIPAIQGRHREFRFLAEAYWDLEWELQRQGFDYCYDKKLYDRMEHGD
                     AESVRQHLLADSSYQEGMVRFIENHDEPRAAATFPSGKGRAAAVAILTLTGAKLLHEG
                     QSEGRKMRLPVFLGRRPEEPVDRDLAAFYVLLLKVVHRDLFRNGEWRLCERSGWPDNQ
                     SCRNLLAWCWVRDEERCFVVVNFSSGTSQALVHVPWDDLRGKTWRLTDALSGDVYDRS
                     GNEMRDSGLYVDLPPWGYHIFALGS"
     gene            933..1982
                     /locus_tag="VK429_09645"
     CDS             933..1982
                     /locus_tag="VK429_09645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019670249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HLN92101.1"
                     /translation="MKAITVEPMKPGTARLEEIPEPDAHDGSVLVEAVAVGVCGTDIE
                     IVEGMYGWAPPGKTRLVLGHESLGRVIDPGPRCSLKKGDLVVGIVRRPDPVPCPNCAV
                     GEWDMCRNGQYTERGIKQIDGYMSERWRIEPEYAIRLDPTLGILGVLLEPTTVVAKAW
                     EMVRMIGRRSFWEPRTVLVTGAGPIGLLAALIGVQYGFEVHVLDRVTSGHKPDLVKAL
                     GAAYHSTSVANVGIEPDIIIECTGVGQVIADSIRNVGSSGIVCLTGVGRGGAAAGAAI
                     ADIAAVAVLRNNVIVGSVNANKRHWYKAGEVLARADRKWLEDLITRRVKPENFKQALD
                     RDPDDIKVVVQFAEA"
     gene            1945..2787
                     /locus_tag="VK429_09650"
     CDS             1945..2787
                     /locus_tag="VK429_09650"
                     /inference="COORDINATES: protein motif:HMM:NF012455.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MIP/aquaporin family protein"
                     /protein_id="HLN92102.1"
                     /translation="MTSRSSSSSPRHDLARSGVTDRNGWRIPWQVFSSELVGTALLVS
                     VGLSVVILMFGAGSPMIRVVPSEGARRLITGFLFGTTGALIALSPVGKESGAHINPVV
                     TLGFWLMGKLDSRVALGYVLAQLTGATVGVLPLLGWGSMGRSVAFGATLPGDGYTLWT
                     VMMGEVITTFALIAGLCVFLGFRKLRRYTPALFPFLYAIMVYVEAPISGTSTNPARTL
                     GPAILSGEWEGWWVYWAGPLIGTFLAILVFSFLAKEIEVAKLYHFESDRRRMFCTMGR
                     EGPG"
BASE COUNT          508 a          809 c          992 g          556 t
ORIGIN      
        1 cttccggccg gggcttcggc aggccgcgat cgggacggtc tcggagatcg ccggacagtg
       61 cgacggcatc cggtgcgaca tggccatgct gatgctgaac ggcgtcttcg agcgcacctg
      121 gggggcccgt gcgggagcaa aaccggcaga cgatttctgg acgacggtca tcccggcgat
      181 ccaagggagg catcgggagt tccggttcct agccgaggcg tactgggacc tcgagtggga
      241 gctgcagcgg caggggttcg actactgtta cgacaagaag ctttatgacc ggatggagca
      301 cggggacgcc gagagcgtgc gccagcacct ccttgcggac tcttcctacc aggagggaat
      361 ggtccggttc atcgagaacc atgacgaacc cagggcggcc gccaccttcc cgtccgggaa
      421 aggacgcgcc gcggcagtgg cgatcctcac gctcacgggg gcgaagctgc tgcacgaggg
      481 gcagtccgag ggaaggaaga tgaggctgcc cgtcttcctg ggccgtcgcc cggaagagcc
      541 ggtcgatcgg gacctcgcgg ccttctacgt gcttctgttg aaagttgtcc atcgagatct
      601 cttccggaac ggcgaatggc gcctctgcga gcggagcggc tggcccgaca accagagctg
      661 ccggaacctc ctggcctggt gctgggtcag ggacgaagag cgctgcttcg tcgtcgtgaa
      721 tttttccagc gggacctcgc aggcgctcgt ccatgtgccg tgggatgacc tgaggggcaa
      781 gacgtggcgt cttacggatg ccttgtcggg agacgtctac gaccgcagcg gtaacgagat
      841 gagggattcc ggcctgtacg tcgacctgcc gccctggggg taccacatct tcgccctggg
      901 cagttgatat atgcgaatcg ggaggtgatc ccatgaaagc catcacggtg gaaccgatga
      961 agcccgggac agcccggctg gaggagatcc cggagcccga tgcgcatgac ggatccgtgc
     1021 tggtggaagc cgtcgcggtc ggggtctgcg ggaccgacat cgagatcgtg gaggggatgt
     1081 acggctgggc gcctcccggg aagacgcgcc tcgtgctggg ccacgaatcc ctaggccgcg
     1141 tcattgatcc aggtccaaga tgttcgctga aaaaagggga cctggtggtg gggatcgtcc
     1201 gccgcccgga cccggttccc tgtcccaact gtgcggtggg ggaatgggac atgtgccgca
     1261 acgggcaata caccgagcgg ggcatcaagc agatcgacgg gtatatgtcc gagcgatgga
     1321 ggatcgaacc cgagtacgcg atccgattgg atcccacgct gggcatcctc ggcgtgttgc
     1381 tggagccgac gacggttgtg gccaaagcgt gggagatggt gaggatgatc ggtcgacgtt
     1441 cgttctggga accgcggacg gtgctcgtaa ccggcgcagg gcccatcggc cttctcgcgg
     1501 ctctcatcgg agtgcagtat ggattcgaag tccatgtcct ggatcgcgtc acctcgggtc
     1561 acaagcccga tctggtgaag gccctcggtg cggcgtatca ctcgacaagc gtcgcgaacg
     1621 tcggcatcga accggacatc atcatcgagt gcacgggggt tggccaggtc atcgccgatt
     1681 ccatcagaaa cgtgggatcc agcgggatcg tatgtctcac cggcgtcggc aggggcggcg
     1741 cggcagccgg agcggccatc gcggatatcg ccgccgtcgc ggtgcttcga aacaacgtca
     1801 tcgtcggaag cgtgaacgcc aacaagcggc actggtacaa ggccggcgaa gtcctggcca
     1861 gggcggatcg gaagtggctg gaggacctca ttacgcggcg ggtaaaaccg gagaatttca
     1921 aacaggcgtt ggatcgtgac cccgatgaca tcaaggtcgt cgtccagttc gccgaggcat
     1981 gatttggcgc gatcgggtgt gacggatcgg aacggttggc gaatcccctg gcaggtattc
     2041 tcttccgaac tcgtcggtac ggctctgctg gtatcggtcg gtctgtccgt ggtcattctg
     2101 atgttcgggg ccggcagccc catgatacgg gttgtgccga gcgaaggggc gcgccgtctg
     2161 atcaccggtt tcctgttcgg caccacgggc gccctcatcg ctctgtcccc tgtcggaaaa
     2221 gagagcgggg cgcatatcaa cccggtcgtc accctggggt tctggctgat ggggaaactc
     2281 gattcgaggg ttgctctcgg ctacgtgctg gcgcagttga ccggtgcgac ggtgggtgtt
     2341 ctgccgttac ttggctgggg atcgatgggc cggagcgtgg cgttcggcgc cacgctgccg
     2401 ggcgatggct acaccctctg gaccgttatg atgggcgaag tgattacgac gttcgccctg
     2461 atcgcaggat tgtgcgtgtt cctcggattt cgaaagttgc gtcgctacac cccggcgctg
     2521 tttccgtttc tctatgccat catggtttat gtggaggcgc cgatatcggg caccagcacg
     2581 aatcccgccc gcaccctcgg cccggcgatc ctgtccggag aatgggaggg atggtgggtt
     2641 tattgggcgg gcccgctgat cgggacgttc ctggcgatcc ttgtcttcag tttcctggcg
     2701 aaggaaatcg aggttgcgaa gctgtatcat ttcgagagcg atcgtcgccg catgttttgc
     2761 acgatgggcc gggaaggtcc tggctaacgg agctgccgtg aagcgatctt ttcgaaacgt
     2821 ttctcttttt atagtatcct actcaaaact cacaggaggt acacc
//
LOCUS       DATGYW010000686         2088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_266177, whole genome shotgun sequence.
ACCESSION   DATGYW010000686 DATGYW010000000
VERSION     DATGYW010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2088
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266177"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            38..607
                     /locus_tag="VK429_09655"
     CDS             38..607
                     /locus_tag="VK429_09655"
                     /inference="COORDINATES: protein motif:HMM:NF025273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HLN92103.1"
                     /translation="MKRGTLSRNGIGAVPLILALVVLLLGVLLLYRNWQQGREVTKVE
                     TGTTAWPSGSRTAPAFSLKDTNGNLFSSAQLAGKPAVINFFATWCPPCREEIPGFVEV
                     YNKHKENGFELIGISLDTDTRGNLPGFLMSNKIGYRILYGDLATARAYGGVSSIPTTF
                     FVGKDGEIKNVHIGYIDKDAFDKEVQKLL"
     gene            complement(702..872)
                     /locus_tag="VK429_09660"
     CDS             complement(702..872)
                     /locus_tag="VK429_09660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005809805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HLN92104.1"
                     /translation="MAYKITEECIACGACTPECPAQCISEGDPIYTIDASKCTDCAAC
                     AGVCPTAACVPA"
     gene            complement(901..1119)
                     /locus_tag="VK429_09665"
     CDS             complement(901..1119)
                     /locus_tag="VK429_09665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013495233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HLN92105.1"
                     /translation="MRSEVEKVLEGIRPALQADGGDVELVDIDGGVVKVRLMGACGGC
                     PMATMTLKGGIEAALKERIPAVERVESV"
     gene            complement(1213..1851)
                     /locus_tag="VK429_09670"
     CDS             complement(1213..1851)
                     /locus_tag="VK429_09670"
                     /inference="COORDINATES: protein motif:HMM:NF013962.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS and ACT domain-containing protein"
                     /protein_id="HLN92106.1"
                     /translation="MNVAKRMKRNPVFVDEGDSMKKAMDLLKEHEIRHLPVLKDGDRL
                     VGILSERDIKQASPSPATALEIREIYYLLDKVKVKQIMTRRPYTISSTAPVEEAALII
                     REKKIGCLPVVDDGKLVGILTETDIIDSFIESMGVSGPGYRIEIALANKPGMLFEVLK
                     LLKDFNVNILSVATSPQDDPGRKVFVLRIEARNYKVVKAAIRKSGFDLLSAD"
     gene            complement(1889..>2088)
                     /locus_tag="VK429_09675"
     CDS             complement(1889..>2088)
                     /locus_tag="VK429_09675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92107.1"
                     /translation="YLLVVSARDRLLGTPTVAAFPEGAFVSGERDGRSFVLWEREEAT
                     CIVVSEGEVTRTFDLVRRLFT"
BASE COUNT          394 a          669 c          628 g          397 t
ORIGIN      
        1 aaatcaggtg gatagatcgc aacccggggg acgcggaatg aagaggggca cgttgtcgcg
       61 aaatgggatc ggggcggttc cgctgatcct ggcgttggtc gtgttgctgc tgggagtcct
      121 cctgctgtac cggaattggc aacagggacg ggaagttacg aaggtagaga cggggacgac
      181 agcgtggccc tccgggtcga ggaccgctcc cgcgttctcc ctcaaggaca cgaacgggaa
      241 cctcttctcc tccgcccaac tcgcggggaa gcctgcggtc atcaacttct tcgcgacctg
      301 gtgcccccct tgccgggagg agatccccgg cttcgttgag gtgtacaaca agcacaagga
      361 gaatgggttc gagttgatcg gcatctcgct cgataccgac acgcggggga atctgccggg
      421 attcctgatg agcaacaaga tcggttacag gatcctgtac ggggacctgg ccaccgccag
      481 ggcgtacggc ggggtctcct ccatccctac caccttcttc gtgggaaagg acggggagat
      541 caaaaacgtc cacatcggct acatcgacaa ggacgccttc gacaaggaag ttcagaaact
      601 gctgtaaggt ggaggtaata gaggggggcg aaaaggtgtc ctttcgcccc cctccgggac
      661 cggcgtccgc cggccaggtt tcgccccggt aacgcccgtt tctacgccgg gacgcacgcc
      721 gcggtagggc acacccccgc gcacgccgca caatccgtgc acttgctggc gtcgatcgtg
      781 tagatcggat cgccctccga aatgcactgg gcggggcatt ccggcgtgca tgcgccgcag
      841 gcgatgcact cctccgtgat tttgtacgcc atgacacctc cctccgaaca ggttagtggg
      901 ttatacggat tccacccgtt cgacggccgg aatccgctcc ttgagagccg cctcgatgcc
      961 gcccttcaac gtcatggtgg ccatcgggca accgccgcat gcgcccatga ggcgcacctt
     1021 caccacgccg ccgtcgatgt cgacgagttc cacgtctccc ccatcggcct ggagggcggg
     1081 gcgaatgcct tcgagcactt tctcaacttc tgatctcacc ggtacacctc ctcgatatcc
     1141 tgcagtatcg ccaacacacc tgcacctcta caataggatg cggggggagg atccgccgtt
     1201 ccttgacgcg ggtcaatcag cggaaagaag atcgaacccc gacttcctga tcgccgcctt
     1261 caccaccttg taattcctgg cttcgatacg caggacgaac accttgcgcc ccggatcgtc
     1321 ttgcggcgag gtggccaccg acaagatgtt cacgttgaaa tccttcagga gcttcaacac
     1381 ctcgaagagc atcccgggct tgttcgccag cgcgatttcg atgcggtacc ccgggccgct
     1441 gacgcccatc gattcgatga agctgtcgat gatgtcggtc tccgtgagga tcccgacgag
     1501 tttcccgtcg tccaccacgg gcaggcagcc gatcttcttc tcccggatga tgagggccgc
     1561 ctcttcgacc ggggccgtgg aggagatggt gtacggccgc cgggtcatga tctgcttcac
     1621 cttgaccttg tcgagaaggt agtagatctc ccggatctcg agggcggtcg ccggtgaagg
     1681 ggacgcctgt ttgatgtcgc gctcggagag gatgccgacg agccggtcgc cgtctttcag
     1741 gacggggagg tgacggatct cgtgttcctt cagcaggtcc atcgccttct tcatcgagtc
     1801 cccctcgtcg acgaaaacgg ggttccgctt catccgcttg gcgacattca tcgcagtccc
     1861 tccttggcga attcggttcc gctccgaatc aggtgaacag acgacggacc aggtcgaacg
     1921 tccgtgtcac ttcgccctcc gaaacgacaa tgcaggtggc ctcctcccgc tcccacagga
     1981 cgaacgacct gccgtcccgc tcccccgaga cgaacgcccc ctcgggaaac gccgcgacgg
     2041 tcggggtccc gaggagccgg tcccgggctg acacaacaag aagatacc
//
LOCUS       DATGYW010000687         2200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_208904, whole genome shotgun sequence.
ACCESSION   DATGYW010000687 DATGYW010000000
VERSION     DATGYW010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208904"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VK429_09680"
     CDS             complement(<1..214)
                     /locus_tag="VK429_09680"
                     /inference="COORDINATES: protein motif:HMM:NF023222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HLN92108.1"
                     /translation="MMNGTQYVESLEKLHPRIFYRGKRLESPYDHPALRPHIRTAAAT
                     YDLAADGQHDEVMTATSNLDGAKISRF"
     gene            complement(211..1755)
                     /locus_tag="VK429_09685"
     CDS             complement(211..1755)
                     /locus_tag="VK429_09685"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF004837.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase"
                     /protein_id="HLN92109.1"
                     /translation="MVTFRTIADIPYLQARSRGGKTAVVTDTGDPVSFAALDDRCRRF
                     AAFLGSRSVASGERVALLLQNVPEFVVAYFGAIAAGCVAVPVNYRLSPPEIAYILSDC
                     DAAVVVTTAEQFDKVAGQEGVRAVRIWLLVDGRREGSLPFDDALSADPVSAPAPAAPD
                     DVAVLLYTSGTTGFPKGAMISHRNTLFNVDSCRAKLGYREDDVGLLTLPLFHVTGLHS
                     QLVALLACGATVVLQKEYDTGQVLERIARNRVTALFFVPAIYKLFTLRNDIGRYDLSS
                     VRIAAYGGAPMAPETIEALNRVMPASLHNCYGLTECSSLGTVLPSEFALTRSGSVGLP
                     VPGTEAEVRGTDGGTLPPGEPGELYLRGPHIVQGYFGAPEKTREAIRDGWLKTGDIAR
                     IDGDGFVYILDRAKDMINRGGEKIYSLEVENVLYMCPGVAEAAVFGIPHPVFGEVPAA
                     RLVPLPGATIDPEEIQAFCRARLADYKVPVQVGIADRIPRNPGGKILKKELRREWENR
                     SKENTR"
     gene            complement(1749..2174)
                     /locus_tag="VK429_09690"
                     /pseudo
     CDS             complement(1749..2174)
                     /locus_tag="VK429_09690"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
BASE COUNT          369 a          773 c          688 g          370 t
ORIGIN      
        1 tgaaccgcga gatcttcgcc ccgtcgagat tcgacgtcgc cgtcatgacc tcgtcgtgct
       61 gtccgtccgc cgccaggtcg tacgtcgccg ccgcggtccg gatatggggc cgcaaggcgg
      121 ggtggtcgta cgggctctca agccgcttcc cccggtagaa gatccgggga tggagttttt
      181 ccaggctttc cacgtactgc gttccgttca tcatcgggtg ttctccttcg agcggttttc
      241 ccactccctc cgtaattcct tcttcaatat tttccccccc gggttccgcg ggatccgatc
      301 cgcgatcccc acctggaccg ggaccttgta gtccgcgaga cgggcgcggc agaacgcctg
      361 aatctcctcc gggtcgatcg tcgcaccggg cagtggaacc aggcgggccg ccggcacctc
      421 tccgaacacg gggtggggga tgccgaacac cgccgcttcc gcgacccccg ggcacatgta
      481 gaggacgttc tccacctcga ggctgtagat cttctccccg ccgcggttga tcatgtcctt
      541 ggcccggtcc aggatgtaca cgaaaccgtc cccgtcgatg cgggcgatgt ccccggtctt
      601 gagccacccg tcccggatcg cttcccgcgt cttttccggc gcgccgaaat acccctgcac
      661 gatgtgcggc ccccgaaggt acagctcccc cggctccccg ggcggaagcg ttcccccatc
      721 ggtccctcgc acctcggcct ccgtccccgg gacaggaagc ccgaccgacc cggaccgggt
      781 aagagcgaac tccgagggga ggacagtccc gagcgacgaa cactccgtca gcccgtagca
      841 gttgtggagg ctggcgggca tcacccggtt caacgcctcg atcgtctccg gcgccatcgg
      901 ggcgccgccg tacgccgcga tcctcaccga cgagaggtcg taccggccga tgtcgttccg
      961 gagcgtgaac agcttgtaga tcgccgggac gaaaaagagc gccgtgacgc ggttccgggc
     1021 gatccgctcg agaacctgcc ccgtgtcgta ctccttctgc agcaccacgg tcgcgccgca
     1081 cgccagaagg gccaccagct gggagtgaag ccccgtcaca tgaaacaggg gcagcgtgag
     1141 gaggcccacg tcgtcctcgc gatatcccag cttggcgcgg caggaatcga cgttgaacag
     1201 ggtgttccgg tgggagatca tcgccccctt ggggaaaccg gtggtccccg acgtgtacag
     1261 gagcacggcc acgtcgtcgg gagccgccgg cgccggcgcg gagaccgggt ccgcagagag
     1321 ggcgtcgtcg aacggaaggg aaccttccct ccttccatcc acgaggagcc agatccgcac
     1381 cgcccgcaca ccttcctgcc cggcgacctt gtcgaactgc tccgcggtcg tcacgacgac
     1441 cgcagcgtcg caatccgaca ggatgtaagc gatttcggga ggggaaaggc ggtaattcac
     1501 cggcaccgcc acgcacccgg ccgcaatcgc gccgaaatac gcgacgacga actccggcac
     1561 attctgcagc aggagggcga cacgttcccc cgaagcgacg gagcgggacc cgaggaaggc
     1621 ggcgaacctg cggcaacggt cgtccagcgc ggcgaacgac accggatccc ccgtgtcggt
     1681 gacgacggcg gtcttccccc cccgcgaccg cgcctgcagg tacggaatat cggcgatcgt
     1741 gcggaacgtc accatatcgt ccatccgccg tcgacgtaga tcgtctgtcc cgtgatgaaa
     1801 tccgacgcct tcgaggcgag gaagatcacc gtcccctcga gctcctccgg ctgcccccaa
     1861 cggcccatcg gcgtccgctc gttgatgaac cggaaccgct ccgggtcgtt ccgcagcgtc
     1921 gcgacgaggg gggtttcgaa ataggtgggg ccgatcgcgt tcacgtgaac gttgtgaggc
     1981 gcccactcga tcgccatcac cttcgtcatc tggttgatcc cgcccttgct gcaggcgtac
     2041 gccagctggt tgttcatccc cacggcgccg aagatcgagg agatgtggat gaccttcccc
     2101 cgctttcgcc ggatcatgtg gggggccacg gcctgcgcga cgaggaagta ccccttcagg
     2161 ttcgtgtcga ggacgcggtc ccactcctac tccgacaggt
//
LOCUS       DATGYW010000688         1629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_208964, whole genome shotgun sequence.
ACCESSION   DATGYW010000688 DATGYW010000000
VERSION     DATGYW010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208964"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1616)
                     /locus_tag="VK429_09695"
     CDS             complement(<1..1616)
                     /locus_tag="VK429_09695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92110.1"
                     /translation="MRKLVRFCRTHNVTSVPDLLSVRYGGTPWPGALATLFLVIGSVP
                     YISLQLRAVAISYDTIAGSPGGGMAAIGPMLLVALFLAAFALFFGGRYLDFTRPQGGV
                     LTAVATESVIKLVILLAAGVFVCYGVFDGVGDIYSRVLANPEWKRLTGLSDTAGNGYA
                     RWTAYFAIAVIDVFLLPRQFHVFVVQNGDESHIKTAMWMFPLYLLLINLFIVPIAFAG
                     LLLGLPAAAGDKFILAIPMLAGNRAMSLLVFLGGFSAATAMVVVSSVALGKMVANNLV
                     IPGILWARKGFHGYGYLLAATRASMLAVILLGYLYARLMSYNAALMEIGIISFVAVAQ
                     FGPAVFGGLYWKGGTAGGAVLGICAGFAAWFYTMILPAAVKAGFFDPAILTHGPLGVA
                     LLRPTDFLGAGIGDPVGNAVFWSLFLNLIGFVAGSLLIVPRLARVREEGLRSDAPEIG
                     PRNTVPDAGAHYPSLEDIEAVVTRYAGREKEREVGEVVREIREIKSRGETREAVIRQM
                     ELPVRLERILTGSIGAIAARNVLRDMLPIAL"
BASE COUNT          301 a          555 c          556 g          217 t
ORIGIN      
        1 agggcgatgg ggagcatgtc ccgcaggacg ttgcgcgccg cgatcgcccc gatggacccc
       61 gtgaggatcc gttcgagccg caccggcagc tccatctgtc ggatgaccgc ctcgcgggtc
      121 tccccccggc tcttgatctc ccggatctcg cggaccacct cgccgacctc cctctccttc
      181 tcccggccgg cgtatcgggt caccaccgcc tcgatgtcct cgagggacgg gtagtgcgcc
      241 ccggcgtccg gcactgtgtt gcgcgggccg atctccggcg cgtcggatcg caggccctcc
      301 tcccgcaccc tggcgaggcg cggaacaatg agcagggaac cggcgacgaa cccgatcagg
      361 ttcaggaaga ggctccagaa gacggcgttc cccaccgggt cgccgatccc ggcgcccaga
      421 aagtccgtgg gccgaaggag cgctacgccg aggggcccat gcgtgaggat cgccggatcg
      481 aaaaagccgg ctttcaccgc cgcggggagg atcatggtgt agaaccaggc ggcgaaccct
      541 gcgcagatgc cgaggaccgc gccgccggcg gtccccccct tccagtacag ccccccgaag
      601 accgccgggc cgaactgtgc gacggccacg aacgagatga tgccgatctc catcagcgcc
      661 gcgttgtacg acatcaggcg ggcgtacagg tatccgagga ggatgacggc gagcatcgag
      721 gcgcgcgtgg cggcgagcag gtacccgtac ccgtggaacc ccttccgggc ccacaggatc
      781 cccgggatga ccaggttgtt cgcaaccatc tttcccagcg ccaccgagga gacgacgacc
      841 atcgccgtgg cggcggaaaa tccgccgagg aagacgagca ggctcatcgc ccggttcccc
      901 gcgagcatcg ggatggcgag gatgaacttg tcgcccgcgg cggcgggaag gcccaggagc
      961 aggcccgcga acgcgatcgg gacgatgaag aggttgatga ggagcaggta cagcgggaac
     1021 atccacatcg ccgtcttgat gtgggactcg tcgccgttct gcacgacgaa cacgtggaac
     1081 tggcgcggca gcaggaagac gtcgatcacc gcgatggcga aataggccgt ccatcgggcg
     1141 tagccgtttc ccgccgtgtc cgacagcccc gtcagcctct tccattccgg gttggccagg
     1201 acccgggagt agatatcccc caccccgtcg aacaccccgt agcagacgaa cactccggcc
     1261 gcgagcagga tcacgagctt gatcacggat tcggtcgcca ccgcggtgag gacgcctccc
     1321 tgcggccggg tgaagtccag gtaccgcccg ccgaagaaga gggcgaacgc ggcgaggaac
     1381 agggcgacga ggagcatcgg gccgatcgcg gccatgccgc ctcccgggga gccggcgatc
     1441 gtgtcgtagg agatggcgac ggcgcgcagc tgcagggaga tgtacggcac gctgccgatc
     1501 acgaggaaga gggtcgcgag ggctcccggc cacggcgtcc ctccgtaccg aacgctcagg
     1561 aggtcgggga ccgaagtcac gttgtgggtg cggcagaacc ggaccagctt cctcaacacc
     1621 gtccaccac
//
LOCUS       DATGYW010000689         2718 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_266353, whole genome shotgun sequence.
ACCESSION   DATGYW010000689 DATGYW010000000
VERSION     DATGYW010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2718
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_266353"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..211)
                     /locus_tag="VK429_09700"
     CDS             complement(<1..211)
                     /locus_tag="VK429_09700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017964299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HLN92111.1"
                     /translation="MTVSHLSLENLRKAFGAKDVLNDVSLNVETGELLAILGPSGCGK
                     STLLRVVAGLLRADRGTVRIAGREMN"
     gene            complement(208..1032)
                     /locus_tag="VK429_09705"
     CDS             complement(208..1032)
                     /locus_tag="VK429_09705"
                     /inference="COORDINATES: protein motif:HMM:TIGR00969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit"
                     /protein_id="HLN92112.1"
                     /translation="MSRSLNMDSLVRGATFAAALGLFFLLILLPLVSLNQYAVREGIG
                     VFWDRLKNPDAVGALRLTALVALAATAVNAVIGTTMAFLLTRYRFPGRKVINALVDIP
                     LAIPTVVTGFALLLMYGPLGPVGRFLGERNIQVMFSFPGLLLGHVFVTFPFMVRAVGA
                     VLESVPRSGEDAARTLGAKEWQVFAFVTIPAVKEGIIAGAFLTFSRSLGEFGASIMVS
                     GNLVGRTQTGPLYIFSRFNTGDVEGAAAIAILLALASFLILLLLQFVQSPAGRRTV"
     gene            complement(1044..2027)
                     /locus_tag="VK429_09710"
     CDS             complement(1044..2027)
                     /locus_tag="VK429_09710"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HLN92113.1"
                     /translation="MKRLLFLVVVALFAVQPAYADTIKINLHSCCVTEDATTKEILPA
                     FKKYYKERFGKDVDVSASFAGSGTLKNQILGGAPVQVAVLSSELYLDQLKEKGLISSD
                     WRKNPNNGAVIKSVIVFVTRKGNPKGLATFEDLARPGTKVLHASPDTSGGAQWAIFAI
                     YGAGANFRNLSFGPEDGGVKLLSAVEKNVIAQPESARQTFVQFDAGFGDAIVTYENEA
                     LLEKAKGRDYTISVPKKTIETEWKVARVDRNIRPEQEHAVSELISFLYTADAQRSYAK
                     FGFRPVDKKVGKEFHTKYAQVAEPFTVDDLGGWKDARKNVIENVWKKTQAR"
     gene            2258..>2718
                     /locus_tag="VK429_09715"
     CDS             2258..>2718
                     /locus_tag="VK429_09715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92114.1"
                     /translation="MVPRPQAKEKFRMQAITGKHRAPFYLLFVLTLSITLAACGGGGS
                     SSDSGGGSTGTGLATIEGSVPGTIFMAVNNDTNLEVKRATANATTKTFSMDIPTGTNY
                     RFYVMENENTGNSRVYPMFMGTSNVFELDNTANGQIISLGMVNPDMATGNAT"
BASE COUNT          532 a          838 c          847 g          501 t
ORIGIN      
        1 cgttcatctc cctccccgcg atccggaccg tcccgcggtc cgcccggagg agtccggcca
       61 caacgcgcag gagggtcgac tttccgcacc cgctcggtcc caagatggcc agcagttccc
      121 ctgtttcgac gttcagggat acgtcgttca ggacgtcctt cgcgccgaac gccttccgga
      181 ggttttcgag ggagaggtgc gagacggtca cacggttctc cgtcccgcag gcgattgcac
      241 gaattgcagg agcaggagga tcaggaacga ggcgagggcg aggaggatgg cgatcgccgc
      301 cgccccctcc acgtccccgg tattgaaacg cgagaagatg tagagcggcc cggtctgcgt
      361 ccgccccacg aggttccccg ataccatgat ggaggcgccg aactcgccga gggagcgcga
      421 gaaggtcagg aacgcgccgg cgatgatccc ctccttgacg gccgggatcg tcacgaaggc
      481 gaacacctgc cactccttcg ccccgagcgt gcgggccgca tcttccccgg aacgggggac
      541 cgactcgagc acggccccca ccgcgcggac catgaacggg aaggtgacga agacgtggcc
      601 caggagcagc cccgggaagg agaacatcac ctggatgttc cgctccccga gaaacctccc
      661 caccgggccg agcggaccgt acatgaggag aagggcgaac ccggtgacca cggtcgggat
      721 cgccagcggg atgtccacga gcgcgttgat caccttcctc cccgggaacc ggtagcgcgt
      781 gaggaggaac gccatcgtcg tcccgatgac ggcgttgacg gcggtggcgg ccagcgccac
      841 gagggcggtc agccgcaggg cgccgacggc atccgggttt ttcagccggt cccagaacac
      901 cccgatcccc tcccgcacgg cgtactggtt cagggacacc agcgggagaa ggatcaggag
      961 aaagaagagc cccagcgcgg cggcgaaggt cgcgccgcgc accagggagt ccatgttcag
     1021 ggaccggctc atcgcagtgt ggcctacctt gcctgtgtct tcttccagac gttctcgatc
     1081 acgttcttcc gggcgtcctt ccatcccccg aggtcgtcca ccgtgaacgg ttccgccacc
     1141 tgcgcgtact tcgtgtggaa ctccttcccg accttcttgt ccacggggcg gaaaccgaac
     1201 ttcgcgtagg agcgctgggc atccgcggta tagagaaatg atatgagttc gctcaccgcg
     1261 tgctcctgct ccggacggat gttcctgtcg acccgggcga ctttccactc cgtctcgatc
     1321 gtcttcttcg gcacggaaat cgtgtagtcc cgccccttgg ccttctcgag cagggcctcg
     1381 ttctcgtagg tgacgatggc gtcgccgaat cccgcgtcga actggacgaa cgtctggcgg
     1441 gccgactcgg gctgggcgat cacgttcttc tccaccgcag agagaagttt cacgcccccg
     1501 tcctccggcc cgaacgagag gttccggaag ttcgcccccg cgccgtagat cgcgaagatt
     1561 gcccactgcg caccccccga ggtgtccggg ctggcgtgga ggaccttcgt gccgggtcgc
     1621 gcgaggtcct cgaacgtcgc gagtcccttc ggattccctt ttcgcgtgac gaagacaatg
     1681 acggatttga tcaccgcgcc gttgttcggg ttcttccgcc agtcggagga gatcagcccc
     1741 ttctccttca actggtccag gtacagctcg gaggagagga cggccacctg caccggcgcc
     1801 ccgccgagga tctggttctt cagcgtcccc gaaccggcga aggaggccga gacgtccacg
     1861 tcctttccga acctctcctt gtaatacttc ttgaacgccg ggaggatctc cttcgtcgtg
     1921 gcatcctccg tgacgcagca ggagtggagg ttgatcttga tcgtatcggc ataggcgggt
     1981 tggacggcga acagcgcgac gacgaccagg aagagcaggc gcttcatgat acctccgtaa
     2041 aacggtagat tttgtagggt aaagggctgc cggtgggtcc agctgaaata caatcttacc
     2101 ctataggatt tgtagtatat gtggatgctt catggtgtca agaaaaaaat cctgcatggg
     2161 gaaaatgcgg tcgatggtga ggagccaggc cgacaaaagg atgagaccgg aggaggaacc
     2221 tcccggctcc tgatcgggat cttattgttt ggaaaagatg gttcccagac cccaggccaa
     2281 ggagaaattt cgcatgcaag caattacggg taagcatcgc gcgccgtttt accttctgtt
     2341 cgttttgacg ctttccatta ctcttgcggc ctgcggtggc ggcgggagtt ccagtgattc
     2401 tggtgggggc agtaccggga ccggtttggc cactatcgag ggctcggtcc ccggaacgat
     2461 cttcatggcc gtgaacaacg atacgaacct tgaagtgaaa agggcgaccg cgaacgctac
     2521 cacaaagaca ttctcgatgg acatacccac agggacgaat tatcggttct acgtgatgga
     2581 gaacgagaac acgggtaatt cgagggtcta ccccatgttc atggggacga gcaacgtgtt
     2641 cgaactggac aacaccgcca acggccagat tatctctctc ggcatggtca atccggatat
     2701 ggccacggga aatgcaac
//
LOCUS       DATGYW010000690         1857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_157866, whole genome shotgun sequence.
ACCESSION   DATGYW010000690 DATGYW010000000
VERSION     DATGYW010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1857)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1857
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157866"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(211..405)
                     /locus_tag="VK429_09720"
     CDS             complement(211..405)
                     /locus_tag="VK429_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003491803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1059 domain-containing protein"
                     /protein_id="HLN92115.1"
                     /translation="MLRKTIDCREHPGDIKCSVTLSADSEDELMEAAMQHLTAVHKYK
                     DTHEVRETIRNGMTDGTPLK"
     gene            complement(661..>1857)
                     /locus_tag="VK429_09725"
     CDS             complement(661..>1857)
                     /locus_tag="VK429_09725"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HLN92116.1"
                     /translation="ARKGYAVTPWCAGTSLEGNPIPVKGGICLDFTEMNRILEIREKD
                     LQVDVEVGVPYRDLNNRLRHHGLFFPPDPGAQACIGGMIGNNASGVRTVAYGATRDCV
                     LALEAVMADGCVIRLGSRAIKSSSGYDLLRLMVGSEGTLGIVTQATLRLKGIPPEYLT
                     VVATFPTVRNACDAVSDTIRYGLNPAALELMDAAVVAEINRDRKMALDEKPMLFLEFH
                     NVNTSALESQFGMVEGLLQEHRAETVVRGIGADERIRLWDVRHGALESIKRNHPGRSV
                     LLVDTCVPISQYSEMVDKAREAVEREGAVGFVWGHAGDGNLHLGLMYDPADTAAWKAV
                     ERVNRAVVEHSIASGGTCTGEHGVGIGKLPFVAAEHGNALEYMRRIKAALDPQGILNP
                     GKMLPG"
BASE COUNT          298 a          613 c          544 g          402 t
ORIGIN      
        1 tacaagggtt acgggtcatt tccataaccc ttttattacg tctgccgtaa atctgccgta
       61 aaacactccg gtggcactgc aggcctctca tattcctgtc tcgcctcctg caatcccgcc
      121 aagcggacat cgcgcgatca ctcgaattcc cgcgatcgcg gggcgggccc accgtccttc
      181 tcgtgggccc gcgcggatcg tcggtgattt ttacttgagg ggggtcccgt ccgtcatccc
      241 gttccgaatc gtctcccgaa cctcgtgcgt atccttatat ttatgcacag ccgtcaggtg
      301 ctgcattgca gcctccatca attcatcctc ggagtcggcc gatagcgtta cactgcactt
      361 gatgtcgccg ggatgctcgc gacaatcgat ggttttccgt agcattttct ggtctccttt
      421 ttccttccag cggacagatc cgccgccggc gattttttcc cgcctattgt tgggatggcg
      481 ttttccccgg ttgcgtttcg ggtgcgaccc cgaatgtcga attccgaaag ttgtttggaa
      541 tgaaaaggta tccgatcttt cactattgca tctgcccgtc gtgtgcccga attattacag
      601 atagtgaaac cggaatttcc cggcgtccgg ttgatcgaat aacggcgggg cagttgcctt
      661 ctatccgggc agcatcttcc ccgggttcag gatcccctgc ggatccagcg ccgccttgat
      721 gcgccgcatg tattccaggg cgttgccgtg ctccgccgcc acgaacggca gcttcccgat
      781 ccccacgccg tgctccccgg tacaggttcc gcccgacgcg atgctgtgct ccactaccgc
      841 ccggttgacc cgctcgacag ctttccaggc ggccgtgtcc gcggggtcgt acatgaggcc
      901 cagatggagg ttcccgtcgc cggcgtgccc ccaaacgaac cctacggcgc cctcccgctc
      961 cacagcctcc cgcgccttgt ccaccatttc ggagtattgg ctgatgggca cgcaggtgtc
     1021 gacgagcaga acggaacggc cagggtggtt ccgcttgatc gattcgaggg ccccgtggcg
     1081 cacgtcccag aggcggatcc gctcgtcggc gccgatgccg cggacgactg tctcggcacg
     1141 gtgctcctgc agcagccctt ccaccattcc gaactggctc tccagcgccg aggtattcac
     1201 gttgtggaac tccaggaaga gcatcggttt ctcgtcgaga gccatcttcc ggtcccggtt
     1261 gatctcggcc acaacggccg cgtccatgag ttccagagcc gcgggattga gaccgtagcg
     1321 gattgtgtcg ctgacggcat cgcaggcgtt gcgaacggtc gggaaggtgg ccacgaccgt
     1381 caggtactcg ggcggaatcc ccttgagccg gagcgtcgcc tgggtcacga tccccagcgt
     1441 cccctcgctt cccaccatga ggcgcagcag gtcgtacccc gaggagctct tgatggcccg
     1501 gcttcccaga cggatcacac aaccgtccgc catgaccgcc tccagggcga ggacgcagtc
     1561 ccgggtggct ccgtacgcga cggtgcgcac cccggatgca ttgttgccga tcattcctcc
     1621 gatgcaggcc tgcgcgcctg gatccggcgg gaagaagaga ccgtggtggc gaagccggtt
     1681 gttgaggtcc cggtacggca cgccgacctc gacgtcgacc tggaggtctt tctcccggat
     1741 ctctagaatc cggttcatct ccgtgaagtc gaggcagatg ccgcccttaa ccgggatggg
     1801 gttgccttcg aggctggtgc ccgcgcacca cggggtgacg gcatatcctt tccgggc
//
LOCUS       DATGYW010000691         1510 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_209369, whole genome shotgun sequence.
ACCESSION   DATGYW010000691 DATGYW010000000
VERSION     DATGYW010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1510)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1510)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1510
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209369"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1408
                     /locus_tag="VK429_09730"
     CDS             <1..1408
                     /locus_tag="VK429_09730"
                     /inference="COORDINATES: protein motif:HMM:NF040246.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TGS domain-containing protein"
                     /protein_id="HLN92117.1"
                     /translation="MNRQGIDFDHVYDFIGFRITTKTVRECYEALGIVHNLWKPVPGR
                     FKDYIAMPKANLYQSLHTTVFGPNAEMMEIQIRTEEMHALAENGVAAHWKYKEGRRTA
                     EKGDQMFLWLRQILELQQDMKDPREFLNTVKVELFPEEVYVFTPRGDVKELPRGATPI
                     DFAYAIHTEVGNQCVGAKVNGRMVPLKVTLKNGDVVEIVTQPSHKPSRDWLKIAKTSR
                     ALSKIRVVVREEQQEQSLALGRQLLEKELRKHSLNLNKVMKGPEFAEVLQETRCRTAE
                     DYMRAVGYGKASVMPLLRRLLPADQLHEKSKESRLSTLIRKVVTRRPSTVVVKGIDSI
                     FVRLGNCCHPVPGDPIVGFITRGRGVTIHSKECPKVLESDPARAVEVTWEAGTKAVHP
                     VKLRVVCSDKPGLLADISRSITSSEVDIRRASVMTTRDQRAICDFEVSVNDADHLASL
                     MKSIGKVRGVQSVERGIG"
     gene            1410..>1510
                     /locus_tag="VK429_09735"
     CDS             1410..>1510
                     /locus_tag="VK429_09735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013821830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HLN92118.1"
                     /translation="MKREAVRTTGAPAAIGPYSQAVRAGGFLFCSGQV"
BASE COUNT          303 a          460 c          525 g          222 t
ORIGIN      
        1 gatgaatcgc cagggaatcg atttcgacca cgtctacgac ttcatcggat tccgcatcac
       61 caccaagacg gtgcgcgaat gctacgaagc cctcgggatc gtgcacaacc tctggaagcc
      121 ggtgcccggc cgcttcaagg actacatcgc catgccgaag gcgaacctct accagtcgct
      181 ccacacgacg gtcttcgggc cgaacgcgga gatgatggag atccagatcc gcacggagga
      241 gatgcacgcc ctcgccgaga acggggtggc ggcccactgg aaatacaagg agggtcgccg
      301 gacggcggag aagggggacc agatgttcct ctggctgcgg cagatcctcg agctgcagca
      361 ggacatgaag gacccccgcg agttcctgaa caccgtcaag gtcgagctgt tcccggagga
      421 ggtgtacgtc ttcacgccgc ggggcgacgt gaaggagctc ccgcgggggg ccacgccgat
      481 cgatttcgcc tacgcgatcc acaccgaggt cggaaaccag tgcgtcgggg cgaaggtgaa
      541 cggccggatg gtccccctga aagtgacgct gaaaaacggc gacgtcgtcg agatcgtcac
      601 ccagccgtcc cacaagccga gccgggactg gctgaaaatc gcgaagacca gccgcgcgct
      661 gagcaagatc cgcgtcgtgg tgcgggagga gcagcaggaa cagtcgctcg ccctgggccg
      721 ccagctcctc gagaaggagc tgcggaagca ttccctgaac ctcaacaagg tcatgaaggg
      781 gccggagttc gccgaggtgc tgcaggagac ccgctgcagg accgcggaag actacatgag
      841 ggcggtcggg tacgggaagg cgtccgtcat gccgctgttg cgccgcctcc ttcccgcgga
      901 ccagctgcac gagaagagca aggagtcgcg cctctccacc ctcatccgga aggtggtgac
      961 gcgcaggccc agcaccgtcg tcgtcaaggg gatagacagc atcttcgtcc gcctggggaa
     1021 ctgctgccac ccggtgccgg gcgatccgat cgtcgggttc atcacccggg ggcggggggt
     1081 cacgatccat tcgaaggagt gcccgaaagt cctcgagagc gatccggcga gagcggtcga
     1141 ggtgacctgg gaggcgggaa cgaaggcggt tcaccccgtc aagctgcgcg tcgtctgctc
     1201 cgacaagccg gggcttctgg ccgacatctc ccggagcatc acgtcgagcg aggtggacat
     1261 ccggagggcg tcggtgatga caacccgcga ccagcgggcg atctgcgatt tcgaggtgtc
     1321 ggtgaacgac gccgaccacc tggcctccct catgaaatcg atcgggaagg tccggggtgt
     1381 acaatccgtg gagaggggga tcgggtgaga tgaagcgcga agcggtgcgg acaacggggg
     1441 ccccggcggc gatcggtccc tactcacagg cggttcgggc aggcgggttc ctcttctgct
     1501 cgggacaggt
//
LOCUS       DATGYW010000692         1605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_366687, whole genome shotgun sequence.
ACCESSION   DATGYW010000692 DATGYW010000000
VERSION     DATGYW010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366687"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1225
                     /locus_tag="VK429_09740"
     CDS             <1..1225
                     /locus_tag="VK429_09740"
                     /inference="COORDINATES: protein motif:HMM:NF017633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NFACT RNA binding domain-containing protein"
                     /protein_id="HLN92119.1"
                     /translation="EESRIREVVPGIAYRPLPRPARIFLPDVTRDDAARIFADGWAGI
                     PKTLQENVAGLGREVAHEAAMRGRESPDALHGFLRDLVRRYEEGDFAPGIGTLASGKR
                     RILPFPCPAAGFADFLRFPTANAAADAYFGEVAQAREIAVLRQQIRSRITALLKKERH
                     KLENVGGDEERLVEALQGTARGETLKENLGSLKKGMDSFRDIPLDPSKTPVENMNRYF
                     RLARKAKAATEIVRNRKREVAESVYYLESLENQLEAAQVRDDVIAVRQELSSSFPSRV
                     KPSSKKRGARRDAPRPVIPQVEKVEFRGYAILVGRNNVGNDKIVKELSAPDDLWLHAQ
                     GIPGSHVLVKRLAGNEVPREVIEEAARLAVLHSRAKGSRNVPVFLAEARHVSKFKGAK
                     PGLVRIAKYSTVSVR"
BASE COUNT          285 a          540 c          516 g          264 t
ORIGIN      
        1 cgaggagagc cggatccggg aagtcgtccc cgggatcgcg taccgtccgt tgcccagacc
       61 cgcgcggatc ttcctgcccg atgtgacgcg ggacgatgcc gcccggatct tcgcagacgg
      121 gtgggcggga atcccgaaaa cattgcagga aaacgtcgcc ggccttgggc gggaagtcgc
      181 gcacgaagcg gcgatgcggg gacgcgaaag ccccgatgcg ctgcacgggt ttctgcgcga
      241 cctggtccgc cggtacgagg agggcgactt cgcccccggg atcgggacgc tcgccagcgg
      301 gaagcggcgg atcctcccct tcccctgccc ggcggcggga ttcgccgact tcctccgctt
      361 ccccaccgcc aacgctgcgg cggacgccta cttcggggaa gtcgcgcagg cgcgggaaat
      421 cgcggtcctc cggcaacaaa tccgatcccg gatcaccgcc cttctgaaga aggagcgcca
      481 caagctggaa aacgtcgggg gcgacgagga gcggctcgtc gaggccctgc aggggaccgc
      541 gcgtggagag acgctgaagg agaacctcgg atcgctcaag aaggggatgg attccttccg
      601 ggacatcccg ctcgacccct cgaagacccc cgtggagaat atgaaccggt acttccgact
      661 cgcccggaag gcgaaggcgg cgacggagat cgtgcggaac cggaagcgcg aggtcgcgga
      721 atccgtctac tacctcgagt cgctcgagaa tcagctcgag gccgcgcagg tgcgggacga
      781 cgtgatcgcg gtgcggcagg agctctcttc ctccttcccc tcgcgggtga agccgtcctc
      841 gaaaaagagg ggtgcgcgca gggacgctcc ccgtcccgtc atcccgcagg tggagaaggt
      901 cgagtttcgc ggctacgcga tcctggtggg gcgcaacaat gtcgggaacg acaagatcgt
      961 gaaggaactc tccgcccccg acgacctgtg gctccacgcg caggggatcc cgggaagcca
     1021 tgtgctggtg aagcgcctcg ccggaaacga ggttccccgc gaagtgatcg aggaggcggc
     1081 ccggcttgcg gttctccaca gcagggcgaa ggggtcgcgg aacgtcccgg tcttcctcgc
     1141 ggaggcccgt cacgtctcca aattcaaggg ggcaaaaccg ggcctggtcc ggatcgcgaa
     1201 atattccacc gtctctgtgc gataaatcat tttcccgtat ccgttcgagt ggatacgaag
     1261 cggcgcccga acgcctcgaa aaccgccttc gtcccgtctc gaggattggg atccgatttc
     1321 atcgaaatac cctccgtgcc cggcggaccg cccggccagg cctcctcggt gactcagaag
     1381 aatacgatcc cgatagccag caggccgatg aggcccccga cgacgatcgc ttcccgcctc
     1441 tttcctgaca tttccttccc ccggcgattc aaagagcccg ccccctatct ccggttcccc
     1501 cgttcctttt cctgcacctt gtcttcagaa cgcacattat ccacgggggg cccttgctgg
     1561 cgctccggct tcccggtcgc cttcggctcc gcttccttcg gcttg
//
LOCUS       DATGYW010000693         1507 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_366702, whole genome shotgun sequence.
ACCESSION   DATGYW010000693 DATGYW010000000
VERSION     DATGYW010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366702"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(281..>1507)
                     /locus_tag="VK429_09745"
     CDS             complement(281..>1507)
                     /locus_tag="VK429_09745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014856231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HLN92120.1"
                     /translation="TEMAWHALFARNMFLPVHREALRGHVPEFTVISAPGFHSRPEMD
                     GTRSEVFILIHFGRKEVLIGGTLYAGEIKKSIFTVMNFLLPAAGVLPMHCAASYGHDD
                     QDVAVLFGLSGTGKTTLSADPERTLVGDDEHGWSDRGVFNFEGGCYAKVINLSPGMEP
                     EIHRTTGMFGTILENVGMDIEERRIDLNDATLTENTRASYPLSSIPRIAPRGAVGHPK
                     HIVMLTADAFGVLPPISSMTTDQAMYHFLSGYTAKVAGTEQGVVEPQATFSTCFGGPF
                     MPLDPSVYAKLLGKKIATHDVKVWLVNTGWTGGPYGTGHRMEIGHTKAMLRAALSGKL
                     DGAGMREDPIFGLRVPASCPGVPPEVLDPRSTWKDRAAYDRTARKLAGMFQENFAQYA
                     DQVTPEVRAAGFRSPG"
BASE COUNT          240 a          494 c          503 g          270 t
ORIGIN      
        1 aggagatcga tcccttcgcc taggagcgcg gacaggatcc tcgccccttc ccctgccttg
       61 tcctgcacct gcgccttgaa atagtcgacc ttgcggatga tgtcccccat ggtcccctcc
      121 ctggcgcccc gcgtaggggc gcatctgtgt tgtcaggacc caaaaatctg cagtacagat
      181 tatggtcccg atacggggct cttgtcatgg agttgtgaaa tggccgaccg gtacgatttt
      241 cgtcaaatga tcgccgccgc ggaagaaggg caggaacggg tcagcccggg ctgcggaaac
      301 ccgcggcccg gacctcgggc gtcacctgat cggcgtactg ggcgaagttc tcctggaaca
      361 tcccggccag cttccgcgcc gtccggtcgt acgccgcgcg atccttccac gtcgacctcg
      421 ggtccaggac ctcgggcggc acgcccgggc agctcgccgg cacgcgcaat ccgaagatcg
      481 gatcctcccg catcccggcg ccgtccagct tcccggagag cgcggcgcgg agcatcgcct
      541 tggtgtgtcc gatctccatc cggtgccccg tgccgtacgg accgccggtc caccccgtgt
      601 tgaccagcca gaccttgacg tcgtgggttg cgatcttctt cccgaggagt ttcgcataga
      661 cggaagggtc gaggggcatg aacggtccgc cgaaacaggt gctgaacgta gcctgcggct
      721 cgacgacccc ctgttcggtc ccggccacct tggccgtgta gccggagagg aagtggtaca
      781 tcgcctggtc ggtcgtcatc gaggagatcg gcggaaggac cccgaaggcg tccgccgtaa
      841 gcatcacgat gtgtttcggg tggccgacgg cgccgcgggg ggcgatccgt gggatggagg
      901 agagcgggta ggaggcacgg gtgttttccg tgagggtcgc atcgttcagg tcgatccgcc
      961 gctcctcgat gtccattcca acgttttcga ggatcgtccc gaacatcccg gtcgtccggt
     1021 ggatctccgg ctccatcccg ggggagaggt tgatcacctt ggcgtagcac cccccctcga
     1081 agttgaagac gccgcggtcg ctccagccgt gctcgtcgtc gcccaccagc gtccgctccg
     1141 ggtcggcgga gagggtcgtc ttccccgttc ccgagaggcc gaagaggacc gcgacgtcct
     1201 gatcgtcgtg cccgtagctg gcggcgcagt gcatcggcag gacgcccgcc gcggggagca
     1261 ggaagttcat cacggtgaag atcgacttct tgatctcgcc cgcgtacagg gtgccgccga
     1321 tcagcacctc cttgcgcccg aagtggatca ggatgaagac ctcgctccgc gtcccgtcca
     1381 tctcgggacg ggagtggaag ccgggggcgc tgatgacggt gaattcgggg acgtggcccc
     1441 gaagcgcctc ccggtgcacc gggaggaaca tgttccgggc gaacagggcg tgccacgcca
     1501 tctcggt
//
LOCUS       DATGYW010000694         2298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_366772, whole genome shotgun sequence.
ACCESSION   DATGYW010000694 DATGYW010000000
VERSION     DATGYW010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366772"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..222
                     /locus_tag="VK429_09750"
     CDS             <1..222
                     /locus_tag="VK429_09750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92121.1"
                     /translation="LVLTREDRTSEIDLKPIVRTFGVNPGGISITIIQGTGKGVRPLE
                     AAASLLGVPLPPERLIPRKVSAVLIPRRG"
     gene            227..1756
                     /locus_tag="VK429_09755"
     CDS             227..1756
                     /locus_tag="VK429_09755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012468553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HLN92122.1"
                     /translation="MQKASKLIVVNAAPYETRVATLESGILVELLIERGEDRNTVGNI
                     YNGKVIRVLPGMQAAFVDIGMDKAGFLFAGDFVTPQLEFDTDPAEEPVLPEEIGIRPA
                     RFPQDTFIPPIEGLIREGQHLLVQVAKEPLGTKGARITSHITLPGRHLVLLTWSAHIG
                     ISRRIEDPEERDRLSKIVETIHPEGMGAIVRTAAEGRSEAELKADMDYLVRLWETIRK
                     RSESAAAPVLIHRELSLSLRAVRDLFSSESDRIAVDSQEEYDRIRSFASQFFPRIQDR
                     IELFGGPEPIFDHYGIEIEVTRALDKKVWLKSGGYIVIEQTEALTVVDVNTGKYVGRS
                     SLEETTAKINLEAVKEIVYQLRLRNIGGIIIIDFIDMKSEENREKVYNALVDTLRADR
                     SKTTICKISELGLVEMTRKRVRESLGRSLSDDCPYCSGEGVIKSKKTICYDVFRALER
                     QALILSGKQVSLYVHPALAEELFGEERRFLEILEQRYGMKVNISASDKYHIEQYRIEP
                     S"
     gene            1853..1927
                     /locus_tag="VK429_09760"
     tRNA            1853..1927
                     /locus_tag="VK429_09760"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1885..1887,aa:Thr,seq:cgt)
BASE COUNT          459 a          707 c          743 g          389 t
ORIGIN      
        1 ctcgttctca cgcgggagga ccggacctcc gagatcgacc tgaagccgat cgttcgcacg
       61 ttcggggtga acccgggggg catctccatt acaatcatcc agggaacagg taagggcgtg
      121 cggccgctcg aggccgccgc ctccctgctg ggggtaccgc tgccccccga acggttgatc
      181 ccgagaaagg tgtcggcggt cttgatcccc cgccgcgggt agcgcgatgc agaaggccag
      241 caagctgatc gtggtgaacg ccgcgccgta cgagacgcgc gtggcgacgc tcgaatccgg
      301 gatcctcgtg gaactgctga tcgagcgggg cgaggaccgg aacaccgtcg gcaacatcta
      361 caacggaaaa gtcatccgcg tcctccccgg gatgcaggcc gccttcgtcg acatcgggat
      421 ggacaaggcg gggttcctct tcgccggcga tttcgtcacg ccgcagctcg aattcgacac
      481 cgacccggcc gaggagccgg tcctgcccga ggagatcggg atccggcccg cccgcttccc
      541 ccaggacacc ttcattccgc cgatcgaggg gcttatccgg gagggacagc accttctcgt
      601 ccaggtggcc aaggaaccgc tcgggaccaa aggggcgagg atcaccagcc acatcaccct
      661 cccggggcgt cacctggtgc tcctgacgtg gtccgcccac atcgggatct cccgccggat
      721 cgaggacccg gaggagcggg accggctgtc gaagatcgtg gaaacgatcc accccgaagg
      781 gatgggcgcg atcgtacgta cggcggccga ggggcggtcg gaggcggaac tgaaggccga
      841 catggattac ctcgtccggc tctgggagac gatccgcaag aggagcgaaa gcgccgcggc
      901 ccccgtcctg atccaccggg aactctccct ttccctgcgc gccgtgcggg acctgttctc
      961 ctcggaaagc gaccggatcg cggtcgattc gcaggaggag tacgaccgga tccgctcgtt
     1021 cgcctcccag ttcttccccc gcatccagga ccggatcgag ctgttcggcg gtccggagcc
     1081 gatcttcgac cattacggca tcgagatcga ggtgacccgg gcgctcgaca agaaggtgtg
     1141 gctgaaaagc ggcggctaca tcgtgatcga gcagacggag gccctcaccg tggtcgacgt
     1201 gaacacgggg aagtacgtcg gacgatcgtc gctcgaggaa acgacggcca agatcaacct
     1261 ggaagcggtc aaggagatcg tctaccagct ccggctgcgc aacatcggcg gcatcatcat
     1321 catcgacttc atcgacatga agagcgagga gaaccgggag aaggtgtaca acgccctcgt
     1381 ggacaccttg cgcgccgacc gcagcaagac gacgatctgc aagatctcgg agctggggct
     1441 ggtcgagatg acccgaaagc gggtccggga gagtctggga cgatcgctgt ccgacgactg
     1501 cccctactgc tccggcgaag gggtcatcaa gtcgaagaag acgatctgct acgacgtgtt
     1561 ccgggcgctc gagcggcagg ccctgatcct ctccgggaag caggtgtcgc tctacgtgca
     1621 ccccgcgctg gccgaggagc tgttcggcga ggagcgtcgc ttcctcgaga tcctcgagca
     1681 gcggtacggg atgaaggtga acatctccgc atcggacaag taccacatcg agcagtaccg
     1741 catcgagccc agctgacgcg acggacgcac cggggggggg aattccggct tgacgatcct
     1801 cctacggctc cccatattta ttacctcgtt acggtttcac gcctcccgcc tggccggcgt
     1861 agctcagtgg tagagcagct gattcgtaat cagcaggtcg tcggttcaat cccgaccgcc
     1921 ggctccacga aaacaagggc ttacggagaa atccgtagcc cctttcttat gtctggtgta
     1981 attttggtgt aatcgtgcgg agggaattcc gcctcctggt cgcttcggga ggttccccac
     2041 cctgcccttt atccacacgg gccgatcttc catcgtctga tcagcatctt acatgaagga
     2101 cagagtatcg tttttacgga agatgaatcg ggggaggggg gaaggtcatg gtccggagag
     2161 catacattcg aaaagcggaa gaccggctcg ggcggctcga agacaacatc gatcatcttc
     2221 ggaagcagat gtcgacatcg gtgggcggta tcaggggccg gatcgagcag ggaatacggg
     2281 atctccaaat ccgggatc
//
LOCUS       DATGYW010000695         3650 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_366799, whole genome shotgun sequence.
ACCESSION   DATGYW010000695 DATGYW010000000
VERSION     DATGYW010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3650
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366799"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1151
                     /locus_tag="VK429_09765"
     CDS             <1..1151
                     /locus_tag="VK429_09765"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HLN92123.1"
                     /translation="YHRGLGVAVVCAAIYLLSCLRVSAIEPIDYLLRVSFLFLIALPI
                     GLLSAILRRDKEKIESLNRDLAGSLETLKHLQEKLLEVEKLSALGRLTADVAHEIRNP
                     LTAIGGFAKRLEKRLPDKTTEKEYARIVVNEVARLERILRDTLTFSREAKYHLHHADM
                     NSLLAQKEAKYGEICREKGLHLAVRPESGLPPCIVDEDQIRQAIDNLVTNAIDAMTDG
                     GTLTLATRTACENGTHYVVIDVSDTGPGISPDLVNRIFEPFYSTKEIGHGTGLGLSIC
                     KKIMEEHRGSIRVSAASGGGARFSLFLPYIPVDEIFKAQCWEIMRCGVEKGGNPAHRC
                     PAYPNYGRICWSVAGTLSETKVHCTVAEKIGDCRKCTFYEIVSPSCPA"
     gene            complement(1152..1451)
                     /locus_tag="VK429_09770"
     CDS             complement(1152..1451)
                     /locus_tag="VK429_09770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92124.1"
                     /translation="MDEEKKEVEVKAERLEEQLKEWGVDLEKFKSRANKARADVKTEI
                     EREVSTLRAKLNEAQKRLEELKMSGGAASTEMKKGVENAGAELKKAFDVARAKFK"
     gene            complement(1559..1786)
                     /locus_tag="VK429_09775"
     CDS             complement(1559..1786)
                     /locus_tag="VK429_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013531476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin family protein"
                     /protein_id="HLN92125.1"
                     /translation="MPLMMESGLHVGKVVEITAASTKSFEDAIVKGIDRASKTLKNVQ
                     GAWVKEQKVIVKEGKIVQYRVDLMVTFLLEE"
     gene            1949..2713
                     /locus_tag="VK429_09780"
     CDS             1949..2713
                     /locus_tag="VK429_09780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014400111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HLN92126.1"
                     /translation="MGDPVASKVLSVNRLRRLFGSTTAVDDVSFDVGRGEIVGLLGPN
                     GAGKTTIINMILGVLEPTSGTIHIEDADIATDRARALERTNFAAVYAPLPGNLTVYQN
                     LRVFGLMYGVKDHRERIEALLDRFDLKGLRNAKCGLLSSGEQTRVSLAKALLNQPRLL
                     LLDEPTASLDPAAASDIRAQIREFVPRDQVGVLWTTHNMYEVADVCDRVLFLSHGRIL
                     LEGDPDSLPFEHGKETLEELFIAIAREPLTLTRTRE"
     gene            2713..3516
                     /locus_tag="VK429_09785"
     CDS             2713..3516
                     /locus_tag="VK429_09785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011550850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HLN92127.1"
                     /translation="MPFHRTAAIVLRQFYLMRGSPVRVLPVFAWVAVDIVLWGFITRY
                     LNTIASPGFDFVPMLLGAILLWDFFTRVMHGVSIAFLEDVWSHNFLNLFASPLSIREY
                     VGGLVLTSIATSALGLVTMVFLATTVFGLSFFVYGVMLVPFLLVLFLFGIALGIFSSA
                     LVLRFGPASEWIVWPVPAFLSPFAAVFYPVSTLPTWMQQVSYLLPPSYVFEGMRAIVS
                     GGAYQGIPLLLSTCLSMLYILLASWFFARIHRHAVRTGLLARYSAESAS"
BASE COUNT          662 a         1167 c         1011 g          810 t
ORIGIN      
        1 gctatcaccg cggccttggc gtagccgtgg tgtgcgcggc gatctacctg ctttcctgtc
       61 ttcgcgtctc tgcaatcgaa ccgatcgact atctcctccg cgtttccttc ctgtttctca
      121 tcgcactccc gattggcctg ctctcggcga tccttcgcag ggacaaggag aagatcgaat
      181 cgctcaaccg ggatctggca gggtcgctgg aaaccttgaa gcaccttcag gagaaactcc
      241 tggaagtgga gaagctatcg gccctcggga ggctcacagc cgacgtggct catgagatcc
      301 gcaaccccct gacggctatc ggcgggttcg caaagcgtct tgagaagcgc cttccggata
      361 aaaccacgga aaaggagtac gcaaggattg tcgtcaacga agtggcgcgg ctcgaacgga
      421 tccttcggga cacgctgacc ttttcccggg aggccaagta tcatctccat cacgcggaca
      481 tgaactcgct tcttgcccaa aaggaagcga agtatggcga aatctgtcgg gagaagggtc
      541 ttcacctcgc ggtccgtccg gaatccggcc tgccaccctg tatcgtcgac gaagaccaga
      601 tccggcaggc catcgacaat ctggtgacca atgcgatcga cgcgatgacc gatggcggaa
      661 cgctgaccct ggcgacgagg acggcttgcg aaaacggaac ccactacgta gtcatagacg
      721 tatccgatac ggggccgggc atctcgcctg accttgtcaa caggattttc gagcccttct
      781 attccaccaa ggagataggc cacggcacgg gcctgggcct ttccatctgc aagaagatca
      841 tggaggaaca ccgcgggtcg atccgggtgt ccgcggcatc tggaggaggc gcgaggttca
      901 gtctcttcct gccgtacatt ccggtggacg agatattcaa ggcgcagtgc tgggaaatca
      961 tgcgttgcgg cgtcgaaaaa ggcgggaatc ccgcgcacag gtgcccggca tatccgaatt
     1021 acgggcgaat ctgctggtcc gtggcaggca cattatccga gacaaaggtc cattgcaccg
     1081 tggccgagaa gatcggagac tgccgcaagt gcaccttcta cgaaatcgtc agcccttcct
     1141 gccccgcctg atcacttgaa tttcgctctg gcgacgtcga acgccttttt cagttccgcc
     1201 cccgcgttct cgacgccttt cttcatctcc gtggaagcgg ccccgcccga cattttcagc
     1261 tcctcaagtc tcttctgggc ctcattcagc ttggcgcgca acgtggaaac ttcccgttcg
     1321 atctctgttt tcacatcggc cctggcctta ttcgccctgg acttgaactt ttcaagatca
     1381 actccccatt ctttcagctg ttcttccagt ctttccgcct tgacctcaac ttcctttttc
     1441 tcctcatcca tggcctcgct cctttcgttg caggtttgtc ccggttccaa gccggtcaca
     1501 agcagagagg gcatggacgg gacatcgcgt tcccgtcccg cccgttatcc tgccttcgtc
     1561 attcctccag gaggaacgtg accatcaggt ccacccggta ctggacgatc ttcccttcct
     1621 tcacgatcac cttctgttcc ttgacccagg caccttggac gttcttcaag gttttcgatg
     1681 cgcggtcgat ccccttgacg atggcatctt cgaagctttt cgtcgacgcc gccgtgattt
     1741 cgaccacttt tcctacgtga agacctgact ccatcatgag gggcatgtct cctccttcgc
     1801 actccgggag ccgaagcgca tttttccgtc atggatcgac gcgatcgacg gaaaccaggg
     1861 gccggttgac gggtcgatga ttgtatactg tatacagttt acggtgatcc ggcgggaaat
     1921 caagtatgat ccttcaggct tcctgaaaat gggggatcca gtggcatcca aggtgctctc
     1981 cgtcaaccgg ttgcgaaggc tcttcggcag cacgaccgcg gtcgacgacg tctcgttcga
     2041 tgtcggacgg ggcgagatcg tcggcctcct ggggccgaac ggagccggga agacaaccat
     2101 catcaacatg atcctggggg tcctcgaacc gacctcgggg acgatccaca tcgaagacgc
     2161 cgacatcgcc accgaccgtg cccgggcgct tgaacggacc aacttcgcgg ccgtttacgc
     2221 tccccttccc ggcaacttga ccgtgtacca gaacctgcgc gtcttcggac tgatgtatgg
     2281 ggtgaaggac caccgggaac gcatcgaggc gttgctcgac cggttcgacc tcaagggact
     2341 gcggaacgcc aagtgcggcc tgctctcgtc gggagagcaa acccgtgtaa gcctcgccaa
     2401 agcattactc aatcagccgc gccttctgct cctggacgaa ccgacggcgt cgctcgatcc
     2461 cgcagcggcg agcgatatcc gcgcgcagat tcgggagttc gtcccacgtg accaggtggg
     2521 agtgctttgg accacgcaca acatgtacga agtcgcggac gtctgcgacc gcgtgctctt
     2581 cctgtcccat gggaggattc tcctggaggg agacccggac tccctgccgt tcgagcacgg
     2641 caaggaaacg ctcgaggagc tcttcattgc catcgcgcgc gagccgctca cgctcacgcg
     2701 gacccgggaa tgatgccctt ccaccgcacc gcggcgatcg tacttcgcca gttctatctc
     2761 atgcgcggaa gcccggtgcg cgtgcttcct gtcttcgcgt gggtcgccgt cgacatcgtg
     2821 ctgtggggat tcatcacaag atatctcaac acgatcgcct cgcccggttt cgatttcgtt
     2881 ccgatgctcc tgggcgctat tcttctttgg gacttcttca cccgggtgat gcacggggtg
     2941 agcatcgcgt tcctcgagga tgtctggtcg cacaacttcc tgaacctttt cgcgtccccg
     3001 ctctcgatcc gggagtacgt gggcggactc gtgctcacca gcatcgcgac gagcgcattg
     3061 gggctcgtta cgatggtctt ccttgcgaca acggtcttcg ggctgtcctt cttcgtttac
     3121 ggggtcatgc tcgtaccgtt ccttctcgtg ctcttcctgt tcggcatagc cctcggaatc
     3181 ttctccagcg cgctggtgct ccggttcggg cccgcgtccg aatggatcgt ctggcccgtg
     3241 cccgctttcc tctccccctt cgccgcggtc ttctacccgg tatcgacgct ccctacatgg
     3301 atgcagcagg tctcctatct gctgcctccg tcgtacgtgt tcgagggaat gcgcgcgatc
     3361 gtctcgggcg gcgcctatca gggaatcccg ctgttattga gcacttgcct ctccatgctt
     3421 tacatcctgc tggcgtcgtg gtttttcgcc cgcatccacc gccatgcggt tcgcaccggg
     3481 ctgcttgccc gctacagcgc ggaaagcgca agctagtttc cccgtacggg ttccctacga
     3541 ggggatttcc cggccgaccc gatgaaataa cagtcccgcc aagacataga gaactgcgcc
     3601 gatcccaacc gtccagcgga aaccgagcca cagggcaccg attgacgcga
//
LOCUS       DATGYW010000696         1950 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_366822, whole genome shotgun sequence.
ACCESSION   DATGYW010000696 DATGYW010000000
VERSION     DATGYW010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366822"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..501)
                     /gene="argB"
                     /locus_tag="VK429_09790"
     CDS             complement(<1..501)
                     /gene="argB"
                     /locus_tag="VK429_09790"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013537251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HLN92128.1"
                     /translation="MEGYIRKAETLIEALPYIREFTGKTVVVKYGGAAMKDDARMASF
                     AQDIVLLQYVGIRPVIVHGGGPQIDRMLERLSIPTRRAEGLRVTSPEAMEVVEMVLGG
                     TVNQRIVALITTFGGKAVGLCGKDGGLILATKSTARSRETGKPLDLGLVGDVKEVRPE
                     VLRTLQA"
     gene            complement(518..1894)
                     /gene="hslU"
                     /locus_tag="VK429_09795"
     CDS             complement(518..1894)
                     /gene="hslU"
                     /locus_tag="VK429_09795"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018049197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HLN92129.1"
                     /translation="MTHAEPEDARIRSLIPREIVAELDRHIVGQAEAKRAVAIALRNR
                     WRRLQVPPELRDEIVPKNIIMVGPTGVGKTEIARRLAKLAQAPFVKVEASKFTEVGYV
                     GRDVESMIRDLVEIAVRMVRAEEMGKVADQAKAAAEERLLDLLLPGTPVKEGGDAAVS
                     DGGSADTRERFRAMLRAGKLSDRTVEVEFKETAAPVLDLAGFGGGAPEGMEGNLQEML
                     SGLFPKRTRRKRMRVAEALDFLEKEEASRRVDTERVKQMAVERTEQSGIVFLDEIDKI
                     AGRESLQGPDVSRQGVQRDLLPVVEGSAVHTKHGVVRTDHILFVAAGAFHANKPSDLI
                     PELQGRFPIRVELSALSRDDFVRILTEPHGALTRQYEAMLSAEGVRLSFTPEAVLRIA
                     EMACEVNDRTENIGARRLHTVMERLLDDLLFSAPEISGQEVVVTRPYVEERLAGIVKD
                     ADLSRYIL"
BASE COUNT          282 a          737 c          598 g          333 t
ORIGIN      
        1 ggcctggagg gtccgcagca cctccgggcg cacttccttc acgtctccca caagccccag
       61 gtcgagcggc ttgccggttt cccggctcct cgcggtgctc ttcgtcgcga ggatcagccc
      121 tccgtccttg ccgcagagtc cgaccgcctt cccgccgaag gtagtgatca gcgccacgat
      181 ccgctggttg acggtcccgc cgaggaccat ctcgaccact tccatcgcct ccggggaggt
      241 gacccgcagc ccctccgccc gccgtgtggg gatcgacagc ctctcgagca tccggtcgat
      301 ctggggcccc ccgccgtgga cgatcacggg acggattccg acgtactgga ggagaacgat
      361 gtcctgggcg aacgacgcca tccgcgcgtc gtccttcatc gcggcgccgc cgtacttcac
      421 caccaccgtc ttcccggtga actcccggat gtacggcagc gcctcgatca gcgtctctgc
      481 tttccggata tacccttcca tctctccccc acgcccctca gagaatgtat cggctgaggt
      541 cggcgtcctt cacgatcccc gcgagccgct cctcgacata gggccgggtg acgaccacct
      601 cctgcccgga gatctcggga gccgagaaca ggaggtcgtc cagcaggcgc tccatcaccg
      661 tgtggaggcg gcgggcgccg atgttctcgg tgcggtcgtt cacctcgcac gccatctcgg
      721 cgatccgcag caccgcctcg ggcgtgaacg agagccggac cccctcggcc gacagcatcg
      781 cctcgtactg gcgcgtgagc gcgccgtggg gctcggtcag gatccggacg aaatcgtccc
      841 tggagagggc cgagagctcc acccggatcg ggaaacgccc ctgcagctcc gggatgaggt
      901 cggacggttt gttcgcgtgg aacgcccccg cggcgacgaa caggatgtgg tcggtccgca
      961 cgacgccgtg cttcgtgtgg acggcggacc cctcgacgac cggcagcagg tcccgctgga
     1021 ccccctggcg ggagacgtcg gggccctgga gcgattccct gccggcgatc ttgtcgatct
     1081 cgtcgagaaa gacgatcccc gactgctcgg tgcgctcgac cgccatctgc ttcacgcgct
     1141 ccgtgtcgac ccgacgggac gcctcctcct tctcgaggaa gtcgagcgcc tcggcgaccc
     1201 gcatccgctt cctccgcgtc cgcttcggga acagcccgga gagcatctcc tggaggttcc
     1261 cttccatccc ctccggggcg ccgcccccga aacccgcgag gtcgagcacc ggagccgccg
     1321 tttccttgaa ctcgacctcg acggtccggt ccgagagctt ccctgcccga agcatggcac
     1381 ggaaccgctc cctggtgtcc gccgacccgc catcggaaac ggccgcgtcc ccgccctcct
     1441 tcaccggggt gcccgggagc agcaggtcga ggagccgctc ctcggcggca gccttcgcct
     1501 ggtcggcgac ttttcccatc tcttccgcgc ggaccatccg gacagcgatc tcgacgagat
     1561 cccggatcat cgactcgacg tcgcgcccca cgtatccgac ttcggtgaac ttcgacgcct
     1621 ccaccttgac gaagggcgcc tgcgcgagct tcgcgagcct tcgcgcgatc tcggtcttcc
     1681 cgaccccggt cggtccgacc attatgatgt tcttcgggac gatctcgtcg cgcagttcgg
     1741 ggggaacctg cagacggcgc cagcggttcc gcagcgcgat cgcgaccgca cgcttcgcct
     1801 ccgcctgccc gacgatgtgc cggtcgagct cggcgacgat ctcccgcggg atcaacgagc
     1861 ggatccgcgc gtcctccggc tccgcgtgcg tcatgacgcc ccgatctcct cgcatacgac
     1921 gttcccgttc gtgaagacgc agatctcgga
//
LOCUS       DATGYW010000697         1548 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_367359, whole genome shotgun sequence.
ACCESSION   DATGYW010000697 DATGYW010000000
VERSION     DATGYW010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_367359"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1381)
                     /locus_tag="VK429_09800"
     CDS             complement(<1..1381)
                     /locus_tag="VK429_09800"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HLN92130.1"
                     /translation="MSRRVVVLFFLSIAVIYYTGLGTLPLLEPDEGRYAEIPREMLAR
                     GDFVTPHLNGVVYLEKPPLFYWGNAASFALFGESEFSARFFTATVSIAGVLLTYWMGA
                     VLGGPRAGLFSAMVLCTSLYHYVVGRINTIDMTLAVAMIVAIFPAFLYLSWKRESRRY
                     LLLSYAGAGLAFLAKGLIGIVFPGGILLLWMLLSRRHREIGKAISLPGLALFLAIALP
                     WVLLVQRANPDFLWFFFVREHILRFATKMHHRYQPFWFFFPIVIGGLLPWLAFARRAV
                     RAAWNARETYLAAEDRRFLFCWVLFVLLFFSFSNSKLVTYAAPLFPPLAVLFGRALDL
                     WADREDGSVRCRTPLALAGILAAGIVLFPPFTEHVIEPSRWVRLCALPALLILAWGAM
                     PLFVRRLSAERVVYLSFLLLALFLTSINRPGAEYLGRYKSVKNLSSVLNASLREGDVV
                     AQYQTYRQGL"
BASE COUNT          341 a          476 c          549 g          182 t
ORIGIN      
        1 gaagcccctg gcgatacgtc tggtactggg ccacaacgtc tccctcgcgc agggaagcgt
       61 tgaggacgga ggagagattt ttcacggact tgtatcttcc gagatattcc gcccccgggc
      121 ggttgatgga ggtgaggaac agtgcgagga gcagaaacga caggtagacg acccgctccg
      181 ccgaaagccg gcggacgaac agcggcatcg cgccccacgc gaggatcagc agcgcgggaa
      241 gcgcacatag gcggacccac cgcgacggtt cgatcacgtg ctcggtgaag ggggggaaca
      301 gcacgatccc ggcggccagg atccccgcca gggcgagagg ggtccggcaa cggacggacc
      361 cgtcctcccg gtcggcccac aggtcgagcg cgcgcccgaa gaggacggcc agcgggggga
      421 ataacggcgc cgcgtaggtg acgagcttcg agttggagaa ggagaagaag agcaggacga
      481 agagaaccca gcagaagagg aaccgccgat cctccgccgc caggtacgtc tcccgggcat
      541 tccacgcggc gcgaacggcg cggcgcgcga acgccagcca cgggagaaga cccccgatca
      601 cgatggggaa gaagaaccag aacggctggt accggtggtg catcttcgtc gcgaagcgca
      661 ggatgtgttc ccgcacgaag aagaaccaga ggaaatccgg gttcgcccgc tgcacgagga
      721 ggacccacgg cagggcgatc gcgaggaaca gggcgagccc cgggagcgag atcgccttcc
      781 cgatctcccg gtgacgccgc gacagcagca tccagagcag gaggatcccc ccagggaaga
      841 cgatcccgat cagacccttc gcgaggaacg cgaggcctgc gcccgcgtac gagaggagca
      901 ggtacctccg gctctcccgc ttccacgaca gatagaggaa ggcggggaag atcgcgacga
      961 tcatcgcgac ggcgagggtc atgtcgatgg tgttgatccg cccgacgacg tagtggtaga
     1021 gggaggtgca gagcaccatg gcggagaaga ggccggcgcg gggccccccg agaaccgccc
     1081 ccatccagta cgtgaggaga acccccgcga tcgaaacggt ggcggtgaag aatcgcgccg
     1141 agaactcgct ctccccgaag agcgcgaagg aggcggcgtt cccccagtag aagagcggcg
     1201 gtttctcgag gtacaccacg ccgttcaggt gcggggtgac gaagtctccc cgtgcgagca
     1261 tctccctcgg gatctccgcg taccgcccct cgtcgggctc gaggaggggg agggttccca
     1321 acccggtgta gtagatgacc gcgatggaga ggaagaagag gacgacgacg cgacggctca
     1381 cgcggcgtct ccgtagtgcg ctcggggcgg catgcccggg attatacccc atccccggga
     1441 aggcagaaca agccgatccg cggcacgcgg ggcgggtctg gtataatggc cggcaacgtt
     1501 ccccacccga cccgaaaaag gagggtatca tgcgccacca cgtcacaa
//
LOCUS       DATGYW010000698         2435 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_101740, whole genome shotgun sequence.
ACCESSION   DATGYW010000698 DATGYW010000000
VERSION     DATGYW010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101740"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(566..1225)
                     /locus_tag="VK429_09805"
     CDS             complement(566..1225)
                     /locus_tag="VK429_09805"
                     /inference="COORDINATES: protein motif:HMM:NF019265.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HLN92131.1"
                     /translation="MSAERWKEDEALLESLRKGDPGAVDELLGLYQGKIFNLAMSILK
                     NESDAEEAAQDVFMTVIRKVGTFQGNSAFYSWIYRICVNTCLMRLRGKRRNETVSIEE
                     FMPVFTDEGMHASPMDDWSKEVERDALNEELGRMIRKYTEELSEKYRVVFILSDVEGL
                     SNEETAKILGLTVPAIKFRLHRARLCLRERLSRYLWDGSSGLAVRQPDLKSGLENRHS
                     F"
     gene            1456..1617
                     /locus_tag="VK429_09810"
     CDS             1456..1617
                     /locus_tag="VK429_09810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92132.1"
                     /translation="MKKCHLTLIALMTAGTATFLFALLRRREAAPATPYDRPKGGERE
                     GDFELFIGS"
     gene            complement(1637..>2435)
                     /locus_tag="VK429_09815"
     CDS             complement(1637..>2435)
                     /locus_tag="VK429_09815"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: protein motif:HMM:NF024754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HLN92133.1"
                     /translation="LPQMSPAEALHALLSGAGYLAALEAAAREPGEGREGAGREEDLE
                     HVRELLRVAEAFTGAGEDGLLEFLEKVTLAAEEAGGEESEAVRLMTLHNANGLEFDVV
                     FLVGLEDGLLPHSRSVDSPHEIEEERRLFYVGLTRARERVFLSLARRRNMFGSYRDAV
                     PSRFLYDLPASLVRRTDGELPEPSRTEKGFSGGTGPVHRVTVSLEPRYETENPPARPR
                     KVRHPVFGEGKVEAIDGEGNDRKIIARFPVYGLKKILVRAVAMEFLE"
BASE COUNT          466 a          805 c          687 g          477 t
ORIGIN      
        1 cgccaagtgt gaacgcggtg accaaaccga tcacccagag gactagcaaa aggaccgcga
       61 ttgtccagag catttttcat cacctcctcc cgtcgtccag cgacatgcat tcgcaaagaa
      121 gtggtttcaa tctacgcgat agacagttat cactcgcatc ggtatctcct aaattctctg
      181 ctttatcaga cgataatcct gccggctgac cttcggtatc ggcttctgtc cgaaacgcga
      241 gtcgccgttt gtctgattct cggaccggtg tttgtcctat tttgaagggt atgggttgaa
      301 ggatatctcc ggaagaagga acccgggcgc gcctgaaaaa aagccccgac ttccggggat
      361 aggccgccga acaccattcc cgcaagaccg tgtgtgtgga atgcccaatc gtcagcacga
      421 tgagtgcgcc gaatgcgacc gggttcgctg gtggattcat atcaggatat cgcgctgccg
      481 gagtcaccct ttacagctac tggtagttcg tcattgtatg ttgactccta tcttcaacct
      541 actttttcca gagttgtgta cgtggtcaga aggaatggcg attttctagg cctgatttaa
      601 ggtccggttg cctgaccgcc aatcccgagg agccgtccca gaggtaccgg gacagccgct
      661 cgcggagaca gagccgcgcc cggtgcaggc gaaacttgat ggcggggacg gtgagcccga
      721 ggatcttggc cgtctcctcg ttcgacagcc cttccacgtc gctcaggatg aagacgaccc
      781 ggtacttctc ggaaagttcc tcggtgtatt tgcggatcat ccgccccagt tcctcgttga
      841 gcgcatcccg ttcgacctcc ttgctccagt cgtccatcgg agaggcgtgc atcccttcat
      901 cggtgaacac gggcatgaac tcctcgatcg aaacggtttc attccgccgc ttcccgcgaa
      961 ggcgcatgag gcaggtgttc acgcagatcc ggtagatcca cgagtagaag gcggagttcc
     1021 cctggaacgt tcccaccttc cggatcacgg tcatgaacac gtcctgcgcc gcttcctcgg
     1081 cgtcgctctc gttcttcagg atcgacatcg caaggttgaa gatcttcccc tggtacagcc
     1141 cgagcagctc gtcgaccgcg cccgggtccc ctttgcgaag gctctccaga agagcttcgt
     1201 cttccttcca ccgctcggcg gacatgcacg actccttctt tgattccgac tcccgggggg
     1261 agtttccgga atcctcccgg aaaaacaagg agtaccacgt ttctttccag aggcgcaagc
     1321 ccgggacccc cacattccgc ccaccggaag gaaacaccgt gaaaacatcg taatatcctt
     1381 ggcggaacgg atcggttcgc ttaaaatggg aaggtcggga accggcggaa gaaaggtccc
     1441 gcggagagaa acgacgtgaa aaaatgccac ctgacgctga tcgccttgat gaccgcaggg
     1501 acggcgacgt ttcttttcgc ccttctccgt cgacgggagg ctgcgccggc tacaccctac
     1561 gaccgtccca aagggggcga gcgggaaggc gacttcgaac tttttatcgg ttcctgatgt
     1621 ccgggaacct tcttccctac tccaggaact ccatcgccac agcgcgcacg aggatcttct
     1681 tcagaccgta gaccgggaac cgcgcgatga tcttccggtc gttcccttcc ccgtcgatcg
     1741 cctcgacctt cccttcgccg aacacgggat gcctcacctt gcgcggacgc gcaggcgggt
     1801 tctccgtctc gtagcgcggc tccagggaca cggtcacgcg gtggaccggc ccggttccgc
     1861 cggagaaccc cttttccgtc cgcgacggct ccgggagctc cccgtccgtc cgacgcacga
     1921 gggaggccgg aagatcgtag aggaagcggg acgggacggc gtcccggtag gaaccgaaca
     1981 tgtttctccg ccgggcgagc gacaggaaaa ccctctcccg cgcccgggtg agccccacgt
     2041 agaagaggcg ccgctcctcc tcgatctcat gcggggaatc gaccgaccgc gagtggggca
     2101 acaacccgtc ttccagaccg acgaggaaca cgacgtcgaa ctccagccca ttggcgttgt
     2161 gcagcgtcat caggcgcacc gcctcggact cctcgccacc cgcctcctcg gccgccagcg
     2221 tcaccttctc gaggaactcc aacagcccgt cctcccccgc ccccgtgaac gcctccgcca
     2281 cccggaggag ttcgcggacg tgctccaggt cctcctccct cccggcgccc tcgcgacctt
     2341 ctcccggttc ccgcgccgcc gcttccaggg cggcgaggta ccccgccccc gaaaggaggg
     2401 cgtgcagcgc ctcggcggga gacatctgcg gaagc
//
LOCUS       DATGYW010000699         1950 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_101939, whole genome shotgun sequence.
ACCESSION   DATGYW010000699 DATGYW010000000
VERSION     DATGYW010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101939"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VK429_09820"
     CDS             <1..328
                     /locus_tag="VK429_09820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92134.1"
                     /translation="GRRFDLVILDPPSFAKSREGREGALRGYRDINRMGLSVLSPGGF
                     LATSSCTQLIDATQWVDALRDAAADDGADLERIAWGGQAPDHPVLLSVPETDYLKFAV
                     YRKRLP"
     gene            325..1635
                     /locus_tag="VK429_09825"
     CDS             325..1635
                     /locus_tag="VK429_09825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011939755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nodulation protein NfeD"
                     /protein_id="HLN92135.1"
                     /translation="MTLSVTRTVITAIALLLSVPCVALPAGPVGKGVLVATIAAPIGP
                     VTADYLAAVIARADEEDAGLLVIELDTPGGLDSAMRQMVQAILKSRVPVAVYVSPQGA
                     RAASAGVLITLAADVAAMAPGTNIGAAHPVSMGGGAMDNTMSRKVENDAAAYARSLAA
                     GRGRNVDWAESAVRQSASLSEIDALDRKVVDLVAASLPDLLARIDGREVRKGDVTRIL
                     RTKGAPVTRVPMGLRHRILSSLADPNIAYILMMIGVYGIYFELASPGAVFPGVVGGIS
                     LLLGFYALQTLSANYAGFLLILLSVLLFFLELKIQSHGALAIGGIVAMVLGSLMLFRA
                     SADPFLRVSWTVLATMVALSAVFFAAVISLAVRSQLRKPSTGPEGMVGESGEAVSDID
                     PRGKVRVHGELWDARSDRPVRKGERVVVKGLDGMTLVVEPVNDR"
     gene            1676..>1950
                     /locus_tag="VK429_09830"
     CDS             1676..>1950
                     /locus_tag="VK429_09830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006423400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HLN92136.1"
                     /translation="MFVYAAALVLVLLFLSAAVKILNEYERGVVFRLGRVIGCKGPGL
                     ILLIPAIDKMIRVDLRVVAMDVPAQDVITRDNVTIKVSAVLYFRVIDP"
BASE COUNT          285 a          648 c          678 g          339 t
ORIGIN      
        1 cgggcggcgg ttcgaccttg tgatcctcga cccgccgtcg ttcgccaagt cccgcgaggg
       61 gagggagggg gcgcttcgag gataccggga catcaaccgg atggggctat cggtcctctc
      121 gcccggcggt tttctcgcca cctcgtcctg tacgcaactg atcgatgcga cgcaatgggt
      181 tgatgccctc cgggacgcgg cggccgatga cggcgccgac ctcgagagga tcgcgtgggg
      241 cgggcaggcg cccgatcacc cggtcctcct gtccgtcccc gagaccgact atctgaaatt
      301 cgccgtctac aggaagcgac tgccatgacc ctttccgtta cgcgtaccgt gatcaccgcg
      361 atcgcgcttc ttctctccgt tccgtgcgtt gcccttcccg ccgggcctgt ggggaaggga
      421 gtgctcgtgg cgacgatcgc cgccccgatc ggccccgtca cggcggacta cctcgccgcg
      481 gtcatcgccc gggcggacga agaggacgcg gggctcctcg tgatcgagct ggacaccccc
      541 ggagggctcg attccgcgat gcggcagatg gtgcaggcga tcctcaagag ccgggtcccc
      601 gtcgcggtgt acgtctcccc gcagggggcg cgggcggcgt ccgcgggagt gctgatcacg
      661 ctggcggcag acgtggcggc catggccccc gggaccaaca tcggcgcggc ccacccggtc
      721 agcatggggg gcggcgcgat ggacaacacg atgtcgcgga aggtggaaaa cgacgcagcg
      781 gcctacgcgc gctcgcttgc cgcgggccgg gggcgaaacg tcgactgggc ggagagcgcc
      841 gtgaggcaga gcgcctctct ctccgaaatc gacgccctcg acaggaaggt cgtcgacctg
      901 gtcgccgcgt cccttcccga tctgctcgcc cggatcgacg ggagggaggt tcgcaagggc
      961 gacgtgacga ggatcctccg gacgaagggt gcgccggtga cccgcgtgcc catggggctt
     1021 cgtcatcgca tcctgtcctc cctggcggat cccaacatcg cgtacatact catgatgatc
     1081 ggggtctacg ggatctactt cgagctggcc tcccccggcg cggtgttccc cggagtggtg
     1141 ggggggatct cgctgctcct cggcttctac gccctgcaga ccctctcggc gaactacgcc
     1201 ggctttctgc tgatcctcct ctccgtcctc ctcttcttcc ttgagctgaa gatccagtcg
     1261 cacggggcgc tggcgatcgg ggggatcgtc gcgatggtcc tggggagcct gatgctcttc
     1321 cgggcgagcg ccgacccgtt cctgcgcgtc tcctggaccg tgctggccac catggttgcg
     1381 ctgtcggcgg tattcttcgc agcggtcatc tcgctggccg tgcgcagcca gctccggaag
     1441 ccgtccaccg gtccggaggg gatggtcgga gagagcggtg aggcagtctc ggacatcgac
     1501 ccgagaggga aagtgcgcgt ccacggagag ctgtgggacg cccgcagcga tcggcccgtc
     1561 cgcaaggggg agcgggtggt cgtgaaaggc ctcgacggga tgacgctcgt cgtggaaccg
     1621 gttaacgatc gctgaccccg gggacgcaac ggggcggcac aaggaggatc gtcgaatgtt
     1681 cgtctacgca gccgcactgg ttctggtcct gctcttcctc tcggccgccg tcaagatcct
     1741 gaacgagtac gaacgggggg tcgtgttccg gctcgggcgc gtgatcgggt gcaagggccc
     1801 cggcctcatc ctgctcatcc ccgcgatcga caagatgatc cgggtggacc tgcgcgtcgt
     1861 ggcgatggac gtccccgcgc aggacgtcat cacgcgggac aacgtcacca tcaaggtgag
     1921 cgccgtcctg tatttccgcg tcatcgaccc
//
LOCUS       DATGYW010000700         2148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_367820, whole genome shotgun sequence.
ACCESSION   DATGYW010000700 DATGYW010000000
VERSION     DATGYW010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_367820"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            10..132
                     /locus_tag="VK429_09835"
     CDS             10..132
                     /locus_tag="VK429_09835"
                     /inference="COORDINATES: protein motif:HMM:NF012462.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uL22 family ribosomal protein"
                     /protein_id="HLN92137.1"
                     /translation="MKSACVNQGASQKRFRPAPMGRAHKYKRRTSHITIVVDEA"
     gene            165..821
                     /gene="rpsC"
                     /locus_tag="VK429_09840"
     CDS             165..821
                     /gene="rpsC"
                     /locus_tag="VK429_09840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002625383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HLN92138.1"
                     /translation="MGQKTHPYGFRLVSIRTWRSRWYSEKEYASQLQEDLRIRGFVKG
                     RLNHAGVASIEIERRSNRVNVLIATARPGIVIGKKGAEIENLKKEIQKLTPKEVSINI
                     IEIRRPETDGQLTAENVAMQLERRVAFRRAMKKTVLSSMKLGAKGIKIQVSGRLGGAE
                     MSRTEWYREGRVPLHTLRADIDYGFSEARTTYGIIGVKVWIYKGEVLPKAPSSPATNE
                     "
     gene            835..1245
                     /gene="rplP"
                     /locus_tag="VK429_09845"
     CDS             835..1245
                     /gene="rplP"
                     /locus_tag="VK429_09845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006928918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HLN92139.1"
                     /translation="MLAPKRVKFRKQMKGRRRGKAQSGNTLNFGEYGVKAVDAAWITS
                     RQIEAARIAMTRFIKRGGKIWIRIFPDKPITKKAAETRMGKGKGAPEEWVAVVRPGRV
                     LYEIEGVDEATAREAFRLAAHKLPIQTTFLSREA"
     gene            1252..1452
                     /gene="rpmC"
                     /locus_tag="VK429_09850"
     CDS             1252..1452
                     /gene="rpmC"
                     /locus_tag="VK429_09850"
                     /inference="COORDINATES: protein motif:HMM:NF013027.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HLN92140.1"
                     /translation="MKTKDVRDLGAEELRQKERELRDEIFRLKMKRAATALENKMQIR
                     NRRRDLARVVTFLHAKMEGKAN"
     gene            1472..1735
                     /gene="rpsQ"
                     /locus_tag="VK429_09855"
     CDS             1472..1735
                     /gene="rpsQ"
                     /locus_tag="VK429_09855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015719184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HLN92141.1"
                     /translation="MESRGARKKKVGTVVSDKMDKTVVVRVERLVPHDVYKKYVRRRV
                     TFKAHDEKNEFRVGDRVEIVETRPISKDKRWRVARLIERLAAE"
     gene            1764..2132
                     /gene="rplN"
                     /locus_tag="VK429_09860"
     CDS             1764..2132
                     /gene="rplN"
                     /locus_tag="VK429_09860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012565943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HLN92142.1"
                     /translation="MIQMQTMLDAADNSGAKRLCCIKVLGGSRRRYAGVGDIIVVSVK
                     EAIPNGKVKKGDVHKAVVVRTVKEIGRADGSFLRFDQNSAVLVNPQGEPIGTRIFGPV
                     ARELRARKYMKIISLAPEVL"
BASE COUNT          483 a          622 c          726 g          317 t
ORIGIN      
        1 acgctctacg tgaagagcgc gtgcgtgaac cagggggcct cgcagaaacg gtttcgtccg
       61 gcaccgatgg gaagggcgca caagtacaag cggcggacca gtcacataac gatcgtggtc
      121 gacgaggcct gattcgtcag gcgaatttca ccaggaggcg gattttggga cagaagacac
      181 acccttacgg atttcggctg gtatccatcc ggacctggcg ctcgcgctgg tactccgaaa
      241 aggagtacgc gtcccaactg caagaggacc tgaggatccg cggcttcgtc aagggccgcc
      301 tgaaccacgc gggggtcgcc tcgatcgaga tcgagcggcg cagcaaccgc gtcaacgttc
      361 tcatcgccac ggcccgtccg gggatcgtga tcggcaagaa gggcgccgag atcgaaaacc
      421 tcaagaagga gatccagaag ctcacgccga aggaagtgtc gatcaacatc atcgaaatcc
      481 gccgtccgga aacggacggc cagctgaccg ctgaaaacgt agcgatgcaa ctggagcggc
      541 gtgtcgcttt ccgccgcgcc atgaagaaga ccgtgctttc ctcgatgaag ctgggcgcca
      601 aggggatcaa gatccaggtc tccggccgcc tcggcggcgc cgagatgtcc cggaccgagt
      661 ggtaccgcga agggcgggta cctcttcaca ccttgagggc cgacatcgac tacggtttct
      721 cggaagcccg caccacctac gggatcatcg gggtgaaggt ctggatctac aagggcgagg
      781 tgctgccgaa ggcgccctct tcccctgcca ccaacgaata ggagatcggg aatcatgctc
      841 gcccccaaaa gggtcaagtt ccgcaagcag atgaagggcc gacgccgtgg aaaggcgcag
      901 tccgggaaca cgctcaactt cggcgaatac ggcgtaaagg ccgtagacgc ggcatggatc
      961 acctcccggc agatcgaggc ggcgcggatc gcgatgacac gcttcatcaa gcgcggcggg
     1021 aagatctgga tccggatctt tcccgacaag ccgatcacga aaaaggcggc ggagacccgg
     1081 atggggaagg gtaagggagc acccgaggag tgggtcgccg tggtccgccc gggccgtgtt
     1141 ctctacgaga tcgagggagt cgacgaggcc acggcgcggg aggcgttccg cctggcggcc
     1201 cacaagctcc cgatccagac gacattcctg tccagagagg catagacgtc catgaagacg
     1261 aaggatgtgc gggatcttgg ggctgaggaa ctccgccaga aggagcggga gttgcgggac
     1321 gagatcttcc gcctgaagat gaagcgcgcc gcgaccgctc tcgagaacaa gatgcagatc
     1381 cgcaaccggc gcagggacct ggcccgcgtg gtcacgttcc tccacgcgaa gatggaaggg
     1441 aaggcgaact gacatgacgg cggagggtgc gatggaatcc cgcggtgcgc ggaaaaagaa
     1501 ggtggggacg gtcgtcagcg acaagatgga caagaccgtg gtcgtacgcg tggagcgcct
     1561 ggtcccgcac gacgtctaca agaaatacgt gaggcgccgc gtcaccttca aggcgcacga
     1621 cgagaagaac gagttccggg tcggggaccg cgtcgagatc gtcgagacgc ggccgatcag
     1681 caaagacaag cggtggcgcg tagcccggct gatcgagcgc ctcgccgcgg agtgatccgt
     1741 aaaattccgg cggagatgat gaaatgatcc agatgcaaac catgctcgac gcggccgaca
     1801 actcgggtgc gaagcgactt tgctgcatca aggtgcttgg cggcagccgg cgccggtacg
     1861 ccggcgtggg tgacattatc gtcgtcagcg tgaaggaggc gatccccaac ggcaaggtca
     1921 agaaggggga tgtccacaag gcggtcgtcg tccgcaccgt aaaggagatc ggccgggccg
     1981 acggaagctt ccttcgcttc gaccagaatt ccgccgttct cgtcaatccc cagggcgagc
     2041 cgatcgggac ccgcatcttc ggacccgtcg cccgcgaatt gcgcgcaagg aagtacatga
     2101 agatcatctc cctggcgccg gaagtcctgt gagcaggagg ggcggaat
//
LOCUS       DATGYW010000701         1998 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_102505, whole genome shotgun sequence.
ACCESSION   DATGYW010000701 DATGYW010000000
VERSION     DATGYW010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102505"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1300)
                     /locus_tag="VK429_09865"
     CDS             complement(<1..1300)
                     /locus_tag="VK429_09865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010943068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nodulation protein NfeD"
                     /protein_id="HLN92143.1"
                     /translation="MTFTVRRMLISAVVFLLAVPGVSLSAGPAGKEVLVATIAAPIGP
                     VTADYLSSIIARAEEEDAALVVVELDTPGGLDSAMRQMVQAILKSRVPVAVYVYPQGA
                     RAASAGVLITLAADVAAMAPGTNIGAAHPVNMGGGAMDNTMSKKVENDAAAYARSLAA
                     GRGRNVEWAESAVRESSSLSEKDALEKNVVDLVAASLPDLLARIDGREIRKGDETVIL
                     RTKGAPVTRVPMGLRHRVLSALADPNIAYILMMIGVYGIYFELASPGAVLPGVVGGIC
                     LLLGFYALQTLSANYAGFLLILLSLLLFFLELKIQSHGALAIGGIVAMALGSLMLFRE
                     SADPYVRVSWTVLGTMVALSAVFFAAVISLAVRSQLRKPSTGSEGMIGEIGEAVTDID
                     PKGKVHVVGELWDARSDRPVRKGEPVVVKGLDGMTLVVEGK"
     gene            complement(1297..>1998)
                     /locus_tag="VK429_09870"
     CDS             complement(1297..>1998)
                     /locus_tag="VK429_09870"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HLN92144.1"
                     /translation="HEGLAERKGPARGAGSTREEIETDGVRFSVDVETGPKTGFFLDQ
                     RGNRGIVRDLARGKTVLDGFCAAGGFGLYALAGGATNVLAIDSSRPAVETARANAALN
                     GVSARWEGEAEDLFRALRNLRDVGRRFDIVILDPPSFAKSREGREGALRGYRDINRMG
                     LSVLSPGGVLATSSCTQLIDGTQWVEALRDAAADAGADLERIAWGGQPPDHPALLSVP
                     ETDYLKFAVYRKRLP"
BASE COUNT          332 a          726 c          640 g          300 t
ORIGIN      
        1 tcttcccttc gacaacgagc gtcattccgt cgaggccttt cacgaccacc ggctccccct
       61 tgcggacggg ccgatcggac ctggcgtccc acagctctcc gacgacgtgc accttccctt
      121 tcgggtcgat gtccgtgacc gcctccccga tctccccgat catcccctcc gaaccggtgg
      181 agggcttgcg gagctgactg cgcacggcga gcgagatgac cgcggcgaag aagaccgccg
      241 acagcgcgac catggttccc agcacggtcc aggagacgcg cacgtacggg tcggcgctct
      301 cccggaagag catcaggctc ccgagggcca tcgcgacgat cccgccgatc gccaacgccc
      361 cgtgcgactg aatcttcagc tcgaggaaga agagaaggag agagaggagg atcagcagga
      421 agccggcgta attcgccgag agggtctgca gggcgtagaa ccccaggaga aggcagatcc
      481 ctcccaccac tccgggaagc accgcgccgg gggaggccag ctcgaagtag atcccgtaga
      541 ccccgatcat catcaggatg taggcgatgt tggggtccgc cagggcggac aggacgcgat
      601 ggcgaaggcc catgggcacg cgggtcaccg gcgccccctt cgtccgcagg atcaccgtct
      661 cgtcgccctt ccggatctcc ctcccgtcga tccgggcgag caggtcggga agggaggcgg
      721 cgaccaggtc gacgacattc ttttccaggg cgtccttttc cgagagggag gagctctccc
      781 gcacggcgct ctccgcccac tcgacgttcc gcccccggcc cgcggccagc gagcgtgcat
      841 aggccgcggc gtcgttttcc accttcttcg acatcgtgtt gtccatcgcg ccgcccccca
      901 tgttgaccgg gtgcgccgcg ccgatgttgg tccccggggc catggccgcc acatcggccg
      961 ccagcgtgat cagcaccccg gcggacgccg cgcgcgcgcc ctgtgggtag acgtacaccg
     1021 cgacggggac ccggctcttg aggatcgcct gcaccatctg ccgcatcgcg gaatcgagcc
     1081 cgcccggcgt gtcgagttcg accacgacga gcgccgcgtc ctcttcctcc gccctcgcga
     1141 tgatcgaaga gaggtagtcc gccgtgacgg ggccgatcgg ggcggcgatg gtggccacga
     1201 gcacctcctt acccgccggc cctgcggaaa gggagacccc cggaacggcg aggagaaaca
     1261 cgaccgcgga gatcagcatg cgtcgaacgg taaatgtcat ggcagtcgtt tcctgtagac
     1321 ggcgaatttc aggtagtcgg tttcgggaac ggacaggagc gccgggtgat cgggcggctg
     1381 tcccccccac gcgatcctct cgaggtcggc gccggcgtcg gccgccgcgt cccggagggc
     1441 ctcgacccat tgcgtaccgt cgatcaactg ggtgcaggac gaagtggcga gaacgccacc
     1501 gggagagagg accgaaagcc ccatccggtt gatgtcccgg tatccccgca atgccccctc
     1561 cctcccctcc cgggacttcg cgaacgacgg cgggtcgaga atcacgatgt cgaaccgccg
     1621 cccgacgtcc ctcaagttcc gcagcgcccg gaagagatcc tcggcctccc cctcccaccg
     1681 tgccgaaacg ccgttcaacg cggcgttcgc gcgcgcggtc tcgacggccg ggcgcgagga
     1741 gtcgatcgca agaacgttcg tcgccccccc ggcgagggcg tacaggccga accctccggc
     1801 ggcgcagaag ccgtcgagca cggtcttccc ccttgccagg tcgcggacga tgccccgatt
     1861 cccacgctgg tcgaggaaga agcccgtctt cggccccgtc tccacgtcca cggaaaaccg
     1921 gacaccgtcc gtttcgatct cctcccgggt cgagcctgcc ccgcgtgcgg gccctttccg
     1981 ctccgccagt ccttcgtg
//
LOCUS       DATGYW010000702         2483 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_102561, whole genome shotgun sequence.
ACCESSION   DATGYW010000702 DATGYW010000000
VERSION     DATGYW010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2483)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2483)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2483
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102561"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1322)
                     /locus_tag="VK429_09875"
     CDS             complement(<1..1322)
                     /locus_tag="VK429_09875"
                     /inference="COORDINATES: protein motif:HMM:NF028228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLN92145.1"
                     /translation="MRNIVATGGLALLLFLAPAGAPNGVAAPIPRPDSRGYTYFLSGY
                     LDFREGNLDAALGSYRKALKYAGDEPDILYEIANVLVKKGRLPEARVELEKALAIDGG
                     HTQSRYLLAGILAASGEREKAMAEYDRVLKEDPENEDTYLHIATLHAERGEFSKAEEV
                     LGALIARDPDSHLAYYYRGRVRAAQKKFEEALADYDKVLAIAPGFDAALLESAAVLEI
                     LGRNAEAEERYRTALHASPNNQFIRDRLGRLLIREKKIDQAVDQYEEMKKFSAANTDV
                     RTKLGLLYLDRDRFDDAINEFTFVLASEPENTQVRFFLGTAYEEKGALPEAEAAFRKI
                     QEGDPVHREAMLHLAMLLSRQKKYDEAIEIVRKLREKSPGDVELMIFLAGQLEGAKRY
                     DEALAVATEATEKAPENPAAWFAVGVVQDKRGKLEEVIAAMEKVIALDP"
     gene            1393..>2483
                     /locus_tag="VK429_09880"
     CDS             1393..>2483
                     /locus_tag="VK429_09880"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HLN92146.1"
                     /translation="MPEAAALSELPLSRILSALLSRGGEHGELFFEESRSLTVLMEDG
                     RIERVVSGTDAGIGVRLLFRGRTFYAYTNDRSAGSLLALSNDLSRYAEGDGVAAALPA
                     SAQAARGPTVVRVPPAARGIGEKVAVVREVDRIARGFSREVRQVRVTWSESLRRIEVG
                     AHPGVFVREGQTYCVLAVQAVAGDDGGLTMGYESAGGTEGLEFLDGGVPELLARKAAG
                     RAVRALHAAKLPGGRMPVVLSSEAGGTMVHEAVGHGLEADLARRGMSVYKEKLGERIG
                     SLLVSIADDATVPGKRGSFGIDDEGTPGQRTLLVDAGILKGFLHDRLSAMKDGVAPTG
                     NGRRESYRHKPIPRMSNTLILPGDTPPGE"
BASE COUNT          379 a          809 c          852 g          443 t
ORIGIN      
        1 gggtcgaggg cgatcacctt ctccatggca gcgatcacct cctcgagctt gccccgcttg
       61 tcctggacca ccccgacggc gaaccaggcg gcggggtttt ccggagcctt ttctgtcgcc
      121 tcggtggcga cggccagcgc ctcgtcgtac cgtttcgccc cctcgagctg gccggcgagg
      181 aagatcatca actccacgtc cccggggctc ttctcccgaa gcttccggac gatctcgatc
      241 gcctcgtcgt actttttctg ccgcgacagg agcatcgcga ggtgaagcat cgcctcccgg
      301 tgcaccgggt cgccctcttg aatcttccgg aacgccgcct cggcctccgg caaggcgccc
      361 ttctcttcgt acgccgtccc caggaagaag cgcacctgcg tgttttccgg ttcggaggcg
      421 aggacaaagg tgaactcgtt gatcgcgtca tcgaaccggt cgcgatcgag gtagagaagg
      481 ccgagcttcg tgcggacgtc ggtgttggcg gcggagaact tcttcatctc ctcgtactgg
      541 tccaccgcct ggtcgatctt cttctcccgg atcagcaggc ggccaagccg gtcacggatg
      601 aactggttgt tcggggaagc gtgaagtgcg gttctgtacc gctcctccgc ctccgcgttc
      661 cggccgagga tctcgagaac cgcggcggac tcgagaagcg ccgcgtcgaa gcccggtgcg
      721 atcgcgagta ccttgtcgta gtcggcaagg gcctcctcga acttcttctg ggccgcgcgg
      781 acgcgaccac ggtaatagta ggccaggtgg gaatcggggt cccgggcgat cagggcgccg
      841 agaacctcct cggccttgga aaattccccc cgctccgcat ggagggttgc gatgtggagg
      901 tacgtgtcct cgttctccgg gtcctccttc aggacacggt cgtattcggc catggccttt
      961 tcgcgttcgc ccgaggcggc gaggatcccc gccagaagat accgcgattg cgtgtgcccc
     1021 ccgtcgatcg ccagcgcctt ttccagctcc acccgggcct cgggaagccg tcccttcttc
     1081 acgaggacgt tggcgatctc gtagaggatg tccggctcgt cccctgcgta cttcagcgcc
     1141 ttcctgtacg acccgagagc ggcgtcgaga ttcccctccc ggaagtcgag atatccggaa
     1201 agaaagtagg tgtagccccg ggaatcgggg cgggggatcg gtgcggcaac cccgttggga
     1261 gctcccgccg gggcaagaaa aagaaggagg gccagccccc ccgtggcgac gatgttccgc
     1321 atccgttcct ccggataaat atcgaccgtt tgtattatat actcactacc cgtgaaaccg
     1381 cgaggaggac cgatgcccga agccgctgcg ctctccgaac tgcccctttc gagaatcctg
     1441 tcggcgctgc tgtcccgcgg aggggagcac ggggagctgt ttttcgagga atcccggtcc
     1501 ctcacggtcc tcatggagga cggccggatc gaacgggtcg tttcggggac cgacgcgggg
     1561 atcggcgttc gcctcctctt ccgcggcaga acgttttacg cctacacgaa cgaccggtcg
     1621 gccggatccc ttctcgctct ttcgaacgac ctctcccgct acgcggaagg ggatggcgtc
     1681 gccgcggcgc ttccggcatc ggcacaggcg gcccgcgggc cgaccgtcgt ccgtgtgccg
     1741 ccggccgcgc ggggcatcgg cgagaaggtc gcggtggtgc gggaagtcga ccggatcgcg
     1801 agggggttct cgcgggaggt gcggcaggtc cgggtgacct ggtcggaatc gctgcgccgc
     1861 atcgaggttg gcgcccaccc cggcgtcttc gttcgcgagg ggcagacgta ttgcgttctc
     1921 gccgtccagg ccgtggcggg cgacgacggc gggttgacga tgggatacga atccgcgggc
     1981 gggaccgagg ggctcgagtt cctcgacggg ggggttccgg agctgctggc ccgcaaggcc
     2041 gcagggaggg cggtgcgggc gctccacgcg gcgaagctcc ccggggggcg gatgccggtc
     2101 gtactctcct ccgaagcggg aggcacgatg gttcacgagg cggtcgggca cggcctggag
     2161 gcggatctcg cccggcgcgg gatgtcggtc tacaaggaga agctggggga gcgcatcggg
     2221 agcctgctgg tttccatcgc cgacgacgcc accgtcccgg ggaagcgcgg ttcgttcggg
     2281 atcgacgacg aagggacgcc cgggcagcgg accttgctgg tcgacgcggg gatcctgaag
     2341 ggatttctcc acgaccgtct gtccgcgatg aaggatggcg tcgcccccac ggggaacggc
     2401 cggcgggagt cgtaccgtca caaaccgatc ccgcgcatgt cgaacacgct catcctgccc
     2461 ggcgacacgc cccccgggga gat
//
LOCUS       DATGYW010000703         2528 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_159774, whole genome shotgun sequence.
ACCESSION   DATGYW010000703 DATGYW010000000
VERSION     DATGYW010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159774"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VK429_09885"
     CDS             complement(<1..321)
                     /locus_tag="VK429_09885"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011165450.1"
                     /note="part of NADH-ubiquinone oxidoreductase complex I;
                     shuttles electrons from NADH, via FMN and iron-sulfur
                     (Fe-S) centers, to quinones in the respiratory chain; NuoF
                     is part of the soluble NADH dehydrogenase fragment, which
                     represents the electron input part of NADH dehydrogenase;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit F"
                     /protein_id="HLN92147.1"
                     /translation="MEKVLTTHFANERYRRLDTYRQYGGYEALKKAFAMTPEAIIDEV
                     KKANLRGRGGAGFPAGVKWGFLPKDLSQPRVLVINADEGEPGTFKDRVIMSRGPHLMI
                     EGIVI"
     gene            complement(341..814)
                     /gene="nuoE"
                     /locus_tag="VK429_09890"
     CDS             complement(341..814)
                     /gene="nuoE"
                     /locus_tag="VK429_09890"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000540770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HLN92148.1"
                     /translation="MSVAFSETGRAQFERLLTRYPDRKAVILPALHLAQKEFGYVSDE
                     AIVYIAGLVGASPAEIEGIATFYTMYNRKPVGKYHVQICRNISCSLLGAEHLIEHVSK
                     KLGVRPGETTPDGKFTLTKVECLGSCGTAPVMQVNDEYHENLTVESIDRILDGLP"
     gene            complement(811..2028)
                     /gene="nuoD"
                     /locus_tag="VK429_09895"
     CDS             complement(811..2028)
                     /gene="nuoD"
                     /locus_tag="VK429_09895"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017951953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HLN92149.1"
                     /translation="MAEPVDITTKGGTPDLQAEPMLINIGPSHPATHATLRFQATLDG
                     ETILDLEPEFGYLHRGFEKESEASTWTQVVPYTDRLNYVSPLMNNVGYAMAVEKLCGI
                     EITERCKYVRVIISELSRIIDHMVCIGTNMVDLGALTNFWYFWKPREEVYFLIEELCG
                     QRLTTSYTRIGGAMADLPEGWTDRLLAVCRGVIPECIADVNALLTKNRIFIERTMGAG
                     PITAKDAIALGFTGPCLRAAGVPLDLRKDEPYLVYDRFDFDVPVGEAGDTCDRYMVRM
                     EEMRQSLRIIEQAIAKLPGGPINIDDPRFILPPKAQVYENIEALMNHFKFIMEGVKVP
                     AGEVYSATEAANGELGFYIVSRGGGGPYKIKVRPPCFPLFQGIPHLVKGQMIADLIAV
                     LGSVNIIAGELDR"
     gene            complement(2036..>2528)
                     /locus_tag="VK429_09900"
     CDS             complement(2036..>2528)
                     /locus_tag="VK429_09900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005009503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HLN92150.1"
                     /translation="GSGSGVSIVLDRLRERFPADVVSTHSNFGDDTALVRRERIVEIL
                     TFLRDDPELLFDFAMDLTGVDYLGEEPRFEVVYHLYSLEKKRRVRIKVRLHEDDPVVD
                     TAVSVWPGINWYEREAWDMYGIVFRGHPNLKRILMYEAFEGHPLRKDYPKAKRQPTIG
                     PEE"
BASE COUNT          389 a          870 c          805 g          464 t
ORIGIN      
        1 gatgacgatc ccctcgatca tgaggtgcgg cccgcggctc atgatgaccc ggtccttgaa
       61 ggtcccgggc tccccctcgt ccgcgttgat caccagcacg cggggctggg agaggtcctt
      121 cgggaggaac ccccacttga cccccgccgg gaacccggcg ccgccgcggc cgcgaaggtt
      181 cgccttcttc acctcgtcga tgatcgcctc gggcgtcatc gcgaaggcct ttttcaacgc
      241 ctcgtagccc ccgtactgcc ggtacgtgtc cagccggcgg taccgctcgt tggcgaagtg
      301 cgtggtgagg accttttcca tggccgcgtg cgtcatcccc tcacgggagt ccgtcgagga
      361 tccggtcgat cgactcgacg gtcaggttct cgtggtactc gtcgttcacc tgcatcaccg
      421 gcgcggtgcc gcaggacccc aggcactcca ccttcgtcag ggtgaacttc ccgtccgggg
      481 tcgtctcccc gggccggacg ccgagcttct tcgacacgtg ttcgatcagg tgctccgccc
      541 cgaggaggga gcaggagatg ttccggcaga tctgcacgtg gtacttcccc acgggcttcc
      601 ggttgtacat cgtgtagaag gtggcgatcc cctcgatctc cgcgggagag gcgcccacca
      661 gcccggcgat gtagacgatc gcctcgtcgg agacgtagcc gaactccttc tgcgccaggt
      721 gaagggcggg caggatcacc gccttcctgt cggggtagcg ggtcagcaga cgctcgaact
      781 gcgcgcgccc ggtctcggaa aaggcgacgc tcaccggtcc agctcccccg cgatgatgtt
      841 gacgcttcca agaacggcga tgagatccgc gatcatctgt cccttcacga ggtgcgggat
      901 cccctggaac agcgggaagc acggcggccg gaccttgatc ttgtaaggcc ccccgccccc
      961 cctgctcacg atgtagaacc cgagctcccc gttggccgcc tcggtcgccg agtagacctc
     1021 gccggccggg accttgaccc cttccatgat gaacttgaaa tggttcatca gcgcctcgat
     1081 gttctcgtag acctgcgcct tgggaggcag gatgaaccgg gggtcgtcga tgttgatggg
     1141 gccgccggga agctttgcta tggcctgctc gatgatccgg agcgactgcc gcatctcctc
     1201 catgcgcacc atgtaccggt cgcacgtgtc gccggcctcg ccgacgggca cgtcgaagtc
     1261 gaaccggtcg tagacgaggt acggctcgtc cttccgcagg tcgaggggga cccccgccgc
     1321 ccgcaggcac gggccggtga agcccagggc gatcgcgtcc ttcgccgtga tcggcccggc
     1381 gcccatcgtc cgctcgatga agatccggtt cttcgtgagg agggcgttca cgtctgcgat
     1441 gcactcgggg atcacgccgc ggcagaccgc gaggagccgg tcggtccacc cctccggcag
     1501 gtccgccatc gccccgccga tccgggtgta cgacgtggtc agccgctggc cgcacagctc
     1561 ctcgatcagg aagtagacct cctcgcgcgg cttccagaag taccagaagt tcgtcagcgc
     1621 gccgaggtcg accatgttcg tcccgatgca caccatgtgg tcgatgatcc gggagagctc
     1681 cgagatgatg acgcggacgt atttgcaccg ctccgtgatc tcgatgccgc acagtttctc
     1741 caccgccatc gcgtacccga cgttgttcat cagcggcgag acgtagttca gccggtcggt
     1801 gtacgggacg acctgggtcc aggtggaggc ctcggactcc ttctcgaacc cgcggtgcag
     1861 gtatccgaac tccggctcca ggtcgaggat cgtctcaccg tccagcgtcg cctggaaccg
     1921 cagggtcgcg tgcgtcgcgg ggtgggacgg accgatgttg atgagcatcg gctcggcttg
     1981 caggtcgggc gtcccgccct tcgtcgtgat gtcgaccggt tccgccatcg gtttcctact
     2041 cctccggccc gatcgtgggc tggcgcttcg ccttcggata atccttgcgc aacgggtgcc
     2101 cctcgaacgc ctcgtacatc aggatcctct tcaggttcgg gtggccgcgg aagacgatgc
     2161 cgtacatgtc ccacgcctcc cgctcgtacc agttgatccc gggccacacg gagacggccg
     2221 tgtcgaccac cgggtcgtct tcgtggagcc gcaccttgat ccggacgcgg cgcttcttct
     2281 ccagcgagta aaggtggtag accacctcga accggggctc ctccccgagg tagtcgacgc
     2341 cggtcagatc catcgcgaag tcgaagagca gctccgggtc gtcccgcagg aacgtgagga
     2401 tctcgacgat ccgctcccgc cgcaccaggg ccgtgtcgtc cccgaagttc gagtgggtgg
     2461 acaccacgtc ggccgggaac cgctcccgca gcctgtcgag gacgatgctc acgccgctgc
     2521 ccgaccct
//
LOCUS       DATGYW010000704         1568 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_368326, whole genome shotgun sequence.
ACCESSION   DATGYW010000704 DATGYW010000000
VERSION     DATGYW010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368326"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..1136)
                     /locus_tag="VK429_09905"
     CDS             complement(156..1136)
                     /locus_tag="VK429_09905"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006405037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003960 - NADPH:quinone reductase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase family protein"
                     /protein_id="HLN92151.1"
                     /translation="MKALLCTAFGPLEQLAIREIQPPRPGPGQVLIDVKAASLNFPDA
                     LMAQGLYQVKPPLPFSPGTEIAGVIVEAGGDVRGFRTGDRVIAIAGWGGFAEECAVDA
                     GRVTPLPGSMDFETGAAFLYTYETSLHALRDRGRLEAGETLLVLGAAGGVGLAAVEIG
                     KAMGARVFAAASSEDKLALCREHGADETINYVSGILRDRVKELTGGKGVDVVYDPVGG
                     PYTESALRATAWGGRLLVIGFAAGDIPKIPINLALLKERSIVGVYWGESVKHDPEGHV
                     RNVQQLMEWFAAGKVRPSITERVPLSEAAAAMERLVHRQVKGKVVVLPEA"
     gene            complement(1191..>1568)
                     /locus_tag="VK429_09910"
     CDS             complement(1191..>1568)
                     /locus_tag="VK429_09910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92152.1"
                     /translation="FVDYPVHPETFNFIPYNLSFIVREKAKYIEIREAMAILARKTKE
                     PTPEDVQAAVSPLGVKYVPLNYVDVMAGMQYFNTIIKKFKVPGTPSVVVLDSRNGKTK
                     TLYGILEITSDNILKAVAEVSGK"
BASE COUNT          284 a          498 c          480 g          306 t
ORIGIN      
        1 gttccgatcg ctgtttgcgc cgtctcaaaa tcccgtgttc gcaaggacgt gagggttcgc
       61 cccttcctcc ggcagccagg taatccgcag ggctggcagt gatccgttgt cagccctttt
      121 ttattgcatc ggtgttcgga agaggatcta ccggatcagg cttcgggcaa tacgacgact
      181 ttccccttca cctgacggtg aacaaggcgc tccatcgcgg ccgcggcttc gctcaaagga
      241 acccgttcgg tgatggatgg cctcaccttg ccggccgcga accattccat caattgctgc
      301 acgtttcgca cgtgcccttc ggggtcgtgc ttgaccgatt caccccagta gacgccgaca
      361 atggagcgtt ccttgaggag agcgagattg atcgggatct tcgggatgtc cccggcggcg
      421 aacccgatca ccaggaggcg cccgccccag gccgtggcgc gcagggcgct ctcggtgtag
      481 gggccgccca cgggatcgta gactacgtcc acgcctttgc cgcccgtcag ttccttgacg
      541 cgatcccgca gaatcccgga gacgtagttg atggtctcat cggcgccgtg ctccctgcac
      601 agggccagct tgtcctcgct ggaggcggcc gcaaaaacgc gggcgcccat ggccttgccg
      661 atctcgacgg ctgcaaggcc gacgccgccc gcggcgccca gcaccagcaa ggtttcgccg
      721 gcctcgagac ggcccctgtc ccgcaaggcg tggagggacg tttcataggt gtaaaggaac
      781 gcggcgccgg tttcgaagtc catactgccg ggcagcggcg tcacccgccc cgcgtccacg
      841 gcgcactctt cggcaaaacc gccccagccg gcgattgcga tgaccctgtc gcccgtccgg
      901 aaaccccgca catcccctcc ggcctcgacg atcacgcccg cgatttcggt accaggcgaa
      961 aagggaagcg gcggcttcac ctggtagagc ccctgcgcca tcaaggcatc ggggaagttg
     1021 agcgaggcgg cctttacgtc gatcaggacc tggccgggac cggggcgcgg gggctggatc
     1081 tcacgtatcg caagttgttc cagcgggccg aaggcggtgc acaggagcgc tttcatgttt
     1141 ccctcacggg gtcaccatcg ccgaagcggg atccttgcag atgggcgacg ctactttccc
     1201 gagacctccg ccacggcttt caggatgttg tctgaagtga tttcaagaat gccgtacaag
     1261 gtcttcgtct tcccgttacg cgaatcgagc acgaccacgg aaggggtgcc cgggaccttg
     1321 aacttcttga tgatggtgtt gaaatactgc atgccggcca taacgtccac gtaattcaac
     1381 gggacatact tcacgccgag gggggaaacc gccgcctgga catcctccgg cgtaggttcc
     1441 tttgttttcc gcgcaaggat cgccatggct tcccggatct cgatatattt cgccttctcg
     1501 cggacgatga aagacaagtt gtagggaatg aagttgaagg tttccgggtg gaccgggtaa
     1561 tccacgaa
//
LOCUS       DATGYW010000705         2207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_368389, whole genome shotgun sequence.
ACCESSION   DATGYW010000705 DATGYW010000000
VERSION     DATGYW010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368389"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..645)
                     /locus_tag="VK429_09915"
     CDS             complement(22..645)
                     /locus_tag="VK429_09915"
                     /inference="COORDINATES: protein motif:HMM:NF019958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HLN92153.1"
                     /translation="MARRGPNSGREKRDRILRAAVKIFSRKGFFNSKVSEIARAAEVA
                     DGTIYLYFRNKDDLLISLFEEKMGEVVADVRRRIANGGNALEKLKIFIENHMDLLERE
                     AGLVEVLQVELRQSTKFLKDYTPVKFFEYLEIISDILEEGRREGVLRPDLNISIARRA
                     IFGALDELSLTYILSRKPKYHPSVTAAELCRLLLEGLCVPGAAAGKG"
     gene            complement(754..1533)
                     /locus_tag="VK429_09920"
     CDS             complement(754..1533)
                     /locus_tag="VK429_09920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012529092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HLN92154.1"
                     /translation="MVRRDKSNYIIQSVAHALDVLEEFRDETEELGVTELSKKLKLHK
                     NNVFRILATLQSRSYIEQNRANDNYRLGIKCLELGQTFIHQRGLLKQARPILQELAET
                     TGETSYISILRGNEVVYLDSVETSSTVRVISRVGLHMPIHATAAGKALVSYDSDDELR
                     KLFSGGLPRFTKATRTDVDVFIEEVALIRERGYAIDLEEFEEGLRCIGAPVRDYTRKV
                     VGAISVSGPAHRLSDERIAAVIGPELDRAGKALSARLGFRE"
     gene            complement(1660..>2207)
                     /locus_tag="VK429_09925"
     CDS             complement(1660..>2207)
                     /locus_tag="VK429_09925"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLN92155.1"
                     /translation="RLALLLSLAVLLSVSGCKKKQPPAPAGEGEPIRLNAAADIENYK
                     EILRKDPNNLQALIGIGNLYFDTNRDLLAIENYRKALALDPTNANVRTDMAVCYRRSG
                     NPARAVEELKRAISTSPRHAQSRYNLGVILIQDMHDTEGGIKAWEALLENIPDYPYRD
                     SLKAEIARMRSAHGSGKQVFK"
BASE COUNT          383 a          682 c          671 g          471 t
ORIGIN      
        1 ggatcgaacc ctaccatgcg gtcagccctt ccccgcggcc gcaccgggca cgcacagccc
       61 ctccagcagg agccggcaca gctcggcggc ggtcacgctc ggatgatact tcggtttcct
      121 cgagaggata tacgtgaggg acagctcgtc cagcgcgccg aagatggcgc gccgcgcgat
      181 gctgatgttc aggtcggggc ggaggacccc ctctctcctg ccctcttcga ggatgtcgct
      241 gatgatctcg aggtactcga agaacttgac cggggtgtaa tccttcagga acttggtgct
      301 ctgccgcagc tccacctgga ggacctcgac gagcccggcc tcgcgttcca ggagatccat
      361 gtggttctcg atgaagatct tcagcttttc caaggcgttt ccgccattgg cgatccgccg
      421 gcgaacgtcc gccaccacct cccccatctt ctcttcgaac agggagatca acaggtcgtc
      481 cttgttcctg aagtagaggt agatggtccc gtccgccact tcggcggccc gggcgatctc
      541 ggataccttc gagttgaaaa accctttccg ggagaagatc tttacggcgg cgcgaaggat
      601 ccggtcccgt ttctctcgac cgctgttcgg tcccctcctt gccatcgcgc cctccccttg
      661 tgaatgaata accattcact caggaaggta cctttcctcc ataggcatgt caaggcgagg
      721 cgattcggcg aaacgacctt ccggcgattc ccgctattcg cggaagccga ggcgcgccga
      781 gagggccttc cccgcccgat cgagctcggg gccgatcacg gcggcgatcc tctcgtcgga
      841 tagccggtgc gccgggccgg acacgctgat cgcgccgacg accttgcggg tgtagtcccg
      901 cacgggggcg ccgatgcagc gcagcccctc ctcgaattcc tcgagatcga tggcgtagcc
      961 gcgctcccgg atgagcgcga cctcctcgat gaagacatcg acatcggtcc gggtggcctt
     1021 cgtgaagcgg ggcagcccgc cggagaacaa cttccgcaat tcgtcgtcgg agtcgtagga
     1081 aaccagggcc ttccccgcgg cggtggcgtg aatcggcatg tgcaggccga cgcgggagat
     1141 gacgcggacg gtggaggagg tttccaccga gtcaaggtag accacctcgt tcccccgaag
     1201 gatggaaatg tagctcgttt cccccgtggt ctcggcgagt tcctgcagta tcggtcttgc
     1261 ctgtttcagc agcccgcgct ggtggatgaa ggtctgtccg agttcgaggc acttgatccc
     1321 gaggcggtag ttgtcgttgg cgcggttctg ctcgatgtag ctgcgcgact ggagcgtggc
     1381 caggatgcgg aatacgttgt ttttatggag tttcagcttc ttgctgagtt ccgtcacccc
     1441 cagctcctcc gtttcgtccc ggaactcctc caggacatcg agggcgtggg cgaccgactg
     1501 gatgatgtag ttcgacttgt ctcgacggac catgtgaagc ccccctggag ggtggagtca
     1561 tttcataaca aaacaacgtt agatatattg gatcgggatt cgcatgtcaa cagaaagata
     1621 gaaccggatt atattcttcg aatctacttg tgcgcctgct tacttgaaca cctgcttgcc
     1681 ggatccatgc gccgatcgca tcctcgcgat ttcggccttc aggctgtccc ggtacgggta
     1741 gtccggtata ttttcgagaa gcgcttccca cgccttgatt ccaccctcgg tatcgtgcat
     1801 gtcctggatg agaatcactc cgagattgta gcgggactgt gcgtggcggg gactggtgga
     1861 gatggccctc ttgagttcct cgaccgcccg ggcagggttc ccgctgcgtc ggtagcagac
     1921 cgccatgtcg gtccgcacgt tcgcgttcgt ggggtccaac gcgagcgcct tccggtagtt
     1981 ctcgatcgcc aggagatccc gattcgtgtc gaagtagaga tttccgatcc cgatcagcgc
     2041 ctgcaggttg ttcgggtctt tccgaaggat ctccttgtaa ttctcgatat ccgcggcggc
     2101 gttcagccgg atcggctccc cctcccccgc cggggcgggc ggctgcttct tcttgcaccc
     2161 ggaaaccgaa aggagcaccg caagagacaa caggagcgcg agtcgga
//
LOCUS       DATGYW010000706         2251 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_159859, whole genome shotgun sequence.
ACCESSION   DATGYW010000706 DATGYW010000000
VERSION     DATGYW010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2251)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2251)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2251
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159859"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(165..1646)
                     /gene="cysS"
                     /locus_tag="VK429_09930"
     CDS             complement(165..1646)
                     /gene="cysS"
                     /locus_tag="VK429_09930"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HLN92156.1"
                     /translation="MHPCAGMGLFLYDSASRGNIPFVPADPERVRIYTCGPTVYRYAH
                     IGNLRTYLLTDLLVRTLRFLGYGTFAVQNITDMGHMHQERLEGGEDKVIAAARAAGKS
                     GREIARFFTEAFFRDCARMAFLPADAYPRASEHIPEMIALVRALEERGAIYGEGGYLY
                     FDVTKAPGYGIFSVARLGEGEAAERTDEAIHRHKKRPEDFTLWMPAEPGREFQWESRW
                     GRGWPGWHVECASMALKYLGPSFDVHVGGIDLRFPHHENSRAVAETATGKRLAAHWVH
                     AAHLLVDGKKMSKSAGNEYTLDDLEAGPPGGGKGFSAAEFRYYCLNLHYATPMNFTWE
                     GQEAAARGRSRLRAAFRRAALQATSGEDAAAALRAEYREAISDDLNMPRALAVVHKAV
                     RSGIGGDVARALAAEWDAVLGVGLFPETDGDDGADGVREGETGEIPVEVASMARERET
                     RRRECDYPAADALRERIRAAGYDVVDGPEGIPFLRKMEETRRR"
     gene            complement(1651..1848)
                     /locus_tag="VK429_09935"
     CDS             complement(1651..1848)
                     /locus_tag="VK429_09935"
                     /inference="COORDINATES: protein motif:HMM:NF014912.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HLN92157.1"
                     /translation="MPVNPMDVIRMALDREKVAYRNYTEYARIATQPEIRELFHYLAG
                     EEKKHVKLLTEEIEKETLQEM"
     gene            complement(1874..>2251)
                     /gene="nifU"
                     /locus_tag="VK429_09940"
     CDS             complement(1874..>2251)
                     /gene="nifU"
                     /locus_tag="VK429_09940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003516238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold protein NifU"
                     /protein_id="HLN92158.1"
                     /translation="AGPYSEKVMDHFMNPRNVGEIESADGVGEVGNPACGDMMRLYLK
                     IDGGKVVDAKFRTFGCGAAIASSSMLTEMIKGKTVDEARAITNQHVADALDGLPAVKI
                     HCSVMAEQAVKSALDDYSKKHVG"
BASE COUNT          326 a          831 c          692 g          402 t
ORIGIN      
        1 ggggtcggct ccgacccggc gcgccagccc ggacgcgtcg cattccccgg ccgcaagccc
       61 ccggaacacc ccgagtttca acgcggcgaa caggaccatc gcgcgctggt aaccgtgccc
      121 taccgccatc aggtcgtcca cgttgcgaac cggccccatc cgtgtcacct cctgcgggtc
      181 tcctccatct tccgtagaaa cgggatcccc tccggcccgt ccacgacatc gtaccccgcg
      241 gcccggatcc tttcccggag cgcatccgcc gccgggtaat cacactcccg ccttcgggtc
      301 tcccgttccc gcgccatcga cgcaacttcg accgggatct cccccgtctc tccttcgcgg
      361 acgccgtcgg ccccgtcatc gccgtccgtc tcggggaaca ggcccacgcc gaggaccgcg
      421 tcccactccg cggcgagcgc ccgggccacg tcccctccga tccccgatcg gaccgccttg
      481 tggacgacgg cgagagcccg cggcatgttc aggtcgtccg agatcgcctc gcgatattcc
      541 gctctcaacg ccgcggcggc gtcttccccc gacgtcgcct ggagagccgc ccgccggaag
      601 gcggcccgca ggcgggagcg cccccgggcg gccgcctcct gcccctccca ggtgaagttc
      661 atcggcgtcg cgtagtgaag gttcaggcag taataccgga attcggcggc ggagaatccc
      721 ttccccccgc ccggcgggcc ggcttcgagg tcgtccaggg tgtactcgtt ccccgccgac
      781 ttggacatct tcttcccgtc gaccaggagg tgcgccgcgt gcacccaatg ggcggcgagc
      841 ctcttcccgg tggcggtctc cgcaaccgcc cttgagttct cgtggtgggg aaaccgcagg
      901 tcgatccccc cgacatggac gtcgaatgag ggacccaggt atttgagcgc catcgacgcg
      961 cactcgacgt gccaccccgg ccacccccgg ccccatcggc tctcccattg gaactccctg
     1021 ccgggctcgg cgggcatcca gagggtgaaa tcctccgggc gcttcttatg ccggtggatc
     1081 gcctcgtccg tgcgctccgc ggcctctccc tccccaagac gggccacgga gaagatcccg
     1141 tatccgggcg ctttcgtcac gtcgaagtag aggtatccgc cctccccgta gatggcgccc
     1201 cgctcctcga gcgcgcgcac gagcgcgatc atctccggaa tgtgctccga cgccctcggg
     1261 tacgcgtccg ccggcaggaa cgccatgcgg gcgcagtcgc ggaagaacgc ctccgtgaag
     1321 aaccgcgcga tctcacggcc cgacttcccg gccgcgcggg cggcggcgat caccttgtcc
     1381 tcgcccccct ccaatcgctc ctggtgcatg tgccccatgt ccgtgatgtt ctggaccgcg
     1441 aaggtgccgt acccgaggaa gcgaagggtg cggacgagaa ggtcggtgag aaggtacgtg
     1501 cggaggttcc cgatgtgggc gtaccggtag acggtggggc cgcaggtgta gatgcggacc
     1561 cgctccgggt cggcgggcac gaaggggatg ttcccccggg atgcgctgtc gtaaaggaag
     1621 aggcccatcc cggcgcacgg gtgcaccgga ctacatctcc tggagcgttt ccttctcgat
     1681 ctcctcggtg aggagcttca cgtgcttctt ctcctccccg gcgagatagt ggaacagctc
     1741 ccggatctcg ggctgcgtgg cgattcgtgc gtactccgtg tagttccggt acgcgacctt
     1801 ctcgcggtcc agggccatcc gtatcacgtc catcgggttg acgggcatct cgatctcctc
     1861 caggggaatt atctcagccg acgtgcttct tcgagtaatc gtcgagagcg gatttcacgg
     1921 cctgctccgc catgaccgag cagtggatct tgaccgcggg cagcccgtcg agggcgtccg
     1981 cgacgtgctg attcgtgatc gcccgcgcct catcgacggt ttttcccttg atcatctccg
     2041 tcagcatcga actggaggcg atcgccgcgc cgcacccgaa ggtccggaac ttcgcgtcga
     2101 cgacctttcc cccgtcgatc ttgaggtaga ggcgcatcat gtccccgcac gccgggttgc
     2161 cgacctcgcc gacgccgtcg gcgctctcga tctctcccac gttccgggga ttcatgaaat
     2221 ggtccatcac cttttcgctg tagggtcccg c
//
LOCUS       DATGYW010000707         1666 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_160345, whole genome shotgun sequence.
ACCESSION   DATGYW010000707 DATGYW010000000
VERSION     DATGYW010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1666)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1666)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1666
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160345"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="VK429_09945"
     CDS             <1..364
                     /locus_tag="VK429_09945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92159.1"
                     /translation="KVVTASAKAVSLELVRDERAYREGFDRSVQEKRAVAEANVLVQE
                     AARLADQGKKEEAKGMLGKAAAGLAAAPPSPAVRAEMDHANRYKDTLDTMGDMSSEAA
                     KGAQKATKFRAYEMLQQR"
     gene            586..918
                     /locus_tag="VK429_09950"
     CDS             586..918
                     /locus_tag="VK429_09950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012530616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HLN92160.1"
                     /translation="MKTLAKVGVLVVSMCLVLPAAGLNAAEKKDSNGAKLFQQKCASC
                     HPDGGNIIKPSMTLHKKDLDAHGVKTAEDIIGKMRNPGPGMTRFDTKTISDKDAKEIA
                     QYILQTYK"
     gene            991..>1666
                     /locus_tag="VK429_09955"
     CDS             991..>1666
                     /locus_tag="VK429_09955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017742184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan 1,4-alpha-glucosidase"
                     /protein_id="HLN92161.1"
                     /translation="MGTDTDRNEAFGGPGIPPRWTHAAKDGVGTAYASSSRLWFTVWN
                     GVVTEVYYPTVDRPQLRDLQFLVTDGESFFHEEKRHLHSATERFSHHGLGYRITNSDP
                     EGRYSLVKEVLSDPHLPCLLVNATLSGEASFLKRLRLYALCAPHLGMGGSGNNGYVLE
                     IAGRRILTAEKDGVWLALAATVPFSRLSCGYVGQSDGWTDLAVGYRMDWEFGRATDGN
                     IALTGEL"
BASE COUNT          343 a          504 c          557 g          262 t
ORIGIN      
        1 gaaggtcgtc accgcctccg cgaaggcggt ttccctcgaa ctcgtccggg acgagcgggc
       61 ctatcgcgag gggttcgacc ggtcggtaca ggagaagagg gccgtcgcgg aggcgaacgt
      121 tctggtgcag gaagcggcac ggctggccga ccaggggaag aaggaggagg cgaaggggat
      181 gctcggcaag gcggcggcag ggctggcagc cgcccccccg tcacccgcgg tccgcgcgga
      241 gatggatcat gccaaccggt acaaggacac cctcgacacg atgggcgaca tgagctcgga
      301 ggcggccaag ggggcccaga aggcgaccaa gttccgcgcg tacgagatgc tccagcaacg
      361 gtaggagacg ggcggaaacc gggaggggaa acccgtcccc tcccggtgac gcccttcatc
      421 ctcctgtatt cgactccatt ttcgcgggtc ggcaggtgaa tcccaagccg gccggttccg
      481 ctattaatag gcgtcggtaa ccgacgttcc gggatgataa aatgacaacg gaacggaaag
      541 ccggtagaaa aaacgcgtcc ctgcgatgcg aaaaaggagg ggtagatgaa aacgttggcg
      601 aaggtaggag ttctcgtggt gtccatgtgc ctggtccttc ccgccgccgg cctcaatgcg
      661 gcggagaaga aggattcgaa tggggcgaag ctgtttcagc agaagtgcgc ctcctgccac
      721 ccggacgggg gaaacatcat caagccgtcc atgacgctcc acaagaagga cctggatgcc
      781 cacggtgtca agacggccga agacatcatc gggaagatgc ggaacccggg acccgggatg
      841 acccgtttcg acacgaaaac gatttccgac aaggatgcga aggagatcgc acagtacatc
      901 ctccagacct ataaataatc ggggagcctg ggacaggcgc atgtcccgat agccggtttc
      961 ctcctcttcc ggtcaccgaa aggagtcgcg atggggacgg ataccgatcg gaacgaggcg
     1021 ttcggagggc cggggatccc gccccgttgg acccatgccg caaaggacgg cgtcggcacg
     1081 gcctacgcca gctccagccg gctctggttc accgtctgga acggggtcgt caccgaggtc
     1141 tactacccga ccgtcgatcg gccgcagctc cgggatctcc agtttctcgt cacggacggg
     1201 gagagcttct tccacgagga gaagcgccat ctccattccg cgacggaacg gttctcccat
     1261 catgggcttg ggtacaggat cacgaactcg gacccggagg ggcgctattc gctcgtcaag
     1321 gaggtcctct ccgaccccca cctgccgtgc cttctcgtga acgcgaccct ctccggggaa
     1381 gcgtcgttcc tgaaacggct ccgactctat gccctgtgcg ccccccacct cgggatgggg
     1441 gggagtggga acaacggcta cgtgctggaa atcgcgggca gaagaattct caccgccgag
     1501 aaagacgggg tctggctcgc gctggccgca accgttccct tctcgcgcct gtcctgcggc
     1561 tacgtcgggc agagcgacgg ctggacggac cttgccgtcg gctaccggat ggactgggag
     1621 ttcggccggg ccacggatgg aaacatagct cttaccggcg agctgg
//
LOCUS       DATGYW010000708         2024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_532614, whole genome shotgun sequence.
ACCESSION   DATGYW010000708 DATGYW010000000
VERSION     DATGYW010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_532614"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VK429_09960"
     CDS             <1..429
                     /locus_tag="VK429_09960"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HLN92162.1"
                     /translation="DLSRLDGRHPCGVVMLDIDHFKGINDAHGHPFGDEVLRGVASVL
                     GKGVRKGDTAGRYGGEEFVLYLHMANTEQAREGAERFRRKIRQIRFAHAGKEITVTAS
                     FGVACAPYHGTRVEELLKHADESLYLSKQRGRDRVTVYPG"
     gene            513..>2024
                     /gene="argS"
                     /locus_tag="VK429_09965"
     CDS             513..>2024
                     /gene="argS"
                     /locus_tag="VK429_09965"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HLN92163.1"
                     /translation="MDARRIVESLVFSAVRKKIAEWGEDAEVSVSLEIPRQESHGDFS
                     TNAAMQLAGRLRRKPRAVAEEIVSALREEDRRGRFASLSIAGAGFINIVLSEEFWREV
                     LTVALEKGPRFGSSKAGEGKTVHIEFVSANPTGPLHVGHGRGAAIGDAIARILEFTGH
                     KVVREYYINDVGNQMDNLGRSLLARYRILCGRRAELPEDGYRGEYMIELARDVREEVA
                     DRYADTPEEEALPVFRKEAGDRILRGIRDDLASFRVTYDRWFAEQDLHERGLVAAALA
                     DLRERGHLYEAEGATYFRSQALGDEKDRVLVRADGRTTYFAADVAYHRHKLREGFSRM
                     IDIWGADHHGYVARLRAALRGLGENENRLEVLLVQFVTLIREGKAVQMSTRSGEFTTL
                     REVLDEVGVDAARFFYLLRSFHTHLDFDLTLAKTQSRNNPVYYVQYVHARICSIFREA
                     EAQGKTVAGHPPLSILTFPEEVRLMKAVARFPDVVSECSKTLEPHRIPFYLIEV"
BASE COUNT          374 a          625 c          665 g          360 t
ORIGIN      
        1 gatctctcgc gcctcgacgg tcgccatccg tgcggcgtcg tgatgcttga tatcgaccac
       61 ttcaagggga tcaacgacgc ccacggacac ccgttcggcg acgaggtgtt gcgaggggtg
      121 gcgtcggtcc tcggcaaggg agtccgcaag ggggacacgg cggggcggta cggaggggag
      181 gaattcgttc tctatctcca catggcgaac acggaacagg cccgggaagg cgccgagagg
      241 tttcgccgga agatccggca gatccgcttc gcccacgccg ggaaggagat caccgtcacc
      301 gcttccttcg gtgttgcgtg cgccccctat catggcaccc gggtcgagga gctcctgaaa
      361 catgccgacg agtcgcttta tctatccaag cagcgcggcc gcgaccgggt gacagtctat
      421 ccgggatgat gtatcggcac ggcgcgttga cacccccccg tcgggggggc taaactgcag
      481 cctttacaat cattttccct tcgaggcgct gtttggacgc acgtcgtatc gtcgaatccc
      541 tggtcttctc cgcggtgcgg aaaaagatcg cggaatgggg agaggacgcg gaagtttccg
      601 tctccctcga aatcccccgg caggaatcgc atggggattt ctccaccaac gcggcgatgc
      661 agcttgccgg gcgtctccgg agaaaaccgc gggcggtggc ggaggaaatc gtgtcggcgc
      721 tccgcgagga agaccggcga gggcgcttcg cgtccctatc gatcgcgggg gcggggttca
      781 tcaacatcgt tctctccgag gagttctgga gggaagtcct tacggtcgcc ctggaaaaag
      841 ggccgcgatt cggctcctcg aaggccggag agggaaaaac cgtccatatc gaattcgttt
      901 cggcgaatcc gaccggacct ctacacgtcg gtcacggccg gggcgccgcc atcggggacg
      961 ccatcgcccg gatcctcgag ttcaccggcc acaaggtcgt ccgcgaatat tacatcaacg
     1021 acgtcggaaa ccagatggac aacctcgggc gctcgctcct cgcaaggtac cgtatcttgt
     1081 gcggacgtcg ggccgagctt cccgaggatg ggtatcgcgg ggagtacatg atcgaactcg
     1141 cgcgggacgt tcgcgaggag gtggcggacc ggtacgccga caccccggag gaggaagcgc
     1201 ttcccgtctt caggaaggag gcgggagatc gcatccttcg cgggatccgc gacgaccttg
     1261 cgtcgttccg ggtgacgtac gaccggtggt tcgcggaaca ggatctgcat gaacggggac
     1321 tggtcgccgc cgcccttgcc gatctccggg aacgcggaca cctctacgaa gccgaagggg
     1381 cgacctattt ccgcagtcag gcgctggggg acgaaaaaga ccgcgtcctc gttcgcgcgg
     1441 acgggcgtac cacctatttc gcggccgacg tcgcgtatca ccgccacaaa ctgcgggaag
     1501 ggttctcccg gatgatcgac atctggggag ccgaccatca cgggtacgtg gcgaggctgc
     1561 gcgcggcgct ccgggggctc ggggagaacg agaaccgcct ggaggtgctt ctcgtgcagt
     1621 tcgtgaccct gatccgggag gggaaggcgg tccagatgtc tacccggtcg ggggaattca
     1681 cgacgctgcg cgaggtcctc gacgaggtgg gagtcgacgc cgcgagattt ttctacctgc
     1741 tgcgcagttt ccacacccac ctggacttcg acctcactct ggcgaagacc caatcgcgga
     1801 acaacccggt gtattacgtc cagtacgtgc acgcccggat ctgctccatt ttccgcgagg
     1861 cggaagccca gggaaaaacc gtcgccggac acccgcccct ttccatcctc accttccccg
     1921 aagaggtgcg gttgatgaag gcggtcgccc ggtttcccga cgtcgtctcg gagtgctcga
     1981 agacgctcga gccacaccgc attccctttt atctcattga agtt
//
LOCUS       DATGYW010000709         2004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_369751, whole genome shotgun sequence.
ACCESSION   DATGYW010000709 DATGYW010000000
VERSION     DATGYW010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369751"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VK429_09970"
     CDS             complement(<1..262)
                     /locus_tag="VK429_09970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015721839.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HLN92164.1"
                     /translation="MLIARRVREQSVYSEIHPYNVGMEFIRDFAPAGIILSGGPSSVY
                     DADAPRISREVLELGVPVLGICYGMQLIADLLGGKVGRSEDRE"
     gene            complement(312..1793)
                     /gene="guaB"
                     /locus_tag="VK429_09975"
     CDS             complement(312..1793)
                     /gene="guaB"
                     /locus_tag="VK429_09975"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011698974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HLN92165.1"
                     /translation="MKKETGISSAGGMVEGLTFDDVLLIPEESSVIPKDVDVTVNLTP
                     DIRLNIPLVSAAMDTVTESDTAIAMAREGGIGIIHRNNTPDEQATEVDRVKKSESGMI
                     SDPITVDPDQRVIEALEVMKKYRISGLPVTRDGKLVGILTNRDLRFETNFEQPIRAVM
                     TKDDLVTVPVGTTLEQAREILHRNRIEKLLVVDGRNNLKGLITIKDILKIAKYPNACK
                     DPLGRLRAGAAVSVSGWEERVQKLLKVGVDIICVDTAHGHSRDVLRVVKAIRTTFRGV
                     RIIAGNVATGEGTEALIKAGVDAVKVGVGPGSICTTRVVAGVGVPQFSAIMRCAQAAK
                     RKGVTIMADGGIKYSGDITKAMAAGASSVMIGSLFAGTEESPGEMILYQGRSYKVYRG
                     MGSLEAMKKGSKDRYFQSHIETESKLVPEGIEGRVPNRGPLAAVVFQLVGGLKAGMGY
                     VGARDIAELQKRASFLKITPAGLRESHVHDVIITKEAPNYRVE"
     gene            complement(1790..>2004)
                     /locus_tag="VK429_09980"
     CDS             complement(1790..>2004)
                     /locus_tag="VK429_09980"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92166.1"
                     /translation="RWANRLGRMTDAQRLRVPGMEKGRERYVVPGALLIVAAMERFRV
                     NGVTVSDAGLLEGILAGIGRNGGEDG"
BASE COUNT          315 a          729 c          575 g          385 t
ORIGIN      
        1 attccctgtc ctcggaccgg ccgaccttgc ctccgagcag gtccgcgatc agctgcatcc
       61 cgtagcagat tcccagcacg ggtacgccca gctcgagaac ctccctggag atccgcgggg
      121 cgtccgcgtc gtaaacgctg gacggcccgc cggagaggat gatcccggcc ggcgcgaagt
      181 cccggatgaa ctccatcccc acgttgtagg ggtggatctc gctgtagacg gactgctccc
      241 gcacgcgccg cgcgatgagc atcgtgtatt gcgaaccgaa atcgaggata aggatttttc
      301 cgtccaaacc gctactccac ccgatagttc ggggcttcct tcgtgatgat cacgtcgtgg
      361 acgtggctct cgcgcaggcc ggcaggcgtg atcttcagga aacttgcccg cttctgcaat
      421 tccgcgatgt cccgcgcccc cacgtacccc atccccgcct tcaacccgcc gacgagctgg
      481 aatacgacgg ctgccagggg gccccggttc ggaacgcggc cctcgatccc ctcggggacg
      541 agcttgctct ccgtctcgat gtgggactgg aaataccggt ccttgctccc cttcttcatc
      601 gcctccagcg atcccatccc ccggtacacc ttgtaggagc ggccctggta caggatcatc
      661 tctcccgggc tctcctcggt ccccgcgaag agggagccga tcatcacgga agaggcgccc
      721 gccgccatcg ccttcgtgat gtccccggaa tatttgatcc cgccgtccgc catgatggtg
      781 acccctttcc tcttcgccgc ctgcgcgcaa cgcatgatcg ccgagaactg cggaaccccg
      841 acacccgcga cgacgcgggt cgtgcagatc gaccccggac cgacgcccac cttgacggcg
      901 tcgaccccgg ccttgatcag cgcctcggtc ccctcgcccg tggcgacgtt cccggcgatg
      961 atccgtactc cgcggaaggt ggtccggatc gccttgacga cccgcagaac atcccgcgaa
     1021 tgcccgtgcg ccgtgtcaac gcaaatgatg tccacgccca ccttgaggag tttctggacc
     1081 cgttcctccc aaccggacac gctgaccgcc gcgccggcgc gcagcctccc gagggggtcc
     1141 ttgcaggcgt tgggatactt cgcgatcttc aggatgtcct tgatcgtgat gagccccttg
     1201 aggttgttcc gcccgtccac cacgaggagc ttctcgatcc ggttccggtg gaggatctcg
     1261 cgcgcctgtt cgagcgtcgt ccccacgggc acggtgacca ggtcgtcctt cgtcatgacg
     1321 gcgcggatcg gctgctcgaa attcgtctcg aaccgcaggt cgcggttggt gaggatcccg
     1381 acgagcttcc cgtcccgggt gaccggaagc cccgagatcc ggtacttctt catcacctcg
     1441 agggcctcga tgacgcgctg gtcgggatcg accgtgatcg ggtcggagat catcccgctc
     1501 tcggatttct tcacccggtc cacctcggtc gcctgctcgt ccggggtgtt gttccggtgg
     1561 atgatcccga tccccccctc gcgggccatg gcgatggcgg tgtccgattc cgtaaccgta
     1621 tccatcgcgg cagagacgag cgggatgttc agacggatgt cgggcgtgag gttgacggtc
     1681 acgtcgacat ccttcgggat cacggaggac tcctccggga tcagcagcac atcgtcgaac
     1741 gtcaaccctt ccaccattcc ccccgccgaa gaaatccccg tttccttttt catccgtcct
     1801 ctcccccgtt tcgtccgatt cccgcgagga tcccctcgag gagcccggcg tcgctcaccg
     1861 tcacaccgtt cacacggaaa cgctccatcg ccgcaacgat cagcagcgcc ccggggacga
     1921 cgtatcgttc ccggcctttc tccatcccag gcacgcgcag ccgctgcgca tccgtcatcc
     1981 gcccgagccg gttcgcccat cgtc
//
LOCUS       DATGYW010000710         1958 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_369766, whole genome shotgun sequence.
ACCESSION   DATGYW010000710 DATGYW010000000
VERSION     DATGYW010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369766"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1383)
                     /locus_tag="VK429_09985"
     CDS             complement(<1..1383)
                     /locus_tag="VK429_09985"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HLN92167.1"
                     /translation="MPYGFHLHLHVNGKRGVDLLHDPQINKGTAFTEKERDALGLRGL
                     LPPRVSTLEQQVLRVLENIHRKPSDIEKFIYLVSLQDRQETLFYRVVTDNIEEMMPII
                     YTPTVGQGCMEFGHIFRRPRGLYLSFRSQGRFREILTNWPYRDVRIIVVTDGERILGL
                     GDLGANGMGIPVGKLSLYTACAGIHPTQCLPVMLDCGTDNKTLLNDPLYIGIPERRLR
                     DQAYDDLVEEFFTAVQEIFPRACIQLEDFGNANAFRLLHKYKDRACTFDDDIQGTASV
                     ALAGLYSAVQTVGNRLSDHRFLFLGAGEAGIGIGELIVTALKTEGMTEEEARRRCWYV
                     DSKGLVVKSRTDLVPHKLPFAHDHASIGDFAAAMDSIKPTAIIGVSGMPRTFTRAVVE
                     AMARMNRQPIVFALSNPTSKSECTAEEAYTWSEGRAIFASGSPFAPVTYKGKTIVPGQ
                     GNNAYIFPGVG"
     gene            complement(1617..>1958)
                     /locus_tag="VK429_09990"
     CDS             complement(1617..>1958)
                     /locus_tag="VK429_09990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015720293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HLN92168.1"
                     /translation="VYVQQPPEMVLIPSSSVYFAPGVGVDLFFYSDRWWNRRGDRWYR
                     ASGYNGPWTAVGRRHVPAPVYRVPANYRTVYVHERPVPYGQWKKMHGEHGGKHAGKHA
                     GKHKGNKHHGD"
BASE COUNT          342 a          629 c          611 g          376 t
ORIGIN      
        1 gccgacgccc gggaagatgt aggcgttgtt tccctgcccc ggcacgatgg ttttcccctt
       61 gtacgtcacc ggcgcgaacg ggctgccgct cgcgaagatc gcgcgcccct ccgaccacgt
      121 gtaggcctct tccgccgtgc actccgattt cgacgtgggg ttcgacaggg cgaagacgat
      181 cggctgacgg ttcatgcgcg ccatcgcctc gacgaccgcc ctggtgaacg tgcgcggcat
      241 gccggacacg ccgatgatgg ctgtcggctt gatcgaatcc attgccgccg cgaaatcgcc
      301 gatggacgcg tggtcatgcg cgaacggcag tttgtgggga acaaggtccg tgcggctctt
      361 gacgacgagt cccttcgaat ccacgtacca gcacctgcgc ctcgcctctt cttccgtcat
      421 cccctccgtc ttgagggcgg tcacgatcaa ctcaccgatg ccgatgcccg cctcccccgc
      481 gccgaggaac aggaacctgt ggtcggacag gcggttgccc acggtctgca ccgcggagta
      541 gagcccggcc agcgcgacgg acgcggtgcc ctggatatcg tcgtcgaacg tgcaggcgcg
      601 gtccttgtac ttatgcagca accggaaggc gttcgcgttc ccgaaatcct cgagctggat
      661 gcaggctctc gggaagatct cctgcacggc ggtgaagaac tcctccacga ggtcgtcata
      721 cgcctggtcg cgcagtcgcc gctccggaat gccgatgtag agcggatcgt tcagcagcgt
      781 cttgttgtcc gtgccgcaat ccagcatgac gggcagacat tgcgtgggat ggatgccggc
      841 gcaggcggtg tacagggaga gcttgcccac ggggatgccc attccgttcg cgccgaggtc
      901 gcccaggcca aggatccgct ccccgtccgt gacgacgatg atgcggacat cgcggtacgg
      961 ccagttcgtc aggatctccc ggaagcggcc ctggctcctg aaggaaagat acagtccccg
     1021 cgggcggcgg aaaatatgcc cgaactccat gcacccctgg cctaccgtcg gggtgtagat
     1081 gatgggcatc atttcctcga tgttgtccgt gaccacccgg tagaagaggg tctcctggcg
     1141 gtcctggagc gagaccaggt agatgaactt ctcgatgtcg ctcggcttgc ggtggatgtt
     1201 ttccagcacg cgcaacacct gctgctccag cgtggacacc cgcggtggga gcagcccgcg
     1261 caggcccagg gcgtcacgct ccttctccgt gaaagcggtt cccttgttga tttgcggatc
     1321 atgcaacagg tcgacccccc gtttcccgtt cacgtgcaga tgaaggtgga aaccgtacgg
     1381 catgggaggc ctcctgatgc agatggaatt cccggggagc ataacacaac gtcgatatag
     1441 ccgaagaaag gaaccactct tcggtccggc tttcggtgaa attcccctcg tacagttggc
     1501 ctaagaacgg gggcaggtcg cctccgttca catgacgata aaaaaaaagc ccgggatcgc
     1561 tcccgggccg gctacgcttt cccgactctt cccgtgcgct ggcagcgggc tctcccctaa
     1621 tcgccgtggt gcttgttccc tttgtgtttc ccggcgtgtt tcccggcgtg tttcccgccg
     1681 tgttccccgt gcatcttctt ccactggccg tacgggacgg gacgctcgtg gacgtacacc
     1741 gtgcgatagt tcgcgggaac ccggtacacg ggcgcaggga cgtgacggcg gcccacggct
     1801 gtccacggac cgttatagcc gctggcccgg taccaccggt ctccgcgccg gttccaccaa
     1861 cggtcgctgt agaagaaaag gtccacgccg acacccggtg cgaaatagac gctcgaactg
     1921 gggatcagga ccatttccgg aggttgctgg acatacac
//
LOCUS       DATGYW010000711         2851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_212746, whole genome shotgun sequence.
ACCESSION   DATGYW010000711 DATGYW010000000
VERSION     DATGYW010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212746"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1097)
                     /gene="nusA"
                     /locus_tag="VK429_09995"
     CDS             complement(<1..1097)
                     /gene="nusA"
                     /locus_tag="VK429_09995"
                     /inference="COORDINATES: protein motif:HMM:TIGR01953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HLN92169.1"
                     /translation="MILDVGQIIAQLGKEKGIDKAVIIAAIKEALETAARKKYGMNKI
                     LEATYDPDTGEFEILSFRTATETVVDPDTQMTLEEAQVLDPEAQVGDSLGERLSTKDL
                     GRIAAQTARQIIMQKVKDAEREVIYNEFIGRKGEILNGIVQRYERDCLVIDLGKTEAI
                     MPPSEQIPRERYRQGDRIRAYIKDVSKTSRGPEILLSRADPRVILKLFEQEVPEVYEG
                     VVSILSVAREPGFRTKIAVRSRDRDVDPVGACVGMKGSRVQSVVQELRGERIDIIAWD
                     EDPARFVCNALQPAEIIRVLVNESGKTMEVIVPEEQLLLAIGKRGQNVKLASKLVGWH
                     IEVRAEGQVEDALKRAEGLFTKKPEDMPAEAP"
     gene            complement(1094..1576)
                     /locus_tag="VK429_10000"
     CDS             complement(1094..1576)
                     /locus_tag="VK429_10000"
                     /inference="COORDINATES: protein motif:HMM:NF014617.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HLN92170.1"
                     /translation="MDTSKIEALAGEVARDLSLSLFDVEIAREGPRTFLRVFVEREGG
                     VPLSDIATFSRRFGAILEVDDPIDGPYVLEVSSPGVTRRLRRQEHFERSLGKRVRVNL
                     AAPREGRRHLVGELSGCDGEGIVVVADGTTYRVPYGEIRKANLDVTQEELFGKGKKKR
                     "
     gene            complement(1712..2644)
                     /locus_tag="VK429_10005"
     CDS             complement(1712..2644)
                     /locus_tag="VK429_10005"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007294155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HLN92171.1"
                     /translation="MTQPVTPDLSARVGSVLLKNPVMSASGTFGYGLEFTPFYDISRL
                     GAVIVKGLSLLPTPGNAPGRIVETPAGMLNAIGLQNIGVERFVSEVAPRLADAGAVFV
                     ANIYGRTIEEYEAVARRLSEVPALAAIELNASCPNVKEGGIAFGSNPEGLSGLTRRVR
                     AATGKPLWVKLSPNVSDIGAIARAAEEAGADAVTLINTIVGMAVDARTRRPILSNVTG
                     GLSGPAVKPVALRMVWEACRAVKIPVIGIGGIQSAGDALEFLLVGASAVQVGTANFRN
                     PNACVEIIDGIRDFFLREKISRLDDYRGKLLLRE"
     gene            complement(2641..>2851)
                     /locus_tag="VK429_10010"
     CDS             complement(2641..>2851)
                     /locus_tag="VK429_10010"
                     /inference="COORDINATES: protein motif:HMM:NF021903.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HLN92172.1"
                     /translation="ACGPHEMLKAVAELALPLDIRVQVSLESSMACGFGVCWGCVTAI
                     RDGEKSGYRRVCKEGPVFDAREVVW"
BASE COUNT          457 a         1035 c          849 g          510 t
ORIGIN      
        1 ggggcctccg cgggcatgtc ttccggcttc ttcgtgaaca acccctccgc cctcttcagg
       61 gcgtcctcga cctgtccctc ggcccgcacc tcgatgtgcc agccgaccag cttggaggcg
      121 agcttcacgt tctgtccccg cttcccgatg gcgagaagca gctgctcctc gggaacgatc
      181 acctccatgg tcttcccgga ctcgttcacc agcacacgaa tgatctcggc cggctgaagg
      241 gcgttgcaga cgaaccgggc ggggtcctcg tcccatgcga tgatgtcgat ccgctcgccg
      301 cgaagctcct gcacgacgct ctgcacgcgg gatcccttca tgccgacgca cgcgcccacg
      361 gggtcgacat cccggtccct ggagcgtaca gcgatcttgg tgcggaagcc gggctccctc
      421 gccacgctca ggatggagac gaccccctcg tagacctcgg ggacctcctg ctcgaagagc
      481 ttgaggatga ccctcgggtc ggcccgggag agaaggatct ccggcccccg ggaggtcttg
      541 ctgacgtcct tgatgtaggc ccggatccgg tcaccctggc ggtaccgctc gcggggaatc
      601 tgttccgacg ggggcatgat cgcctcggtc ttcccgaggt cgatgacgag gcagtcgcgc
      661 tcgtaccgct gcacgatgcc gttcaggatc tcccccttcc ggccgatgaa ttcgttgtag
      721 atgacctcgc gctccgcatc cttcactttc tgcatgatga tctggcgcgc cgtctgggcg
      781 gcgatccgcc ccagatcctt ggtgctcagc cgctcgccga ggctgtcgcc cacctgcgcc
      841 tcggggtcga ggacctgcgc ttcctcgagg gtcatctgcg tatcggggtc gacgaccgtc
      901 tccgtcgccg tgcggaacga caggatctcg aactccccgg tgtcggggtc gtaggtcgcc
      961 tcgaggatct tgttcatccc gtacttcttc cgcgcggcgg tctcgagggc ttccttgatc
     1021 gccgcgatga tgacggcctt gtcgatccct ttttccttgc ccagctgggc aatgatctgt
     1081 cccacgtcca gaatcatcgc tttttctttc ccttcccgaa gagttcttcc tgcgtcacat
     1141 ccaggttcgc cttccggatc tccccgtacg gcacccggta cgtcgtcccg tccgccacga
     1201 ccacgatccc ctcgccatcg cagccggaga gctctccgac gaggtgccgc cggccctccc
     1261 gcggcgccgc gaggttcacc cggacccgtt tcccaaggga ccgttcaaag tgctcctgcc
     1321 ggcgcagccg ccgggttacc ccgggggagg aaacctcgag cacgtagggg ccgtcgatgg
     1381 ggtcgtcgac ctcgaggatc gcgccgaaac ggcggctgaa cgtcgcgatg tcggaaaggg
     1441 ggaccccgcc ctcacgctcc acgaataccc ggaggaaggt cctcggccct tcccgcgcga
     1501 tttccacgtc gaacagggaa agggacagat cccgggcgac ttccccggcc agcgcctcga
     1561 tcttcgatgt gtccatattc gtagcgatca aggaaaaaaa aagtgggctc cagcccaccg
     1621 ttccaagccc taaaccccat catactacag ggaaaccgcc gatccccaca acacatttct
     1681 tttatcgcac aagttactca tggacaggcc cttactcccg caggaggagc ttcccacggt
     1741 agtcgtccag gcgggagatc ttctcccgga ggaaaaaatc ccggatcccg tcgatgatct
     1801 cgacgcacgc gttcgggttg cggaagttcg ccgtccccac ctgcaccgca gaggcgccca
     1861 ccagcaggaa ctcgagggcg tccccggcgc tctgtatccc cccgatcccg atcaccggga
     1921 tcttcaccgc cctgcacgcc tcccacacca ttcgaagcgc caccggcttc accgcgggcc
     1981 ccgaaaggcc tcccgtcaca ttggagagga tcggccggcg cgtccgggcg tccaccgcca
     2041 ttcctacgat ggtgttgatg agggtcaccg cgtccgcccc cgcctcctcg gccgcccgcg
     2101 cgatcgcgcc gatgtccgac acgttcgggg agagctttac ccacaacggc ttccccgtgg
     2161 cggcacgcac ccgccgggtg agaccggaca gcccctcggg gttcgaaccg aaggcgatcc
     2221 ccccctcctt cacgttggga caggaggcgt tcagctcgat cgccgccagc gcggggacct
     2281 cggagagcct tcgggccacc gcctcgtact cctcgatcgt gcgtccgtag atgttcgcga
     2341 cgaacacggc gccggcatcg gccagtcgcg gcgccacctc gcttacgaac cgctcgaccc
     2401 cgatgttctg caggccgatc gcgttcagca tccccgcggg ggtctccacg atccgcccgg
     2461 gggcgttgcc cggggtcggc aggagggaca gccccttgac gatcaccgcc cccaggcggg
     2521 agatgtcgta gaacggggtg aattccagac cgtatccgaa cgtgccggag gcgctcatca
     2581 ccgggttctt gaggagcacg ctccccaccc gggcggagag gtcgggggtc acgggctgcg
     2641 tcaccagacg acctccctcg cgtcgaagac cggtccttcc ttgcagaccc ttcggtatcc
     2701 ggacttctct ccgtcccgaa tcgccgtgac gcacccccag cagacgccga agccgcacgc
     2761 catcgaactt tcgagggaca cctgaacccg aatgtcgagg gggagggcga gttccgcgac
     2821 ggccttcagc atctcgtggg gcccgcacgc g
//
LOCUS       DATGYW010000712         3530 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_370059, whole genome shotgun sequence.
ACCESSION   DATGYW010000712 DATGYW010000000
VERSION     DATGYW010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3530
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370059"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="VK429_10015"
     CDS             complement(<1..523)
                     /locus_tag="VK429_10015"
                     /inference="COORDINATES: protein motif:HMM:NF012621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HLN92173.1"
                     /translation="MKSVPLQEAPACPCGDVCTMASRRVFRVEGMDCAHESGPILSAL
                     SGLSGVGRAVPSYSDSTLAVEFDPHAVSPERIVRAINEAGFRANVEDRQQEDIPFWVR
                     HGRLVATSLSGGSLVVGLILQLLLDRLSTAKPFLLMASVAGGWYVSRRAWQALRHRQL
                     EMNTLMTTAAVGAL"
     gene            complement(596..964)
                     /locus_tag="VK429_10020"
     CDS             complement(596..964)
                     /locus_tag="VK429_10020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013119348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HLN92174.1"
                     /translation="MKRKTSDVCEVYYVNEKHVEKARKALSPEREVLAVAEMFRNLGD
                     PTRVKILQALAVEELCVCDLAKLLGVSESATSHQLRVLRSQKLVRFRKEGKMAFYSLD
                     DEHVDSLMREVLRHVREGIA"
     gene            1612..3015
                     /locus_tag="VK429_10025"
     CDS             1612..3015
                     /locus_tag="VK429_10025"
                     /inference="COORDINATES: protein motif:HMM:NF016995.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HLN92175.1"
                     /translation="METISEVRIEEAAPVAPAKRTPSPIDQVWEFFISVKLAIFTLII
                     LAIASIFGTIVEQNQPPEKYHQIYEDWAFALMNRINLFDMYHSWWFLLLLVLFTVNLT
                     CCTIDRFPKMLRVVRNPKTKLDGNLEKTLSLSDRWKKKGTTSDWTAKYSSALTSAFTK
                     PKVTEEGGEVHLYAETGVASRFGVYVTHLSIVIIFIGAILGNVFGFKSYVNIPDGKEA
                     SHLDARGGKQHIDLPFSVRNNKFWLETYPSGQPKSYKSDLSVFEGGREVLRKTIVVND
                     PLQYKGIWFYQSSYGQAGGTTALVSVRRPDGSVVGALSLVPNEPTPIDGYGTVRGVNY
                     DQNFQGRGPALQVVVEKPGKPADNFWLPQQMPDQDRQRKDTMVFSFGGLDSKMYTGLQ
                     VAKDPGVNIVWLGCALMVIGITMAFFLSHQRVWVRLAQGQDGRVEVVLAGSASRNRLA
                     FEKKFAKILTDVKAVGQ"
     gene            3012..>3530
                     /gene="ccsA"
                     /locus_tag="VK429_10030"
     CDS             3012..>3530
                     /gene="ccsA"
                     /locus_tag="VK429_10030"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HLN92176.1"
                     /translation="MSNVILFNLTTVLFGVASALYLGALYAKNGKIAEFGTWTCLLAA
                     VVSTAALGVRWYESYQMGIGRIPVTNLYESLVFFAWSVNLFYLIVERKYANRTFGAFV
                     MPIAFFAMVFAVYNDSSIQPLVPALQSYWLHAHVITCFVGYAGFAVSAGAALMYMLKS
                     KQEAAKINEGIVG"
BASE COUNT          708 a         1130 c         1010 g          682 t
ORIGIN      
        1 ggagggcgcc gaccgcggcg gtggtcatca gcgtgttcat ctccaactgg cggtgcctca
       61 acgcctgcca cgcccggcgg gagacgtacc acccccccgc aaccgacgcc atcaggagga
      121 aaggcttcgc cgtggaaagc cggtcgagca gaagttgcag gatcagcccg acaaccagcg
      181 atccccccga gagagaagtt gcgacaagac gtccgtggcg cacccaaaac gggatgtctt
      241 cctgttggcg atcctcgacg tttgcgcgaa atcccgcctc gttgatcgct cgcacgatgc
      301 gctcgggcga tacagcatgc gggtcgaact ccacggcaag cgtggaatcg gaataggaag
      361 ggaccgcccg gccgactccg gaaaggcccg acagggcgga aaggatcggt ccggattcgt
      421 gggcgcaatc catcccctcg acccggaaga cccggcgcga tgccatggtg cagacgtccc
      481 cgcaggggca tgccggagct tcctgcaacg gtacgctttt catccgcacc tccttttcga
      541 ctctttcaac taaatacatg agcatacgtt catgtatgat cgcaaaaaaa aaccgctacg
      601 caatcccttc ccgaacatgg cgcaatacct cccgcatcag ggagtcgacg tgttcgtcgt
      661 caagggagta gaaggccatt tttccctctt tccggaagcg gacgagtttc tggctccgca
      721 atacccggag ctggtgcgac gtcgcggatt cgctgacccc aagaagcttc gccagatcgc
      781 aaacgcaaag ctcctcgacg gccagggcct ggaggatctt cacccgcgtg gggtctccca
      841 ggttgcggaa catctccgcc acggccagga cctccctttc gggagagagc gccttacggg
      901 ccttctccac atgtttctcg ttcacgtaat acacttcgca gacatccgaa gttttgcgct
      961 tcatcgcacc cctcgataca cctgcacata tgttcatgtt tgatgataca gaccaacgtc
     1021 gcaggagtca accgaaaaag cgcagcctcc gtcccccacc ccccagggaa agcggaataa
     1081 tgcgaattca atgcgatttc aattgccaac ccgggatggg gagatgtact atctcacaaa
     1141 tgttcgcccg aacttttttc cggggagtcc tcctcggggt gataatcctt cagatgctcg
     1201 cctccgcggc agaggcgacg gcatgtaagc cgtgccccga caaatcggcg gccctctgcc
     1261 cgtccttcag cgaaaccgca acgatgtccg gcgcctcctc cgaatgccag gccggttcct
     1321 ctctcccgac gagtcacgcc ggggcagacg accattgctc cctctgcccg ctctgtctcc
     1381 ccctcttcat taaggcggca cccatgtccg tttcccccga cgatcagggg caacgcttca
     1441 ctgccgcggt gcaactggcg ctctacgaag cgccgtcctt ctcacttctc aggcccccca
     1501 tagcgtaacc ccctttttcc cgtcccttga ccgtcggttc ctgcgggaac cggtgcgcat
     1561 gtcaccaacg ccgtagtcat attttgtgct tcatcgacag aaggaggccc tatggaaacc
     1621 atttcagaag ttcgtataga ggaggcggcc ccggtcgcac ccgcgaaacg cacaccatcg
     1681 ccgatcgacc aggtgtggga atttttcatt tccgtaaagc tggcaatctt tacgctgatc
     1741 atcctcgcca tcgcctcgat cttcgggacg atcgtcgaac agaaccaacc cccggagaag
     1801 taccaccaga tctacgaaga ctgggcgttc gccctgatga atcggatcaa cctgttcgac
     1861 atgtaccact cctggtggtt cctgctcctg ctggtcctct tcacggtgaa cctgacctgc
     1921 tgcacgatcg accgcttccc gaagatgctg cgggtagtga ggaacccgaa gacaaagctc
     1981 gacgggaacc ttgaaaagac cctttcgctc tcggaccggt ggaagaagaa ggggaccact
     2041 tcggactgga cggcgaagta ttcctcggcg ctgacctccg ccttcacgaa gccgaaggtc
     2101 accgaggaag gtggggaggt ccacctgtac gccgagaccg gtgttgcctc ccggttcggc
     2161 gtctatgtga cccatctctc gatcgtcatc atcttcatcg gggcgatcct cgggaacgtc
     2221 ttcgggttca aatcgtacgt gaatatcccg gatggaaagg aagcgtccca cctggacgca
     2281 cgagggggca agcagcatat cgatttgccc ttctccgtcc ggaacaacaa gttctggttg
     2341 gagacgtacc ccagcgggca gcccaagtcg tacaaatccg acctcagcgt cttcgaaggt
     2401 gggcgggaag tcctccggaa gacgatcgtg gtgaacgacc cgctgcagta caaggggatc
     2461 tggttctacc agtcgagcta cggacaggcg gggggaacaa cggcgctggt gtcggtccgc
     2521 cgtcccgacg gctcggtcgt gggtgccttg tccctcgtgc ccaacgagcc aactccgatc
     2581 gacgggtacg gaaccgtccg cggggtgaac tacgaccaga acttccaggg gagaggccct
     2641 gcgctccagg tggtcgttga aaagccgggg aaaccggcag acaatttctg gctcccccag
     2701 caaatgcccg accaggaccg ccaacggaag gacacgatgg tcttctcctt cggcggcctg
     2761 gactccaaga tgtacaccgg gctgcaggtg gcgaaggacc caggggtcaa catcgtgtgg
     2821 ctcggatgcg cactgatggt catcgggatc accatggcct tcttcctgtc ccaccagcgg
     2881 gtgtgggtgc gcctggccca ggggcaggac ggccgcgtgg aggtcgtcct cgccggctcc
     2941 gccagccgca accggcttgc cttcgaaaag aaattcgcga aaatactaac cgacgtgaag
     3001 gcggtgggcc aatgagcaac gtcatcctct tcaatctgac cacggtactg ttcggcgtgg
     3061 cgtccgccct gtatctcggc gccctctatg cgaagaacgg gaagatcgcg gaattcggga
     3121 catggacgtg cctcctcgcc gccgtggtct ccaccgccgc tctgggcgta cgctggtacg
     3181 agtcgtacca gatggggatc ggtcgcattc ccgtgacgaa cctctacgag tcgctcgtct
     3241 tcttcgcctg gtcggtgaat ctgttctacc tgatcgtgga gcggaagtac gccaatcgaa
     3301 ccttcggcgc cttcgtgatg ccgatcgcct tcttcgcgat ggtcttcgcc gtctataacg
     3361 acagcagcat ccagccgctg gtgccggccc tgcagtcgta ctggctgcac gcccacgtca
     3421 tcacctgctt cgtcgggtac gcgggcttcg ccgtgtccgc cggagcggcg ctcatgtaca
     3481 tgctcaagtc gaagcaggag gcggcgaaga tcaacgaggg gatcgtcggt
//
LOCUS       DATGYW010000713         2002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_370861, whole genome shotgun sequence.
ACCESSION   DATGYW010000713 DATGYW010000000
VERSION     DATGYW010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2002
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370861"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..251)
                     /locus_tag="VK429_10035"
     CDS             complement(<1..251)
                     /locus_tag="VK429_10035"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF014873.4"
                     /note="produces ATP from ADP in the presence of a proton
                     gradient across the membrane; the B subunit is part of the
                     catalytic core of the ATP synthase complex; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit B"
                     /protein_id="HLN92177.1"
                     /translation="MRRVTMGEMVEVLLPDGSSRRGQVIEFSDRFTLVQILEQSTGID
                     VLSTRIRFSGSPARMPLSLDILGRCFDGAGNPIDGLPPVL"
     gene            complement(317..>2002)
                     /locus_tag="VK429_10040"
     CDS             complement(317..>2002)
                     /locus_tag="VK429_10040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015284303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit A"
                     /protein_id="HLN92178.1"
                     /translation="AGARIHNRVLVGEDHLPGEVIRLEADRATIQVYEDTTGLGLGEG
                     VTDVGKPLLAELGPGLLGSVYDGVQRPLHAIRAMSGDFIGRGQSAPPLDREKRWEFRP
                     VAREGDVVGPGDVLGVVAETPRVDHLVMVPPGSGGTIGRILAGTFPVLSPVAFLADGT
                     ALPMVQRWPVRTPRPFRKRLPPTVPFITGQRVFDVLFPLSAGGAAIIPGGFGTGKTIV
                     EHSLARHAGADVIVFVGCGERGNEMTEVLADFPELEDPSTGRPLMERTVLVVNTSNMP
                     VAAREASVYTGITIAEYYRDMGYRVALLADSISRWAEALREISSRLEEMPGEEGYPTH
                     LASRLAGFYERGGQISCLGGGEREGTVTIVSAVSPPGGDFSEPVTQSSQRIAGVFWAL
                     DPALAHRRHFPAVDWKKSYSLYTGAIDDWFRENVSAECTALRGGLMALLQREEELQEV
                     VQMVGIDALQEQERIVLTVSKMVREHFLRQSAYSETDASCSPERAYLMLKAFLSFHTL
                     CRDLLARKIPVETVLALPFREELERMKELPAEGFRETVTALIARIETEGGRDR"
BASE COUNT          331 a          699 c          669 g          303 t
ORIGIN      
        1 agcacgggcg gaagcccgtc gatggggttc cccgcgccgt cgaagcagcg gcccaggata
       61 tccagggaga ggggcatccg ggccggggag ccggagaagc ggatgcgggt ggagaggacg
      121 tcgatcccgg tcgactgctc aaggatctgg accagcgtga aacggtccga gaattcgatc
      181 acctgccccc gccgggagga accgtccggg agaaggacct cgaccatctc ccccatggtg
      241 acccggcgca ccccctccac gaaaacgagg ggtcccgtga cggaatggat ggtccggtat
      301 tcgcgcgtga cgaggtctat cggtctctcc ccccttccgt ttcgatccgg gcgatcagcg
      361 cagtcaccgt ctcccggaac ccttcggcgg gcagctcctt catccgttcc agctcctcgc
      421 ggaaggggag ggccaggacg gtttcgacgg gaatcttgcg ggcgagaagg tcccggcaaa
      481 gggtgtggaa cgagaggaac gccttcagca taaggtacgc cctctccggg ctgcaggaag
      541 cgtccgtttc cgaataggcg ctctgccgaa ggaaatgctc ccgtaccatc ttgctgaccg
      601 tcaggacgat ccgctcctgt tcctggagcg cgtcgatccc caccatctgg acgacctcct
      661 ggagctcctc ctcccgctgg agaagcgcca tcaggccgcc gcggagcgcg gtgcattcgg
      721 ccgaaacgtt ttcccggaac cagtcgtcga tcgccccggt gtaaagggag tagctctttt
      781 tccagtccac cgcggggaaa tgacggcgat gcgccagggc gggatcgagg gcccagaaga
      841 cgccggcgat ccgctgggag ctctgcgtga cgggctccga gaagtccccc cccggagggg
      901 agacggccga gacgatcgtg accgtccctt cccgctcccc gccccccagg caggagatct
      961 ggccgccgcg ttcgtagaag ccggcaaggc ggctggcgag gtgggtcggg tatccctcct
     1021 cgccgggcat ctcctccagg cgcgaggaga tttcgcggag agcctccgcc caccgggaga
     1081 tggaatcggc gaggagggcc acccggtacc ccatatcccg gtaatattcc gcgatcgtga
     1141 tcccggtgta gacggaagcc tcgcgggcgg ccaccggcat gttcgaggtg ttcacgacga
     1201 ggacggtcct ctccatgagg ggcctccccg tggacgggtc ctcgagctcc ggaaaatccg
     1261 ccagcacctc cgtcatctcg ttcccgcgct ccccgcaccc cacgaagacg atgacgtcgg
     1321 cccccgcgtg cctggcgagg gagtgctcca cgatggtctt cccggtcccg aatccccccg
     1381 ggatgatcgc cgccccgccc gccgagaggg ggaacagcac gtcgaacacc cgttgccccg
     1441 tgatgaacgg caccgtgggg gggaggcgtt tccggaacgg ccgcggagtg cggacaggcc
     1501 atctctggac catcggaagc gcggtcccgt ccgcgaggaa cgcgacgggt gaaaggacag
     1561 ggaacgtccc cgccaggatt cgcccgatcg ttcccccgct tcccggcggg accatcacga
     1621 ggtggtcgac gcggggggtc tccgccacga cgcccaggac atcccccggt ccgaccacgt
     1681 ccccttcccg ggccacgggg cggaactccc accgtttctc tcggtcgagg ggcggcgccg
     1741 attgccccct tccgatgaag tcgccgctca tcgcccggat cgcgtgcagg gggcgctgaa
     1801 cgccgtcgta cacggagccc aggagcccgg gaccgagctc cgcgagaagc ggtttcccga
     1861 cgtcggtgac cccttcgccg agtccgagac cggtcgtatc ctcgtagacc tggatggtgg
     1921 cccggtccgc ctccagccgg atcacctcgc ccgggaggtg gtcctccccc accaggaccc
     1981 ggttgtggat ccgggccccc gc
//
LOCUS       DATGYW010000714         2348 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_105274, whole genome shotgun sequence.
ACCESSION   DATGYW010000714 DATGYW010000000
VERSION     DATGYW010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105274"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            298..1461
                     /locus_tag="VK429_10045"
     CDS             298..1461
                     /locus_tag="VK429_10045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013013161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HLN92179.1"
                     /translation="MNFVYLSPHFPPNYYRFCVRLREEGVNVLGLADAPYGSLRPELR
                     GALSEYYRVDDMSSYDALVRALGHFTHRHGKLDGIDSLSEHWLETEARLRTDFNMDGL
                     RQDRIGIIKRKSAMKEIYRAAGIRVARGAVVRTVKEARRLVAETGYPVVAKPDVGVGA
                     AATFKIRDDGELSAFFDRKPPVDYIVEEFIQGKIFSFDGLTDRDGNLVFFTSHAFSQG
                     IMETVNDDVDLFYHSLREIPADLEEAGRRTARAFDVRGRFFHFEFFRAERDGGIVALE
                     VNLRPPGGLTTDMFNYANDIDIYREWARVVAHNRFAASWSRPYHVGYVGRKRGKRYVH
                     NPGEILEAFGGLIVHHEEIDSIFRAAIGDHGYLIRSKDLDEVRAAARYIQETA"
     gene            1496..2215
                     /locus_tag="VK429_10050"
                     /pseudo
     CDS             1496..2215
                     /locus_tag="VK429_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013013160.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
BASE COUNT          392 a          781 c          779 g          396 t
ORIGIN      
        1 cctgccccat cttcttggag atggtcctgg acccgaccgg ctccgccgtg gcgatgtaat
       61 cctcgacgat gtgacgcagg acccgggtcg tgcgatcgtc catcccggaa gccatttcac
      121 cttccccgca aacgagttag cactccggca tggagagtgc taagacacaa tgtagcagcc
      181 gccggccgac ggtgtcaagc cggtccgccc ccgtcgaact ccagccggtc ctcggataat
      241 gataccagag agcgggcccg gcttgacggt tcctcccgcg cctgcgagga tgagccgatg
      301 aacttcgtct atctttcccc gcattttccg ccgaactatt accgcttctg cgtccggctt
      361 cgggaggaag gggtgaacgt cctcgggctg gccgacgctc cgtacgggtc gctgcggccg
      421 gaactccgag gggcgctctc cgaatattac cgcgtggacg acatgagctc gtacgacgcg
      481 ctggtccggg cgctcggcca cttcacccac cggcacggga agctcgacgg gatcgactcc
      541 ctcagcgagc actggctgga gaccgaggcg cgccttcgaa ccgatttcaa catggacggg
      601 cttcgccagg accggatagg gatcatcaag cggaagtccg ccatgaagga aatctaccgg
      661 gccgccggaa tccgggtcgc ccggggcgcc gtggtccgga ccgtcaagga ggcgagacgg
      721 ctggtcgccg aaaccggcta tccggtggtc gccaagcccg acgtgggagt gggggcggcg
      781 gcgaccttca agatccgcga cgacggcgag ctctccgcct tcttcgaccg gaagccgccg
      841 gtggactaca tcgtcgagga gttcatccag gggaagatct tctccttcga cggcctgacc
      901 gaccgcgacg gcaacctcgt cttcttcacc tcgcacgctt tcagccaggg gatcatggag
      961 acggtcaacg acgacgtcga cctcttctac cactccctcc gtgagatccc ggcggacctc
     1021 gaggaggcgg ggcggcgcac ggcgcgggcc ttcgacgtcc gcggacggtt cttccacttc
     1081 gagttcttcc gggccgagcg ggacggcggg atcgtcgcgc tcgaggtgaa cctgcggccg
     1141 ccgggcggat tgacgacgga catgttcaat tacgccaacg acatcgacat ctaccgggag
     1201 tgggcgcgcg tggtggccca caaccggttc gcggcgtcgt ggtcccgtcc gtaccacgtc
     1261 ggctacgtcg gccggaagcg cgggaagcgg tacgtccaca atcccgggga gatcctcgaa
     1321 gccttcgggg gcctcatcgt gcaccacgag gagatcgact cgatcttccg cgcggcgatc
     1381 ggcgaccacg ggtacctgat ccggtcgaag gaccttgacg aggtgcgggc cgccgcccgg
     1441 tacatccagg aaaccgcgtg acgctgcgag acgccgcgcc gggaagggac cgtcgatgaa
     1501 cgtcgcgtac caccggtggt ggagcgggaa cctctggcag gacatggagc tcaaggtgta
     1561 cggtcacgcg gggaagccgg tggtcgtctt cccctcctcg ggcggtcggt tccacgagta
     1621 cgaggatttc gggatggtcg aggcgtgccg gcccttcatc gacgcgggcg ccgtcaccct
     1681 cttcaccctg gacagcgtgg acgggcagtc gtggctgaac aaggaagctc cgcccgcgga
     1741 gcgcgcgcgg aggcacaacg actacgaccg gtacgtcgtc tcggaggcgg tccccttcat
     1801 ccggggacgg tgcccgaacg cttccggatt tctcgcgacg gggtgcagca tggggggata
     1861 ccactccgcg aacttcttct tccgccaccc cgacgtcttc gacgccgtga tcgccctgtc
     1921 cggcgtgtac aagctcaccc ggttcatcgg gaacgccatg gacgagaacg tctacttcaa
     1981 cacgcccctc gcttacctgc cggcgctttc cgatccgtgg tacctggacc ggtaccgccg
     2041 cagccggatc gtggtgtgcg tcgggcaggg agcgtgggag gacgagatgg tcgcggacac
     2101 ccgcgaacta caggcgatcc tcgcgtcgaa ggggatcccc gcatggatcg acttctgggg
     2161 gcacgacgtc aaccacgact ggccgtggtg gcgccgccag atgccgtact tcctggtcac
     2221 ctgtacccgt agccggccgg ccccaccgcc ggggggctat ttccctttcc gctccatttt
     2281 cgccttcagg gcttccccca gggaaccgag tgccggggga gcgggcggcg gggcgagata
     2341 cttcgcat
//
LOCUS       DATGYW010000715         4539 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_213800, whole genome shotgun sequence.
ACCESSION   DATGYW010000715 DATGYW010000000
VERSION     DATGYW010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 4539)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4539)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4539
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213800"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VK429_10055"
     CDS             complement(<1..332)
                     /locus_tag="VK429_10055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015743239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide-binding protein"
                     /protein_id="HLN92180.1"
                     /translation="MARKNPVNRPAASSKFEELMTGTTVFNVPLPADLKTLKGMSPIV
                     IKQPYNIDYIHSYGQDSPFFAGLSNRKLLGTKCGKCNYTWANPRLACTHCGGETDWVE
                     LPQTGRVHT"
     gene            complement(335..1621)
                     /locus_tag="VK429_10060"
     CDS             complement(335..1621)
                     /locus_tag="VK429_10060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015743238.1"
                     /note="Catalyzes the synthesis of acetoacetyl coenzyme A
                     from two molecules of acetyl coenzyme A. It can also act
                     as a thiolase, catalyzing the reverse reaction and
                     generating two-carbon units from the four-carbon product
                     of fatty acid oxidation; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase domain-containing protein"
                     /protein_id="HLN92181.1"
                     /translation="MRPVYMVSGGVSKFAKARPDATFQKIVKESFDYAMNDVPKLKHS
                     MIDGSVVSYFSDHFTRQLMAGIMATDYLGLCPKPNKRIEGGGATGGLCFQAGWEAVAS
                     GRMNVCAAFGFETMSHVPTWKGNEFIALASDVNFDYPVGGFYSGYYAMMVNRHMHEFG
                     TTVEQLAMVSVKNHMNAYGNPYAQKRRKLTIADVRNSAMVAYPLTLLDICVMSDGAAT
                     CILADEETAFKLTDHPVKITGVGTGTDMMRMADRPHGEVILAPNEKKSDYGNLKYPGV
                     HSFRAGRSAGLQAYRMAGITDPLKQLDFVELHDAYTSSEIQTYEDLALCKYGEGGKFV
                     EAGYPFMPQIDYGMKLPKKGAIPVNPSGGLIACGHPVGATGLMQAVFAFWQIQGSIKK
                     HYGSSELQLKKANRGLIHSHAGTGTYVTVSIMERGW"
     gene            complement(1677..2123)
                     /locus_tag="VK429_10065"
     CDS             complement(1677..2123)
                     /locus_tag="VK429_10065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012828873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HLN92182.1"
                     /translation="MATAKGKSAAATPKKAARKVRILVGKPGLDGHDRGAKIIARALR
                     DAGVEVIYTGLHQTPEMIVSAAAQEDVDGIGLSILSGAHNYLFPRIIQLLREKKMGDV
                     VLFGGGIIPDDDIPKLMKKGVDRVFTPGTPIQEIVDYVNERIQPRK"
     gene            complement(2149..3831)
                     /locus_tag="VK429_10070"
     CDS             complement(2149..3831)
                     /locus_tag="VK429_10070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013822460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HLN92183.1"
                     /translation="MYDRKKLAGIATRRKKWQDETLAPSLRKSPPRLDRFSTVSDEEI
                     DLLYTPDPLSNFEYDEDLGYPGQYPYTRGVQPTMYRGRLWTMRQFAGFGSAEDTNARF
                     KFLLSQGQTGLSTAFHFPTLMGYDSDSPRARGEVGMCGVAVDSLKDMEILFDGIPLDK
                     VTTSMTINGPAAMVFAMYLAVAEKQGVPFHKLGGTIQNDILKEYIAQHSWIFPPEPSM
                     RIITDILGYCADNVPRWNTISISGYHIREAGSTAVQELAFTIADGIAYVQAGIDAGIP
                     VDKFAPRLSYFFNAHMDFFEEIAKYRAARRMWARIMRERFHAKDENSWKLRFHTQTAG
                     CTLTAQQPMNNVVRVALQALSGVLGGTQSLHTNSMDETLALPTEQAVTVALRTQQIIA
                     EESGVANTIDPLGGSFFVEQLTNAMEEKALEYIRKIDEMGGMVAAIKQGYPQREVADA
                     AFHFQRLVDAGKKRIVGLNAYRSQEEIPIPLLKIDDRVEKQQVARTREVRRKRDAKKA
                     RACLSALKEGSLTPSENLMPLLVNAAREYVTLGEMCDTLRETMGVYTDPAMF"
     gene            complement(4000..4539)
                     /gene="cobO"
                     /locus_tag="VK429_10075"
     CDS             complement(4000..4539)
                     /gene="cobO"
                     /locus_tag="VK429_10075"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006522536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HLN92184.1"
                     /translation="MSGGAIGKGYVQVYTGNGKGKTTASLGLAVRAAGHGLKTVIIQF
                     MKGWIDYGELAGVRMLAPHVEIHQAGRDTFVNRKNPDPEDILLAREGWKLAREIISGR
                     KADIVVLDEINCAMDFGLLPVGEVLEAIQGKPDGMELVLTGRGAPPEIVEAADLVTEM
                     REIRHYYTKGVDARVGVER"
BASE COUNT          711 a         1499 c         1387 g          942 t
ORIGIN      
        1 gtgtggaccc tccccgtctg cgggagttcc acccagtcgg tctccccgcc gcaatgcgtg
       61 cacgccagcc ggggattcgc ccaggtgtag ttgcacttcc cgcacttcgt cccgagaagt
      121 ttcctgttgg agagtcccgc gaagaagggg gagtcctgtc cgtaggaatg gatgtagtcg
      181 atgttgtacg gctgcttgat gacgatgggg gacatcccct tgagcgtctt gaggtccgcg
      241 ggcagcggga cgttgaacac cgtcgtcccg gtcatcagtt cctcgaattt cgaagaggcc
      301 gcgggccgat tcaccggatt ctttctcgcc atggtcacca cccccgttcc atgatcgaca
      361 cggtgacgta ggtccccgtg cccgcgtggc tgtggatcag cccgcgattg gccttcttca
      421 actgcagctc cgagctgccg taatgcttct tgatgctccc ctggatctgc cagaaggcga
      481 atacggcctg catgagcccc gtggccccga ccgggtggcc gcaggcgatc aagccgccgg
      541 aggggttcac ggggatagcc cccttcttcg ggagcttcat cccgtagtcg atctgcggca
      601 tgaaaggata ccccgcctcc acgaacttac cgccttcgcc gtacttgcac aatgcgaggt
      661 cttcgtacgt ctggatctcg gaagaggtgt aagcgtcgtg gagttcgacg aagtcgagct
      721 gcttcagcgg gtcggtgatc ccggccatcc tgtaggcctg gagcccggcg cttcgtcccg
      781 cccggaagga gtggacgccg ggatatttga ggtttccgta gtcgctcttc ttctcgttcg
      841 gggcgagaat cacctcgccg tgcggccggt ccgccatgcg catcatgtcg gtgccggtcc
      901 cgacgccggt gatcttcacg gggtggtccg tgagcttgaa cgccgtctcc tcgtcggcga
      961 ggatgcaggt ggcggcgccg tcggacatca cgcagatgtc gagaagggtc aggggatagg
     1021 cgaccatcgc ggagttccgc acgtcggcga tggtcagctt gcggcgtttc tgggcgtacg
     1081 ggttgccgta ggcgttcatg tggtttttca ccgacaccat cgcgagctgc tcgaccgtgg
     1141 tgccgaactc gtgcatgtgc cggttcacca tcatcgcgta gtacccggaa tagaacccgc
     1201 ccaccgggta gtcgaagttc acgtcggagg ccagcgcgat gaactcgttc cccttccacg
     1261 tcgggacgtg ggacatcgtc tcgaaaccga acgccgcgca gacgttcatc cgccccgagg
     1321 cgaccgcttc ccaccccgcc tggaaacaga gaccgcccgt ggcgccgccg ccctcgatcc
     1381 gcttgttcgg cttcgggcaa aggcccaggt agtcggtcgc catgatcccc gccatgagct
     1441 ggcgggtgaa gtggtcggag aagtaggaga ccaccgatcc gtcgatcatg gagtgcttga
     1501 gtttcggaac gtcgttcatc gcgtagtcga acgactcctt cacgatcttc tggaacgtcg
     1561 cgtccgggcg ggccttcgcg aatttgctca cgccgccgga aaccatgtag accggtctca
     1621 cgttcgatcc cccttgtcgg atggagtgcc ttcctcttcg cgccgatccc gccgctttat
     1681 ttccgcggct ggatccgttc attcacgtag tcgacgatct cctggatcgg ggtccccggc
     1741 gtgaacaccc ggtcgacccc cttcttcatg agcttcggga tgtcgtcgtc cgggatgatc
     1801 ccgccgccga agagcaccac gtcgcccatc ttcttctcgc ggagaagctg gatgatccgc
     1861 ggaaacaggt agttgtgcgc cccggagagg atcgacaggc cgatgccgtc gacgtcctcc
     1921 tgcgccgccg cgctcacgat catttcgggc gtctggtgca gacccgtgta gatgacctcc
     1981 acaccggcgt cgcgaagggc gcgcgcgatg atcttcgccc cccggtcgtg cccgtcgagc
     2041 cccggtttcc cgacgaggat acggactttc cgggccgcct ttttcggggt tgccgccgcg
     2101 ctttttccct ttgccgtcgc catcgctcat cctccttgat ctttgctctc agaacatcgc
     2161 cgggtcggtg tacacgccca tcgtctcccg gagggtgtcg cacatctcgc cgagggtgac
     2221 gtactcgcgc gccgcgttca ccaggagagg catcagattc tcgctcgggg tgagggatcc
     2281 ttccttcaga gcggacaggc atgcccgcgc ctttttcgcg tcgcgcttcc gccggacctc
     2341 cctcgtccgc gcgacctgct gcttctcgac ccgatcgtcg atcttcagca gcgggatcgg
     2401 gatctcctcc tgcgaccggt acgcgttgag gccgacgatc cgcttctttc ccgcgtcgac
     2461 cagtcgctgg aaatggaagg cagcgtcggc cacctcccgt tgaggatacc cctgtttgat
     2521 cgcggccacc atcccgccca tctcgtcgat cttccggatg tactccaacg ccttttcttc
     2581 catcgcattc gtcagctgtt ccacgaagaa cgacccgccc agagggtcga tggtattggc
     2641 gacgcccgac tcctcggcga tgatctgctg ggtccgcagc gcgacggtca cggcctgctc
     2701 ggtgggaagc gccaacgtct cgtccatcga gttggtgtgg agcgactgcg tccctccgag
     2761 gacccccgaa agagcctgca gtgcgacccg caccacgttg ttcatcggct gctgcgcggt
     2821 gagcgtgcac cctgccgtct gggtgtggaa ccggagtttc cacgaattct cgtccttcgc
     2881 gtggaaccgc tcccgcatga tccgcgccca catccggcgc gcggcacggt acttcgcgat
     2941 ctcctcgaaa aagtccatgt gggcgttgaa gaagtacgag agccgtgggg cgaatttatc
     3001 cacgggaatc cccgcgtcga ttcccgcctg gacataggcg atcccgtcgg cgatcgtgaa
     3061 ggccagctcc tggaccgccg tggatcccgc ttccctgatg tggtaaccgc tgatgctgat
     3121 cgtgttccat ctcgggacgt tatcggcgca gtaaccgagg atgtcggtga tgatccgcat
     3181 cgacggctcc ggggggaaga tccaggaatg ctgggcgatg tattccttga gaatgtcgtt
     3241 ctggatcgtg ccgccgagct tgtggaaggg cactccctgc ttttccgcga ctgccaggta
     3301 catggcgaag accatcgccg ccgggccgtt gatcgtcatc gacgtggtga ccttgtctag
     3361 cgggatcccg tcgaacagga tctccatgtc cttcagggaa tcgaccgcga cgccgcacat
     3421 tcccacctct cccctcgcgc ggggggagtc cgaatcgtat cccatgagcg tgggaaagtg
     3481 gaacgcggtg gaaagccccg tctgcccctg cgagaggagg aacttgaacc gggcgttcgt
     3541 atcctccgcc gacccgaacc cggcgaactg gcgcatcgtc cacagccggc cgcgatacat
     3601 cgtgggctga accccgcggg tgtacgggta ctggccgggg tacccgagat cctcatcgta
     3661 ttcgaagttc gaaaggggat cgggggtgta cagcaggtcg atctcctcgt cggagacggt
     3721 ggagaaccga tcgagtcgcg gcggcgattt ccgaaggctc ggcgccagcg tctcgtcctg
     3781 ccacttcttc ctgcgggtcg cgatccccgc gagctttttc ctgtcgtaca tggcgcctcc
     3841 aaatagtgcc gcattacata aatacttcaa ctcggctgcg ccgcctcgga gaggcggtta
     3901 cgttcgtggc tcgccgtgca atgaacctgc acggctgcgc tttacctcac tacgcccccc
     3961 tcctgcggcg gctccgcagg accctcctgt gcggttggct catcgttcca cgcccacgcg
     4021 ggcgtccacg cccttcgtgt aatagtgccg gatctcgcgc atctcggtga cgagatccgc
     4081 cgcctcgacg atctccggcg gggcgccgcg tcccgtgagg acgagttcca tcccgtcggg
     4141 cttcccctgg atcgcctcga ggacctcccc tacggggagg aggccgaaat ccatcgcgca
     4201 attgatctcg tcgagaacca cgatatccgc cttccggccc gagatgatct ccctcgccag
     4261 tttccagcct tcccgggcaa ggagaatgtc ctccggatcc gggttcttcc ggtttacgaa
     4321 ggtgtcgcgt cccgcctggt ggatctcgac gtggggggcg agcatccgga cccccgcgag
     4381 ttcgccgtag tcgatccacc ccttcatgaa ctggatgatg accgtcttca gcccgtggcc
     4441 ggcggcgcga actgcgagcc cgagggaggc ggtggtcttt cctttcccgt tcccggtgta
     4501 gacctggacg taccctttcc cgatcgcccc tccgctcac
//
LOCUS       DATGYW010000716         2062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_105584, whole genome shotgun sequence.
ACCESSION   DATGYW010000716 DATGYW010000000
VERSION     DATGYW010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105584"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..772)
                     /locus_tag="VK429_10080"
     CDS             complement(50..772)
                     /locus_tag="VK429_10080"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HLN92185.1"
                     /translation="MSRELAGLIRMGRNAFSETECLRAERHLLEALEGGAKYPDIHYT
                     LGLIDHQRGNYRRAVERFGQAVSLNPDYTEALLSLSITLNDMGRYDEARDAYDRAAGI
                     LYRKGGSPGVNMFRGRIANLHKELGELYLALGQHDDAIREYRRALSVAPKYPDLRVRL
                     VTALREAGRTDEARDEVDAFLTETPGNAAALIQKGILHYLAGEQAPALRAWEEALYKD
                     PLNKIVQVYLNTLDRGNPPGPG"
     gene            complement(855..>2062)
                     /gene="bamD"
                     /locus_tag="VK429_10085"
     CDS             complement(855..>2062)
                     /gene="bamD"
                     /locus_tag="VK429_10085"
                     /inference="COORDINATES: protein motif:HMM:TIGR03302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HLN92186.1"
                     /translation="FQVLLERFPTSPLAARAQFGLATNRMANKEEIEAEVAFDDFLRL
                     YPADPKVPDALLMKGDLLSRQVMPPGRDQGKTREAIKAYTLFLEREPGTPRAREVSGK
                     ILELRNRLALHEATVVQHYITRKKFESAEARARRAIATYPDVPVAPTLFTLLVRSLEK
                     QGKKDDAEIARKALAEKYPDAGGKKQVAVSSLAREYQMKMPHRVRRGRYEITLQPRYV
                     ASKDIDVVGGSKLELDPGLGFGLGFGYNFTNKVALHLDGSWTRADYQAKITTTDSSGI
                     STVPTTVGGTLDTTTVALNLSYYFLDGPLTPFLMGGIGWTFVNSNIPSGPPQGVCWYD
                     PWYGYVCDSYQNTYTKDYFSYNLGVGGRWDVIPGIFLRGSVGWQWVDLGRAETTGFMG
                     GRLDLGYMF"
BASE COUNT          307 a          695 c          676 g          384 t
ORIGIN      
        1 ctcgcctcga tctctacgtg ggaatgagcg ccccgcggct tcgcggcgtt tacccgggcc
       61 cgggcgggtt tccccggtcg agggtgttca ggtacacctg cacgatcttg ttgagcggat
      121 ccttgtaaag cgcctcttcc cacgcgcgga gcgccggcgc ctgttccccg gcgagatagt
      181 gcaggatccc cttctggatg agcgccgccg cgtttccggg ggtctccgtg agaaacgcgt
      241 ccacctcgtc ccgtgcctcg tccgtccgcc ccgcttcccg gagcgccgtc accagccgaa
      301 cccggaggtc cgggtacttc ggcgcgacgg agagggcgcg gcggtattcg cggatcgcgt
      361 cgtcgtgctg gcccagcgca aggtagagtt ccccgagctc cttgtgcagg ttcgcgatcc
      421 gcccgcggaa catgttcacc ccgggcgatc cccccttccg gtagaggatc ccggcggcgc
      481 ggtcgtaggc gtcccgcgcc tcgtcgtacc ggcccatgtc gttcagcgtg atggagaggg
      541 aaaggagcgc ttcggtgtag tcggggttga gggagaccgc ctgtccgaac cgctcgaccg
      601 cccgccggta attcccccgc tggtggtcga tcaggcccag cgtgtagtgg atgtcggggt
      661 atttcgcgcc gccctcgagg gcctcgagca ggtgacgctc ggcccgcagg cactccgtct
      721 cgctgaaggc gttcctgccc atccggatca gcccggccag ttcccggctc atcgcgccat
      781 ggcaccgacg actactgcga cattcctcgt ctgaaacatc gtgtcctcca ctcttccgcc
      841 gtcctccggc ccgttcagaa catgtagccg aggtccagcc gcccgcccat gaagcccgtg
      901 gtttccgccc ggccgagatc gacccactgc caccccacgc tgcctcgcag gaagatgccg
      961 gggatcacgt cccagcgccc gccgacccca agattgtacg agaaataatc cttggtgtag
     1021 gtgttctggt aggagtcgca gacgtagccg taccaggggt cataccagca gacgccctgt
     1081 ggggggcccg aagggatgtt cgagtttacg aacgtccaac cgatcccccc catgaggaag
     1141 ggggtcaacg ggccgtccag gaagtagtag ctcaggttga gggcgaccgt ggtggtgtcc
     1201 agggtgccgc cgaccgtcgt cgggacggtg gaaatcccgc tgctgtcggt cgtggtgatc
     1261 ttcgcctggt agtccgcccg ggtccatgac ccgtcaaggt gcagggcgac cttgttggtg
     1321 aagttgtagc cgaatcccaa tccgaaaccg agtcccgggt cgagctcgag cttcgaccct
     1381 ccaacgacat cgatatcctt ggaagcgacg tagcgtggct ggagggtgat ctcgtaccgg
     1441 ccccggcgga cccggtgcgg cattttcatt tgatactccc tggcgaggct ggagacggca
     1501 acctgcttct tcccccccgc atcgggatac ttctccgcca gcgccttccg ggcaatctcc
     1561 gcgtcgtcct tcttcccctg tttttcgagc gaccgcacga gcagggtgaa gagggtcggg
     1621 gcgaccggca cgtcggggta cgtcgcgatg gcccgacggg cccgcgcctc ggcgctttcg
     1681 aactttttcc gggtgatata gtgctgcacc acggtcgcct cgtgcagggc gagccggttt
     1741 cgcagctcga ggatcttccc ggagacttcc cgggcgcgcg gggtgcccgg ctcccgctcc
     1801 aggaacagcg tataggcctt gatcgcctcc cgcgtcttcc cctggtccct cccgggcggc
     1861 atgacctgcc gggagagcag gtcacccttc atgagcaggg cgtcgggaac cttcgggtcc
     1921 gcggggtaga ggcgcaggaa atcgtcgaac gccacctcgg cctcgatctc ttccttgttg
     1981 gccatccggt tcgtggcgag accgaactgc gcccgcgccg ccagcgggga ggtggggaac
     2041 cgctcgagga ggacctggaa gg
//
LOCUS       DATGYW010000717         3480 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_214079, whole genome shotgun sequence.
ACCESSION   DATGYW010000717 DATGYW010000000
VERSION     DATGYW010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3480
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_214079"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1470
                     /locus_tag="VK429_10090"
     CDS             <1..1470
                     /locus_tag="VK429_10090"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HLN92187.1"
                     /translation="VSADPPALLALMARADAAAGKLGSALALYGRAVAATADPQASRR
                     LSAERESVIDGAKDLSALRGAAEGEEDPEVRGPLYLAMGNAAIRKGFLGMAAYAFEQS
                     ARAGGKRSVEAAEHLFRAEKIIAARPRIVGLVPLSGKLSDIGYAVLTGAEVALGALHG
                     FDRNGATPVIRWVDTAGQAEKARMEFTVAAADPMVLGILGPVTGEEGRSVGAAFTQKS
                     PPTLYFGQKQILEKPFLYGFGLSPAQEARALLAHLARAGISDLLLFHPENGYGNGFAA
                     ATAAAAREAGVRIAKTVPYSPEAQDFTETIRKAVGNATFQRQSRSKEKGKAMKLPLGG
                     IIIADRWDRVFLLASQLRYYNVYLPLAGFSGWNDPELLRKAVGSVSGAVFPVDYSDVI
                     PGLQGDRFRKVFQEVMGVPPTRFEALGYDGAYFLSEAFSLEGGSGRSMGEAMREKIPR
                     LKNYPGVTGTFQFTPAGDLRRKVPLLQVELGNFVPVPTP"
     gene            1476..>3480
                     /locus_tag="VK429_10095"
     CDS             1476..>3480
                     /locus_tag="VK429_10095"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF024703.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HLN92188.1"
                     /translation="MPGDLARKVGMSLSPDGPIARAMPGFESRPGQLRMALAWAGALE
                     TPRVLIAEAATGIGKTLAYLIPAILSGRKTIVSTGTRTLQQQLMENDIPLVRDILQYP
                     FSCAVLKGRGNYLCLRRWKRFRVEPLFEFAREAGYFSAMQAFAETTRTGDVSECIGVP
                     EDARVWGEVNARSEMCDASTCGETERCHLAAARRRAADADLVVVNHHLFFADLALRER
                     LGPGRGGEEGRFGEVLPRADAVVFDEAHGVEETASVFFGVTVSLGRARELALDVKRSA
                     AKAGGGWNALPPMAERFRLVAESAFDAVGNGEARFALPAPSAGTPFGEKASALLRAGE
                     ELALSLSDGIPHGERGSGAAGPDPGTDRDPLLRRVRSFIDDLDAVLSSDSASAVAWAE
                     RRGASVSLHRTPVEVSPVLSGALWGEPIPFLLTSATLSISGDLSYFRERVGLARVDAR
                     ELIVDNEFDFAGRALFYVPQGLPDPSDSAFPAAAAEETREILSCSGGGALVLCTSYRT
                     LSALTEVLRGTLPHVLYVQGDAPRAHLLRAFREGEDTVLIGTGTFWEGVDVPGASLRC
                     VVIDKLPFASPSDPVTSARIRAMRDRGEDPFMEYQLPEAVLSLRQGVGRLLRRGDDYG
                     VVALLDRRISTRGYGELFRTNLPPARWTDDRAEVAAFFRRFHGE"
BASE COUNT          464 a         1179 c         1285 g          552 t
ORIGIN      
        1 gtgagcgcgg accctccagc gctcctggcc ctgatggcgc gtgcggatgc cgcggcagga
       61 aagctgggaa gcgcgcttgc gctgtacggc cgcgccgtcg ccgccactgc ggacccgcag
      121 gcatcgcggc ggctgtcggc cgagcgggaa tcggtcatcg acggcgcgaa ggacctttcg
      181 gcgctgcggg gggcggccga gggggaggag gatccggagg tccgcggtcc cctgtatctc
      241 gcgatgggga acgcggcgat ccggaagggg ttcctcggga tggccgccta cgcgttcgag
      301 caatcggcgc gggcgggggg gaaacgttcc gtcgaggccg cggagcacct gttccgggcc
      361 gagaagatca tcgccgcgcg cccgcggatc gtgggcctcg tcccgctctc gggaaagctc
      421 tccgacatcg ggtacgcggt cctcaccggg gcggaggtgg ccctcggcgc gctccacggg
      481 ttcgaccgga acggcgccac gccggtcatc cggtgggtgg acacggcagg gcaggccgag
      541 aaggcgcgaa tggagttcac cgttgccgcg gcggacccga tggtgctcgg catcctcggc
      601 ccggtcaccg gagaggaggg ccggtcggtc ggcgccgcgt tcacgcagaa atcgccgccc
      661 acgctgtact tcggccagaa gcagatcctt gaaaagccgt ttctctacgg gttcggactc
      721 tccccggcac aggaggcgcg ggcgctgctc gcgcacctgg cgcgggcggg gatttccgac
      781 ctgctcctgt tccacccgga gaacggctac gggaacgggt tcgccgccgc caccgccgcg
      841 gccgccaggg aggcgggggt ccggatcgcg aagaccgtgc cgtattcccc ggaggcgcag
      901 gacttcacgg agacgatcag aaaggcggtc ggcaacgcga ccttccagcg ccagtcgcga
      961 tcgaaggaga aggggaaggc gatgaagctt ccgctggggg ggatcatcat cgcggaccgg
     1021 tgggatcggg tcttcctcct tgcgtcgcag ctgcgctact acaacgtcta tctcccgctg
     1081 gccggcttct ccgggtggaa cgaccccgaa ctgctgcgga aggcggtcgg ttccgtctcc
     1141 ggggcggtct tcccggtgga ctactccgac gtgatcccgg gcctccaggg ggaccggttc
     1201 cggaaggtgt tccaggaggt gatgggggtt ccccccaccc ggttcgaagc gctggggtac
     1261 gacggcgcct atttcctctc cgaggcgttt tcgctcgagg gcggttccgg gcgctccatg
     1321 ggggaagcga tgcgtgagaa gatcccccgc ctgaaaaatt atcccggcgt gacgggtacc
     1381 ttccagttca cccccgccgg ggatctgcgc cggaaagtcc ccctcctgca ggtcgagctg
     1441 gggaacttcg tccccgtccc gacaccgtaa agcgcgtgcc cggagatctc gcccgaaaag
     1501 tggggatgtc gctctccccc gacggcccga tcgcgcgggc gatgccgggg ttcgagtcgc
     1561 gaccggggca gctccggatg gcgctcgcgt gggcgggggc gctcgaaacg ccgcgcgtgc
     1621 tgatcgccga ggcggccacc gggatcggca agacgctggc gtacctcatc ccggcgatcc
     1681 tctccggccg gaagaccatc gtctccaccg gcacgcgcac cctccagcag cagttgatgg
     1741 aaaacgacat ccccctggtg cgggacatcc ttcagtatcc cttctcgtgc gccgtcctca
     1801 aaggccgcgg caactacctc tgcctgcgcc gctggaagcg gttccgcgtc gagccgctct
     1861 tcgagttcgc ccgggaggcc ggctacttct ccgcgatgca ggcgttcgcg gagacgaccc
     1921 gcacggggga cgtctccgag tgcatcgggg tgcccgagga cgcgcgcgtc tggggagagg
     1981 tgaacgcccg cagcgagatg tgcgacgctt cgacgtgcgg cgagaccgag cggtgccatc
     2041 tcgcggcggc ccggcggcgg gcggcggacg ccgatctcgt cgtggtgaac caccatctgt
     2101 tcttcgcgga cctggcgctg cgcgaacggc tcggtccggg ccgcggaggg gaagaggggc
     2161 ggttcggcga ggtgcttccc cgcgccgacg ccgtggtatt cgacgaggcg cacggagtgg
     2221 aggagaccgc ctccgtcttt ttcggcgtga ccgtatccct tggtcgcgcc cgggagcttg
     2281 cgctggacgt taagcgttcc gccgcgaagg cgggcggcgg gtggaacgct ctcccgccga
     2341 tggccgagcg gttccgcctc gtcgccgaat cggctttcga cgcggtggga aacggggaag
     2401 cccgctttgc gctgcccgca ccctccgccg gtaccccgtt cggggagaag gcgtcggccc
     2461 tgctccgcgc tggggaggaa ctcgccctgt ccctctcgga cggcattccc catggggaga
     2521 ggggctccgg cgcggcgggc ccggatccgg ggacggaccg ggatcccctt ctccggcgcg
     2581 tccgctcctt catcgacgac ctcgacgcgg tcctctcctc cgactccgcc tccgccgtgg
     2641 cgtgggcgga gcggcgcggc gcgtccgtct ccctgcaccg gacgccggtc gaggtctccc
     2701 cggtcctttc cggagcgctg tggggggagc cgattccgtt cctgctcacc tcggcgaccc
     2761 tctcgatctc gggcgacctg tcgtatttcc gggaacgggt gggactcgcc cgggttgatg
     2821 cccgggaact catcgtggat aatgagttcg acttcgcggg gcgggcgctc ttctacgtcc
     2881 cgcaggggct tcccgacccg tcggactccg cgttcccggc cgcggccgcg gaggagacga
     2941 gggagatcct gtcgtgctcc ggcggcggcg cgctggtcct gtgcacgagc taccggacgc
     3001 tctcggcgct gacggaggtg ctgcggggga cgctcccgca cgtcctgtac gtacaggggg
     3061 acgccccgcg ggcgcacctc ctgcgggcgt tccgggaggg cgaggacacg gtgctgatcg
     3121 ggacggggac gttctgggaa ggggtggacg ttccgggggc ctccctgcgg tgcgtcgtca
     3181 tcgacaagct gccgttcgcc tccccgtccg accccgtgac ctcggcccgc atccgggcga
     3241 tgcgcgaccg cggagaggac ccgttcatgg agtaccagct ccccgaggcg gtcctttcgc
     3301 tgcggcaggg cgtcgggagg cttctccgcc gcggggacga ttacggggtg gtggcgctgc
     3361 tcgaccgcag gatttcgacc cgggggtacg gcgagctctt ccggaccaac cttcccccgg
     3421 cgcggtggac ggacgaccgg gccgaggtgg cggcgttctt ccgccggttc cacggagaga
//
LOCUS       DATGYW010000718         1640 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_371564, whole genome shotgun sequence.
ACCESSION   DATGYW010000718 DATGYW010000000
VERSION     DATGYW010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371564"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..>1640
                     /gene="glgP"
                     /locus_tag="VK429_10100"
     CDS             266..>1640
                     /gene="glgP"
                     /locus_tag="VK429_10100"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HLN92189.1"
                     /translation="MRIRHFHVRPNIPKELAPLEEIARNLWFSWNWEAVQLFIRLNPV
                     LWEQAYQNPVQMLGTLPQADLEAAAKDESFVAIVERVYRSFQEYRKRGSWFQEAHSAD
                     AGARVAYFSCEYGIDEGLPIYSGGLGVLSGDHLKSASDLGVPLVGVGLLYQKGYFRQV
                     LSLDGWQKELYPDNDWYNMPVTMEKTPEGRPLEITVNVGGEMVRARIWRVDVGRTPLY
                     LLDSNIKGNSERSREITSTLYGGDRDMRIRQEILLGVGGVRALKALGIQPTVYHMNEG
                     HSAFLIVERIRDLMASNGLTFAQAREVVLASGVFTTHTPVPAGNERFEPDLLRKYLEP
                     KVRPLGIPWEEFLALGQSGTPRSREFGMTVFALRSSAFANGVARLHAETSRAMWKELW
                     PELPEGEVPIRAITNGIHTRSWLSHEMAELYTRYFGPRFLEKPADHAVWERAEEIPPG
                     ELWRIHQS"
BASE COUNT          305 a          493 c          545 g          297 t
ORIGIN      
        1 atcgtgatca tcaagctgat gaataaggaa gtcgtagttc gttaatactg cggtttggca
       61 ggttaccggg cgctgcccag gaacagggcg gcgccttttt catttggtgg aggcgatgtg
      121 taaatccact tccgaaacgc actctctatc aaggtgaatc aataatcggg aggcaggtca
      181 agaggcgacc aaatcagtgt cgaattgact tgtcccctcc gcctgatgtt tcatggtgga
      241 cacgacttct ctcaacgagg tatccatgcg catccgtcat ttccacgtcc gaccgaacat
      301 cccgaaggaa ctcgctccgc tcgaggagat cgcccggaac ctctggttct cgtggaactg
      361 ggaagcggtg cagctcttca tccggctgaa tcccgttctc tgggagcagg cgtaccagaa
      421 tcctgttcag atgctcggga cgctgccgca ggcggacctt gaagccgccg cgaaggacga
      481 gagcttcgtc gcgatcgtcg agcgggtgta ccggtcgttc caggagtaca ggaagagggg
      541 gtcgtggttc caggaggccc actcggcaga cgccggcgcc cgggtggcct atttttcgtg
      601 cgagtacggg atcgacgaag ggctcccgat ctactccggg gggctcggag tcctctcggg
      661 ggaccacctg aagtcggctt ccgacctcgg ggtcccgctc gtcggcgtcg ggctcctgta
      721 ccagaaggga tatttccgcc aggtgttgtc cctggacggg tggcagaagg agctgtaccc
      781 ggacaacgac tggtacaaca tgccggtaac gatggagaag acaccggagg gccgccccct
      841 ggagatcacg gtgaacgtcg gcggcgagat ggtgagggcg agaatctggc gggtggacgt
      901 cggccgcact cccctgtacc tcctcgacag caacatcaag ggaaactccg agcgttcccg
      961 ggagatcacc tcgaccctct acggggggga ccgggacatg cgcatccggc aggagatcct
     1021 gctcggcgtt ggaggagtgc gtgcgctgaa ggccctcgga atccagccga ccgtgtacca
     1081 catgaacgag gggcactccg cgttcctcat cgtcgaacgg atccgcgacc tgatggcgtc
     1141 gaacggcctc accttcgcgc aggcgcggga ggtggtgctc gcctccggcg tcttcaccac
     1201 ccacactccc gtccctgcgg ggaacgaacg gttcgagccg gacctgctgc ggaaatacct
     1261 cgagccgaag gttcgacccc tggggatccc gtgggaggag ttcctcgccc tgggccagtc
     1321 gggcaccccg cggtcgaggg agttcgggat gacggtgttc gcactccggt cgtcggcgtt
     1381 cgcgaacggc gtggcaaggc tccatgccga aacctcccgg gcgatgtgga aggagctgtg
     1441 gccggagctc cccgaggggg aggtcccgat ccgcgcgatc accaacggga tccacacccg
     1501 ttcctggctc agtcatgaga tggcagagct gtacacgcgg tacttcgggc cgcggttcct
     1561 cgagaagcct gcggaccatg cggtgtggga gcgggcggag gagatccctc ccggagaact
     1621 ctggcggatc caccagtccc
//
LOCUS       DATGYW010000719         1643 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_371865, whole genome shotgun sequence.
ACCESSION   DATGYW010000719 DATGYW010000000
VERSION     DATGYW010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371865"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..997
                     /locus_tag="VK429_10105"
     CDS             <1..997
                     /locus_tag="VK429_10105"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HLN92190.1"
                     /translation="RQAALKEAATTFYDILLAREMNAISLENRDQKTRFLDEAQKKNA
                     AGTATDYDVLVAKVGLENAMPVIVRTENHLLSLRERLRFLLGRDGRPVDVRGDLATEI
                     APYPEYGKALATAVENRPELADIRHRIGITEELVTIAQAGTMPRLDVQADLGWRDSSL
                     GGFDASGKVWSAGVYASWPLFDGLRTRGRVAQARSDQATLRIEEAQLLDGIALQVRDA
                     TNAVRDAGEVVRAIADTVGQAERLLALAEKGYEYGVKTKLEVDDANFNLNQARVNLAQ
                     ARRDYLVANLNLRYAMGTLGEEWTASYDTVKTFSPATSPVGVAREVLEGQPALAR"
     gene            1056..>1643
                     /locus_tag="VK429_10110"
     CDS             1056..>1643
                     /locus_tag="VK429_10110"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HLN92191.1"
                     /translation="MAIDINIRVTGGAGQGVHTAGGLLCRLAVASGHHFHATQDYMSR
                     IRGGRNSYSVRMREIPVRAGRPLADIVLPLDPGSLPHILSSVGPAGIVVCDLPTGAEG
                     SADPRVIAAPLKELAVAAGSPILENIVGAGIVACLLGIPPETVDRVLALEFKGDFLEK
                     NREAARRGGEWADPRVPPGYRLPSAEFQPRMILAGN"
BASE COUNT          268 a          533 c          608 g          234 t
ORIGIN      
        1 gcggcaggcg gcgctgaagg aggccgccac gacgttttac gacatcctcc tggcccgcga
       61 gatgaacgcc atctccctgg agaatcggga ccagaagacg cggttcctcg acgaggcgca
      121 aaagaagaac gccgcgggga cggcgacgga ctacgacgtc ctggtggcga aggtgggcct
      181 tgagaacgcg atgcctgtga tcgtgcgcac ggagaaccac ctcctttccc tccgtgagcg
      241 gctccggttc ctgctggggc gggacggccg tccggtcgac gtgcgcgggg acctcgcgac
      301 ggagatcgcc ccctacccgg aatacgggaa ggccctggcg accgcagtgg agaaccgccc
      361 ggagttggcg gacatccgcc accggatcgg gatcacggaa gagctggtga cgatcgcgca
      421 ggcggggacc atgccgcggc tggacgtcca ggcggacctc ggctggaggg acagcagtct
      481 cgggggcttc gacgccagcg gcaaggtctg gtccgcgggg gtgtacgcct cgtggccgct
      541 gttcgacggg ctgcgcaccc ggggccgggt cgcccaggcg aggagcgacc aggcgacgct
      601 gcgcatcgag gaggcccagc tcctcgacgg gatcgccctg caggtccggg acgcgacgaa
      661 cgccgtccgg gatgcggggg aggtcgtccg ggcgatcgcc gacaccgtcg gacaggcgga
      721 gcgcctcctg gccctcgcgg agaaagggta cgagtacggt gtgaagacga agctggaggt
      781 ggacgacgcc aatttcaacc tcaaccaggc gcgggtcaac ctcgcgcagg cgcgccgcga
      841 ttatctggtc gccaacctga acctccggta cgcgatggga acgcttgggg aggaatggac
      901 ggcgtcgtat gatacggtaa agacgttttc ccccgcgacg tccccggtcg gggtggcgcg
      961 cgaagttctg gagggccagc cggcgctcgc caggtagccg tcgtgggggc aacgttcccg
     1021 ctggcgggtt catctgaaga actcgaggac gcagcatggc catcgacatc aatatccgcg
     1081 tgacgggcgg ggccggccag ggggtgcaca ccgccggcgg cctcctctgc cgccttgccg
     1141 tcgcatcggg acatcatttc cacgccacgc aggactacat gagccggatc cggggggggc
     1201 ggaactcgta ttccgtccgg atgcgggaga tcccggtccg ggcggggcgt cccctggcgg
     1261 atatcgtcct ccccctagac ccggggtctc tcccgcacat cctgtcttcg gtcggcccgg
     1321 cgggcatcgt cgtctgcgac ctcccgacgg gagcggaggg gagcgcggac ccgcgagtga
     1381 tcgccgcgcc gctcaaggaa ctggcggtcg ccgcgggatc cccgatcctt gagaacatcg
     1441 tgggggccgg catcgtcgcc tgcctgctcg gaatcccgcc ggaaacggtg gatcgggtcc
     1501 ttgccctcga gttcaagggc gatttcctcg aaaagaaccg ggaggcggcc cggcgcgggg
     1561 gcgagtgggc ggatccgcgc gtgcccccgg gataccgcct gccgtcggcc gaattccaac
     1621 cgcggatgat cctggccggg aac
//
LOCUS       DATGYW010000720         1520 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_106289, whole genome shotgun sequence.
ACCESSION   DATGYW010000720 DATGYW010000000
VERSION     DATGYW010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106289"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1020
                     /locus_tag="VK429_10115"
     CDS             <1..1020
                     /locus_tag="VK429_10115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016873375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HLN92192.1"
                     /translation="VMITGDHPRTALAVARSVGIGGDDTVVTGADLSRVTLAEIADVV
                     RRTDVYARVSPGHKLAIVSALQADGHVVAMTGDGVNDAPALRKADIGVAMGESGTDVA
                     REAADMILTDDNFATIVAAVAEGRVIYDNVRKFILYILASNVGEILVMLLGPLLGMPL
                     PLLPLQILWINLLTDGLPALALGVEPAEGDAMRRPPRPPSEGVLTRGMWAYVLGIGAL
                     LGILCLAVALPLYRAEDPSWRTALFTTLTFAQMAHVLAIRSRRETLLRRGIFTNRPLL
                     LAVAGTVLLQLAVVYAPPMQGIFRTVPLTPRVLGLCAAASAALFFALEGGKYIPGLAR
                     RRSRE"
     gene            1082..>1520
                     /locus_tag="VK429_10120"
     CDS             1082..>1520
                     /locus_tag="VK429_10120"
                     /inference="COORDINATES: protein motif:HMM:NF022751.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3109 family protein"
                     /protein_id="HLN92193.1"
                     /translation="MKIDPHVFHAKFPHHCAIDRCKSRCCRHGVWADIGEQEVILRHA
                     DLFLPYVRPEAGNSSLWFGETAEDPDCPSGMAVETNVVGDACVFFHPAHGCSLQKAAI
                     DRGRHEWEFKPRFCIMFPLVVSEGVLTVDEEMDEVWCLKDENRT"
BASE COUNT          226 a          532 c          514 g          248 t
ORIGIN      
        1 gtcatgatca cgggggacca cccgcggacc gcactcgccg tggcgcgatc ggtgggaatc
       61 gggggagacg acacggtggt caccggggcg gacctctccc gggtgaccct cgccgaaatc
      121 gcggacgtcg tccggcgaac cgacgtctac gcccgcgtct ccccggggca caagctcgcc
      181 atcgtgtcgg cgctccaggc ggacgggcac gtcgtggcga tgaccggaga cggggtgaac
      241 gacgcccccg cgctgcgcaa ggcggacatc ggggtcgcga tgggagagag cgggaccgac
      301 gtggcgcggg aggcggcgga catgatcctc accgacgaca acttcgccac catcgtcgcc
      361 gccgtcgcgg aaggacgggt catctacgac aacgtgcgca agttcatcct ctacatcctc
      421 gccagcaacg tcggggagat cctcgtgatg ttgctggggc ccctcctggg gatgccgctg
      481 ccgctcctcc cgctgcagat cctctggatc aacctgctca ccgacgggtt gccggcgctg
      541 gcgctcgggg tggaaccggc ggagggggac gcgatgcgcc gcccgccccg ccctccgtcg
      601 gagggggtgc tgacccgcgg catgtgggcg tacgtgctcg ggatcggcgc gcttctcggg
      661 atcctgtgcc tcgcggtggc cctccccctg taccgggcgg aggacccgtc gtggcggacc
      721 gccctcttca ccaccctcac cttcgcccag atggcgcatg tcctcgcgat ccgttccagg
      781 cgggagacgc tcctccgccg cggcatcttc acgaaccgcc cgcttctcct cgccgtcgcc
      841 ggcaccgtgc tcctgcagct ggcggtggtg tacgcccccc cgatgcaggg gatcttccgc
      901 accgttcccc tgaccccgcg cgtcctcggg ttgtgcgccg ccgcgagcgc cgcgctcttc
      961 ttcgcactcg agggaggaaa atatattccc ggtcttgccc gcagacgttc gcgcgaatag
     1021 aataagatct tcgtccgcca tccgcgggca actcctgcga acgctggaaa ggtgttcccc
     1081 gatgaagatc gacccgcacg tgttccacgc gaagtttccc caccactgcg cgatcgaccg
     1141 gtgcaagagc cgctgctgcc ggcacggtgt ctgggccgac atcggggagc aggaggtgat
     1201 cctgcggcac gcggacctct tcctccccta cgtacgtccc gaggcgggaa attcctccct
     1261 ctggttcggc gagacggcgg aagatcccga ctgccccagc ggcatggcgg tcgagacgaa
     1321 cgtggtcggc gatgcgtgcg tcttcttcca tccggcccac ggctgctccc tgcagaaggc
     1381 ggcgatcgac cggggccggc acgagtggga gttcaagccc cgcttctgca tcatgttccc
     1441 gctcgtggtc tcggaagggg tgctgacggt cgacgaggag atggacgagg tgtggtgcct
     1501 gaaggacgag aaccggaccc
//
LOCUS       DATGYW010000721         3710 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_371949, whole genome shotgun sequence.
ACCESSION   DATGYW010000721 DATGYW010000000
VERSION     DATGYW010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3710
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_371949"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..725)
                     /locus_tag="VK429_10125"
     CDS             complement(<1..725)
                     /locus_tag="VK429_10125"
                     /inference="COORDINATES: protein motif:HMM:NF018485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HLN92194.1"
                     /translation="MIVFAGMLCIVACLGFGRFALGMLLPSMAATLHLSYSQMGFIST
                     ANFLGYLASVLVSAHWAGRIGSRRLIFLALLTVAVSMALVSRATGFLSALLLYMITGI
                     GSGATNVPVMGLVAAWFSSRRRGRAAGFIVIGSGFAIMLSGRLIPFLNRWIGPEGWRT
                     SWLLLAGLVTAIAFVAFGLLRDGPEEKGLAPVGADDIAAPVDTGPGGTEVNIYRKGII
                     YYLGAIYFLFGYTYVIYATFIVTT"
     gene            983..2134
                     /locus_tag="VK429_10130"
     CDS             983..2134
                     /locus_tag="VK429_10130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011189435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HLN92195.1"
                     /translation="MMGRKGMVVLGVLMAVFLAGTFAQAAEPLKIGAILSVTGPASFL
                     GAPEARTLEMLVAETNKKGGVMGRQIQLIVKDSGASPEKAFSFAKQLIEEEKVFAIIG
                     PSTSGESMKIKSLAEEGKTILLSCAAAEEIVVPVAKYVFKTPQKDRDVVIRIFQQMNK
                     MKISKIGVLSSNTGFGKGGKGMIETLAPQHGITIVANEVYDKAASDLTAEVTKLKAAN
                     VEAIVNWSIEPAQAIAIKNARQIGIKAPIFLSHGFGNIKYVGIAGEAAEGVIFPAGRL
                     LVADQLPDKHPQKALLLKYKKDYMSFCSGEECSTFGGHAYDAYIILMKGIEKAKSTDK
                     EAVRTAIENLRGVVGTAGIFNFSPPDHNGLGLDAVEMLTVKNGKFAILK"
     gene            2251..3102
                     /locus_tag="VK429_10135"
     CDS             2251..3102
                     /locus_tag="VK429_10135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015402378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN92196.1"
                     /translation="MTYGTIYAIVAIGFNIIYNATGIINFAQGEFVMLGGMTAVTLHQ
                     FLPLPLAILAAVVITTIVGAIIEIVFIRWLHKPSVLRMVIITIGISILIRETALHIWG
                     ESVKTLPYFTGSSGSSINLGGVFVSSQILWVVGIGALVVAALGAFFNLTMLGRQMRAC
                     SANRDAARLCGIDAGNMVTLSFMVSAAIGALGGCIICPITYVQYDSGTPLAIKGFTVA
                     ILGGLGNSTAAVGAGMILGILESFSIMVLPTAYKEAISIAILLAILFVKPSGIFGSAE
                     AARLKEF"
     gene            3102..>3710
                     /locus_tag="VK429_10140"
     CDS             3102..>3710
                     /locus_tag="VK429_10140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015402377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HLN92197.1"
                     /translation="MGRRYFAVAAFAGLIVAIQMWTHLTGTGYYLTQLTMTAYYSLVI
                     IGLCMLIGYAGQISLGHAGFFAIGGYVTAFLTTCNLQPHRGAFVSLLEKSGALVSRHD
                     VYGGLLLTVHPWMACAAAILLTVAVAYLVGGPILKLKGHYLAMATLGIGIIVYRIALG
                     TEFLGAADGISEVPGFPLPGGLVITGDASSRVFNYYLAWGLVI"
BASE COUNT          704 a         1137 c         1216 g          653 t
ORIGIN      
        1 gtcgtgacga tgaaggtggc gtagatcacg taggtgtagc cgaacaggaa gtagatcgcg
       61 ccgaggtagt agatgatccc cttccggtag atgttcacct cggtcccccc cgggccggtg
      121 tcgacgggag ccgcgatgtc gtcggccccg acgggggcaa ggcccttctc ttcggggccg
      181 tcgcgaagca ggccgaaggc gacgaaggcg atcgccgtta cgaggccggc gaggaggagc
      241 cagctggtgc gccacccctc ggggccgatc caccggttga ggaacgggat caggcggccg
      301 gaaagcatga tggcgaaccc ggatccgatc acgatgaagc cggcggcccg tccccgcctg
      361 cggctcgaaa accaggcggc gaccaggccc atcaccggga cgttggtggc cccgctgccg
      421 atgccggtga tcatgtagag gaggagggcc gacaggaagc cggtcgcccg gctcacgagg
      481 gccatggaga cggcgaccgt cagcagcgcg aggaagatga gcctgcgcga gccgatccgg
      541 cccgcccagt gggcgcttac gaggaccgag gcgagatacc ccaggaaatt tgccgtgctg
      601 atgaacccca tctgggagta cgacaggtga agcgtcgccg ccatcgaggg caggagcatc
      661 ccgagggcga agcggccgaa accgaggcag gcgacgatgc agagcatccc cgcgaagacg
      721 atcacccacc cgtaatggac ggttggcctg cccggcggga atttttgcat gaggggaaat
      781 ataacatggt atttgtgcgg cgctcgaatt aagatgggag gcattccctg tagcgaggcc
      841 gatgccaggt ttcgtaaaac agtgtgtcga taatccgttg acgggcaaaa agcattatgg
      901 tacttttttg cacctttggc gattttcccg tgccgagcgg accgggtgaa gtgaagatcc
      961 caacgaacga aaggagaggg gaatgatggg aaggaaaggg atggtggtac tgggagttct
     1021 gatggcggtc tttctggcgg ggacgttcgc ccaggcggcg gaaccgctca agatcggagc
     1081 gatcttgtcg gtgaccggcc cggcgtcgtt cctcggagcg cccgaggcga gaaccctcga
     1141 gatgctcgtc gcggagacga acaaaaaggg cggcgtgatg ggaaggcaga tccagctgat
     1201 cgtcaaggat tccggcgcca gcccggagaa ggccttttcg ttcgccaagc agctgatcga
     1261 ggaggagaag gtgttcgcaa tcatcggccc ctcgacgagc ggcgagtcga tgaagatcaa
     1321 gagcctcgcg gaggagggga agacgatcct cctgtcctgc gccgcggccg aggagattgt
     1381 cgtcccggtt gccaagtacg tgttcaagac gccccagaag gaccgtgacg tggtcatcag
     1441 gatcttccag cagatgaaca agatgaagat ctccaagatc ggcgtcctct ccagcaacac
     1501 cggcttcggc aaggggggga aggggatgat cgagacgctg gcgccgcagc acggcatcac
     1561 gatcgtcgcc aacgaggtgt acgacaaggc cgcctcggac ctcacggcag aggtgaccaa
     1621 gctcaaggcg gcgaacgtcg aggcgatcgt gaactggtcc atcgagccgg cgcaggcgat
     1681 cgcgatcaag aacgcgcgcc agatcggcat caaggcgccc atctttctga gccacgggtt
     1741 tggaaacatc aaatacgtcg ggatcgccgg ggaggctgcc gaaggggtga tattccccgc
     1801 cggccggctc ctcgttgccg accagctccc ggataagcac ccccagaagg cgttgctcct
     1861 caagtacaag aaggattaca tgtcgttctg ctcgggggag gagtgcagca ccttcggcgg
     1921 ccacgcctac gacgcgtaca tcatcctgat gaaggggatc gaaaaggcga agtcgacgga
     1981 caaggaggcg gtccggaccg ccatcgagaa cctcaggggc gtcgtgggca ccgcgggaat
     2041 cttcaacttc tccccgccgg accacaacgg cctcggtctc gacgccgtcg agatgctgac
     2101 cgtcaagaac gggaagttcg ccatcctgaa gtaggaggca ccggaagcgc tgccattccg
     2161 atcgggagta cgcgcgtccg gcgcgtgctc ccgatcgttt gatgaaagga cacggacctg
     2221 gaattctttt ttcaatatct ggtcgcggga atcacgtacg ggacgatcta cgcgatcgtc
     2281 gccatcgggt tcaacatcat ctataacgcc accggcatta tcaacttcgc gcagggcgag
     2341 ttcgtcatgc tcggaggcat gaccgctgtc acgctgcacc agttcctgcc cctgccgctg
     2401 gctatcctgg ccgcggtcgt catcacgacg atcgtcggcg cgatcatcga gatcgtcttc
     2461 atccgctggc tccacaagcc ttcggtgctg cggatggtca tcatcaccat cggcatatcg
     2521 atcctgatcc gggagaccgc gttgcacatc tggggggaaa gcgtcaagac gctcccctat
     2581 ttcaccgggt cgtcgggatc ctccatcaac ctgggcgggg tattcgtttc gtcccagatc
     2641 ctttgggtcg tcggcatcgg cgccctcgtg gtcgcggccc tgggcgcctt cttcaacctg
     2701 acgatgctgg gccggcagat gcgcgcctgc tcggccaacc gcgacgccgc ccgcctctgc
     2761 ggcatcgacg cggggaacat ggtcaccctc tcgttcatgg tcagtgcagc gatcggcgcc
     2821 ctggggggct gcatcatctg cccgatcacc tacgtccagt acgacagcgg aacgccgctg
     2881 gccatcaagg ggttcaccgt cgccatcctc ggcgggctcg gaaacagcac ggcggccgtc
     2941 ggcgccggca tgatcctggg aatcctcgag tccttcagca tcatggtgct gcccaccgcg
     3001 tacaaggagg cgatctcgat cgccatcctg ctcgccatcc tgttcgtcaa gccgagcggc
     3061 atcttcggca gcgccgaggc cgcccggctc aaggagttct gatggggcgg agatacttcg
     3121 ccgtggccgc gttcgccggc ctgatcgtcg cgatccagat gtggacccat cttacgggta
     3181 ccggctatta cctcacccag ctgaccatga ccgcctacta ttcgctggtc atcatcggcc
     3241 tctgcatgct catcggatac gcggggcaga tctcgctcgg ccatgcgggg ttcttcgcca
     3301 tcggcgggta cgtgacggcg ttcctgacga cctgcaacct gcagccccac cggggggcct
     3361 tcgtctccct gctggagaaa tcaggggcgc tggtctcccg ccacgacgtt tacgggggcc
     3421 tcctcctgac ggttcacccg tggatggcct gcgcggccgc gatcctcctg acggtcgccg
     3481 tcgcctatct tgtcgggggg ccgatcctga agctgaaggg ccactacctg gccatggcga
     3541 ccctcgggat cggcatcatc gtctatcgca tcgctctggg gaccgaattt ctcggggcgg
     3601 cggacgggat ctccgaagtc cccgggttcc ccctgccggg ggggctggtc atcaccggcg
     3661 acgcctcctc gcgggtcttc aattattacc tggcgtgggg gctggtcatc
//
LOCUS       DATGYW010000722         1553 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_372311, whole genome shotgun sequence.
ACCESSION   DATGYW010000722 DATGYW010000000
VERSION     DATGYW010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1553
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372311"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..774
                     /locus_tag="VK429_10145"
     CDS             <1..774
                     /locus_tag="VK429_10145"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012645259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HLN92198.1"
                     /translation="TDTLRSKVARTTTRVDDLIEDPPDVMILAVKATALPLIASTLEG
                     FAAPGRYVVSWQNGIDTERVLANHLGAEFVLRAVVNLGCVPMGPAHVRIAFHHRPHYI
                     QELDPRSLAAAVGISGVFTACGLDTLHTDQIQHMVWRKAVLNACMNPICAVTGKTMAE
                     IINDPILFHLVDVLIKEGVSVARANEFRLGSNYYSYCIDYIRNAGHHKPSMLQDIEAG
                     RRTEVDYINGKIVEYGAQAGVPTPYNTMIRGLVKALEPK"
     gene            771..>1553
                     /locus_tag="VK429_10150"
     CDS             771..>1553
                     /locus_tag="VK429_10150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015436533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016625 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, iron-sulfur
                     protein as acceptor [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HLN92199.1"
                     /translation="MIREKVARLAARMHDGPQYPSQGAVLFVDLERREHFPKYLPLGV
                     LRSFLSGRGTNMFLLHNLLLDGREPLDPQIPMIFGSGVFTGTVPTAARGNLSSAAPDS
                     SGILDSNCGDFFPAFLKRNGYDHLVLYGRAAGWVLLELSGGEVRYHDATSYLGMDNAD
                     FTRAVERDFSCTERKEMAMARITRAGENLVLCSGIMGGPKAIYARCGTGAKMGSLRLK
                     AVMILGRGEPPDLSPACSENNRDLARKILSTSVVKYALKKVGT"
BASE COUNT          277 a          549 c          479 g          248 t
ORIGIN      
        1 accgacaccc tccggtcgaa ggtggccagg acgaccaccc gcgtcgacga cctgatcgaa
       61 gatccccccg acgtcatgat cttggcggtc aaggccaccg ccctcccgct gatcgcctcc
      121 acccttgagg ggttcgccgc cccgggccga tacgtcgtca gttggcagaa cgggatcgac
      181 accgagcgcg tactcgcgaa ccacctgggg gccgaattcg tcctgcgggc cgtcgtcaat
      241 ctcgggtgcg tcccgatggg accggcccac gtccggatcg ccttccatca tcgtccccac
      301 tacatccagg aactcgaccc ccggtcgttg gccgccgccg tcgggatctc cggggtcttc
      361 accgcgtgcg ggctcgacac cctgcacacg gaccagatcc agcacatggt ctggcgcaag
      421 gcggtcctga acgcctgcat gaatccgatc tgcgccgtga ccggtaagac gatggccgag
      481 atcatcaacg acccgatcct cttccacctg gtcgacgtcc tcatcaagga gggggtctcc
      541 gtcgccaggg cgaacgagtt ccggctcggc tcgaactact attcgtactg catcgactac
      601 atccggaacg ccgggcacca caagccgtcg atgctccagg acatcgaggc gggccggcgg
      661 accgaggtcg actacatcaa cggaaagatc gtcgagtacg gcgcccaggc cggcgtaccc
      721 accccgtaca acacgatgat ccgcggcctc gtcaaggcgc tcgagccgaa atgatccggg
      781 aaaaagttgc gcggctcgcg gcgcggatgc acgacggccc gcaatacccg tcgcagggcg
      841 cggtcctgtt cgtcgacctc gagcggcggg agcatttccc gaagtacctt cccctcgggg
      901 tgctgcggtc gttcctctcc ggccgcggga cgaacatgtt cctcctccat aatctcctgc
      961 ttgacggcag ggagcctctc gacccgcaga taccgatgat cttcggcagc ggcgtcttca
     1021 cggggacggt cccgaccgcc gcccgcggca acctgagctc cgccgctccg gacagcagcg
     1081 gtatcctcga cagcaactgc ggggatttct tccccgcgtt tctgaagcgg aacgggtacg
     1141 accacctcgt cctctacgga cgggccgccg gatgggtcct cctcgaactc tccggcgggg
     1201 aggtccgcta ccacgacgcc acttcctatc tcgggatgga caacgccgac ttcacacggg
     1261 ccgtcgaaag ggatttctcc tgcacggagc ggaaggagat ggcgatggcg cgcatcacgc
     1321 gcgccggcga gaacctcgtc ctgtgctccg ggatcatggg ggggccgaag gcgatctacg
     1381 ccaggtgcgg caccggcgcg aagatgggct ccctccggct gaaggccgtg atgatcctcg
     1441 gccgcggaga gccgcccgac ctgtccccgg cctgcagcga gaacaaccgg gatctcgcgc
     1501 ggaagatcct gtcgaccagc gtcgtcaagt acgccctgaa aaaggtgggc acc
//
LOCUS       DATGYW010000723         2711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_372492, whole genome shotgun sequence.
ACCESSION   DATGYW010000723 DATGYW010000000
VERSION     DATGYW010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372492"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..453
                     /locus_tag="VK429_10155"
     CDS             <1..453
                     /locus_tag="VK429_10155"
                     /inference="COORDINATES: protein motif:HMM:NF014815.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HLN92200.1"
                     /translation="VPAGEQDMAWRIGDQGFDIALSSYVPKLIGSNIRELVGPALTAG
                     GLRLSDIDTWAVHPGGKSIIDQVQRTLGLSADQVSASREVLRKCGNMSSATILFVLDE
                     ILKRPSEKMRERVCAVAFGPGLTVEMATLSTVHAGSPTGAGVPGIPNS"
     gene            627..>2711
                     /locus_tag="VK429_10160"
     CDS             627..>2711
                     /locus_tag="VK429_10160"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HLN92201.1"
                     /translation="MVSRNEVQSRNYAAFRNAFGSDEEILLSVTHPRLLGPEGLRFLD
                     ELTKEIGGFAGVRRVYSLTNARYAVPSTVGAENEPLVPRPFNVPGVSQRVLSALDDNP
                     TLASLLISRDRRTAGITIEIDDRPGDDTSRSGVIDALRGLMALRAGEAELHLSGIAVQ
                     KHDVAEFVQRDKTFLVPLSMLVLATMLAITFRRISGVVIPMAVKVVSVAWTMGAYAMA
                     GFRLNPITALLPPLIIVLSISTSVHLYDGWLQIPEGSGDRVPRIIQETHRLFLPSLFT
                     AIATAFGLLSLAVSDIPAVRQFGIFGALGAVVSFALSTTLVPVALSFFSPPHPEKISS
                     AMVALRRFLSGAAHLSTDWSRTVLAVALVLSLAGIAGLTRIRNNTDLVRFLKPGAQLY
                     RDTLFIDRNLAGVYALEFMVSRKDGRPMTDPEDMRALAAFQGVVAGEGPVADTYSIAD
                     VVRMINKAESGVQGARLPENRDALLYIFDLLSADKEQTFLEKLMSRDLSVARVSVRLH
                     AIGTAEAAPLARRLLDRGVGTLGGRYTLTPTGGFYQVTQDSNRMVRRQIQMFTLALAA
                     ILLSVHVLFRSLRYTVIALIPALVPMLLTGGVMGYSGIDLNVGTAMIAPVVLGLVVDN
                     TIHYLARYRAEYRGDAPGAVMRTTTGAGRALLASSLILAFGFGVGGFGSFKPTVHFSL
                     LAAGTMVAAAACV"
BASE COUNT          464 a          849 c          849 g          549 t
ORIGIN      
        1 gttcccgccg gcgagcagga catggcgtgg cggatcggcg accaggggtt cgacatcgcc
       61 ctgtcgagct acgtgcccaa gctcatcggc tcgaacatcc gcgaattggt cgggcccgca
      121 ctcaccgctg gggggctgcg cctgtccgac atcgatacgt gggcggttca ccccggggga
      181 aagtccatca tcgaccaggt gcagaggacc ctcggacttt ccgccgacca ggtgagcgct
      241 tcccgcgagg tgctgcgcaa atgcgggaac atgagcagcg ccaccatcct cttcgtcctc
      301 gatgagatcc tcaaacgccc ctccgagaaa atgcgggagc gcgtctgcgc ggtcgccttc
      361 ggacccgggc tgaccgtgga aatggcgacc ttgtcgaccg tccacgcggg ttctcccaca
      421 ggggccggcg tccccgggat tcctaactcc tgatccccgg agtataagcg atgagaatcg
      481 cacagggaga accctcaggc atcgagatgt tcctgaactg gcttcttgga aaagggcggt
      541 atccgtatct gggtttgctc ctcttgacga ccgcggtgtt ctccttcttc gctctccggg
      601 tcggtggggg agcggaaacc gaatcgatgg tgtcccgaaa cgaggttcaa agccgcaact
      661 acgccgcgtt ccgaaacgcg ttcggaagcg acgaggagat actgctgagc gttacccatc
      721 cgcggctcct tggaccggag ggactccggt ttctcgatga attgaccaaa gagattggag
      781 gcttcgcggg cgttcggcga gtctatagcc ttacaaatgc ccgctatgca gtgcccagca
      841 cggtgggggc cgagaacgag cccttggtcc cgcgaccctt caatgtcccc ggggtatccc
      901 agcgggtcct ctctgcactg gatgacaatc cgacactggc cagtctgctc atctcccggg
      961 accgacgcac ggcagggatc acgattgaga tcgatgatcg gcccggagac gatacgtcta
     1021 ggagcggagt tatcgatgcg ctcagggggt tgatggcact ccgggcggga gaggccgagc
     1081 tccacctctc cgggatcgcc gtacagaagc acgatgtggc ggagttcgtc cagagggaca
     1141 agacgttcct ggtaccgcta tcgatgctgg tgcttgccac gatgctggcg atcacgttca
     1201 ggcgtatctc gggagtggtg atcccgatgg cggtcaaggt cgtcagcgtg gcctggacga
     1261 tgggagcata cgccatggcc gggttccggc tgaacccgat cacggcgctt cttccaccgc
     1321 tgatcatcgt tctgtccatc tccacgagcg ttcacctgta cgacggatgg ctgcagatcc
     1381 cggaaggttc cggcgaccgc gttcctcgca tcatccagga aacacacagg ctcttcctcc
     1441 catccctatt tactgcgatt gccacggcgt tcggactcct gtcactcgcc gtcagcgaca
     1501 tccccgcggt ccggcagttc gggattttcg gggccctcgg ggcggtcgta tcctttgcct
     1561 tgagcactac gctcgttccc gtggcgttgt ccttcttctc tcctccccac ccggagaaga
     1621 tttcttccgc tatggtggcg ctgcgcaggt tcctatccgg ggcggcgcac ctctccacag
     1681 attggtcccg gacggttctg gcggtcgctc tcgtactctc cctggccggc atcgcggggc
     1741 tgacacggat ccggaacaat accgacctgg tccgtttcct gaagccgggt gcccagcttt
     1801 acagggatac ccttttcatc gatcggaacc tggcaggggt gtacgccctg gaattcatgg
     1861 tctcccggaa agacgggcga ccgatgacag atccggagga catgcgggct ttagccgcat
     1921 tccaaggcgt tgtcgcgggg gaaggacccg tggcggatac ttacagcatc gcggacgtcg
     1981 tccgcatgat caacaaggcg gaatcaggag tacagggggc tcgactgccg gagaataggg
     2041 atgcgctcct ctatatcttc gacctccttt ccgcggacaa agaacagacc tttctagaga
     2101 agcttatgag cagggacctg tccgtcgccc gcgtcagcgt gcgcctccac gcgatcggga
     2161 cggccgaggc cgcgccactt gcccggcgcc tcctggaccg aggggtgggg accctcgggg
     2221 gccggtatac cttgacgccg accggcggct tctaccaggt cacgcaggac tccaaccgga
     2281 tggttcggcg acagatccag atgttcaccc tcgcgttggc cgcaatcctg ttgtccgtcc
     2341 acgtgctgtt ccgttccttg cgatacaccg ttatcgcact gattccagcg ctggtcccaa
     2401 tgttgctgac cgggggcgtc atggggtatt ccggaatcga cctgaacgtg ggaactgcca
     2461 tgatcgcccc cgtggtcttg ggtcttgtcg tggacaacac gatccattat ctggcccgat
     2521 atcgggcgga ataccgtggg gacgcgcccg gggctgttat gcgcacgacg accggtgccg
     2581 gcagggcgct gctcgcatcc tcgctcatct tggccttcgg tttcggggtc ggcggcttcg
     2641 ggagcttcaa gccgaccgtg cacttttctc ttctggcggc gggaaccatg gtggcagcgg
     2701 cggcctgcgt c
//
LOCUS       DATGYW010000724         1881 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_107002, whole genome shotgun sequence.
ACCESSION   DATGYW010000724 DATGYW010000000
VERSION     DATGYW010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107002"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1427
                     /gene="glyS"
                     /locus_tag="VK429_10165"
     CDS             <1..1427
                     /gene="glyS"
                     /locus_tag="VK429_10165"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00211.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HLN92202.1"
                     /translation="RIRAGIRDAEKRIGMKWVEDEPLVETVANLVEYPVVMVGRFEEK
                     YLLLPREVLVTSMRNNQKYFVFEDEKGGLFPGFAFVSNMIVPDPSIVAAGNERVLRAR
                     LSDAEFYYGDDLKKPLFDRTEALKKVLFQADMGTYWEKIERMADIAEFVASFGFPGKA
                     KDCRRAAFLSKADLTTGVIKEFPELQGVMGRHYASKTGESVEVAQSVFEHYLPKGQSD
                     DLPATDVGAATAIADKIDMVCGCFGVGLIPTGTADPYGLRRHTLGILSILQSRGLRIP
                     LAELVDRSLVTLAAKLTTPAAEVRKKVLEFMAARYLNLMVTQGAPSDLVEAVLAPGLT
                     DVVDLRAKLDALVAFRADAAFDPLAEVFKRAINITKAYDGPLAVSSTLFEHDEERALH
                     AAAADVSVRVVEAARDGRYGEAFREMAGLQPLVAAFFEKVLVMAKDETVRNNRLALLK
                     GLSAVFASVADFSKVASSGQPKQG"
     gene            1443..>1881
                     /locus_tag="VK429_10170"
     CDS             1443..>1881
                     /locus_tag="VK429_10170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013968761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HLN92203.1"
                     /translation="MAAKRVFFFGGGKAEGNGTMKDVLGGKGAGLAEMTNLGVPVPPG
                     FTISTAACNLYYRNRGKLPQDLKVEIAANLAKLERAIGKKLGDPKNPLLVSVRSGAKF
                     SMPGMMDTVLNLGLNDTTMRAVIAQSGNERFAYDAYRRFIQMFG"
BASE COUNT          342 a          564 c          657 g          318 t
ORIGIN      
        1 gaaggatccg cgcgggaatc cgggacgccg aaaagcggat cggcatgaaa tgggtagagg
       61 acgagccgct ggtcgagacc gtggcgaacc tcgtggagta ccccgtggtc atggtgggac
      121 ggttcgagga gaagtacctc ctgctgccga gggaggtcct cgtcacctcg atgcggaaca
      181 accagaaata tttcgtcttc gaggatgaaa agggggggct gttccccgga ttcgccttcg
      241 tttcgaacat gatcgtcccc gatccgtcga tcgtcgccgc gggaaacgag cgggtcctcc
      301 gggcccggct ctccgacgcc gagttctact acggggacga cctgaagaag cccctgttcg
      361 accggaccga ggcgttgaag aaggtccttt tccaggcgga catgggaacg tactgggaaa
      421 agatcgagcg gatggccgac atcgcggaat tcgtcgcctc gttcggtttc cccggcaagg
      481 cgaaggattg ccgccgcgcg gcgttcctca gcaaggccga cctgaccacg ggcgtgatca
      541 aggagttccc cgagctgcag ggggtgatgg ggcggcacta cgcatcgaag accggcgagt
      601 cggtcgaggt ggcgcagtcg gtgttcgagc actacctgcc gaagggacag tccgacgacc
      661 ttccggccac ggacgtgggg gccgcgacgg cgatcgccga caagatcgac atggtgtgcg
      721 gctgcttcgg cgtggggctc atcccgacgg gaaccgcgga tccatacggc ctgcggcgcc
      781 atacgctggg gatcctatcc atcctccaat cgcgggggct ccggatcccg ctcgcggaac
      841 tggtggaccg ctcccttgtg accctcgcgg cgaagctcac gacgccggcg gccgaggtgc
      901 ggaagaaggt cctcgagttc atggcggccc gctacctgaa cctcatggtt acccagggtg
      961 cgccgtccga cctcgtcgag gcggtgctgg caccggggct cacggacgtt gtggaccttc
     1021 gggcgaagct cgacgcgctg gtcgccttcc gggcggacgc ggcgttcgat cccctcgcgg
     1081 aggtcttcaa gcgcgcgatc aacatcacca aggcgtacga tggtcccctc gcggtctctt
     1141 cgacgctctt cgaacacgac gaggagcggg cgctccacgc cgccgcggcc gatgtctcgg
     1201 tccgcgtcgt ggaggcggcc cgggacgggc ggtacggcga ggcgttccgc gagatggcgg
     1261 ggctccagcc gctggtggcc gccttcttcg aaaaagtgct cgtgatggcg aaggacgaaa
     1321 cggtccggaa caaccggctt gcgctcctga aggggctgtc ggcggtgttc gcgtcggtgg
     1381 cggacttttc aaaggtggcg tcttcagggc agccgaaaca agggtgatcg gaggagcgac
     1441 gaatggcggc aaaacgggtc ttctttttcg gggggggtaa ggccgagggg aacggaacga
     1501 tgaaggacgt cctcggcggg aagggagcgg gcctcgcaga gatgacaaac ctcggcgtgc
     1561 cggttcctcc gggatttacc atcagcaccg cggcctgcaa cctgtattac aggaaccgag
     1621 ggaagctccc tcaggatctc aaggtagaga tcgcggcgaa ccttgcgaag ctcgagcggg
     1681 cgatcggcaa gaagctgggc gatccgaaaa acccgctgct cgtctccgtc cggtcggggg
     1741 cgaagttctc catgccgggc atgatggaca cggtcctcaa cctcgggttg aacgacacca
     1801 ccatgcgcgc cgtcattgcc cagagcggca atgagcgctt tgcctacgat gcttatcgcc
     1861 gcttcattca gatgttcggc c
//
LOCUS       DATGYW010000725         1785 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_372952, whole genome shotgun sequence.
ACCESSION   DATGYW010000725 DATGYW010000000
VERSION     DATGYW010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372952"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..889)
                     /locus_tag="VK429_10175"
     CDS             complement(<1..889)
                     /locus_tag="VK429_10175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006170240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2 family protein"
                     /protein_id="HLN92204.1"
                     /translation="MDKKKREMLKRIEKLVDPYRITRGKGFRLKDIDPGDTAGYGSDQ
                     KPRAKELLAEGVRWMAEEQDKFYADDRHSMLLVFQAMDAAGKDGTISHVMSGVNPQGC
                     QVYSFKQPSMEELDHDYMWRYQRCLPERGRIGIFNRSYYEEVLVVRVHGELLERQKMP
                     RDLVSRKIWEERLEDIAGFERYLARQGTVLLKFFLHVSRKEQKRRFLERLEMPEKNWK
                     FSSADVTERGYWRDYMAAYEDAIRSTASREAPWYVIPADNKWFTRLVVAAVIVEAFWK
                     LKLTYPPVDDAKKKDLAAAR"
     gene            complement(923..>1785)
                     /locus_tag="VK429_10180"
     CDS             complement(923..>1785)
                     /locus_tag="VK429_10180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004175475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HLN92205.1"
                     /translation="DSLLLTRAQTAGKPATLNRQGKVLRPATIPCTLPEVFNSVRPGE
                     RIWFDDGKIGGVIRTAGPDQIRVEITQARQKGERLLPEKGINLPDTRMRLSVLTEKDA
                     SDLRFVAANADLVGLSFIRNVSDVESLRARLAEFGGENLGVVLKIETRRAFEMLPDLL
                     LQAMRSPSFGVMIARGDLAVECGFERLAEVQEEILWLCEAAHAPVIWATQVLQTLAKS
                     GVLSRAEITDAAVGERAECVMLNKGPHIVEALRVLDNILQRMQAHQSKKRSMLRRLRW
                     WSKAKTTVKE"
BASE COUNT          267 a          638 c          539 g          341 t
ORIGIN      
        1 tgcgtgccgc cgcgaggtcc tttttcttcg cgtcgtcgac cggagggtag gtgagtttca
       61 gcttccagaa cgcctcgacg atcaccgcgg cgaccacaag ccgggtgaac cacttgttgt
      121 cggccgggat cacgtaccac ggcgcctccc tggaggccgt ggagcggatg gcatcctcgt
      181 aggccgccat gtaatcccgc cagtaaccgc gctccgtgac gtcggccgag gaaaatttcc
      241 agttcttctc cggcatttcc aggcgctcca ggaaccgccg cttctgctcc ttgcgggaga
      301 cgtgcaggaa gaacttcagc aagacggtgc cctgtcgcgc cagatagcgc tcgaaccccg
      361 cgatgtcctc caggcgctcc tcccagatct tccggctcac caggtcccgc ggcatcttct
      421 ggcgctcgag cagctccccg tgcacccgga ccacgagcac ctcctcgtag tacgaccggt
      481 tgaagatccc gatgcggccc cgctccggga ggcacctctg gtagcgccac atgtagtcgt
      541 ggtcgagctc ttccatggac ggctgcttga acgagtagac ctggcacccc tgcgggttca
      601 cgcccgacat gacgtggctt atagtgccgt cctttcctgc cgcgtccatc gcctggaaca
      661 ccaggagcat cgagtggcgg tcgtcggcgt agaacttgtc ctgctcctcc gccatccacc
      721 ggaccccttc ggccagcaac tccttcgccc tcggtttctg atcggacccg tacccggccg
      781 tgtcgcccgg gtcgatgtcc ttgaggcgga accccttccc ccgggttatg cgataggggt
      841 cgacgagctt ttcgatcctt ttgagcatct cccgcttttt cttgtccatc tccgcctcct
      901 tcgaatatgg ccggcccctt cctcattcct tgaccgtggt cttcgccttg ctccaccagc
      961 ggaggcgccg tagcatcgaa cgcttcttgc tctggtgggc ctgcatccgc tggaggatgt
     1021 tgtccaggac ccgcaaggcc tcaacgatgt gggggccctt gttcagcatc acgcactccg
     1081 cccgctcccc cacggcggcg tccgtgatct ccgcccggga cagcaccccg ctcttggcga
     1141 gggtctgcag gacctgggtg gcccagatca cgggggcgtg cgccgcctcg cacagccaga
     1201 ggatctcctc ctgcacctcc gccagacgct cgaacccgca ctccacggcg aggtctcccc
     1261 gcgcgatcat cacaccgaag gagggggaac gcatcgcctg gaggagcagg tcgggcagca
     1321 tctcgaaggc cctgcgcgtc tcgatcttga ggacaacgcc caggttctcc cccccgaact
     1381 ccgcgagcct cgcccgcagc gactcgacgt cggagacgtt ccggatgaac gacaggccga
     1441 ccaggtccgc gttggcggcc acgaagcgga ggtcgctcgc gtccttctcc gtgagcaccg
     1501 agaggcgcat ccgggtgtcg gggaggttga tccccttttc ggggagcaga cgctccccct
     1561 tctgccgcgc ctgcgtgatc tccacccgga tctggtccgg cccggcggtg cggatgaccc
     1621 cgccgatctt tccgtcgtcg aaccagatcc tctcccccgg gcgtacggag ttgaacacct
     1681 ccgggagggt gcaggggatc gtcgcgggcc ggaggacctt cccctgacgg ttcagggtgg
     1741 ccggcttccc ggcggtctgt gcccgcgtga ggagaaggga atccc
//
LOCUS       DATGYW010000726         3315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_374383, whole genome shotgun sequence.
ACCESSION   DATGYW010000726 DATGYW010000000
VERSION     DATGYW010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 3315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3315
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374383"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1245)
                     /locus_tag="VK429_10185"
     CDS             complement(<1..1245)
                     /locus_tag="VK429_10185"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HLN92206.1"
                     /translation="MRDMPVAHEGGNCTRVHGKSFPDGDEMLSATNSWKARIGIPMVY
                     IKSRLENRIDSEHEQAIIRLAITIFVFFYLLGSYLHNRPEHPHIGWALYFVGFYIIFS
                     LSVLAFIVARPAKSHLRRTIGMIGDIGGVTYCLYVGGGNTAPMYIILLWVTLGNGFRY
                     GQKYLTASALASSVGFSAVVYTQSYWRYQIPLSVGLIGGLIVLPLYALSLIRKLTDAM
                     QKLSEATTRSEDANKAKSQFLANMSHELRTPLNGIMGMAELLLGTRLEKEQKDFANTI
                     YESTRTMISLVNDVLDISRIEAGKIVIEKVDFDLHELLKNTSTMLVPQAIKKGIRLST
                     IIPPSVPFLLRGDSVHLRQVVMNLLSNGVKFTENGEVKLRVQRVSESADSVLLKIEVT
                     DTGIGMTEEQRKKIFGRFTQADE"
     gene            complement(1482..>3315)
                     /locus_tag="VK429_10190"
     CDS             complement(1482..>3315)
                     /locus_tag="VK429_10190"
                     /inference="COORDINATES: protein motif:HMM:NF019344.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HLN92207.1"
                     /translation="APEPVSSETPLLDRFGRDITRAAREGRLLPFVDSDRTRKTLRQV
                     IKVLMMPTKNNPVLVGEAGVGKTAVVEALAERIALGRDRRFLPGRRLVELSMADMVAG
                     TKYRGEFEERLTRVIEEVRSHPEVILFIDEFHTVAGAGRAEGAPMDAGNIMKPALARG
                     ELRCIGATTITEYRRSVEKDPALERRFQPVQVAEPGRDETLEILQGVRAHRESHFGVT
                     ITDETLSATVDLAVRFDPTHFLPDKAIDLLDRACAECRVPLLSMAANSDRYDAVGVAV
                     VTPEYVARVVAEKMGIPIEVARGGLGGITESRVRGLEEYLNRYVVGQEEAISRVCRRL
                     VLSHAGLGDRRRPMGVFLFLGPSGVGKTEVARRIASYLFANERAFIHLDMSEYQEEVS
                     VSRLIGAAPGYVGYEEGGQLIARLRTTPYSVVLLDEVEKASPRVFDLFLQLFDEAKIT
                     DAQGHTADARHTIFIMTGNVPVRKEMGFRAGEAAVAEGAALAEVRRRFRPEFLNRVDE
                     KIVFRALAPDDVRKVLALRIAELSESLLADHGVALEMDPDAADWLAAEGYQPEYGVRE
                     LARAVDRWIRAPIGAMSAAGELARRAASGTPLKVRKTTEGLRVE"
BASE COUNT          623 a         1063 c          992 g          637 t
ORIGIN      
        1 ttcgtcggcc tgggtaaacc gaccgaagat cttttttctc tgttcctccg tcatcccgat
       61 gccggtatcc gttacctcga ttttcaataa aacggagtcc gcgctctcgg acacgcgttg
      121 gacacgcagc tttacttcgc cgttttccgt aaatttgacg ccatttgaaa ggaggttcat
      181 gacgacctgc cggaggtgga cggagtcacc tctgaggagg aacgggacgc tgggggggat
      241 gatggtggag agacgaatcc cttttttaat ggcctgcgga acgagcatcg tcgatgtgtt
      301 tttcaataat tcatggagat caaagtcaac tttttcgata acgatcttac cggcctcaat
      361 tcttgagatg tccagcacat cgtttacgag ggatatcatc gtccgtgtgg attcgtagat
      421 ggtattcgca aaatcctttt gctctttttc aaggcgggtg ccaaggagta gttccgccat
      481 tcccatgatg ccgttcagcg gggttcgcaa ctcgtgggac atattcgcca gaaactggct
      541 cttggcttta ttcgcatcct cggaacgagt cgtcgcctcg gagagctttt gcatggcatc
      601 cgtaagtttt ctgattaggg atagcgcgta cagcgggaga acgatcaagc ccccgatcag
      661 cccgacggaa agcgggatct ggtatctcca gtaactctgg gtataaacca cggcggaaaa
      721 acccactgag gatgccagag cactggcagt gagatacttc tgtccgtacc ggaacccgtt
      781 cccaagagtt acccagagca aaataatata catgggggcc gtgttcccgc cgccaacata
      841 aaggcaatag gtgactcctc cgatgtcgcc aatcatgccg atcgttcttc gaaggtggga
      901 cttagcgggc cgcgcaacga tgaatgccag cacactgaga gaaaaaatga tgtaaaaccc
      961 gacaaaatag agggcccatc cgatatgcgg atgttccgga cgattgtgaa gatacgatcc
     1021 tagaaggtag aaaaaaacga agattgtaat ggccaggcgt atgattgcct gctcgtgctc
     1081 cgaatcgatc ctgttctcta aacgggattt tatatacacc attggaatcc caatgcgtgc
     1141 cttccatgaa tttgtcgcag atagcatctc gtccccatcc ggaaaggatt tgccatgcac
     1201 acgggtgcaa ttcccacctt catgtgcaac aggcatgtcc ctcatgctct tctgctcttc
     1261 ggcataataa gcaggaatat tcaggggaaa ttcttaaagt cgtctgaatt cggaacatac
     1321 cggatcgtaa cggataattt cgctgggtcg ccatcggcgt gaccgtctca cgaatcctca
     1381 tgacccgctt gggaaggttg accgggaggt cctcagtggc ggaagagatg gcggcggaag
     1441 cggtcggtcg ggaacgttgc gccgggagcg aacggaaccg tttattcgac ccggaggcct
     1501 tccgtcgtct ttcggacctt caagggcgtg cccgaggcgg ccctgcgcgc gagctccccc
     1561 gcggcgctca tcgccccgat cggcgcccgg atccagcggt ccacggcccg ggcgagctcc
     1621 cggaccccgt actccggctg gtatccttcc gcggccagcc aatccgccgc gtccgggtcc
     1681 atttcgagcg ccaccccgtg gtcggcgaga aggctctccg acagctccgc gatccggagc
     1741 gccagcacct tccgtacgtc gtcgggagca agcgcccgga agacgatctt ctcgtccacg
     1801 cggttgagga actccggccg gaaccggcgc cggacctccg ccagcgcagc cccttccgcc
     1861 accgccgcct cgcccgcgcg gaaccccatc tccttccgga cggggacgtt cccggtcatg
     1921 atgaagatcg tgtggcgcgc gtccgcggtg tgtccctggg cgtcggtgat cttcgcctcg
     1981 tcgaacagct gcaggaacag gtcgaacacc cggggggacg ccttttcgac ctcgtcgagc
     2041 aggaccaccg aatacggggt ggtccgcaac cgggcgatga gctgccctcc ctcctcgtat
     2101 ccgacgtacc ccggcgcggc gccgatgagg cgggagacgc tgacctcctc ctggtactcc
     2161 gacatgtcca ggtggatgaa cgcgcgttcg ttggcgaaga ggtacgaggc gatccgccgc
     2221 gccacctcgg tcttccccac cccggaggga ccgaggaaca ggaagacgcc catcggccgg
     2281 cggcggtcgc ccagcccggc gtgggaaagg acgaggcggc ggcacacccg ggaaatcgcc
     2341 tcctcctgtc cgacgacgta ccggttgaga tactcctcga gcccccgcac ccgggattcg
     2401 gtgatccccc ccagcccgcc ccgggccacc tcgatcggga tccccatctt ctcggccacg
     2461 acgcgggcca cgtactcggg cgttacaacg gcgaccccca cggcgtcgta ccggtcggag
     2521 ttcgccgcca tggagaggag cggcacgcgg cactccgcgc aagcccggtc caggagatcg
     2581 atcgccttgt ccgggaggaa gtgcgtcggg tcgaatcgca cggcgagatc gacagtggcg
     2641 gacagcgtct cgtccgtgat cgtcacgccg aagtggctct cccgatgcgc ccggaccccc
     2701 tgcaggatct ccagcgtctc gtcccgcccg ggctcggcga cctggaccgg ctggaaccgg
     2761 cgctccaggg ccgggtcctt ctcgacgctt cgccggtact ccgtgatcgt cgtggcgccg
     2821 atgcaccgca gctccccgcg ggccagcgcc ggcttcatga tgttccccgc gtccatcggg
     2881 gccccttcgg cgcgccccgc cccggccacc gtgtggaact cgtcgatgaa caggatcact
     2941 tccgggtggg accggacctc ctcgatcacg cgggtcaggc gctcctcgaa ctctccccgg
     3001 tactttgtgc ccgccaccat atccgccatc gacagttcga ccagcctgcg gcccgggagg
     3061 aaccggcggt cccgcccgag ggcgatccgc tccgccagcg cctcgacgac ggcggtcttc
     3121 ccgactcccg cctcccccac gaggacggga ttgttctttg tcggcatcat caggaccttg
     3181 atgacctggc gaagggtctt ccgggtccgg tcggaatcga cgaacggaag gaggcgcccc
     3241 tcccgtgcgg cccgtgtgat gtcgcggccg aaccggtcga ggagcggcgt ctcggaggag
     3301 accggttccg gcgca
//
LOCUS       DATGYW010000727         2803 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_374543, whole genome shotgun sequence.
ACCESSION   DATGYW010000727 DATGYW010000000
VERSION     DATGYW010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2803
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374543"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1108
                     /locus_tag="VK429_10195"
     CDS             <1..1108
                     /locus_tag="VK429_10195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013010510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HLN92208.1"
                     /translation="IDPVLEMHRGGKISVKSRIDIDSISTIRKVYTPGVAKVCQLIQR
                     KPELAYKYTVIPNTVAIVTNGTAILGLGDIGAVAGMPVMEGKAALFDALVGINGVPIL
                     IQSKDTEEIIRTVASIAPTFGAIKLEDIKAPECFEIEDRLGEMLDIPVMHDDQHGTAV
                     VVLAALLNASKYVGMQVKNDTVGMVGLGAAGIGISKLLMAFGVRKMLGADINPGALEI
                     FAKEGGKPVTLPEIMASADIVICTTGVPGLIKKEMIRKGQVILALSNPRPEISPEEAR
                     SAGASFAADGRGVNNALAFPGVFRGALNARAHKINNRMKIAAAKVISSCASAGELVPS
                     ILDREMHAKVAEAVERAAFETGVARPRTEEIEET"
     gene            1118..1738
                     /gene="plsY"
                     /locus_tag="VK429_10200"
     CDS             1118..1738
                     /gene="plsY"
                     /locus_tag="VK429_10200"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012774283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HLN92209.1"
                     /translation="MDASWLRGTLLVLFGYLLGSVPFGILVAKAFDRDLDLRKAGSGN
                     IGATNVARTLGRGAGILTLALDAGKGILALALSRQLLDPSAAHWLALVGGAVFLGHIF
                     PVYLRFRGGKGVAVALGVVLFLSPETAFVIVVLFAAVLYFTRYVSLASLCAAVGLPVA
                     MAFLGKSRHYVTLALMMSFLVIYTHRENIHRLLSGQESRFGPKPGK"
     gene            1944..2282
                     /locus_tag="VK429_10205"
     CDS             1944..2282
                     /locus_tag="VK429_10205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014551665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HLN92210.1"
                     /translation="MKKVEAIIKPFKLDEVKESLNDIGVQGMTVSEVKGFGRQKGHTE
                     LYRGAEYVVDFLPKIKLEIIVPDDLVAQVVELVEKSARTGRIGDGKIFVTNVEEVIRI
                     RTGERGLDAI"
     gene            2336..>2803
                     /locus_tag="VK429_10210"
     CDS             2336..>2803
                     /locus_tag="VK429_10210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013908780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase beta-grasp
                     domain-containing protein"
                     /protein_id="HLN92211.1"
                     /translation="MNAKEVLGFAKSKNIEMVDLKFMDFIGTWQHFAVPVYELKEDSF
                     EEGFGFDGSSIRGWQPIHASDMLVIPDPETAVVDPFITRTTLSLICNIVDPITKENYS
                     RDPRNIARKAEAYLKSTGIADTAFFGPEAEFFIFDDIRYGGGSNFGFYYIDSDE"
BASE COUNT          493 a          939 c          897 g          474 t
ORIGIN      
        1 catcgacccg gtgctcgaga tgcaccgggg cgggaagatc tccgtcaagt cccgcatcga
       61 catcgacagc atctccacga tccggaaggt ctacaccccc ggcgtcgcca aggtctgcca
      121 gctcatccag cggaagccgg agctggcgta caaatacacg gtcatcccga acacggtcgc
      181 gatcgtcacg aacggcaccg ccatcctcgg cctgggggac atcggggccg tcgccggcat
      241 gccggtgatg gaggggaagg cggccctctt cgacgcgctg gtggggatca acggcgtccc
      301 catcctcatc cagtcgaagg acaccgagga gatcatccgc acggtcgcct ccatcgcccc
      361 gacgttcggc gcgatcaagc tcgaggacat aaaggccccc gagtgcttcg agatcgagga
      421 tcgcctgggc gagatgctcg atatcccggt gatgcacgac gaccagcacg gcacggccgt
      481 cgtcgtcctg gccgcgctgc tgaacgcgag caagtacgtc gggatgcagg tgaagaacga
      541 cacggtcggc atggtggggc tgggggccgc cgggatcggg atctcgaagc tcctgatggc
      601 cttcggggtc cgcaagatgc tcggcgccga catcaatccc ggcgcgctgg agatcttcgc
      661 gaaggagggc ggcaagcccg tcacgcttcc ggagatcatg gcgtcggccg acatcgtcat
      721 ctgcacgacc ggggtgccgg ggctcatcaa gaaggagatg atccgcaagg ggcaggtgat
      781 cctcgcgctg tcgaacccga ggcccgagat ctcccccgag gaggcccggt cggcgggagc
      841 ctcgttcgcg gcggacggca ggggggtcaa caacgcgctg gcgttccccg gcgtgttccg
      901 gggcgcgctg aacgcgcggg cccacaagat caacaaccgg atgaagatcg ccgccgccaa
      961 ggtcatcagc tcgtgcgcgt ccgccgggga gctcgtcccc tcgatcctcg accgcgagat
     1021 gcacgcgaaa gtcgcggagg ccgtcgagcg cgccgccttc gaaaccggcg tcgcacgtcc
     1081 ccgcacggaa gagatcgaag aaacgtaacc ccgcgccatg gacgcttcgt ggctccgcgg
     1141 caccctcctc gtcctcttcg gctacctgct cggctccgtc ccgttcggca tcctcgtcgc
     1201 gaaggcgttc gaccgcgacc tggatctgcg gaaggccggt tcggggaaca tcggcgcgac
     1261 gaacgtcgcg cgcacgctcg ggaggggcgc cgggatcctc accctcgcgc tcgacgccgg
     1321 gaaagggatc ctcgccctcg cgctctcccg gcagctcctg gacccgtccg cggcccactg
     1381 gcttgccctg gtcggcgggg cggtgtttct ggggcacatc ttcccggtct atctccgctt
     1441 ccgggggggg aagggcgtcg cggtcgccct gggcgtcgtg ctgttcctct cgccggagac
     1501 cgccttcgtc atcgtggtcc tcttcgccgc cgtgctgtac ttcacgcggt acgtatcgct
     1561 cgcgtcgctc tgcgccgccg tcggccttcc cgtcgccatg gcgttcctcg ggaagtcgcg
     1621 gcattacgtc accctggccc tcatgatgtc gttcctcgtg atctacaccc atcgggaaaa
     1681 catccaccgt ctcctctccg gccaggagag caggttcggc ccgaagcccg ggaagtgacc
     1741 gtgcacaggc cgcgggcacc gggtgcccac ggattgtgca gactcccgcc cgggcgtccg
     1801 tcgcctcccg cccctccctc ttcgcctcgt ctccatggat gattgaattt ccaggagaaa
     1861 tccattttcg ccgccgccgg gacggttcgg atccggggtt ggtacgaccg ttgctttgat
     1921 ggaggacaaa agggggtgaa cccatgaaaa aggtcgaggc gatcatcaag ccgttcaagt
     1981 tggacgaggt gaaggagtcg ctgaacgaca tcggtgtcca gggcatgacg gtttccgagg
     2041 tcaaggggtt cggccgccag aaggggcaca ccgaactgta ccggggggcg gaatacgtcg
     2101 tcgatttcct tcccaagatc aagctcgaga tcatcgttcc cgacgacctg gtcgcccagg
     2161 tggtcgagct cgtcgagaag tcggcccgga cgggccggat cggcgacggg aagatcttcg
     2221 tcaccaacgt cgaggaagtc atccggatcc gcaccggcga acgcggtctc gacgccatct
     2281 gaccggatcg cctgccgcgt cctcattcca acattccgcc ccaggaggga ccgcaatgaa
     2341 cgcgaaggaa gtcctcggtt tcgcaaagag caagaacatc gagatggtcg acctgaagtt
     2401 catggatttc atcggcacct ggcagcactt cgcggtaccc gtctatgagc tcaaggagga
     2461 cagcttcgag gaagggttcg gcttcgacgg atcgtccatc cgcggctggc agccgatcca
     2521 cgcctccgac atgctggtga tccccgaccc cgagacggcg gtcgtcgatc cgttcatcac
     2581 ccggacgacg ctttcgctga tctgcaacat cgtcgacccg atcaccaagg agaattactc
     2641 ccgcgacccc cgcaacatcg cgcggaaggc cgaggcgtac ctgaagtcga ccggcatcgc
     2701 cgacacggcg ttcttcggac cggaggccga gttcttcatc ttcgacgaca tccgctacgg
     2761 cggcggatcg aacttcggct tctactatat cgactccgac gag
//
LOCUS       DATGYW010000728         1755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_374618, whole genome shotgun sequence.
ACCESSION   DATGYW010000728 DATGYW010000000
VERSION     DATGYW010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 1755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1755
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374618"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(180..>1755)
                     /locus_tag="VK429_10215"
     CDS             complement(180..>1755)
                     /locus_tag="VK429_10215"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012530034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HLN92212.1"
                     /translation="SSLGKGLAAASIGALMEARGLKITMLKLDPYINVDPGTMSPYQH
                     GEVFVTDDGAETDLDLGHYERFVSSPTGKKNNCTTGRIYHSVITKERRGDYLGGTVQV
                     IPHITDEIKRVIYAAAKGYDLAIVEVGGTVGDIESLPFLEAIRQVKSDRGKENVLYVH
                     LTLVPYIKTAGELKTKPTQHSVKELRSIGIQPDVLLCRTDRPLPKEIKGKIALFCNVT
                     EDAVITASDVDLIYELPLVFHQEGLDDKLMELLNIWAGEPRLEDWARVVDRWKNPTGE
                     VTIAIVGKYVNLKESYKSLNEALTHGGIAHQVRVHNRYVDSEEVERQGAEAMLKGVDG
                     ILVPGGFGSRGVEGKIAAARYARENRIPYFGICLGMQVAVVEFARNACGLASATSREL
                     DSESTCPVIDLMPEQRTVEEKGATMRLGAYPCKVVEKSLARKAYGAGPVSERHRHRYE
                     FNNDYRQALSEKGLRITGVSPDDRLVEIVEIPDHPWFLGCQFHPEFRSRPLVPHPLFR
                     DFIGAAAARARQGIAP"
BASE COUNT          260 a          596 c          586 g          313 t
ORIGIN      
        1 gaacaccacg ttcacaggga gccgtgcggc cagatccgcg aggaaggcgg cgacggagag
       61 ggcgagctcc tcggattcga ggacgcacgg ccccgcgatc agcaggaggg ggcacccggg
      121 gccgaccccg taccggttcg cgatggagac ccgacggatc atgcgtcccc cttcaccggc
      181 tagggagcga tcccctggcg ggcccgggcc gccgccgcgc cgatgaagtc gcggaacagc
      241 gggtgcggaa ccaggggacg cgaacggaac tcgggatgga actggcaccc gaggaaccag
      301 gggtgatcgg gaatctccac gatctcgacg agccggtcgt cgggcgacac accggtgatc
      361 cgaaggcctt tttcggagag cgcctggcgg tagtcgttgt tgaattcata ccggtgccgg
      421 tgccgctcgg agaccggacc cgccccgtac gccttccgcg cgagcgactt ctcgacgacc
      481 ttgcaggggt aggcgccgag gcgcatcgtc gcccccttct cctccacggt gcgctgctcg
      541 ggcatcaggt cgatcaccgg gcacgtgctc tcgctgtcga gctccctgct cgtggccgac
      601 gcgaggccgc acgcgttccg ggcgaactcc acgaccgcca cctgcatccc gaggcagatc
      661 ccgaagtacg ggatcctgtt ttcccgggcg taccgggcgg cggcgatctt cccctccacg
      721 ccgcgggaac cgaacccccc ggggacgagg attccgtcga cgcccttgag catcgcctcc
      781 gcgccctgcc gctccacctc ctcggaatcg acgtaccggt tgtggacccg cacctggtgc
      841 gcgatcccgc cgtgggtgag cgcctcgttc aggctcttgt acgactcctt caggttgacg
      901 tatttcccga cgatggcgat ggtgacctcc cccgtcgggt tcttccaccg gtccacgacg
      961 cgcgcccaat cttcgaggcg cggctcgccg gcccagatgt tcagaagctc catcagcttg
     1021 tcgtcgagcc cctcctggtg gaagaccagc ggcagctcgt agatcaggtc gacgtcgctc
     1081 gccgtgatca ccgcgtcctc ggtgacgttg cagaacaggg cgatcttccc cttgatctcc
     1141 ttcgggagcg gccgatcggt ccggcagagc aggacgtcgg gctggatgcc gatggagcgc
     1201 agctccttca cgctgtgctg ggtgggcttg gtcttcagct ccccggccgt cttgatgtag
     1261 gggacgagcg tcaggtggac gtagaggacg ttctccttcc cccgatcgct cttcacctgc
     1321 cggatcgcct cgaggaacgg gaggctctcg atgtcgccca ccgtgccgcc cacctcgacg
     1381 atcgcgaggt cgtatccctt ggccgccgcg tagatgaccc gcttgatctc gtcggtgatg
     1441 tgggggatca cctgcaccgt gccgccgagg tagtcgccgc ggcgctcctt ggtgatcacg
     1501 gagtggtaga tcctgccggt ggtgcagttg ttcttcttgc ccgtggggga ggatacgaac
     1561 cgctcgtagt gcccgagatc gaggtcggtc tcggcgccgt cgtcggtgac gaagacctcg
     1621 ccgtgctggt aggggctcat ggtgcccggg tcgacgttga tgtacgggtc gagcttcagc
     1681 atcgtgatct tgaggcccct ggcttccatc agggccccga tcgatgccgc cgcgagcccc
     1741 ttccccagcg acgag
//
LOCUS       DATGYW010000729         2043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Patescibacteria group bacterium isolate SMAG_U10646
            k141_374722, whole genome shotgun sequence.
ACCESSION   DATGYW010000729 DATGYW010000000
VERSION     DATGYW010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37957414
            Sequence Read Archive: SRR5823612
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Patescibacteria group bacterium (soil metagenome)
  ORGANISM  Patescibacteria group bacterium
            Bacteria.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/03/2024 23:04:03
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,045
            CDSs (total)                      :: 2,021
            Genes (coding)                    :: 1,995
            CDSs (with protein)               :: 1,995
            Genes (RNA)                       :: 24
            tRNAs                             :: 22
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 26
            CDSs (without protein)            :: 26
            Pseudo Genes (ambiguous residues) :: 0 of 26
            Pseudo Genes (frameshifted)       :: 0 of 26
            Pseudo Genes (incomplete)         :: 20 of 26
            Pseudo Genes (internal stop)      :: 6 of 26
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Patescibacteria group bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374722"
                     /isolate="SMAG_U10646"
                     /isolation_source="soil"
                     /db_xref="taxon:2052139"
                     /environmental_sample
                     /country="Italy"
                     /lat_lon="45.19 N 8.25 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1325
                     /gene="zwf"
                     /locus_tag="VK429_10220"
     CDS             <1..1325
                     /gene="zwf"
                     /locus_tag="VK429_10220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011984917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HLN92213.1"
                     /translation="RSGRLDVPVIGVARGGWNLERLRERAREGVERNGGFDRDAFEKF
                     SRLLRYVGGDYDDPATFVALRKELGGAKRPLFYLAIPPALFGTVIGRLHDALCDQGAR
                     VVVEKPFGRDLLSARELSRILHLCFDENRIFRIDHYLGKNAVQNLIYFRFANAFLEPI
                     WNRNYVRSVQITMAEQFGLEGRGAFYEQAGAIRDVVQNHMLQVLANVALEPPVGNEDV
                     EALRDEKVKVLKAIPPLVPADVIRGQFRGYREEPGVSPTSTVETYAAVRIEVRSWRWQ
                     GVPFFIRAGKLLPGNRVEVVVTLRRPPPIFTGPLPPTVAAIPGANYIRFRLGPDLTIA
                     LGAMVKHPGEEFVGDRVELLASHQPEADEPDAYEQLLGDALRGETFRFARADYVEEAW
                     RIVDPVLKAETPLFPYEPGTWGPGEAEALVAPERWQDPAPAAGPPESP"
     gene            1322..2011
                     /gene="pgl"
                     /locus_tag="VK429_10225"
     CDS             1322..2011
                     /gene="pgl"
                     /locus_tag="VK429_10225"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011420496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HLN92214.1"
                     /translation="MRTEILPDPGTVAIRAAERIAQIAREAVTERGRCVLAVSGGTTP
                     WLAFRALAGEDAPWERVHLFQVDERVAPYGEPERNYLHLKEALIDRIPIPPANVHPMP
                     VEEEDLDAAARRYETILRRVAGTPPVLDLVQLGLGEDGHTASLFAGDPAFQVIDADVA
                     VSGLYKGRRRMTLTFPAIDRARCILWLVTGSGKSAALERLCAGDRSIPAGRVRSDRAV
                     LLADTAAAGGR"
BASE COUNT          338 a          669 c          718 g          318 t
ORIGIN      
        1 cccgaagcgg acgcctcgac gtcccggtga tcggcgtcgc gaggggcggg tggaacctcg
       61 aacggctcag ggaacgggca cgggaggggg tggagcggaa cgggggtttc gaccgcgacg
      121 ccttcgaaaa attttcccgc cttctccgct acgtcggcgg cgactacgac gaccccgcca
      181 ccttcgtggc gctccggaag gaattgggcg gcgcgaaacg gccgcttttc tatctcgcga
      241 ttcctcccgc gctcttcggc accgtcatcg ggcgacttca cgacgccctc tgcgaccagg
      301 gcgcccgggt cgtcgtcgag aaaccgttcg gacgcgacct cctgtcggcc cgggagctga
      361 gccggatcct gcacctttgc ttcgacgaaa atcggatctt ccggatcgac cactatctgg
      421 ggaagaacgc cgtgcagaac ctgatctact tccgcttcgc gaacgccttt ctcgagccga
      481 tctggaaccg gaactatgtc cggtcggtcc agatcacgat ggccgagcag ttcggactgg
      541 aggggcgcgg ggcgttctac gagcaggcag gagcgatccg tgacgtggtg cagaatcaca
      601 tgttgcaggt gctcgcgaac gtggcgttgg agccgccggt ggggaacgag gacgtggagg
      661 ccctccggga cgaaaaggtg aaggtactga aagccatccc gccgctcgtt ccggcggatg
      721 tgatccgggg gcagttccgc gggtaccggg aggaaccggg ggtctcccct acctcgacgg
      781 tggagaccta cgcggcggtg cggatcgagg tccgctcgtg gcgatggcag ggggtgcctt
      841 tcttcatccg cgccgggaag cttctcccgg ggaatcgggt ggaggtcgtc gtgacgctgc
      901 gccgtccgcc tccgatcttc accggccccc tgccccccac cgtggcggcg attcccgggg
      961 cgaactacat ccggttccgc ctcggaccgg accttacgat cgccctgggc gcgatggtca
     1021 aacaccctgg agaggagttc gtcggcgacc gggtggaact gctggccagt caccagcccg
     1081 aggccgatga accggacgcc tacgagcagc tcctcgggga cgccttgcgg ggcgagacgt
     1141 tccggttcgc gcgggcagat tatgtcgaag aggcgtggcg gatcgtcgac ccggtcctga
     1201 aggcggaaac ccccctgttc ccgtacgaac ccggaacctg gggaccgggc gaggccgagg
     1261 cgctggtcgc tccggaacga tggcaagacc cggccccggc ggccgggccg ccagagtcac
     1321 cttgagaacc gagattcttc ccgacccggg aaccgtcgcg atacgggctg cggaacgaat
     1381 cgcgcagatt gcgagggaag cggtgacgga acggggccgg tgtgtcctgg cggtcagcgg
     1441 cggcacgacg ccgtggctgg cgttccgagc tctcgccggg gaggacgccc cctgggagcg
     1501 cgtccacctg ttccaggtcg acgaacgggt cgcgccttac ggagaaccgg agcgcaacta
     1561 cctccacctg aaggaggccc tcatcgatcg catccccatc ccccccgcca acgtccaccc
     1621 catgccggtg gaagaggagg atctcgacgc tgcggcacgc cgctacgaaa cgattcttcg
     1681 ccgggttgcc gggacgccgc cggttctcga cctcgtccag ctcggactgg gagaggacgg
     1741 ccacacggcc tccctcttcg cgggagaccc ggcatttcag gtcattgacg cggacgtcgc
     1801 cgtcagcggc ctgtacaagg gacgaaggcg gatgaccctc acctttccgg cgatcgatcg
     1861 ggcccggtgc atcctgtggc tggtcacggg gtctgggaag agcgcggcac tggagcgatt
     1921 atgcgcaggc gaccgatcga tcccggcggg acgcgttcga agcgaccgcg ccgtcctcct
     1981 ggccgacacg gcagccgcgg gaggccgata accgcgcacg gccggacttg ggggaggagg
     2041 cgc
//
